<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:59:07"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E321909" ref_strand="+" ref_description="SGN-E321909 [cTOB-29-A11]">
      <seq>aattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaaatgctttgtagttttctgaggttaatgattttacttctgtttcagttgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1711" stop="373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1411" g_stop="665" g_length="747"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="747" r_length="747" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E321909" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1411" e_stop="665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTGACCTTGTTC</genome_strand>
        <mrna_strand>AATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E370765" ref_strand="+" ref_description="SGN-E370765 [TUS-28-D14](-)">
      <seq>ggttgttgctcttcattacattcatagttgggccagaagaagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaaatgctttgtagttttctgaggttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1637" stop="397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1337" g_stop="702" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="636" r_length="636" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="640" polyA_stop="649"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E370765" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1337" e_stop="702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAG</genome_strand>
        <mrna_strand>GGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGAAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E226168" ref_strand="+" ref_description="SGN-E226168 [cLEL-31-M18](-)">
      <seq>gtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaaatgctttgtagttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1425" stop="409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1125" g_stop="702" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="425" polyA_stop="435"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E226168" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E226168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1125" e_stop="702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAG</genome_strand>
        <mrna_strand>GTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E226072" ref_strand="+" ref_description="SGN-E226072 [cLEL-31-M18](-)">
      <seq>tatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaaatgctttgtagtttcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1381" stop="408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1081" g_stop="702" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="380" polyA_stop="391"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E226072" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E226072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1081" e_stop="702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAG</genome_strand>
        <mrna_strand>TATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAG-TTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E377550" ref_strand="+" ref_description="SGN-E377550 [TUS-20-F21](-)">
      <seq>attcatagttgggccaaaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatttcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaaaatgcatgcaaaaatttttgtggtagtgagaaattttgataatagtgggaaaaaaattttggctatggtcatctttggcattactcaactttggggtttatttggtcaatcgacactttgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttaaaatttgggggcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttttttttttttcctgtaaaaatccggttgaaatatttaggtgtctttttataatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatttttagttttggcaaaggatgtatgttttgatacatgaagcttaaaagtgccgaaatgctttgttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1618" stop="413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1318" g_stop="715" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="608" polyA_stop="644"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E377550" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1318" e_stop="715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTT</genome_strand>
        <mrna_strand>ATTCATAGTTGGGCCAAAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATTTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAAATGCATGCAAAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAAAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTTTGGGGTTTATTTGGTCAATCGACACTTTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAAAATTTGGGGGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTTTTTTTTTTTCCTGTAAAAATCCGGTTGAAATATTTAGGTGTCTTTTTATAATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATTTTTAGTTTTGGCAAAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCCGAAATGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E349634" ref_strand="+" ref_description="SGN-E349634 [cTOS-1-N22]">
      <seq>aactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttangtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2019" stop="497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1719" g_stop="1615" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1614" i_stop="1416" i_length="199">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1415" g_stop="797" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="724" r_length="619" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E349634" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1719" e_stop="1615"/>
          <exon e_start="1415" e_stop="797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTT</genome_strand>
        <mrna_strand>AACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG.......................................................................................................................................................................................................ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTANGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E350878" ref_strand="+" ref_description="SGN-E350878 [cTOS-7-I16]">
      <seq>aactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2019" stop="508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1719" g_stop="1615" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1614" i_stop="1416" i_length="199">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1415" g_stop="808" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="713" r_length="608" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E350878" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1719" e_stop="1615"/>
          <exon e_start="1415" e_stop="808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCC</genome_strand>
        <mrna_strand>AACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG.......................................................................................................................................................................................................ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E258178" ref_strand="+" ref_description="SGN-E258178 [cLEG-49-E8]">
      <seq>tgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1591" stop="574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1291" g_stop="875" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E258178" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1291" e_stop="875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAA</genome_strand>
        <mrna_strand>TGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E293800" ref_strand="+" ref_description="SGN-E293800 [cLET-37-G2]">
      <seq>aaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttacaatttgggtgcacaggccctttgttacacttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1392" stop="630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1092" g_stop="930" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E293800" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>163</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1092" e_stop="930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTC</genome_strand>
        <mrna_strand>AAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTACAATTTGGGTGCACAGGCCCTTTGTTACACTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E243559" ref_strand="+" ref_description="SGN-E243559 [cLED-34-K17]">
      <seq>ttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgatcatgctattatgctgttacatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1943" stop="682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1643" g_stop="982" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E243559" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1643" e_stop="982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGT</genome_strand>
        <mrna_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGATCATGCTATTATGCTGTTACATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233233" ref_strand="+" ref_description="SGN-E233233 [cLED-6-K7]">
      <seq>ttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1943" stop="793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1643" g_stop="1093" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E233233" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1643" e_stop="1093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAG</genome_strand>
        <mrna_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E238131" ref_strand="+" ref_description="SGN-E238131 [cLED-22-D18]">
      <seq>ttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1943" stop="815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1643" g_stop="1115" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E238131" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1643" e_stop="1115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAG</genome_strand>
        <mrna_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E377551" ref_strand="+" ref_description="SGN-E377551 [TUS-20-F21]">
      <seq>gggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcntatttcaacttggagcggaagatgcatgcagaaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1945" stop="827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1646" g_stop="1127" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="521" r_length="521" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E377551" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1646" e_stop="1127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTA-TTCAACTTGGAGCGGAAGATGCATGCAGAAATTTT</genome_strand>
        <mrna_strand>GGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCNTATTTCAACTTGGAGCGGAAGATGCATGCAGAAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242150" ref_strand="+" ref_description="SGN-E242150 [cLED-37-F18]">
      <seq>ttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1943" stop="870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1643" g_stop="1170" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E242150" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1643" e_stop="1170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGAT</genome_strand>
        <mrna_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244502" ref_strand="+" ref_description="SGN-E244502 [cLED-38-E23]">
      <seq>ttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1943" stop="875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1643" g_stop="1175" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E244502" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1643" e_stop="1175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGC</genome_strand>
        <mrna_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E236002" ref_strand="+" ref_description="SGN-E236002 [cLED-16-I8]">
      <seq>ttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="1943" stop="934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1643" g_stop="1234" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E236002" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1643" e_stop="1234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATC</genome_strand>
        <mrna_strand>TTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E250334" ref_strand="+" ref_description="SGN-E250334 [cLEG-6-L24]">
      <seq>aaaaaacccagatagctagttttttgcaattatcatatagtattggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcattagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2142" stop="1009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1842" g_stop="1309" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E250334" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1842" e_stop="1309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCA-TAGTT</genome_strand>
        <mrna_strand>AAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATTAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264924" ref_strand="+" ref_description="SGN-E264924 [cLEG-71-L18]">
      <seq>ttttgagggggagatagcacggattttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttgcaattaattagactaaaaaaacccagatagctagttttttgcaattatcatatagtatatggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaattttgggtgtttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2362" stop="1157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2062" g_stop="1457" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="609" r_length="609" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E264924" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2062" e_stop="1457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTT-GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTAT-TGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTG-TTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTG</genome_strand>
        <mrna_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATATGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTTGGGTGTTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264619" ref_strand="+" ref_description="SGN-E264619 [cLEG-72-K17]">
      <seq>ttttgagggggagatagcacggattttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttgcaattaattagactaaaaaaacccagatagctagttttttgcaattatcatatagtattggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgctngtccttgatttgatttatgataaagcatgtgcagaacaaaaatctgaactattttgtggtgttgggagaacgtttccaactctgcacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2362" stop="1206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2062" g_stop="1506" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E264619" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2062" e_stop="1506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTT-GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTT-GGAGAACGTTTCCAACTCTGCACTTC</genome_strand>
        <mrna_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTNGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAAT-CTGAACTATTTTGTGGTGTTGGGAGAACGTTTCCAACTCTGCACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264780" ref_strand="+" ref_description="SGN-E264780 [cLEG-71-F19]">
      <seq>ttttgagggggagatagcacggattttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttgcaattaattagactaaaaaaacccagatagctagttttttgcaattatcatatagtattggtagtttgtgcagtccaggcataagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcctaataggctcggaattatggttgcttggattcctaataatagacctcacgtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtggtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2362" stop="1230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2062" g_stop="1530" g_length="533"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E264780" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2062" e_stop="1530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTT-GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGG</genome_strand>
        <mrna_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCCAGGCATAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCCTAATAGGCTCGGAATTATGGTTGCTTGGATTCCTAATAATAGACCTCACGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E250131" ref_strand="+" ref_description="SGN-E250131 [cLEG-4-H12]">
      <seq>gccgcccacccaaatgtaaggtacaggctaattatatagcatttgaactttgcaattaattagagtaaaaaaacccagatagctagttttttgcaattatcatatagtattggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgattcatgataaagcatgtgcagaacaaaaatactgaactaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2209" stop="1243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1909" g_stop="1543" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E250131" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1909" e_stop="1543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAA</genome_strand>
        <mrna_strand>GCCGCCCACCCAAATGTAAGGTACAGGCTAATTATATAGCATTTGAACTTTGCAATTAATTAGAGTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTCATGATAAAGCATGTGCAGAACAAAAATACTGAACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264763" ref_strand="+" ref_description="SGN-E264763 [cLEG-71-M14]">
      <seq>ttttgagggggagatagcacggattttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttgcaattaattagactaaaaaaacccagatagctagttttttgcaattatcatatagtatatggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagaacctcagtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2362" stop="1249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2062" g_stop="1549" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E264763" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2062" e_stop="1549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTT-GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTAT-TGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAG-ACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTG</genome_strand>
        <mrna_strand>TTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATATGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGAACCTCA-GTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262027" ref_strand="+" ref_description="SGN-E262027 [cLEG-58-N23]">
      <seq>tcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaattcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2776" stop="1277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2476" g_stop="1895" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1894" i_stop="1785" i_length="110">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1784" g_stop="1577" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="792" r_length="208" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E262027" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2476" e_stop="1895"/>
          <exon e_start="1784" e_stop="1577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA--TTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATG</genome_strand>
        <mrna_strand>TCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT..............................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E204642" ref_strand="+" ref_description="SGN-E204642 [cLEC-14-G20]">
      <seq>tggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2432" stop="1363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2132" g_stop="1890" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1889" i_stop="1785" i_length="105">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1784" g_stop="1663" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="365" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E204642" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2132" e_stop="1890"/>
          <exon e_start="1784" e_stop="1663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCAT</genome_strand>
        <mrna_strand>TGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG.........................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E213757" ref_strand="+" ref_description="SGN-E213757 [cLEC-76-E3]">
      <seq>ggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaattcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaanncactcaaatctagtgcactatctgtggacnaaatctactcggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2855" stop="1374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2555" g_stop="1895" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1894" i_stop="1785" i_length="110">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1784" g_stop="1674" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="772" r_length="111" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E213757" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2555" e_stop="1895"/>
          <exon e_start="1784" e_stop="1674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATT</genome_strand>
        <mrna_strand>GGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT..............................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAANNCACTCAAATCTAGTGCACTATCTGTGGACNAAATCTACTCGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E247760" ref_strand="+" ref_description="SGN-E247760 [cLEF-42-N17]">
      <seq>cagatgaatttgaattcttggcgttgttggatggatttccctgtgataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcaggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttaggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaattcaaggcagaagaagattatgaaagtgaacgttcaagattgaacatcgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2608" stop="1434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2308" g_stop="1895" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="415" r_length="415" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1894" i_stop="1785" i_length="110">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1784" g_stop="1734" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="466" r_length="51" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E247760" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2308" e_stop="1895"/>
          <exon e_start="1784" e_stop="1734"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTT-GGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATT</genome_strand>
        <mrna_strand>CAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTGATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCAGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTAGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT..............................................................................................................TCAAGGCAGAAGAAGATTATGAAAGTGAACGTTCAAGATTGAACATCGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E270883" ref_strand="+" ref_description="SGN-E270883 [cLEM-6-F9]">
      <seq>atctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2643" stop="1558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2343" g_stop="1858" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="486" r_length="486" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E270883" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2343" e_stop="1858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTG</genome_strand>
        <mrna_strand>ATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257149" ref_strand="+" ref_description="SGN-E257149 [cLEG-46-K21]">
      <seq>tcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2776" stop="1604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2476" g_stop="1904" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E257149" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2476" e_stop="1904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA--TTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCC</genome_strand>
        <mrna_strand>TCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E738815" ref_strand="+" ref_description="SGN-E738815 [LC15AC04]">
      <seq>agatatttttcttctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctatatatagcctgtaattagatagtttctccagtcattctagccttcttttccgccggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttccctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2985" stop="1632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2685" g_stop="1932" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="754" r_length="754" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E738815" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2685" e_stop="1932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCT</genome_strand>
        <mrna_strand>AGATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCCCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E255919" ref_strand="+" ref_description="SGN-E255919 [cLEG-35-N6]">
      <seq>gctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2778" stop="1633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2478" g_stop="1933" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="548" r_length="548" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E255919" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255919" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2478" e_stop="1933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA--TTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTC</genome_strand>
        <mrna_strand>GCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E212898" ref_strand="+" ref_description="SGN-E212898 [cLEC-73-N5]">
      <seq>ttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggattttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2703" stop="1645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2403" g_stop="1945" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E212898" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2403" e_stop="1945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTC</genome_strand>
        <mrna_strand>TTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA-TTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E370766" ref_strand="+" ref_description="SGN-E370766 [TUS-28-D14]">
      <seq>atctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgcgagtattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2643" stop="1687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2343" g_stop="1987" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E370766" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2343" e_stop="1987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTAT</genome_strand>
        <mrna_strand>ATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGCGAGTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205967" ref_strand="+" ref_description="SGN-E205967 [cLEC-20-E4]">
      <seq>cggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggattttttttttttggaccgggatctctcccctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2869" stop="1708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2569" g_stop="2008" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E205967" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2569" e_stop="2008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA-TTTTTTTTTTTGGCCCGGGATCTCTCCCCTCT</genome_strand>
        <mrna_strand>CGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTTGGACCGGGATCTCTCCCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264095" ref_strand="+" ref_description="SGN-E264095 [cLEG-64-C22]">
      <seq>taatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtacaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcataagcgtcgagagcaatacccataggaagttgctgttgtatgaaaatgtatataggtatacgtggggcataaaaaccctaatatcaggggtgatgtcccgttttaaattacccagttactgctctggcctttgccatgtcgggagcgcttgcatggcatgtccctatatttaatataaattggatttttcggggttttgatggggagatagcacagattttttttttttttgcccgggatctctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2773" stop="1729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2474" g_stop="2013" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E264095" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2474" e_stop="2013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA--TTTTTTTTTTTGGCCCGGGATCTCTCC</genome_strand>
        <mrna_strand>TAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTACAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCATAAGCGTCGAGAGCAATACCCATAGGAAGTTGCTGTTGTATGAAAATGTATATAGGTATACGTGGGGCATAAAAACCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCAGTTACTGCTCTGGCCTTTGCCATGTCGGGAGCGCTTGCATGGCATGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGATGGGGAGATAGCACAGATTTTTTTTTTTTTTGCCCGGGATCTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E547091" ref_strand="+" ref_description="SGN-E547091 [TUS-70-M17]">
      <seq>ctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctctatatatccttgtaattagatagtttctccagccattctagccttcttttcctccgggtaagtaacgtggattccttaagcagggttgttttgcccaaagtattgtcgatcaggtatgtacagcgtgatggctcggatgatccgcccctggttgtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtctttatacgtcttctcagggaatcttggctcagatggtgtagaggagagtcttgactcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtatagttggggcataaaagccctaatatcaggggtgatgtcccgttttaaattactctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2972" stop="1757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2672" g_stop="2054" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E547091" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.023" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2672" e_stop="2054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCC-TGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGG</genome_strand>
        <mrna_strand>CTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTCTATATATCCTTGTAATTAGATAGTTTCTCCAGCCATTCTAGCCTTCTTTTCCTCCGGGTAAGTAACGTGGATTCCTTAAGCAGG--G-T-----------T-GTTTTGCCCAAAGTATTGTCGATCAGGTATGTACAGCGTGATGGCTCGGATGATCCGCCCCTGGTTGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTTATACGTCTTCTCAGGGAATCTTGGCTCAGATGGTGTAGAGGAGAGTCTTGACTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGTTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACTCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E547090" ref_strand="+" ref_description="SGN-E547090 [TUS-70-M17](-)">
      <seq>ctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctctatatatccttgtaattagatagtttctccagccattctagccttcttttcctccgggtaagtaacgtggattccttaagcagggttgttttgcccaaagtattgtcgatcaggtatgtacagcgtgatggctcggatgatccccccctggttgtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtctttatacgtcttctcagggaatcttggctcagatggtgtagaggagagtcttgacttgtcatctcaaggaattttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtatagttggggcataaaagccctaatatcaggggtgatgtcccgttttaaattactctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtcccctatatttaatataaattggatttttcggggttttgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2972" stop="1757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2672" g_stop="2057" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="604" polyA_stop="642"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E547090" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2672" e_stop="2057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCC-TGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGT-CCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGA</genome_strand>
        <mrna_strand>CTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTCTATATATCCTTGTAATTAGATAGTTTCTCCAGCCATTCTAGCCTTCTTTTCCTCCGGGTAAGTAACGTGGATTCCTTAAGCAGG--G-T-----------T-GTTTTGCCCAAAGTATTGTCGATCAGGTATGTACAGCGTGATGGCTCGGATGATCCCCCCCTGGTTGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTTATACGTCTTCTCAGGGAATCTTGGCTCAGATGGTGTAGAGGAGAGTCTTGACTTGTCATCTCAAGGAATTTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGTTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACTCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E336702" ref_strand="+" ref_description="SGN-E336702 [cTOE-5-O13]">
      <seq>tagcctgttattagatagtttctccagtcattctagcggtgttttccgccggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtaaaaaggagtcttgatacgtcttcacaaggaatcttggctcacattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcatatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataagaagttgttgttgtatgaagatgtatagaggtatagggtggggcataaaaaccctaatatcaggggtgatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="2918" stop="1860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2618" g_stop="2160" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E336702" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2618" e_stop="2160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATA-GGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTC</genome_strand>
        <mrna_strand>TAGCCTGTTATTAGATAGTTTCTCCAGTCATTCTAGCGGTGTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAAAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCACATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCATATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAAGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGGTGGGGCATAAAAACCCTAATATCAGGGGTGATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E589154" ref_strand="+" ref_description="SGN-E589154 [42722]">
      <seq>tttttttcactaaaagagtacactattcatataaacagagaaggcttaatcttgaaattcaaagttaacttgctcaaaaatatcatctttctatactaactttttaatctacagagagcaatgaaattgaaattaagcacttatagaagaaagtacctaacagaaccaggacacataactgatttagtgccatgaagaaacagtcaaaaggggattatctttccaagccaaggagagaaacccaggtgcagaatcaattaatccaaatgatgaactataattatagttccaaagaagaatttttgcttgactcattgcatacatggctaagtgttactgatttaaaaccagccccttccattaattctctccaatgttctttatcttccatacattctcttctggttccgccgtcgtctaggcccaccgctccggcaattctcctgccaagtatcagtctttccacttgtactctctccggggagtctcgggtcaagctcggatccaacgactcgaaaactgttgagtagtatttcagtgcattcttaaaccgctgcaggaatcctacatcgttcaaattcacctcatactcacccaatgtcacaatgcttggattcaatgattttggctagactgagtgcagtttctacaccaacatttgtttcgtccagtaaattgtacagctgcaacatgaagttcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="15806" stop="17096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16117" g_stop="16796" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="702" r_length="683" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E589154" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16117" e_stop="16796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTATTCATATAAACAGAGAAGGCTTTAATCTTGAAATTCAAAGTTAAACTTGCTCAAAAATATCATCTTTCTATACTAACTTTTTAATCTACAGAGAGCAATGAAATTTAAATTTAAGCAC-T-TAGAAGAAAGTACCTAACAGAA-C-TGATGTAGAACACAATTAGTGCCATGAAGAAACAGTCAAAAGGGGATTATCTTTCCAAGCCAAGGAGAGAAACCCAGGGGCAGAATCAATTAATCCAAATGATGAACTATAATTATAGTTCCAAAGAAGAATTTTTGCTTGACTCATTGCATA-ATGGCTAAGTGTTACTGGTTTAAAACCAGCCCCTTCCATTAATTCTTTCCAATGTTCTTTATCTTCCATACATTCTCTTCTGGTTCCGCCATCGTCTAGGCCCACCGCTCCGGCAATTCTCCGGCCAAGTATCAGTCTTTCCACTTGTACTCTCTCAGCGGAGTCTCGGGTCAAGCTCGGATCCAATGACTCGAAAATAGTTGAGTAGTATTTCAGTGCGTTCTTAAATCGCTGCAGGAATCCAACATCATTCAAATTCACCTCATACTCACCCAATGTCACAATGCTTGGATTCAATGA-TTTGGCTAAACTCAGTGCAGTTTTTACACCAACATTTGTTTCGTCCAGTAAATTGTACAGCTGCAACATGAAGTTCACA</genome_strand>
        <mrna_strand>ACACTATTCATATAAACAGAGAAGGC-TTAATCTTGAAATTCAAAGTT-AACTTGCTCAAAAATATCATCTTTCTATACTAACTTTTTAATCTACAGAGAGCAATGAAATTGAAA-TTAAGCACTTATAGAAGAAAGTACCTAACAGAACCAGGACACATAACTGATTTAGTGCCATGAAGAAACAGTCAAAAGGGGATTATCTTTCCAAGCCAAGGAGAGAAACCCAGGTGCAGAATCAATTAATCCAAATGATGAACTATAATTATAGTTCCAAAGAAGAATTTTTGCTTGACTCATTGCATACATGGCTAAGTGTTACTGATTTAAAACCAGCCCCTTCCATTAATTCTCTCCAATGTTCTTTATCTTCCATACATTCTCTTCTGGTTCCGCCGTCGTCTAGGCCCACCGCTCCGGCAATTCTCCTGCCAAGTATCAGTCTTTCCACTTGTACTCTCTCCGGGGAGTCTCGGGTCAAGCTCGGATCCAACGACTCGAAAACTGTTGAGTAGTATTTCAGTGCATTCTTAAACCGCTGCAGGAATCCTACATCGTTCAAATTCACCTCATACTCACCCAATGTCACAATGCTTGGATTCAATGATTTTGGCTAGACTGAGTGCAGTTTCTACACCAACATTTGTTTCGTCCAGTAAATTGTACAGCTGCAACATGAAGTTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746165" ref_strand="+" ref_description="SGN-E746165 [GI|47104889]">
      <seq>ggggggctactctgttagtccactcaaaacttgctcaccaatttcttcttataactgttgttgttgaggtaatgtgtgagtagtgtagcttagtaagatttggtgtggagaatggcctatatgtgtacggacagtgggaatctaatggcaattgctcagcaagtcataaagcaaaagcagcagcaggagcagctccaacagcaagagcaacagcagcagcagcaacaacaattcttgggtgttaatcctttgtgtctcagcccatggacttccaatcaccagaccttaactaatagccccactttaggatatggacttaccgggtcgggttttgcagacccatttcaggtcgccggaggaacagatagcgccgagccgggatttcagttccctaacttggaacatcattcgaccgggtttaggtttgctgatttcggcggtggaccgggtggtgagtttgactcagatgagtggatggagagcttgataggcggcggagattctaccggaagctctaatcttcaatctggttgcgaagcctggcagacgagttccgaattcactaccctctacggagatccgttcccgagttgtccgaatcgactcagtatcggttctgctcctccgcctccaccttcttccgatctcaatggggtcattttttcggaaacccagaaaaatctaagcccactacaaccacagacatctccatgggtcgcaccatcttcatctcctcctccaattgttcaacccgcgagcaaagaatccaaggtggtatcagttgatgtgcagccatgtagttcccctgaaagtttttcgtcaaaaccattgttgaaatccttggtggaatgtgcaagactcgctgaatcagagcctgaaaatgtagtaaaatcactgattcgactaagggaatcagtttcccaacaaggagatccaatggagcgagttgggttctatttcttagaagctctttacaataggctttcgtcgtgtcaagcagagagaactccgtcaatctttggtactgcgccggaggagctcactttgtcatacaaagcctttaatgatgcatgtccctactcaaagtttgctcacttaacggctaatcaggcgattcttgaagcaactgaaaaagcaacgaggattcacattgtagattttggaattgttcatggtatccaatgggcagcttttttacaagctttagcaactagatcagctggtaaaccagtcagtgttagaatctctggcattccatcagtggtattgggtaactctccgtcagcttcacttttagctacagggaatcgtcttcgtgacttcgcgaagcttctggatcttaacttcgaattcgaaccaatattgactccagttcaggaacttaacgggtctagttttcgagttgatccagatgaaatcttagctgtgaacttcatgttgcagctgtacaatttactggacgaaacaaatgttggtgtaaaaactgcactgagtttagccaaatcattgaatccaagcattgtgacattgggtgagtatgaggtgaatttgaatgatgttggattcctgcagcgatttaagaacgcactgaaatactactcaactattttcgagtcattggatccgagcttgacccgagactccgctgagagagtacaagtggaaagactgatacttggccggagaattgccggagcggtgggcctagacgatggcggaaccagaagagaatgtatggaagataaagaacattggaaagaattaatggaaggggctggttttaaaccagtaacacttagccattatgcaatgagtcaagcaaaaattcttctttggaactataattatagttcatcatttggattaattgattctgcccctgggtttctctccttggcttggaaagataatccccttttgactgtttcttcatggcactaattgtgttctacatcagttctgttaggtactttcttctaagtgcttaaatttaaatttcattgctctctgtagattaaaaagttagtatagaaagatgatatttttgagcaagtttaactttgaattccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="18518" stop="15843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18220" g_stop="16137" g_length="2084"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2084" r_length="2084" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E746165" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>2084</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18220" e_stop="16137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTTCAAGATTAAAGCCTTC</genome_strand>
        <mrna_strand>GGGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCACTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTCCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E554527" ref_strand="+" ref_description="SGN-E554527 [cTSC-4-J17]">
      <seq>caagactcgctgaatcagagcctgaaaatgtagtaaaatcattgattcgactaagggaatcagtttcccaacaaggagatccaatggagcgagttgggttctatttcttagaagctctttacaataggctttcgtcgtgtcaagcagagagaactccgtcaatctttggtactgcgccggaggagctcactttgtcatacaaagcctttaatgatgcatgtccctactcaaagtttgctcacttaacggctaatcaggcgattcttgaagcaactgaaaaagcaacgaggattcacattgtagattttggaattgttcatggtatccaatgggcagcttttttacaagctttagcaactagatcagctggtaaaccagtcagtgttagaatctctggcattccatcagtggtattgggtaactctccgtcagcttcacttttagctacagggaatcgtcttcgtgacttcgcgaagcttctggatcttaacttcgaattcgaaccaatattgactccagttcaggaacttaacgggtctagttttcgagttgatccagatgaaatcttagctgtgaacttcatgttgcagctgtacaatttactggacgaaacaaatgttggtgtaaaaactgcactgagtttagccaaatcattgaatccaagcattgtgacattgggtgagtatgaggtgaatttgaatgatgttggattcctgcagcgatttaagaacgcactgaaatactactcaactattttcgagtcattggatccgagcttgacccgagactccgctgagagagtacaagtggaaagactgatacttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="17667" stop="16241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17367" g_stop="16541" g_length="827"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="827" r_length="827" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E554527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E554527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17367" e_stop="16541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGC</genome_strand>
        <mrna_strand>CAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E580663" ref_strand="+" ref_description="SGN-E580663 [5906]">
      <seq>gtatcattgatgtgctgcccggtatttcccctggaaagtttttcttcaaaccattgttgaaatccttgggtggaatgtgcagactcgctgaatcaagcctgaaatgtataaatctttgattcgacttaggaatcagtttcccaacaaggagatccatggagcgagttgggttctatttcttagaagctctttacaatgggctgtcgtcgtgtcaagcagaaagaactccgtcaatctttggtactacggccggaggagctcactttgtcatacaaagcctttaatgatgcatgtccctactcaaagtttgctcacttaacggctaatcaggcgattcttgaagcaactgaaaaagcaacgaggattcacattgtaattttggaattgttcatgggtatccaatggggctgcttttttacaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="17746" stop="16720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17446" g_stop="17020" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E580663" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E580663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17446" e_stop="17020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCAGTTGATGTGCAGCCATGTAGTTCCCCT-GAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTT-GGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGC-GCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCAT-GGTATCCAAT-GGGCAGCTTTTTTACAAG</genome_strand>
        <mrna_strand>GTATCA-TTGATGTGCTGCCCGGTATTTCCCCTGGAAAGTTTTTCTTC-AAACCATTGTTGAAATCCTTGGGTGGAATGTGC-AGACTCGCTGAATCA-AGCCTG-AAATGTA-T-AAATCTTTGATTCGACTTA-GGAATCAGTTTCCCAACAAGGAGATCC-ATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATGGGCTGTCGTCGTGTCAAGCAGAAAGAACTCCGTCAATCTTTGGTACTACGGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTA-ATTTTGGAATTGTTCATGGGTATCCAATGGGGCTGCTTTTTTACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E452238" ref_strand="+" ref_description="SGN-E452238 [cSTS-16-I7]">
      <seq>attcgaccgggtttaggtttgctgatttcggcggtggaccgggtggtgaagtttgactcagatgagtggatggagagcttgataggcggcggagattctaccggaagctctaatcttcaatctggttgcgaagcctggcagacgagttccgaattcactaccctatacggagatccgttctcgagttgtccgaatcgtctcagtatcggttcttctcctccgcctccgccttcttccgatctgaatggggtcattttttcggaaacccagaaaaatctaaactcactacaaccacagacatctccgtgggtcgcaccatcttcatctcctcctccaattgttcaacccgtgtgtaaagaatccaaggtggtatcagttgatgtgctgccctgtagttcccctgaaagtttttcttcaaaaccattgttgaaatccttggtggaatgtgcaagactcgctgaatcagagcctgaaaatgtagtaaaatctttgattcgacttagggaatcagtttcccaacaaggagatccaatggagcgagttgggttctatttcttagaagctctttacaatgggctgtcgtcgtgtcaagcagaaagaactccatcaatctttggtactacgccggaggagctcactttgtcatacaaagcctttaatgatgcatgtccctactcaaagtttgctcacttaacggctaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="18114" stop="16813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17814" g_stop="17113" g_length="702"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E452238" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E452238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17814" e_stop="17113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTG-AGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATC</genome_strand>
        <mrna_strand>ATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTATACGGAGATCCGTTCTCGAGTTGTCCGAATCGTCTCAGTATCGGTTCTTCTCCTCCGCCTCCGCCTTCTTCCGATCTGAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAACTCACTACAACCACAGACATCTCCGTGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGTGTGTAAAGAATCCAAGGTGGTATCAGTTGATGTGCTGCCCTGTAGTTCCCCTGAAAGTTTTTCTTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCTTTGATTCGACTTAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATGGGCTGTCGTCGTGTCAAGCAGAAAGAACTCCATCAATCTTTGGTACTACGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E483961" ref_strand="+" ref_description="SGN-E483961 [cSTE-11-H13]">
      <seq>gtccactcaaaacttgctcaccagtttcttccgataactgttgttattgaggtaatgtgtgagtagcgtagctcagcaagatttggtgtggagaatggcctatatgtgtacggacagtggaaatctaatggcaatcgctcagcaagtcataaagcaaaagcagcagcaggagcacctccaacagcaagaacaacagcagcagcagcagcaacaacaattcttgggtgttaatcctttgtgtctcagcccatggacttccaaccctcatcagaccttaactaatagtcccactttaggatatggacttaccgggtcgggttttgcagacccatttcaggtcgccggaggaacagatggcggcgagccgggatttcagttccctaacttggaacatcattcgaccgggtttaggtttgctgatttcggcggtggaccgggtggtgaatttgacacagatgagtggatggagagcttgataggcggcggagattctaccggaagctctaatcttcaatctggttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="18503" stop="17387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18203" g_stop="17687" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E483961" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18203" e_stop="17687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGC-A-A-CAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAA---TCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGC</genome_strand>
        <mrna_strand>GTCCACTCAAAACTTGCTCACCAGTTTCTTCCGATAACTGTTGTTATTGAGGTAATGTGTGAGTAGCGTAGCTCAGCAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGAAATCTAATGGCAATCGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCACCTCCAACAGCAAGAACAACAGCAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAACCCTCATCAGACCTTAACTAATAGTCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATGGCGGCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAATTTGACACAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E337091" ref_strand="+" ref_description="SGN-E337091 [cTOE-7-G20]">
      <seq>taaggctgagcttttctcaattaaagctaagcacttctaacccccttttcaactctctccctcttcttggggctactctgttagtccactcaaaacttgctcaccaatttcttcttataactgttgttgttgaggtaatgtgtgagtagtgtagcttagtaagatttggtgtggagaatggcctatatgtgtacggacagtgggaatctaatggcaattgctcagcaagtcataaagcaaaagcagcagcaggagcagctccaacagcaagagcaacagcagcagcagcaacaacaattcttgggtgttaatcctttgtgtctcagcccatggacttccaatcaccagaccttaactaatagccccactttaggatatggactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="18586" stop="17603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18286" g_stop="17903" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E337091" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18286" e_stop="17903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTT</genome_strand>
        <mrna_strand>TAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E547448" ref_strand="+" ref_description="SGN-E547448 [TUS-71-F9]">
      <seq>cccaccccaacccctatccccatacaccagtggttatcttcttccccatcattctaatgatttcaaaattcttagtatcagtggttatcttcttcccccaccattctaatggtttcaaaattcttagcattttgtttcatttataaatttttcgaagagattcttttccccatctttctctacctaaaaaacgagatgaagtaaaaagttataattaataaaagctgatgaaaaaaaaatttgtagggttaaagatagaactgtacagggagggggggtcgccattaatggagttaaagaaaatgtatgttttgttccagttgaaggcagggaggtgtttaggttttactttttttttaaattttttttactttaaaataatttttattttttttactttataatataatgtttaaataattttttggattaaaaaataacacatgtcattatttgattggtcaaattgacatgtcagcgcgagtgtatttcacacattctctattttttgtttattctcgaaaaaatgttcaaatgattcaaattcagaatggttgaagtgttcaataggtagtacgtctagttgaggtgtctaaatgaataatcgggacaagtttgagtgggcgcatatgactttgggctattttattctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="25947" stop="24707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25647" g_stop="25012" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E547448" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25647" e_stop="25012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCATCCCAACCCCCATACTCATACACAAGTGGTTATCTTCTTCCCCATCATTCTAATGATTTCAAAAATTTTAGTATCAGTGGTTATCTTCTTCCCCCAACATTCTAATGGTTTCAAAATTCTTAGCATTTTGTTTCATTTATAATTTTTTCGAAGAGATTCTTTTCCCCATTTTTCTCTACC-AAAAAAAGAGATGAAGTAAAAAGTTATAATTAATAAAA-AAATTGATAAAAAAA-TTGTCGGATTAAAGATGGAACTGTACAGAGAGGGGAAGGTAGTCATTAATGGAGTTAGAGGAAATGTATGTTTTGTTCCCGTTGAAGGCA-GG-GTAGTTTAGGTTTTACTTTTTTTTTATTCATTTTTTTTACTTTAATATAATTTTTATTTGTTTTACTTTATAATATAATGTTTAAATAATGTTTTGGATTAGAAAATAACACATGTCATTATTTGATTGGTCAAATTGACATGTCAGCGCGAGTGAATTTCACACATACTCTATTTTTTGTTTATTCTCAAAAAAATGTTCAAATGGTTGAAATTCAGAATAGTTGAAGTGTTCAATAGGTAGTACGTCTAGTTAAGGTGTCTAAATGAATAATCGGGACAAGTTTGAGGGGCCGCATATGACTTTG</genome_strand>
        <mrna_strand>CCCACCCCAACCCCTATCCCCATACACCAGTGGTTATCTTCTTCCCCATCATTCTAATGATTTCAAAATTCTTAGTATCAGTGGTTATCTTCTTCCCCCACCATTCTAATGGTTTCAAAATTCTTAGCATTTTGTTTCATTTATAAATTTTTCGAAGAGATTCTTTTCCCCATCTTTCTCTACCTAAAAAACGAGATGAAGTAAAAAGTTATAATTAATAAAAGCTGATGAAAAAAAAATTTGTAGGGTTAAAGATAGAACTGTACAGGGAGGGG-GGGTCGCCATTAATGGAGTTAAAGAAAATGTATGTTTTGTTCCAGTTGAAGGCAGGGAGGTGTTTAGGTTTTACTTTTTTTTTA--AATTTTTTTTACTTTAAAATAATTTTTATTTTTTTTACTTTATAATATAATGTTTAAATAATTTTTTGGATTAAAAAATAACACATGTCATTATTTGATTGGTCAAATTGACATGTCAGCGCGAGTGTATTTCACACATTCTCTATTTTTTGTTTATTCTCGAAAAAATGTTCAAATGATTCAAATTCAGAATGGTTGAAGTGTTCAATAGGTAGTACGTCTAGTTGAGGTGTCTAAATGAATAATCGGGACAAGTTTGAGTGGGCGCATATGACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E578187" ref_strand="-" ref_description="SGN-E578187 [LE12AD01]">
      <seq>aaagatgctgggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggttgcaataaatcgcgaaaattgtgaaattttggtaataactgtttgatttatttgtgcgatgaattgtaagcagcctgtgaagtgttcataaatattagaagcagaacaccgtttgtcttgtaatcaggaagcaaggcttcctgacttttcgatcttgtagaagatgatggaatcacttgtttatgctcttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="31809" stop="25649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31509" g_stop="31362" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="217" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="338" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="376" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29775" g_stop="29426" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="726" r_length="350" r_score="0.997"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29425" i_stop="29357" i_length="69">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.921" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29356" g_stop="29343" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="727" r_stop="740" r_length="14" r_score="0.643"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E578187" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578187" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31509" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29426"/>
          <exon e_start="29356" e_stop="29343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTACCCTGGTTTTTTCATTTTCTAGAAAAACTAAGCAAG</genome_strand>
        <mrna_strand>AAAGATGCT-GGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTAAA.....................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E311763" ref_strand="+" ref_description="SGN-E311763 [cLEZ-9-G24]">
      <seq>tttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggttgcaataaatcgcgaaaattgtgaaattttggtaataactgtttgatttatttgtgcgatgaattgtaagcagcctgtgaagtgttcataaatattagaagcagaacaccgtttgtcttgtaatcaggaagcaaggcttcctgacttttcgatcttgtagaagatgatggaatcacttgtttatgctcttatatactctacttcttgcattttgacacgattgaagacattatctcattaccctggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="31346" stop="29073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31142" g_stop="31134" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="130" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="168" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29775" g_stop="29374" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="570" r_length="402" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="572" polyA_stop="582"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E311763" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31142" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTACCCTG</genome_strand>
        <mrna_strand>TTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTACCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E230518" ref_strand="+" ref_description="SGN-E230518 [cLEL-35-B15](-)">
      <seq>agtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggttgcaataaatcgcgaaaattgtgaaattttggtaataactgtttgatttatttgtgcgatgaattgtaagcagcctgtgaagtgttcataaatattagaagcagaacaccgtttgtcttgtaatcaggaagcaaggcttcctgacttttcgatcttgtagaagatgatggaatcacttgtttatgctcttatatactccacttcttgcattttgacncgattgaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="30036" stop="23693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29736" g_stop="29379" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E230518" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29736" e_stop="29379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTA</genome_strand>
        <mrna_strand>AGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCCACTTCTTGCATTTTGACNCGATTGAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E702050" ref_strand="+" ref_description="SGN-E702050 [FA17CF09]">
      <seq>aagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggttgcaataaatcgcgaaaattgtgaaattttggtaataactgtttgatttatttgtgcgatgaattgtaagcagcctgtgaagtgttcataaatattagaagcagaacaccgtttgtcttgtaatcaagaagcaagggcttcctgacttttcgatcttgtagaaaatgatggaatcacttgtttatgctcttatatactctacttcttgcattttgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32019" stop="29102"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31719" g_stop="31606" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="285" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="355" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="476" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="514" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29775" g_stop="29391" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="900" r_length="386" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E702050" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>899</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31719" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAA-GGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGAC</genome_strand>
        <mrna_strand>AAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAAGAAGCAAGGGCTTCCTGACTTTTCGATCTTGTAGAAAATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E402382" ref_strand="+" ref_description="SGN-E402382 [PPC-7-F19]">
      <seq>gaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggctgcaataaatcgcccaaattgtgaaattttggtaataactgttgatttatttgtgtgatgatttgtaagcagcctgtgaagtgttcataatattagaagcagaacaccgttttcgatcttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="30027" stop="29202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29727" g_stop="29505" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="232" polyA_stop="241"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E402382" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29727" e_stop="29505"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTT</genome_strand>
        <mrna_strand>GAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGCTGCAATAAATCGCCCAAATTGTGAAATTTTGGTAATAACTG-TTGATTTATTTGTGTGATGATTTGTAAGCAGCCTGTGAAGTGTTCAT-AATATTAGAAGCAGAACACCGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E432880" ref_strand="+" ref_description="SGN-E432880 [STM-57-N23]">
      <seq>catccttttttacaagatcgaaaacggtgttctgcttctaatattatgaacacttcacaggctgcttacaaatcatcacacaaataaatcaacagttattaccaaaatttcacaatttgggcgatttattgcagccttccttattatcaacttctacgccatccaaatccccctataaatgagtatatcagtagacacgagcctttggtgggaacgactcgacttcgtcatctagagtgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="29202" stop="30027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29505" g_stop="29727" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="242" r_length="221" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E432880" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E432880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29505" e_stop="29727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGGTGTTCTGCTTCTAATATTTATGAACACTTCACAGGCTGCTTACAATTCATCGCACAAATAAATCAAACAGTTATTACCAAAATTTCACAATTTTCGCGATTTATTGCAACCTTCCTTATTATCAACTTCTACGCCATCCAAATCCCCCTATAAATGAGTATATCAGTAGACACGAGCCTTTGGTGGGAACGACTCGACTTCGTCATCTAGAGTGTTC</genome_strand>
        <mrna_strand>AAACGGTGTTCTGCTTCTAATA-TTATGAACACTTCACAGGCTGCTTACAAATCATCACACAAATAAATC-AACAGTTATTACCAAAATTTCACAATTTGGGCGATTTATTGCAGCCTTCCTTATTATCAACTTCTACGCCATCCAAATCCCCCTATAAATGAGTATATCAGTAGACACGAGCCTTTGGTGGGAACGACTCGACTTCGTCATCTAGAGTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E432879" ref_strand="+" ref_description="SGN-E432879 [STM-57-N23]">
      <seq>gaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggctgcaataaatcgcccaaattgtgaaattttggtaataactgttgatttatttgtgtgatgatttgtaagcagcctgtgaagtgttcataatattagaagcagaacaccngttttcgatcttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="30027" stop="29202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29727" g_stop="29509" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="233" polyA_stop="242"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E432879" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E432879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29727" e_stop="29509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACC</genome_strand>
        <mrna_strand>GAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGCTGCAATAAATCGCCCAAATTGTGAAATTTTGGTAATAACTG-TTGATTTATTTGTGTGATGATTTGTAAGCAGCCTGTGAAGTGTTCAT-AATATTAGAAGCAGAACACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E714095" ref_strand="+" ref_description="SGN-E714095 [FB10CA08]">
      <seq>ctctcaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaaagtgataataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32217" stop="29326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31918" g_stop="31895" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="199" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="370" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="440" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="561" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="599" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29775" g_stop="29626" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="749" r_length="150" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E714095" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31918" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAA</genome_strand>
        <mrna_strand>CTCTCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAAGTGATAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E327077" ref_strand="-" ref_description="SGN-E327077 [cTOC-18-D20]">
      <seq>aaaaacggggatgatccagatgctgtgatccctggactgatggctgctgtgaaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgtngttttnggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32071" stop="29337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31771" g_stop="31606" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="337" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="407" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="528" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="566" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29775" g_stop="29637" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="705" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E327077" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327077" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31771" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAA</genome_strand>
        <mrna_strand>AAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGTGAAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTNGTTTTNGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E444836" ref_strand="+" ref_description="SGN-E444836 [cSTA-44-K17]">
      <seq>ctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggtgaggaacagaagccacttgaaaaggatgctggagagaggaccatcgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaatataaggctgaacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaaccttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacataccataggattttgggaagacgagaaagttcggctagaatacagaccagtgcatatgaacactctagantgacgaagtcgagtcgttcccaccaagggctcgtgtctactgatacactcatttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="31971" stop="29360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31671" g_stop="31606" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="237" r_length="171" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="307" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="428" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="466" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29775" g_stop="29660" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="583" r_length="117" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E444836" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31671" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGA-TGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTAT</genome_strand>
        <mrna_strand>CTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GTGAGGAACAGAAGCCACTTGAAAAGGATGCTGGAGAGAGGACCATCGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAATATAAGGCTGAACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAACCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACATACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGAAGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGANTGACGAAGTCGAGTCGTTCCCACCAAGGGCTCGTGTCTACTGATACACTCATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E709857" ref_strand="+" ref_description="SGN-E709857 [FA53BH04]">
      <seq>cggttgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactagttaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacccaccataggatattgggaggacgagaaagttcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32389" stop="29451"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32092" g_stop="31895" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="372" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="543" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="613" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="734" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="735" r_stop="772" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29775" g_stop="29751" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="773" r_stop="797" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E709857" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32092" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
          <exon e_start="29775" e_stop="29751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGG</genome_strand>
        <mrna_strand>CGGTT-GTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAGTTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACCCACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E256554" ref_strand="+" ref_description="SGN-E256554 [cLEG-38-E14]">
      <seq>tagtgtgatctcacaagtggaatttggaaaggtggggtgtatgcagaccttacgccgaccttgttgaggtagaaaagtagtttctgacagatcctcggctcaagaaaagcatgatctaaaactgatctgacaaatactaaaataaaagctatagtgaaaattttatggaaatgagaagtaggggcaacaaaaacaataaagatagcctcagtaaaagagacaacaacaaaaatagctgaaaaactgaagaataggataataataataataattctgataagagggagcaaacaaggtgctctaagctagtagcctggaaccatgctctcccgtgggaaagagagaaattgcttgattacctactaaccccctctaccctgccttcatgttttcccatctttggtcatgttctcaatgagctgaagatgtgttatattatgtcttaattgtatctccccaattctttttcggtctacctctacctcttgttgggcccatcactggcagcctctctcaagtctcacctcttcattggaacttttgtgttccttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="30919" stop="29766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30619" g_stop="30066" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E256554" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30619" e_stop="30066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTC</genome_strand>
        <mrna_strand>TAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAATAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTATCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348802" ref_strand="+" ref_description="SGN-E348802 [cTOF-29-O16]">
      <seq>ggttggtgcaggcggtgcctgggcttcgtgccgcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagncatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaaccaccataggatattggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="35782" stop="30490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35482" g_stop="35368" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="204" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="351" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="493" r_length="142" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33614" g_stop="33529" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="579" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33439" g_stop="33382" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="637" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33381" i_stop="30939" i_length="2443">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="30938" g_stop="30919" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="657" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="694" r_length="37" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E348802" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348802" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35482" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33529"/>
          <exon e_start="33439" e_stop="33382"/>
          <exon e_start="30938" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGGTGCAGGCGGTG-CTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAG-CATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG</genome_strand>
        <mrna_strand>GGTTGGTGCAGGCGGTGCCTGGGCTTCGTGCCGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGNCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAAC-CACCATAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E471163" ref_strand="+" ref_description="SGN-E471163 [cSTB-23-C19]">
      <seq>gatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggtgaggaacagaagccacttgaaaaggatgctggagagaggaccatcgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaatataaggctgaacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgataaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaaccttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacataccatangattttggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="31963" stop="30491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31663" g_stop="31606" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="229" r_length="171" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="299" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="420" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30830" g_stop="30793" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="458" r_length="38" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E471163" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E471163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31663" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG</genome_strand>
        <mrna_strand>GATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GTGAGGAACAGAAGCCACTTGAAAAGGATGCTGGAGAGAGGACCATCGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAATATAAGGCTGAACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGATAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAACCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACATACCATANG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E444837" ref_strand="+" ref_description="SGN-E444837 [cSTA-44-K17]">
      <seq>ctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggtgaggaacagaagccacttgaaaaggatgctggagagaggaccatcgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaatataaggctgaacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaaccttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="31971" stop="30508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31671" g_stop="31606" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="237" r_length="171" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="307" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31039" g_stop="30919" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="428" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30830" g_stop="30808" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="451" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E444837" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31671" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30919"/>
          <exon e_start="30830" e_stop="30808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGAT</genome_strand>
        <mrna_strand>CTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GTGAGGAACAGAAGCCACTTGAAAAGGATGCTGGAGAGAGGACCATCGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAATATAAGGCTGAACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAACCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E704284" ref_strand="+" ref_description="SGN-E704284 [FA23DE01]">
      <seq>gcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33241" stop="30631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32941" g_stop="32841" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="289" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="464" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="635" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="705" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="31039" g_stop="30931" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="814" r_length="109" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E704284" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32941" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGT</genome_strand>
        <mrna_strand>GCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E702152" ref_strand="+" ref_description="SGN-E702152 [FA17DG07]">
      <seq>tataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagcatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttattaatgcatgcatcaccatgcactcagccgaggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="35124" stop="30661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34824" g_stop="34742" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="230" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="371" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33614" g_stop="33529" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="457" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33439" g_stop="33347" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="550" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="614" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="32984" g_stop="32887" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="712" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="32886" i_stop="31174" i_length="1713">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="31173" g_stop="31134" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="713" r_stop="752" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="31039" g_stop="30961" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="753" r_stop="830" r_length="78" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E702152" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>831</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34824" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33529"/>
          <exon e_start="33439" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32887"/>
          <exon e_start="31173" e_stop="31134"/>
          <exon e_start="31039" e_stop="30961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCA</genome_strand>
        <mrna_strand>TATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTT-ATTAATGCATGCATCACCATGCACTCAGCCGAGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E454476" ref_strand="+" ref_description="SGN-E454476 [cSTS-23-M20]">
      <seq>tttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtgactaaggagccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaaaggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgtgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggtgaggaacagaagccacttgaaaaggatgctggagagaggaccatcgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaatataaggctgaacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaaccttttaattaatgcatgcatcaccatgcactcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32378" stop="30668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32078" g_stop="31895" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="359" r_length="175" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="530" r_length="171" r_score="0.953"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="600" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31039" g_stop="30968" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="672" r_length="72" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E454476" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32078" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGC</genome_strand>
        <mrna_strand>TTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTGACTAAGGAGCCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAAAGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGTGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GTGAGGAACAGAAGCCACTTGAAAAGGATGCTGGAGAGAGGACCATCGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAATATAAGGCTGAACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAACCTTTTAATTAATGCATGCATCACCATGCACTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E252765" ref_strand="+" ref_description="SGN-E252765 [cLEG-16-B16]">
      <seq>ctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32304" stop="30671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32004" g_stop="31895" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="285" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="456" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="526" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31039" g_stop="30971" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="595" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E252765" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32004" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTC</genome_strand>
        <mrna_strand>CTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E324844" ref_strand="+" ref_description="SGN-E324844 [cTOC-11-I10]">
      <seq>aaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32070" stop="30672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31770" g_stop="31606" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31532" g_stop="31362" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="336" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31203" g_stop="31134" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="406" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31039" g_stop="30972" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="474" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E324844" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324844" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31770" e_stop="31606"/>
          <exon e_start="31532" e_stop="31362"/>
          <exon e_start="31203" e_stop="31134"/>
          <exon e_start="31039" e_stop="30972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACT</genome_strand>
        <mrna_strand>AAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E280540" ref_strand="+" ref_description="SGN-E280540 [cLER-1-C20]">
      <seq>ggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33232" stop="31081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32932" g_stop="32841" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="280" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="455" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31532" g_stop="31381" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="607" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E280540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32932" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACA</genome_strand>
        <mrna_strand>GGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E701492" ref_strand="+" ref_description="SGN-E701492 [FA16AE06]">
      <seq>cttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgccaaacaatgctgctgtcttccgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33871" stop="31083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33571" g_stop="33529" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33439" g_stop="33347" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="136" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="200" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32984" g_stop="32841" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="344" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="532" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="707" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="31532" g_stop="31383" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="708" r_stop="857" r_length="150" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E701492" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>857</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33571" e_stop="33529"/>
          <exon e_start="33439" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCA</genome_strand>
        <mrna_strand>CTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCCAAACAATGCTGCTGTCTTCCGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E479762" ref_strand="+" ref_description="SGN-E479762 [cSTD-11-A14]">
      <seq>cactaaaaaagggatgatccatatgctgtgatccctggactgatggctgctggtgaagcagcatgtgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgctgtttttggacgggcatgtgctaatacggttgcagagatccaaaaaccaggttagagaatttggttatataacctttaggcatgcataacatgtttaagagttctgaactttcattcctgcacgtgaggaacagaagccacttgaaaaggatgctggagagaggaccatcgcatggttggacaagattaagaactccaatggttcattgcccacctcaaatatgaggctgaacatgcaaagagttatgccaaacaatgctgctgtcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="32075" stop="31087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31775" g_stop="31387" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E479762" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31775" e_stop="31387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTC</genome_strand>
        <mrna_strand>CACTAAAAA-AGGGATGATCCATATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGTGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGCTGTTTTTGGACGGGCATGTGCTAATACGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGGTTATATAACCTTTAGGCATGCATAACATGTTTAAGAGTTCTGAACTTTCATTCCTGCACGTGAGGAACAGAAGCCACTTGAAAAGGATGCTGGAGAGAGGACCATCGCATGGTTGGACAAGATTAAGAACTCCAATGGTTCATTGCCCACCTCAAATATGAGGCTGAACATGCAAAGAGTTATGCCAAACAATGCTGCTGTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E706512" ref_strand="+" ref_description="SGN-E706512 [FA30AF12]">
      <seq>ggttgcctcattactgaaggatctcccggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttcccgatctatgactatggaaattccagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgcctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattacgaactccaatggttccttgcccacctcaaagataaggctggacatgcccagagttatgcaaaacaatgctgctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33506" stop="31091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33206" g_stop="33188" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32984" g_stop="32841" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="163" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="0.96"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="351" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="527" r_length="176" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31532" g_stop="31391" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="669" r_length="142" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E706512" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33206" e_stop="33188"/>
          <exon e_start="32984" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTG-CTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGT</genome_strand>
        <mrna_strand>GGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCCCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCCGATCTATGACTATGGAAATTCCAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTACGAACTCCAATGGTTCCTTGCCCACCTCAAAGATAAGGCTGGACATGCCCAGAGTTATGCAAAACAATGCTGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E699914" ref_strand="+" ref_description="SGN-E699914 [FA11CC12]">
      <seq>cccccgttcttgcctcaagagatgttgtttccagatctatgactatcgaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgcgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaacccacgcgcggaacctaagccacttgaaaaagatgctggggagaggaccattgcatggctggacaacattacgaactcaaatggttccttgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33207" stop="31095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32912" g_stop="32841" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="0.98"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="260" r_length="188" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="436" r_length="176" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31532" g_stop="31395" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="574" r_length="138" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E699914" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32912" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAA-CCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTG</genome_strand>
        <mrna_strand>CCCCCGTTCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATCGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGCGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCCAC.........................................................................GCGCGGAACCTAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGCTGGACAACATTACGAACTCAAATGGTTCCTTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E241684" ref_strand="+" ref_description="SGN-E241684 [cLED-36-O15]">
      <seq>tctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33177" stop="31096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32877" g_stop="32841" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="0.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="225" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="400" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31532" g_stop="31396" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="537" r_length="137" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E241684" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32877" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCT</genome_strand>
        <mrna_strand>TCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E261231" ref_strand="+" ref_description="SGN-E261231 [cLEG-65-D24]">
      <seq>caactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaataaggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctgggggagaggaccattgcatggttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33218" stop="31175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32918" g_stop="32841" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="266" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31780" g_stop="31606" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="441" r_length="175" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31532" g_stop="31475" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="500" r_length="59" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E261231" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32918" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31606"/>
          <exon e_start="31532" e_stop="31475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCT-GGGGAGAGGACCATTGCATGGTTGGA</genome_strand>
        <mrna_strand>CAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAAGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGGAGAGGACCATTGCATGGTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E574659" ref_strand="+" ref_description="SGN-E574659 [34162]">
      <seq>gcaacatctgctcatacttgcaccggagatggtaatgctattgttgcgcgcgctgggcttcctcttcagggatcttgagtttgtgcaatttcatccaactggtatatatggagctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcgtcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtgactaaggagccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaaaggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgtgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgtcgtttttgcgacggggcatgtgccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33715" stop="31332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33415" g_stop="33347" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="134" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32984" g_stop="32841" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="278" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="466" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31780" g_stop="31632" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="617" r_length="151" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E574659" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33415" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCA-GGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTG-GAC-GGGCATGTGCTAA</genome_strand>
        <mrna_strand>GCAACATCTGCTCATACTTGCACCGGAGATGGTAATGCTATTGTTGCGCGCGCTGGGCTTCCTCTTCAGG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGAGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCGTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTGACTAAGGAGCCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAAAGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGTGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTCGTTTTTGCGACGGGGCATGTGCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E709825" ref_strand="+" ref_description="SGN-E709825 [FA53BC07]">
      <seq>cccgcttcatctgctcatacttgcactggagatggtaatgctactcggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtacgacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccatatgctgtgatccctggactgatggctgctggtgaatcaccatgcgcatctgttcatggtgccaatcgtcttggtgcacattctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33717" stop="31367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33418" g_stop="33347" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="138" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32984" g_stop="32841" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="282" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="0.98"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="470" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31780" g_stop="31667" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="584" r_length="114" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E709825" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33418" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTA-T-GGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTT</genome_strand>
        <mrna_strand>CCCGCTTCATCTGCTCATACTTGCACTGGAGATGGTAATGCTACTCGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCATATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAATCACCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCACATTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E471190" ref_strand="+" ref_description="SGN-E471190 [cSTB-23-I9]">
      <seq>gtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcgtcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtgactaaggagccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaaaggggatgatccagatgctgtgatccctggactgatggctgctggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33275" stop="31419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32975" g_stop="32841" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31895" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="323" r_length="188" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31780" g_stop="31719" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="385" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E471190" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E471190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32975" e_stop="32841"/>
          <exon e_start="32082" e_stop="31895"/>
          <exon e_start="31780" e_stop="31719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGA</genome_strand>
        <mrna_strand>GTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCGTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTGACTAAGGAGCCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAAAGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E258482" ref_strand="+" ref_description="SGN-E258482 [cLEG-47-L10]">
      <seq>aactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="33217" stop="31681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32917" g_stop="32841" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32082" g_stop="31981" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="179" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E258482" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>179</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32917" e_stop="32841"/>
          <exon e_start="32082" e_stop="31981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTG</genome_strand>
        <mrna_strand>AACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E466150" ref_strand="+" ref_description="SGN-E466150 [cPRO-23-I4]">
      <seq>agcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttggaaaaggaggacaagcctatcgttgtgcatgtgctgcggatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggcaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcaccggagatggtaatgctatggttgcgcgcgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggagctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcgtcaagagatgttgtttccagatctatgactatggaaattcgagaanggcgtggtgtangacctttgaaggacatatctatcttcacctcaatcacttacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="34642" stop="31739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34342" g_stop="34239" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="245" r_length="141" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33614" g_stop="33529" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="331" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33439" g_stop="33347" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="424" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="488" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="32984" g_stop="32841" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="632" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758">
            <donor d_prob="0.943" d_score="0.96"/>
            <acceptor a_prob="0.895" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="32082" g_stop="32039" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="675" r_length="43" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E466150" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E466150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34342" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33529"/>
          <exon e_start="33439" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32841"/>
          <exon e_start="32082" e_stop="32039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCT</genome_strand>
        <mrna_strand>AGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGAAAAG............................................................................................................................................................................................GAGGACAAGCCTATCGTTGTGCATGTGCTGCGGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGCACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACCGGAGATGGTAATGCTATGGTTGCGCGCGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGAGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCGTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAANGGCGTGGTGTAN......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGA-CATATCTATCTTCACCTCAATCACTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E603635" ref_strand="+" ref_description="SGN-E603635 [56729]">
      <seq>caatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagcaccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttggaaaaggaggacaagcctatcgttgtgcatgcgctgcggatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcaccggagatggtaatgctatggttgcgcgcgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggagctggttggctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggttatgccccaattgccaaggatcttgcgtcaagaaatgttgtttccaggatctatgactatggaaaattcgaagaagggcgtggtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="35750" stop="32543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35450" g_stop="35368" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="171" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="318" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="459" r_length="141" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33614" g_stop="33529" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="545" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33439" g_stop="33347" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="638" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="702" r_length="64" r_score="0.969"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="32984" g_stop="32843" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="848" r_length="146" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E603635" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35450" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33529"/>
          <exon e_start="33439" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGG-TATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCA-GATCTATGACTATGG-AAATTCG-AGAAGGGCGTGGTGT</genome_strand>
        <mrna_strand>CAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCACCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGAAAAG............................................................................................................................................................................................GAGGACAAGCCTATCGTTGTGCATGCGCTGCGGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACCGGAGATGGTAATGCTATGGTTGCGCGCGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGAGCTGGTTGGCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTTATGCCCCAATTGCCAAGGATCTTGCGTCAAGAAATGTTGTTTCCAGGATCTATGACTATGGAAAATTCGAAGAAGGGCGTGGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E705698" ref_strand="+" ref_description="SGN-E705698 [FA27DE11]">
      <seq>tcggcacgagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagcatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="35753" stop="32665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35454" g_stop="35368" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="175" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="322" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="463" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33614" g_stop="33529" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="549" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33439" g_stop="33347" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="642" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33251" g_stop="33188" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="706" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="32984" g_stop="32967" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="724" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E705698" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35454" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33529"/>
          <exon e_start="33439" e_stop="33347"/>
          <exon e_start="33251" e_stop="33188"/>
          <exon e_start="32984" e_stop="32967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTG</genome_strand>
        <mrna_strand>TCGGCACGAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E583923" ref_strand="+" ref_description="SGN-E583923 [9744]">
      <seq>ggcacatgtatgatacagtcaaaggaacgtgattggttaggtgatcaggatagctatccaatacatgtgtagagaagcaccaaacagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagataggtaaaatatatcaacgtgcatttggtggtcaacagcctggactttggaaaagtgaggacaatgcctatcgttgtcgcatgcgctgcggatcgagactagtgcatgctctatatgcatactctttatggccaggccatgaagcataatacacagttttttcgtggaatatattacgctttggatttactaactgaacagtgatgggagctgccaaggtgtaatatcactaaatatggaggatggtaccttgcatcgattccgtgctgccaattactattttggccaccgggggttatggccgagcttacttctcgggaacatctgctcatacttgcaccggagatggtaatgctatggttgcgcgcgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccacgtggtatatatgggagcctggttgcctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="35080" stop="32896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34780" g_stop="34742" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="0.95"/>
            <acceptor a_prob="0.944" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="191" r_length="151" r_score="0.932"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="0.94"/>
            <acceptor a_prob="0.971" a_score="0.71"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="342" r_length="151" r_score="0.837"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="0.83"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33614" g_stop="33529" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="429" r_length="87" r_score="0.953"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89">
            <donor d_prob="0.944" d_score="0.94"/>
            <acceptor a_prob="0.943" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33439" g_stop="33347" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="522" r_length="93" r_score="0.968"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33251" g_stop="33196" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="580" r_length="58" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E583923" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34780" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33529"/>
          <exon e_start="33439" e_stop="33347"/>
          <exon e_start="33251" e_stop="33196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCACATGTATGATACAGTCAAAGGAA-GTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGAT-GCTATCCAATACATGTGTAGAGAAGCTCCAAA-AGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGAT-GGTAAAATATATCAACGTGCATTTGGTGGTCAA-AGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAG-GAGGACAA-GCATATCGTTGT-GCATGCGCTGCAGATCG-GACT-GGGCATGCTCTAT-TGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTT-GTGGAATAT-TT-CGCTTTGGATTTACTAA-TGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAA-TACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGG-G-CTGGTTGCCTCAT</genome_strand>
        <mrna_strand>GGCACATGTATGATACAGTCAAAGGAACGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATAGCTATCCAATACATGTGTAGAGAAGCACCAAACAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATAGGTAAAATATATCAACGTGCATTTGGTGGTCAACAGCCTGGACTTTGGAAAAG............................................................................................................................................................................................TGAGGACAATGCCTATCGTTGTCGCATGCGCTGCGGATCGAGACTAGTGCATGCTCTATATGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTCGTGGAATATATTACGCTTTGGATTTACTAACTGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATATCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATTACTATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGGAACATCTGCTCATACTTGCACCGGAGATGGTAATGCTATGGTTGCGCGCGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCACGTGGTATATATGGGAGCCTGGTTGCCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E408652" ref_strand="+" ref_description="SGN-E408652 [PPI-11-D14]">
      <seq>gattgctctacattgtattctgtacttcttcatctacaactccattcaatctccgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacgatagtggatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagcaccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttggaaaaggaggacaagcctatcgttgtgcatgtgctgcggatcggactgggcatgctctattgcatactctntatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36465" stop="33607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36165" g_stop="35975" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="0.87"/>
            <acceptor a_prob="0.977" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="362" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="450" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="597" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34050" g_stop="33910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="738" r_length="141" r_score="0.972"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33614" g_stop="33607" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="746" r_length="8" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E408652" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36165" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33910"/>
          <exon e_start="33614" e_stop="33607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCT-C--CGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGC</genome_strand>
        <mrna_strand>GATTGCTCTACATTGTATTCTGTACTTCTTCATCTACAACTCCATTCAATCTCCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGATAGTGGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCACCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGAAAAG............................................................................................................................................................................................GAGGACAAGCCTATCGTTGTGCATGTGCTGCGGATCGGACTGGGCATGCTCTATTGCATACTCTNTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E440768" ref_strand="+" ref_description="SGN-E440768 [cSTA-27-A9]">
      <seq>atttgattgctctacattgcattctgtacttcttcatctataactccattcaatctccgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgacgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacgatagtcgatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtcggagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcatatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagcaccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttggaaaaggaggacaagcctatcgttgtgcctgcgctgcggatcggactgggcatgctctattgcatactctntatggccaggccatgaagcataatacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36469" stop="33658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36169" g_stop="35975" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="363" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="451" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="0.98"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="598" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34050" g_stop="33958" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="691" r_length="93" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E440768" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440768" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36169" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACAC</genome_strand>
        <mrna_strand>ATTTGATTGCTCTACATTGCATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGACGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGATAGTCGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCGGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCATATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCACCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGAAAAG............................................................................................................................................................................................GAGGACAAGCCTATCGTTGTGCCTGCGCTGCGGATCGGACTGGGCATGCTCTATTGCATACTCTNTATGGCCAGGCCATGAAGCATAATACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E450488" ref_strand="+" ref_description="SGN-E450488 [cSTS-9-B15]">
      <seq>caccattcaatctccgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttccttcaacagatctatctccggcggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacgatagtggatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgccatccaatacatgtgtagagaagcaccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttggaaaaggaggacaggcctatcgttgtgcatgcgctgcggatcggactggtcatgctctattgcatactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36426" stop="33688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36126" g_stop="35975" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.921"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="0.87"/>
            <acceptor a_prob="0.977" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="323" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="411" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34239" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="558" r_length="147" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34050" g_stop="33988" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="621" r_length="63" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E450488" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36126" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34239"/>
          <exon e_start="34050" e_stop="33988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGG---CCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTC</genome_strand>
        <mrna_strand>CACCATTCAATCTCCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTTCAACAGATCTATCTCCGGCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGATAGTGGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCCATCCAATACATGTGTAGAGAAGCACCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGAAAAG............................................................................................................................................................................................GAGGACAGGCCTATCGTTGTGCATGCGCTGCGGATCGGACTGGTCATGCTCTATTGCATACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E740020" ref_strand="+" ref_description="SGN-E740020 [LC19DA07]">
      <seq>cccactttccatccatttgattgctctacattgtattctgtacttcttcatctataactccattcaatctccgaacagaatccgcaccggcatattggtttccgatacgtttcagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacggtagtcgatcacacatatgatgcggtggtggttggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36484" stop="33979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36184" g_stop="35975" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="377" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="465" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34279" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="572" r_length="107" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E740020" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36184" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATAT</genome_strand>
        <mrna_strand>CCCACTTTC-CATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E364897" ref_strand="+" ref_description="SGN-E364897 [cLPT-4-H10]">
      <seq>ccattttcacatccatttgattgctctacattgtattctgtacttcttcatctataactccattcaatctccgaacagaatccgcaccggcatattggtttccgatacgtttcaggatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacggtagtcgatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctcccaaagcagttatagagcttgagaattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36483" stop="34018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36183" g_stop="35975" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="377" r_length="168" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="465" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34318" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="533" r_length="68" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E364897" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36183" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTAT</genome_strand>
        <mrna_strand>CCATTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGGATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCCAAAGCAGTTATAGAGCTTGAGAATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E441664" ref_strand="+" ref_description="SGN-E441664 [cSTA-31-I15]">
      <seq>cccattttcacatccatttgattgctctacattgcattctgtacttcttcatctataactccattcaatctccgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgacgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacgatagtcgatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtcggagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcatatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagcaccaaaagcagttatagagcttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36484" stop="34024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36184" g_stop="35975" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="378" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="466" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="0.98"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34324" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="528" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E441664" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E441664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36184" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAG</genome_strand>
        <mrna_strand>CCCATTTTCACATCCATTTGATTGCTCTACATTGCATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGACGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGATAGTCGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCGGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCATATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCACCAAAAGCAGTTATAGAGCTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E480960" ref_strand="+" ref_description="SGN-E480960 [cSTD-16-A1]">
      <seq>gccgtttagtaatattggttaacattaggggtagttccagtaaagtgggaatataatcgtcagtcgccttatactttgtcccggtacccaaaaaagagcatcccattttcacatccatttgattgctctacattgtattctgtacttcttcatctacaactccattcaatctccgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacgatagtggatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagcaccaaaagcagttatagagcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36586" stop="34026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36286" g_stop="35975" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="0.87"/>
            <acceptor a_prob="0.977" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="482" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="570" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34326" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="630" r_length="60" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E480960" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E480960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36286" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCT-C--CGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTG</genome_strand>
        <mrna_strand>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAATATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCC-AAAAAAGAGCATCCCATTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTACAACTCCATTCAATCTCCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGATAGTGGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCACCAAAAGCAGTTATAGAGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E479136" ref_strand="+" ref_description="SGN-E479136 [cSTD-8-B22]">
      <seq>aaaagacatcccattttcacatccatttgattgctctacattgtattctgtacttcttcatctacaactccattcaatctccgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacgatagtggatcacacatacgatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttangtgatcaggatgctatccaatacatgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36494" stop="34057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36194" g_stop="35975" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="0.87"/>
            <acceptor a_prob="0.977" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="390" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34742" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="478" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356">
            <donor d_prob="0.886" d_score="0.98"/>
            <acceptor a_prob="0.944" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34385" g_stop="34357" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="507" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E479136" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36194" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34742"/>
          <exon e_start="34385" e_stop="34357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCT-C--CGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGT</genome_strand>
        <mrna_strand>AAAAGA-CATCCCATTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTACAACTCCATTCAATCTCCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGATAGTGGATCACACATACGATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAN....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E339547" ref_strand="+" ref_description="SGN-E339547 [cTOE-16-G8]">
      <seq>tttgattgctctacattgtattctgtacttcttcatctataactccattcaatctccgaacagaatccgcaccggcatattggtttccgatacgtttcagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacggtagtcgatcacacatatgatgcggtggtggttggtgcaagcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36468" stop="34449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36168" g_stop="35975" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="362" r_length="168" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34749" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="443" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E339547" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36168" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGAT</genome_strand>
        <mrna_strand>TTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAAGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E439134" ref_strand="+" ref_description="SGN-E439134 [cSTA-11-E17]">
      <seq>ctacattgttttcttttcttcttcatctataactccatgggatctgcgaacacaacccgcaccggcatattggtttccgatacctttgagaatgtggcgctgtgtgtcacgtggtcttcgcgcttcctccaacagatctatctccggcggcggcggcggccattttcgccgactcttcttctcacaaactaatgtgggaggctcgtcctacaccatagtggatcacacatactatgcggtggtggacggcgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacacagttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacacccaaaggaagtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36458" stop="34449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36158" g_stop="35975" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.864"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="0.70"/>
            <acceptor a_prob="0.977" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="358" r_length="168" r_score="0.946"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34749" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="439" r_length="81" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E439134" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36158" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCT-C--C-G-G-CGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGAT</genome_strand>
        <mrna_strand>CTACATTGTTTTCTTTTCTTCTTCATCTATAACTCCATGGGATCTGCGAACACAACCCGCACCGGCATATTGGTTTCCGATACCTTTGAGAATGTGGCGCTGTGTGTCACGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCGGCGGCCATTTTCGCCGACTCTTCTTCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACCATAGTGGATCACACATACTATGCGGTGGTGGACGGCGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACAGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACACCCAAAGGAAGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E567756" ref_strand="+" ref_description="SGN-E567756 [11931]">
      <seq>tctccggcggcggcggcggccattttcgccgactcttctcctcacaaactattgtgggaggctcgtactacaccatagtggatcacacatacatgcggtggtggtcggtgcaggcggtgctgggcttcgtgcaccactagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgtggcagctcaaggtggtataaatgctgcattaggcaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="36314" stop="34502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36024" g_stop="35975" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.860"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439">
            <donor d_prob="0.993" d_score="0.86"/>
            <acceptor a_prob="0.977" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35535" g_stop="35368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="217" r_length="167" r_score="0.929"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34829" g_stop="34802" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="245" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E567756" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>246</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36024" e_stop="35975"/>
          <exon e_start="35535" e_stop="35368"/>
          <exon e_start="34829" e_stop="34802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACA</genome_strand>
        <mrna_strand>TCTCCGGCGGCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGGAGGCTCGTACTACACCATAGTGGATCACACATA-CATGCGGTGGTGGTCGGTGCAGGCGGTGCTGGGCTTCGTGCACCACTAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTGGCAGCTCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272147" ref_strand="+" ref_description="SGN-E272147 [cLEN-4-E9]">
      <seq>atttctacagttaacattcaactttatggcagagcatatcatgagtctacaacctggaaatccagagacagagaagctgaaaaaagagtacatcacatttatgaaaggagtggtttctgctccattgaattttccaggaacagcttacagaaaggccttacagtctcgatcaacaattcttggatttattgagagaaaaatggaggagaggcttaaggaaatgaacagaaacgaaaacgaccttctaggttgggttctgaagaattcaaatctctcaaaagagcaaattcttgatttgctactgagtttgctctttgctggccatgaaacttcatcagtagcaatagctctgtctattttcttactcgaaagctgtcctgctgctgttcaacaattaacagaagagcacttggagatttcccgggcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="45967" stop="44746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45667" g_stop="45505" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45504" i_stop="45400" i_length="105">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45399" g_stop="45163" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="400" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45162" i_stop="45077" i_length="86">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45076" g_stop="45046" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="431" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E272147" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45667" e_stop="45505"/>
          <exon e_start="45399" e_stop="45163"/>
          <exon e_start="45076" e_stop="45046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAGGTACCATTATAAATCACTAGGACATGAACGTGCTTACCATCTGAACAACCCCTTTTACTTGTTCACTTATTTTCAAGTTACGAATTATTTTTCTCTTTTCAACAGTCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACAGTAAGTTCAAATAATCAAACACTTTTATAGAATTTTCTTCTAGTCCACTCTTTAATATTTTTTCAACTTGTTGGTAATAAATTTAGGAAGAGCACTTGGAGATTTCCCGGGCAAAAA</genome_strand>
        <mrna_strand>ATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG.........................................................................................................TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACA......................................................................................GAAGAGCACTTGGAGATTTCCCGGGCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E258650" ref_strand="+" ref_description="SGN-E258650 [cLEG-50-G6]">
      <seq>cattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttagttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctaggctaaggaatcaacttttaagtgaagttgaaaagcatactttgcttgttcttggctcttggaaacaggattctgttgtttgtgcacaagatgaagcaaagaagttaacattcaactttatggcagagcatatcatgagtctacaacctggaaatccagagacagagaagctgaaaaaagagtacatcacatttatgaaaggagtggtttctgctccattgaattttccaggaacagcttacagaaaggccttacagtctcgatcaacaattcttggatttattgagagaaaaatggaggagaggcttaaggaaatgaacagaaacgaaaacgaccttctaggttgggttctgaagaattcaaatctctcaaaagagcaaattcttgatttgctactgagtttgctctttgctggccatgaaacttcatcagtagcaatagctctgtctattttcttactcgaaagctgtcctgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46493" stop="44877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46193" g_stop="45944" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45943" i_stop="45658" i_length="286">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45657" g_stop="45505" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="403" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45504" i_stop="45400" i_length="105">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45399" g_stop="45177" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="626" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E258650" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46193" e_stop="45944"/>
          <exon e_start="45657" e_stop="45505"/>
          <exon e_start="45399" e_stop="45177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAGGTGAATAAGTGGCTTCGCACTATTTTGTTGTAGTTATTGATCGTATTTTTTCTTCTTTTTTCAATGTATTTTATCATGATTTTTGCACTTCCATAATTTCCTTAAGGTGAGTGTAAAACACTCTACCTTTCAAGGTAGGGTAAGGTTTACACGTTCAATGTACTCTTTCAGACCTCGTTCAATGTACTCTTTCAGACCTCATTTGTATGATTACACTGAGTATGTTATTATTGATGCTACTCTAACTTTGGAAATTGTTGTTGTTTTGTGTGTGAAATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAGGTACCATTATAAATCACTAGGACATGAACGTGCTTACCATCTGAACAACCCCTTTTACTTGTTCACTTATTTTCAAGTTACGAATTATTTTTCTCTTTTCAACAGTCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTG</genome_strand>
        <mrna_strand>CATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG..............................................................................................................................................................................................................................................................................................TTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG.........................................................................................................TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E409145" ref_strand="+" ref_description="SGN-E409145 [PPI-13-A20]">
      <seq>aaaaaacagagaagaagaaaaggaaaaacagtgaaatcatcaatgtctgacttagagttttttctttttcttgttcctccaatcttggcagtccttattattcttaatctattcaaaagaaaacacaaatttcaaaatcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttactcagttactactattggagatttcatgcaagatcatatctcaaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaattgtttcagcagatgcagggcttaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttggttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctagactcaggaatcaacttttaagtgaagttgaaaagcatactgtgcttgttcttggctcttggaaacaggattctgttgtttgtgcacaagatgaagcaaagaagtttacattcaactttatggcagagcatatcatgagtctacaacctggaaatccagagacagagaagctgaagaaagagtacatcacatttatgaaaaggagtggtttctgctccattgaattttccaggaacagcttacagaaaggccttacagtctcgatcaacattcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46878" stop="45079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46579" g_stop="46335" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46334" i_stop="46269" i_length="66">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46268" g_stop="45944" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="570" r_length="325" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45943" i_stop="45658" i_length="286">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45657" g_stop="45505" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="724" r_length="154" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45504" i_stop="45400" i_length="105">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45399" g_stop="45379" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="744" r_length="20" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E409145" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409145" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46579" e_stop="46335"/>
          <exon e_start="46268" e_stop="45944"/>
          <exon e_start="45657" e_stop="45505"/>
          <exon e_start="45399" e_stop="45379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGA-AGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAGGTGAATAAGTGGCTTCGCACTATTTTGTTGTAGTTATTGATCGTATTTTTTCTTCTTTTTTCAATGTATTTTATCATGATTTTTGCACTTCCATAATTTCCTTAAGGTGAGTGTAAAACACTCTACCTTTCAAGGTAGGGTAAGGTTTACACGTTCAATGTACTCTTTCAGACCTCGTTCAATGTACTCTTTCAGACCTCATTTGTATGATTACACTGAGTATGTTATTATTGATGCTACTCTAACTTTGGAAATTGTTGTTGTTTTGTGTGTGAAATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGA-AAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAGGTACCATTATAAATCACTAGGACATGAACGTGCTTACCATCTGAACAACCCCTTTTACTTGTTCACTTATTTTCAAGTTACGAATTATTTTTCTCTTTTCAACAGTCTCGATCAACAATTCTTGGA</genome_strand>
        <mrna_strand>AAAAAACAGAGAAG-AAGAAAAGGAAAAACAGTGAAATCATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTGTTCCTCCAATCTTGGCAGTCCTTATTATTCTTAATCTATTCAAAAGAAAACACAAATTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTACTCAGTTACTACTATTGGAGATTTCATGCAAGATCATATCTCAAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATTGTTTCAGCAGATGCAGGGCTTAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTGGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGACTCAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTGTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG..............................................................................................................................................................................................................................................................................................TTTACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAGAAAGAGTACATCACATTTATGAAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG.........................................................................................................TCTCGATCAAC-ATTCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E414045" ref_strand="+" ref_description="SGN-E414045 [STM-18-H20]">
      <seq>cgaggaagaaaaggaaaacagtgaaatcatcaatgtctgacttagagttttttctttttcttgttcctccaatcatggcagtccttattattcttaatctattcaaaagaaaacacaaatttcaaattcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttattcagctactactattggagatttcatgcaagatcatatcacaaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaatagtttcagcagatgcagggcttaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttggttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctagactcaggaatcaacttttaagtgaagttgaaaagcatactgtgcttgttcttggctcttggaaacaggattctgttgtttgtgcacaagatgaagcanagaagtttacattcaactttatggcagagcatatcatgagtctacaacctgnaaatccagagacagagaagctgaagaaagagtacatcacatttatgaaaggagtgggttctgctccattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46868" stop="45240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46570" g_stop="46335" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46334" i_stop="46269" i_length="66">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46268" g_stop="45944" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="560" r_length="325" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45943" i_stop="45658" i_length="286">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45657" g_stop="45540" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="678" r_length="118" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E414045" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E414045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46570" e_stop="46335"/>
          <exon e_start="46268" e_stop="45944"/>
          <exon e_start="45657" e_stop="45540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAGGTGAATAAGTGGCTTCGCACTATTTTGTTGTAGTTATTGATCGTATTTTTTCTTCTTTTTTCAATGTATTTTATCATGATTTTTGCACTTCCATAATTTCCTTAAGGTGAGTGTAAAACACTCTACCTTTCAAGGTAGGGTAAGGTTTACACGTTCAATGTACTCTTTCAGACCTCGTTCAATGTACTCTTTCAGACCTCATTTGTATGATTACACTGAGTATGTTATTATTGATGCTACTCTAACTTTGGAAATTGTTGTTGTTTTGTGTGTGAAATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGA</genome_strand>
        <mrna_strand>CGAGGAAGAAAAGGAAAACAGTGAA-ATCATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTGTTCCTCCAATCATGGCAGTCCTTATTATTCTTAATCTATTCAAAAGAAAACACAAATTTCAAATTCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATCACAAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTTAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTGGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGACTCAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTGTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCANAGAAG..............................................................................................................................................................................................................................................................................................TTTACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGNAAATCCAGAGACAGAGAAGCTGAAGAAAGAGTACATCACATTTATGAAAGGAGTGGGTTCTGCTCCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E401868" ref_strand="+" ref_description="SGN-E401868 [PPC-5-H21]">
      <seq>aaaaacagagaagaagaaaaggaaaaacagtgaaatcatcaatgtctgacttagagttttttctttttcttgttcctccaatcttggcagtccttattattcttaatctattcaaaagaaaacacaaatttcaaaatcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttactcagttactactattggagatttcatgcaagatcatatctcaaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaattgtttcagcagatgcagggcttaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttggttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctagactcaggaatcaacttttaagtgaagttgaaaagcatactgtgcttgttcttggctcttggaaacaggattctgttgtttgtgcacaagatgaagcaaagaagtttacattcaactttatggcagagcatattatgagtctacaacctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46878" stop="45311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46578" g_stop="46335" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.910"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46334" i_stop="46269" i_length="66">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46268" g_stop="45944" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="569" r_length="325" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45943" i_stop="45658" i_length="286">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45657" g_stop="45611" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="616" r_length="47" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E401868" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46578" e_stop="46335"/>
          <exon e_start="46268" e_stop="45944"/>
          <exon e_start="45657" e_stop="45611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGA-AGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAGGTGAATAAGTGGCTTCGCACTATTTTGTTGTAGTTATTGATCGTATTTTTTCTTCTTTTTTCAATGTATTTTATCATGATTTTTGCACTTCCATAATTTCCTTAAGGTGAGTGTAAAACACTCTACCTTTCAAGGTAGGGTAAGGTTTACACGTTCAATGTACTCTTTCAGACCTCGTTCAATGTACTCTTTCAGACCTCATTTGTATGATTACACTGAGTATGTTATTATTGATGCTACTCTAACTTTGGAAATTGTTGTTGTTTTGTGTGTGAAATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGG</genome_strand>
        <mrna_strand>AAAAACAGAGAAGAA-GAAAAGGAAAAACAGTGAAATCATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTGTTCCTCCAATCTTGGCAGTCCTTATTATTCTTAATCTATTCAAAAGAAAACACAAATTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTACTCAGTTACTACTATTGGAGATTTCATGCAAGATCATATCTCAAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATTGTTTCAGCAGATGCAGGGCTTAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTGGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGACTCAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTGTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG..............................................................................................................................................................................................................................................................................................TTTACATTCAACTTTATGGCAGAGCATATTATGAGTCTACAACCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E269271" ref_strand="+" ref_description="SGN-E269271 [cLEM-18-G22]">
      <seq>ttattgagtgttgaaactgaaaaagaagaagaaagaaatagagaagaaggaataacatcaatgtctgacttagagttttttctttttcttattcctccaatcttagcagtacttataattcttaatctattcaaaagaaaacacaactttcaaaatcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttattcagctactactattggagatttcatgcaagatcatatttctaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaatagtttcagcagatgcagggctaaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttagttcaagttggacaaatgcatagagatatgaggatgattcctctgaattttttgagcaatgctaggctaaggaatcaacttttaagtgaagttgaaaagcatactttgcttgttcttggctcttggaaacaggattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46897" stop="45675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46597" g_stop="46335" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46334" i_stop="46269" i_length="66">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46268" g_stop="45975" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="557" r_length="294" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E269271" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269271" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46597" e_stop="46335"/>
          <exon e_start="46268" e_stop="45975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTC</genome_strand>
        <mrna_strand>TTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTCCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272859" ref_strand="+" ref_description="SGN-E272859 [cLEM-25-M4]">
      <seq>aatttgtttggagagccaacaatagtttcagcagatgcagggctaaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttagttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctatgctaaggaatcaacttttaagtgaagttgaaaagcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46546" stop="45708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46246" g_stop="46008" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E272859" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>239</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272859" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46246" e_stop="46008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATAC</genome_strand>
        <mrna_strand>AATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTATGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E473116" ref_strand="+" ref_description="SGN-E473116 [cSTB-31-O1]">
      <seq>aagaaaaggaaaaacagtgaaatcatcaatgtctgacttagagttttttctttttcttgttcctccaatcatggcagtccttattattcttaatctattcaaaagaaaacacaaatttcaaattcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttattcagctactactattggagatttcatgcaagatcatatcacaaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaatagtttcagcagatgcagggcttaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttggttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctagactcangaatcaacttttaagtgaagttgaaaagcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="46865" stop="45709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46565" g_stop="46335" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46334" i_stop="46269" i_length="66">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46268" g_stop="46009" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="491" r_length="260" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E473116" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46565" e_stop="46335"/>
          <exon e_start="46268" e_stop="46009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATA</genome_strand>
        <mrna_strand>AAGAAAAGGAAAAACAGTGAAATCATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTGTTCCTCCAATCATGGCAGTCCTTATTATTCTTAATCTATTCAAAAGAAAACACAAATTTCAAATTCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATCACAAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTTAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTGGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGACTCANGAATCAACTTTTAAGTGAAGTTGAAAAGCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E720672" ref_strand="+" ref_description="SGN-E720672 [FC11CA03]">
      <seq>ttgtttctcttaataaaatagcatactgtattaacaaaatcttctatcttatttcgtctaactgtgtactggggtcatgcgaatccctctcagtttagcattttcttcttcgttttccttttgcgttggaccagtgtaacagcttattcggagggatcgtttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcaaagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgaaaagatggaaaacatgctcaactacacaacaattctgtcggttcgacggaaccaagtaatttgaagtcagtttctacgtacgatatacaaaaaaatgtgtataaataaaactgatatagttcaaattttggatcagtcatttcattgtttaaattattgcggttttgacttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="65465" stop="23694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65165" g_stop="64775" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="391" r_length="391" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64774" i_stop="58103" i_length="6672">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.300" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58102" g_stop="57923" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="571" r_length="180" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57922" i_stop="57684" i_length="239">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.657" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57683" g_stop="57660" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="595" r_length="24" r_score="0.542"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E720672" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E720672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65165" e_stop="64775"/>
          <exon e_start="58102" e_stop="57923"/>
          <exon e_start="57683" e_stop="57660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCTCTTAATAAAATAGCATACTGTATTAAAAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGTTACGTAGATACTCAACCAACTGCCATTCAACTTCAGACAAATTCCGATCTAAACACACAAACAAATGCAAATCAACAAAATCCAATCTATATATATACCCACGTACAAAAGGTAAACAAAACTTCATCTGGATATAATCTCTTCCCCAATAGACAACCCCCTGTTAGCTCCTTTCCTTTGTTACCTGACATTACATTCCATCTATCATAGATGATTTTTCTGTGTCATTCTCTCTTTATAGGTGATTTTCTTATACTTAGTTGCTATCTTTTTACTGGCCCTTCTCAAATTGCATCATTATTTGCTTAGTCTGACTCCCATAGGATGCCTGGAAATTCCTTGACTGATCCCCATGAAAGTGAAACACCTAAAAGTTCCCTAGATTCTTATTACTTTGACATTCTTATCTGAACCGTCCTGGTTCATCAACACTTTGATTTCATTTACTATTTTTACGCATAATCTCTGTTATAAAAGATTGACTCATTTGCCTTGTTGATCTTTGTTGGTTCTGTTTCAAGATATCACTTTTCTTCTTCATTGTTGGTCTCCTAGCATGAAAATTACTCTCCTCATCTCCTAGAATGTCCCTCTCCGAGATCATTTAGGTAGGTATCTGCTGCAATCTCGCATGTTGCGTTAATTCTCCAATATCAGATGTTTCCCCTGTCTGATTTACTTATTCTCTTTGTGCATCAAATACCATAATCCTCTTTCCCGAATGACAAGAATGGATATGTAGCATTAAAGGCTCATATCTAGCATATTAGAGCATAAGTATTGCATTTTGTAAGTTACTCTTATTCTCAGTTTGACTTGCTTTCATCTGCTCTCTCCATTTCAAATGTGGAGTACCGTTTGACTTGGTCGCTTATAAGAGAAAATACTAGATGCTTAATATCTGTCGAGGAAACATCTTGGACTGTGATATGATTAATGTATTTTTAAGGTGAAAATAGAAAAAGCAAACGTATTGAAAAGTGTTGAGTGGATCCACCAGAAACAAAGTTGTAGTATACATAATGAAAAAATTTAAAGAGAAATAGTTTGATAAATTACTATTTCAGATACAAAATTTTGCTGGAAGATTATGAGAGTATTGTATATTAATAGTGGTGGAACTTGTAAAAGGAACATTTAGTTGCTCCATCAATCACAATTTATATCGTATTTCATGTGTTCTCAAGGAGTAAGCTGTAAAAGGAGTAGATGTCCTGAATGATATTACAGGTTCATTCTGTAAAAATTAAATTTGGCGTTAGAATTGCAGAAAGTGAACACCATTGAAACGGCAATAAAAGTAGACTAATTATTTTTAGAATCACAATATCAGATGTTGATAAAATATTATAAACAACTTTTTGTTACTCCCTCCATATACTATATTACGTAGTAATGTTTGACTTGGTACAAAATTAAAATGTTTGTTTACAATTTGTGTTATATTAGATGTAGTGGAAGTAACTACTAAAAGAGTTTAAGAAGTTATTTTAGAGAGATAAAATTTAACTTGTTGAAAGTTGTATAGTATAATATTTTTAGTGTAATGGCTCAAACATTTTAGGACGTTGTGAAAGGGATGGTTGTCATAAAATTGGGACAAACTCCTTTGTTAATGGTATGTCAGGCAATTGCACTTGTAAATGGATGCAGTGCTAGTAGTAGTATATTAGCTCATCATCTGTTATGTGTAACTTGAAAATTTCTTTTCTCGTATATTTACGAGCTTGGATGCGCAAGATCTGAATCTACTCACACACTCAAACTAAATTACCCTCTGTTTTGCACCTTCAGTTATGCCTTGTCATTAGAATAATATTTACATGATGCAATCTTCATTCCACAAGTTTATAATCTAAACAGTTTTGGGAGACCTGTGCATTTGTTAATAGTGTTCCAAATTTGTAATTGTCTCAATTTTTATGTAGGGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGCTATTTTAATAATTCTTGCTTTGTTGTAAACTAAACCTGGTGGGTAAAAAGATGCTCAGTACTGGATAAATTCCAAGCATCTCTGATTGTAGTAAACTTTGAAGTGTATGTAGAGATTAACACGTAGTATCTGAATGATCAAAATCATCAGATAATAGTCTTTGAACACGGTTGAAATGACTTAGGTTCAGGAATATTATACTGAACCGTGTAGAAAAGTTGAGTCATGTAAGAGAATGACTTAAGAGTTGTACTATTGTTTTAATGAAAGCTAATTCTTAAATTTTAGAGCTGTTACTCCAGATGCATAATCAATTGAAGTGAATCACTGGTGTAATTAAATTAAGATAACATTGACATGTATGGAATACTTGACTCATGGAGTTGCCAATTTCTAATCTGCACATCCTCTAGTTTCTAGAGCCGCCTATTACGACTTGTCACACAATTCACAAAATTGACAGATCAGTTTTCCAATGTTACGTTGCCATTTGGATTTTGTAGGAATTTATTTCTTCTTGGTGTTTGGTCTAATTTTCTTGGGGCCAAAACACTGTCTTTCAAATATCAACTCAGTCTATCGAATTGTCAACCCAAGGCCTTTTCACTTGCTCATTCGACTGTTTTCAAAAAAAAGTAGTTGGGTTTCTTGTTTCTCCTTTTGTAGTTTTATGAAAATCTTCATCAACGTTATCGTTGTGGAAAACATTTCGAATATGTGCAATGCAACCTTTCACAGTTAACTTCATTTTGTTCATGAAAAAACACTTAAACTAATCACCCTTGACTCTACATTAACATTAAAAAATTATATTATGTATATAGAATTGAATATTATTTTTAGTATGTTTATCAAAAACTTCATCACTACCTGTCCCTAAAACTTTATTTAACTAGCTAGTTTTCTTGTAGTTGCATTGTAGCCCTTTAATTATATCTGAGCTAGATATGATTATTAATTAGTTGTTGATCACGGCGGCTTTGTCATTTTTTGTTATTAGAAAAGATGGAAAACATGCTCAACTACACAACAATTCTGTCGGTTCGACGGAACCAAGTAATTTGAAGTCAGTTTCTACGTACGATATACAAAAAAATGTGTATAAATAAAACTGATATAGTTCAAATTTTGGATCAGTCATTTCATTGTTTAAATTATTGCGGTTTTGACTTATCAAACTGTGTGAGTCAAGTGGTGATCCCGTGGTACTATTCAATATTATTACAAATTGGACTTATCAAATTACGTTTCAAATGGTATTCTATTGATTATTGTATGTCTTTTATTCTTTACAAAGATATGAGTAAAACTTGTAGTATTCATATTATAAATATATCACTTTATCTATTCAAGATTATTATATTTTGAACTTATTATATTTACCGTTGTTTACCTTTCATTTTTTTTTCTTCCTAATAGAGATATGAATAGATGAATTAAATA</genome_strand>
        <mrna_strand>TTGTTTCTCTTAATAAAATAGCATACTGTATTAACAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAAAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGATGGAAAACATGCTCAACTACACAACAATTCTGTCGGTTCGACGGAACCAAGTAATTTGAAGTCAGTTTCTACGTACGATATACAAAAAAATGTGTATAAATAAAACTGATATAGTTCAAATTTTGGATCAGTCATTTCATTGTTTAAATTATTGCGGTTTTGACTTAAAAAAAA...............................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E346226" ref_strand="+" ref_description="SGN-E346226 [cTOF-23-A12]">
      <seq>tgtgtactggggtcatgcgaatccctctcagtttagcattttcttcttcgttttccttttgcgttggaccagtgtaacagcttattcggagggatcgtttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgggctgatgttgcagttgctttattctgcgccttgttatttggtgtgcttatattatcatcatatgtggccctttatttacgacattactggagttcctttctcattataagccttgccattacccttccagtgcgtctgagaatgttacgacaggctcatgcaagaaagaaagtaagacagttacctttgtctatgtgaacttccttctacttctggaagcccaaacagtggtttaagtgaaaggaataccttttgcacaaaagtgctctccaattgtagtaatacagttctttgatcttcgtcacataggctgaccaatcttctgctgtgaaagatgggacacacccttcatattactcttgatgactcattcattaagaaacaggatttagacgatcaattagcttcctatgaaatgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="65403" stop="58824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65103" g_stop="64775" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64774" i_stop="59548" i_length="5227">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59547" g_stop="59124" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="752" r_length="423" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E346226" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65103" e_stop="64775"/>
          <exon e_start="59547" e_stop="59124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGTTACGTAGATACTCAACCAACTGCCATTCAACTTCAGACAAATTCCGATCTAAACACACAAACAAATGCAAATCAACAAAATCCAATCTATATATATACCCACGTACAAAAGGTAAACAAAACTTCATCTGGATATAATCTCTTCCCCAATAGACAACCCCCTGTTAGCTCCTTTCCTTTGTTACCTGACATTACATTCCATCTATCATAGATGATTTTTCTGTGTCATTCTCTCTTTATAGGTGATTTTCTTATACTTAGTTGCTATCTTTTTACTGGCCCTTCTCAAATTGCATCATTATTTGCTTAGTCTGACTCCCATAGGATGCCTGGAAATTCCTTGACTGATCCCCATGAAAGTGAAACACCTAAAAGTTCCCTAGATTCTTATTACTTTGACATTCTTATCTGAACCGTCCTGGTTCATCAACACTTTGATTTCATTTACTATTTTTACGCATAATCTCTGTTATAAAAGATTGACTCATTTGCCTTGTTGATCTTTGTTGGTTCTGTTTCAAGATATCACTTTTCTTCTTCATTGTTGGTCTCCTAGCATGAAAATTACTCTCCTCATCTCCTAGAATGTCCCTCTCCGAGATCATTTAGGTAGGTATCTGCTGCAATCTCGCATGTTGCGTTAATTCTCCAATATCAGATGTTTCCCCTGTCTGATTTACTTATTCTCTTTGTGCATCAAATACCATAATCCTCTTTCCCGAATGACAAGAATGGATATGTAGCATTAAAGGCTCATATCTAGCATATTAGAGCATAAGTATTGCATTTTGTAAGTTACTCTTATTCTCAGTTTGACTTGCTTTCATCTGCTCTCTCCATTTCAAATGTGGAGTACCGTTTGACTTGGTCGCTTATAAGAGAAAATACTAGATGCTTAATATCTGTCGAGGAAACATCTTGGACTGTGATATGATTAATGTATTTTTAAGGTGAAAATAGAAAAAGCAAACGTATTGAAAAGTGTTGAGTGGATCCACCAGAAACAAAGTTGTAGTATACATAATGAAAAAATTTAAAGAGAAATAGTTTGATAAATTACTATTTCAGATACAAAATTTTGCTGGAAGATTATGAGAGTATTGTATATTAATAGTGGTGGAACTTGTAAAAGGAACATTTAGTTGCTCCATCAATCACAATTTATATCGTATTTCATGTGTTCTCAAGGAGTAAGCTGTAAAAGGAGTAGATGTCCTGAATGATATTACAGGTTCATTCTGTAAAAATTAAATTTGGCGTTAGAATTGCAGAAAGTGAACACCATTGAAACGGCAATAAAAGTAGACTAATTATTTTTAGAATCACAATATCAGATGTTGATAAAATATTATAAACAACTTTTTGTTACTCCCTCCATATACTATATTACGTAGTAATGTTTGACTTGGTACAAAATTAAAATGTTTGTTTACAATTTGTGTTATATTAGATGTAGTGGAAGTAACTACTAAAAGAGTTTAAGAAGTTATTTTAGAGAGATAAAATTTAACTTGTTGAAAGTTGTATAGTATAATATTTTTAGTGTAATGGCTCAAACATTTTAGGACGTTGTGAAAGGGATGGTTGTCATAAAATTGGGACAAACTCCTTTGTTAATGGTATGTCAGGCAATTGCACTTGTAAATGGATGCAGTGCTAGTAGTAGTATATTAGCTCATCATCTGTTATGTGTAACTTGAAAATTTCTTTTCTCGTATATTTACGAGCTTGGATGCGCAAGATCTGAATCTACTCACACACTCAAACTAAATTACCCTCTGTTTTGCACCTTCAGTTATGCCTTGTCATTAGAATAATATTTACATGATGCAATCTTCATTCCACAAGTTTATAATCTAAACAGTTTTGGGAGACCTGTGCATTTGTTAATAGTGTTCCAAATTTGTAATTGTCTCAATTTTTATGTAGGGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACA</genome_strand>
        <mrna_strand>TGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGC-CCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTTCCTATGAAATGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245177" ref_strand="+" ref_description="SGN-E245177 [cLEF-13-M18]">
      <seq>ttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgggctgatgttgcagttgctttattctgcgccttgttatttggtgtgcttatattatcatcatatgtggccctttatttacgacattactggagttcctttctcattataagccttgccattacccttccagtgcgtctgagaatgttacgacaggctcatgcaagaaagaaagtaagacagttacctttgtctatgtgaacttccttctacttctggaagcaccaaacagtggtttaagtgaaaggaataccttttgcacaaaagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="65305" stop="58980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65005" g_stop="64775" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64774" i_stop="59548" i_length="5227">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59547" g_stop="59280" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="499" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E245177" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65005" e_stop="64775"/>
          <exon e_start="59547" e_stop="59280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGTTACGTAGATACTCAACCAACTGCCATTCAACTTCAGACAAATTCCGATCTAAACACACAAACAAATGCAAATCAACAAAATCCAATCTATATATATACCCACGTACAAAAGGTAAACAAAACTTCATCTGGATATAATCTCTTCCCCAATAGACAACCCCCTGTTAGCTCCTTTCCTTTGTTACCTGACATTACATTCCATCTATCATAGATGATTTTTCTGTGTCATTCTCTCTTTATAGGTGATTTTCTTATACTTAGTTGCTATCTTTTTACTGGCCCTTCTCAAATTGCATCATTATTTGCTTAGTCTGACTCCCATAGGATGCCTGGAAATTCCTTGACTGATCCCCATGAAAGTGAAACACCTAAAAGTTCCCTAGATTCTTATTACTTTGACATTCTTATCTGAACCGTCCTGGTTCATCAACACTTTGATTTCATTTACTATTTTTACGCATAATCTCTGTTATAAAAGATTGACTCATTTGCCTTGTTGATCTTTGTTGGTTCTGTTTCAAGATATCACTTTTCTTCTTCATTGTTGGTCTCCTAGCATGAAAATTACTCTCCTCATCTCCTAGAATGTCCCTCTCCGAGATCATTTAGGTAGGTATCTGCTGCAATCTCGCATGTTGCGTTAATTCTCCAATATCAGATGTTTCCCCTGTCTGATTTACTTATTCTCTTTGTGCATCAAATACCATAATCCTCTTTCCCGAATGACAAGAATGGATATGTAGCATTAAAGGCTCATATCTAGCATATTAGAGCATAAGTATTGCATTTTGTAAGTTACTCTTATTCTCAGTTTGACTTGCTTTCATCTGCTCTCTCCATTTCAAATGTGGAGTACCGTTTGACTTGGTCGCTTATAAGAGAAAATACTAGATGCTTAATATCTGTCGAGGAAACATCTTGGACTGTGATATGATTAATGTATTTTTAAGGTGAAAATAGAAAAAGCAAACGTATTGAAAAGTGTTGAGTGGATCCACCAGAAACAAAGTTGTAGTATACATAATGAAAAAATTTAAAGAGAAATAGTTTGATAAATTACTATTTCAGATACAAAATTTTGCTGGAAGATTATGAGAGTATTGTATATTAATAGTGGTGGAACTTGTAAAAGGAACATTTAGTTGCTCCATCAATCACAATTTATATCGTATTTCATGTGTTCTCAAGGAGTAAGCTGTAAAAGGAGTAGATGTCCTGAATGATATTACAGGTTCATTCTGTAAAAATTAAATTTGGCGTTAGAATTGCAGAAAGTGAACACCATTGAAACGGCAATAAAAGTAGACTAATTATTTTTAGAATCACAATATCAGATGTTGATAAAATATTATAAACAACTTTTTGTTACTCCCTCCATATACTATATTACGTAGTAATGTTTGACTTGGTACAAAATTAAAATGTTTGTTTACAATTTGTGTTATATTAGATGTAGTGGAAGTAACTACTAAAAGAGTTTAAGAAGTTATTTTAGAGAGATAAAATTTAACTTGTTGAAAGTTGTATAGTATAATATTTTTAGTGTAATGGCTCAAACATTTTAGGACGTTGTGAAAGGGATGGTTGTCATAAAATTGGGACAAACTCCTTTGTTAATGGTATGTCAGGCAATTGCACTTGTAAATGGATGCAGTGCTAGTAGTAGTATATTAGCTCATCATCTGTTATGTGTAACTTGAAAATTTCTTTTCTCGTATATTTACGAGCTTGGATGCGCAAGATCTGAATCTACTCACACACTCAAACTAAATTACCCTCTGTTTTGCACCTTCAGTTATGCCTTGTCATTAGAATAATATTTACATGATGCAATCTTCATTCCACAAGTTTATAATCTAAACAGTTTTGGGAGACCTGTGCATTTGTTAATAGTGTTCCAAATTTGTAATTGTCTCAATTTTTATGTAGGGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGC</genome_strand>
        <mrna_strand>TTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245614" ref_strand="+" ref_description="SGN-E245614 [cLEF-43-J21]">
      <seq>gaattcctctcagtttagcattttcttcttcgtttggcgttttgcgttggaccagtgtaacagcttattcggagggatcgtttcttcaattgctaatttaccaatatctcagtgtacttacctgattctgcatttggttttggtcttgttggcggaggtttattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgggctgatgttgcagttgctttattctgcgccttgttatttggtgtgcttatattatcatcatatgtggccctttatttacgacattactggagttcctttctcattataagccttgccattacccttccagtgcgtctgagaatgttacgacaggctcatgccaagaaagaaagtaagacagttacctttgtctatgtgaacttccttctacttttggaagcaccaaacagtgggtttaagtgaaaggaataccttttgcacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="65385" stop="58985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65085" g_stop="64775" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64774" i_stop="59548" i_length="5227">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59547" g_stop="59285" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="577" r_length="265" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E245614" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65085" e_stop="64775"/>
          <exon e_start="59547" e_stop="59285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTT-TCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGTTACGTAGATACTCAACCAACTGCCATTCAACTTCAGACAAATTCCGATCTAAACACACAAACAAATGCAAATCAACAAAATCCAATCTATATATATACCCACGTACAAAAGGTAAACAAAACTTCATCTGGATATAATCTCTTCCCCAATAGACAACCCCCTGTTAGCTCCTTTCCTTTGTTACCTGACATTACATTCCATCTATCATAGATGATTTTTCTGTGTCATTCTCTCTTTATAGGTGATTTTCTTATACTTAGTTGCTATCTTTTTACTGGCCCTTCTCAAATTGCATCATTATTTGCTTAGTCTGACTCCCATAGGATGCCTGGAAATTCCTTGACTGATCCCCATGAAAGTGAAACACCTAAAAGTTCCCTAGATTCTTATTACTTTGACATTCTTATCTGAACCGTCCTGGTTCATCAACACTTTGATTTCATTTACTATTTTTACGCATAATCTCTGTTATAAAAGATTGACTCATTTGCCTTGTTGATCTTTGTTGGTTCTGTTTCAAGATATCACTTTTCTTCTTCATTGTTGGTCTCCTAGCATGAAAATTACTCTCCTCATCTCCTAGAATGTCCCTCTCCGAGATCATTTAGGTAGGTATCTGCTGCAATCTCGCATGTTGCGTTAATTCTCCAATATCAGATGTTTCCCCTGTCTGATTTACTTATTCTCTTTGTGCATCAAATACCATAATCCTCTTTCCCGAATGACAAGAATGGATATGTAGCATTAAAGGCTCATATCTAGCATATTAGAGCATAAGTATTGCATTTTGTAAGTTACTCTTATTCTCAGTTTGACTTGCTTTCATCTGCTCTCTCCATTTCAAATGTGGAGTACCGTTTGACTTGGTCGCTTATAAGAGAAAATACTAGATGCTTAATATCTGTCGAGGAAACATCTTGGACTGTGATATGATTAATGTATTTTTAAGGTGAAAATAGAAAAAGCAAACGTATTGAAAAGTGTTGAGTGGATCCACCAGAAACAAAGTTGTAGTATACATAATGAAAAAATTTAAAGAGAAATAGTTTGATAAATTACTATTTCAGATACAAAATTTTGCTGGAAGATTATGAGAGTATTGTATATTAATAGTGGTGGAACTTGTAAAAGGAACATTTAGTTGCTCCATCAATCACAATTTATATCGTATTTCATGTGTTCTCAAGGAGTAAGCTGTAAAAGGAGTAGATGTCCTGAATGATATTACAGGTTCATTCTGTAAAAATTAAATTTGGCGTTAGAATTGCAGAAAGTGAACACCATTGAAACGGCAATAAAAGTAGACTAATTATTTTTAGAATCACAATATCAGATGTTGATAAAATATTATAAACAACTTTTTGTTACTCCCTCCATATACTATATTACGTAGTAATGTTTGACTTGGTACAAAATTAAAATGTTTGTTTACAATTTGTGTTATATTAGATGTAGTGGAAGTAACTACTAAAAGAGTTTAAGAAGTTATTTTAGAGAGATAAAATTTAACTTGTTGAAAGTTGTATAGTATAATATTTTTAGTGTAATGGCTCAAACATTTTAGGACGTTGTGAAAGGGATGGTTGTCATAAAATTGGGACAAACTCCTTTGTTAATGGTATGTCAGGCAATTGCACTTGTAAATGGATGCAGTGCTAGTAGTAGTATATTAGCTCATCATCTGTTATGTGTAACTTGAAAATTTCTTTTCTCGTATATTTACGAGCTTGGATGCGCAAGATCTGAATCTACTCACACACTCAAACTAAATTACCCTCTGTTTTGCACCTTCAGTTATGCCTTGTCATTAGAATAATATTTACATGATGCAATCTTCATTCCACAAGTTTATAATCTAAACAGTTTTGGGAGACCTGTGCATTTGTTAATAGTGTTCCAAATTTGTAATTGTCTCAATTTTTATGTAGGGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATG-CAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGT-GGTTTAAGTGAAAGGAATACCTTTTGCACAAA</genome_strand>
        <mrna_strand>GAATTCCTCTCAGTTTAGCATTTTCTTCTTCGTTTGGCGTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATTTACCAATATCTCAGTGTACTTACCTGATTCTGCATTTGGTTTTGGTCTTGTTGGCGGAGGTTTATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTTTGGAAGCACCAAACAGTGGGTTTAAGTGAAAGGAATACCTTTTGCACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E325277" ref_strand="+" ref_description="SGN-E325277 [cTOC-1-B21]">
      <seq>ttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgaaattgcacccaaggtgttgcctagtggtcaatgaagtgagaagagaaccatgaggtctcaagttcaaatcctagcggagataaaaagacttgggggtttcttcccatttgcctaagcctttgaggcaaaattatctggtacctatgctggtgggagataacaggtgcccaatggaataattaaggcacaagcaagcaggctcggacaccacgattattttaaaaagaagtatgctggaaattgctttttttgttttgcatgtgaataatttagagaacgccacagatgcaccaatatctccagtacacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="65305" stop="61176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65005" g_stop="64775" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64774" i_stop="61789" i_length="2986">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61788" g_stop="61476" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="544" r_length="313" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E325277" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65005" e_stop="64775"/>
          <exon e_start="61788" e_stop="61476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</genome_strand>
        <mrna_strand>TTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E607946" ref_strand="+" ref_description="SGN-E607946 [23923]">
      <seq>gaacagtgtagcagttaattcggaggatcgtctcttcaattacgaatccaccattaactaggtgtagttcgttgcttctgaatttgcaattggaattgaaggcaaaaattcgattgagatcggagaatcaggttttccgatcgtttggggaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttccccaaagcttcatctctccaactggtacgtcttcatatttctctctgtaaatgtatttatccctgcacatagtaatatcaagtttaacaaatttagcagaagtttctgtttagacttttatttttatttttttaattcaatttatttgtgtatacctgagctatttgtacaaaagaattgattttgtgatatactacttaattgttcgcattacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="65337" stop="64278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65037" g_stop="64597" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="429" r_length="429" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="452" polyA_stop="464"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E607946" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E607946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65037" e_stop="64597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATT-AATTGAGATCGGAGAATCAGGTTTT-CGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGAT</genome_strand>
        <mrna_strand>GAACAGTGTAGCAGTTAATTCGGA-GGATCGTCTCTTCAATTACGAATCCACCATTAACTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGAATTGAAGGCAAAAATTCGATTGAGATCGGAGAATCAGGTTTTCCGATCG-TTTGGGGAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCCCCAAAGCTTCATCTCTCCAACTGGTACGTCTTCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGC----AGAAGTTTCTGTTTAGACTTTTAT--TTTTATTTTTTTA---A-TTCAATTTATTTGTGTATACCTGAGCTATTTGTAC--AAAAGAATTGATTTTGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E226830" ref_strand="+" ref_description="SGN-E226830 [cLEL-26-H9](-)">
      <seq>aaatttgcagtaccacaagtttgattactcaaccatttaaacaagaaaccaaggaaaagatactgctcgacgagtaaactggacatacagacgtagaaatgagggttaataatgcatggatagaggctcttacaagaaaatatctccaatctttctcctcttatctttgtgattttttggtacatttatctgattttagtacaacaatattgaacaaccaagattttgtcaaatgagctcaagttagaaactgagctcaactcatacctatacagattggaacaaggaggctgcctctgatatattttttcccctctcttctcaacaacttgcatatatttctttttggatgagaacaagtacaatattatgttatagaggagcatgtaaataatctaagattggtatgggtcatttgtaagttcatgaaaccaaggaatttttccttgccagaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="68353" stop="171503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68653" g_stop="69109" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69110" i_stop="69368" i_length="259">
            <donor d_prob="0.118" d_score="0.94"/>
            <acceptor a_prob="0.765" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69369" g_stop="69383" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="472" r_length="15" r_score="0.467"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E226830" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68653" e_stop="69109"/>
          <exon e_start="69369" e_stop="69383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTGCAGTACCACAAGTTTGATTACTCAACCATTTAAACAAGAAACCAAGGAAAAGATACTGCTCGACGAGTAAACTGGACATACAGACGTAGAAATGAGGGTTAATAATGCATGGATAGAGGCTCTTACAAGAAAATATCTCCAATCTTTCTCCTCTTATCTTTGTGATTTTTTGGTACATTTATCTGATTTTAGTACAACAATATTGAACAAACAAGATTTTGTCAAATGAGCTCAAGTTAGAAACTGAGCTCAACTCATACCTATACAGATTGGAACAAGGAGGCTGCCTCTGATATATTTTTTCCCCTCTCTTCTCAACAACTTGCATATATTTCTTTTTGGATGAGAACAAGTACAATATTATGTTATAGAGGAGCATGTAAATAATCTAAGATTGGTATGGGTCATTTGTAAGTTCATGAAACCAAGGAATTTTTCCTTGCCAGATCTGTCAGGCCCATTGTCTTTTGTCTACTACATTCAGTTGTGTCATCTCTTCCCTGCTTCCTTTAAAAAAGCAAGTTTGAAGCATTTTAACTAGAACTAAGTTTTATGCAGGGAATAATATTCATACAATTAGATTAATTAAAAGGTAAATACATGTTTGATAACATACAATTATAAGTAATAAAAGGTTAAAGTACACTAAATGTGTAAAAATTCATTCAATTTCCATGTATGATTCTTTTTAAATTTATTTCAAATGAAGTACAACTTAAAATGC</genome_strand>
        <mrna_strand>AAATTTGCAGTACCACAAGTTTGATTACTCAACCATTTAAACAAGAAACCAAGGAAAAGATACTGCTCGACGAGTAAACTGGACATACAGACGTAGAAATGAGGGTTAATAATGCATGGATAGAGGCTCTTACAAGAAAATATCTCCAATCTTTCTCCTCTTATCTTTGTGATTTTTTGGTACATTTATCTGATTTTAGTACAACAATATTGAACAACCAAGATTTTGTCAAATGAGCTCAAGTTAGAAACTGAGCTCAACTCATACCTATACAGATTGGAACAAGGAGGCTGCCTCTGATATATTTTTTCCCCTCTCTTCTCAACAACTTGCATATATTTCTTTTTGGATGAGAACAAGTACAATATTATGTTATAGAGGAGCATGTAAATAATCTAAGATTGGTATGGGTCATTTGTAAGTTCATGAAACCAAGGAATTTTTCCTTGCCAGAAAA...................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E226703" ref_strand="+" ref_description="SGN-E226703 [cLEL-26-H9](-)">
      <seq>gaaaccaaggaaaagatactgctcgacgagtaaactggacatacagacgtagaaatgagggttaataatgcatggatagaggctcttacaagaaaatatctccaatctttctcctcttatctttgtgattttttggtacatttatctgattttagtacaacaatattgaacaaacaagattttgtcaaatgagctcaagttagaaactgagctcaactcatacctatacagattggaacaaggaggctgcctctgatatattttttcccctctcttctcaacaacttgcatatatttctttttggatgagaacaagtacaatattatgttatagaggagcatgtaaataatctaagattggtatgggtcatttgtaagttcatgaaaccaaggaatttttccttgccagaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="68397" stop="171503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68697" g_stop="69109" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69110" i_stop="69368" i_length="259">
            <donor d_prob="0.118" d_score="0.94"/>
            <acceptor a_prob="0.765" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69369" g_stop="69383" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="428" r_length="15" r_score="0.467"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E226703" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68697" e_stop="69109"/>
          <exon e_start="69369" e_stop="69383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACCAAGGAAAAGATACTGCTCGACGAGTAAACTGGACATACAGACGTAGAAATGAGGGTTAATAATGCATGGATAGAGGCTCTTACAAGAAAATATCTCCAATCTTTCTCCTCTTATCTTTGTGATTTTTTGGTACATTTATCTGATTTTAGTACAACAATATTGAACAAACAAGATTTTGTCAAATGAGCTCAAGTTAGAAACTGAGCTCAACTCATACCTATACAGATTGGAACAAGGAGGCTGCCTCTGATATATTTTTTCCCCTCTCTTCTCAACAACTTGCATATATTTCTTTTTGGATGAGAACAAGTACAATATTATGTTATAGAGGAGCATGTAAATAATCTAAGATTGGTATGGGTCATTTGTAAGTTCATGAAACCAAGGAATTTTTCCTTGCCAGATCTGTCAGGCCCATTGTCTTTTGTCTACTACATTCAGTTGTGTCATCTCTTCCCTGCTTCCTTTAAAAAAGCAAGTTTGAAGCATTTTAACTAGAACTAAGTTTTATGCAGGGAATAATATTCATACAATTAGATTAATTAAAAGGTAAATACATGTTTGATAACATACAATTATAAGTAATAAAAGGTTAAAGTACACTAAATGTGTAAAAATTCATTCAATTTCCATGTATGATTCTTTTTAAATTTATTTCAAATGAAGTACAACTTAAAATGC</genome_strand>
        <mrna_strand>GAAACCAAGGAAAAGATACTGCTCGACGAGTAAACTGGACATACAGACGTAGAAATGAGGGTTAATAATGCATGGATAGAGGCTCTTACAAGAAAATATCTCCAATCTTTCTCCTCTTATCTTTGTGATTTTTTGGTACATTTATCTGATTTTAGTACAACAATATTGAACAAACAAGATTTTGTCAAATGAGCTCAAGTTAGAAACTGAGCTCAACTCATACCTATACAGATTGGAACAAGGAGGCTGCCTCTGATATATTTTTTCCCCTCTCTTCTCAACAACTTGCATATATTTCTTTTTGGATGAGAACAAGTACAATATTATGTTATAGAGGAGCATGTAAATAATCTAAGATTGGTATGGGTCATTTGTAAGTTCATGAAACCAAGGAATTTTTCCTTGCCAGAAAA...................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E420266" ref_strand="-" ref_description="SGN-E420266 [STM-30-P18]">
      <seq>ggtagcaagtgcaacatcaaccttttcaatgacattttcatcctctatgtcagttgtgcaatattacctattgaagcgtttccctgtcccatacgcaacaattgctgcagtagttggtcaacacgtcataagaagagtaattgctctgcttggaagagcctctattatcatattcatactggccatgacaatatttaccagtgcaatcagcttaggtggtgtggggatagcaaatatgattgagaagctggagaaccaagattatatgggatttgataacctttgttaccattcctagatatgtaatttggctttaaaacaaaggctagttgtggaaggatatgactacttaattccacattgtaataagtcacattttcaatttatattgcgtctatttgttttcaagaagaaaacaaaattataactggatccaaaaaaaagatgaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="79851" stop="78610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79551" g_stop="79457" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79456" i_stop="79337" i_length="120">
            <donor d_prob="0.843" d_score="1.00"/>
            <acceptor a_prob="0.430" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79336" g_stop="79217" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="215" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79216" i_stop="79135" i_length="82">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79134" g_stop="78911" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="435" r_length="220" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E420266" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420266" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="79551" e_stop="79457"/>
          <exon e_start="79336" e_stop="79217"/>
          <exon e_start="79134" e_stop="78911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACGGTACGCAACATAGACAAAAAAAAATTATGAAGAAATTATCTTCACTATAACTACCTTACGAAGAAATTTAATCTTGACAGTTTATATTTCAAAATGCAGCTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAAGAAGAGTAATTGCACTGCTTGGAAGAGCCTCTATAATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAGGTATAAATCATCTTTCATCCTGTCAATTGCTTCTTTCTGTTTTCTGAGCCTTAAAAATAACCTTATGTTGGATAACTGGCAGGTGGTGTGGGGATAGCAAATATGATAGAGAAGCTGAAGAACAATGACTATATGGGATTTGACAATCTATGTTACCATTCCTAGATATGTAATTTGGATTCAATACAAAGGCTACTTGTGGAAGGATATGAATACTTAATTCCACATTGTAATAAGTAGTTACATTTTCAATTTGTATTGTGTCTATTTGTTTTCAAGAAGAAAACAAAATGATAACTTGGATCC</genome_strand>
        <mrna_strand>GGTAGCAAGTGCAACATCAACCTTTTCAATGACATTTTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACG........................................................................................................................CAACAATTGCTGCAGTAGTTGGTCAACACGTCATAAGAAGAGTAATTGCTCTGCTTGGAAGAGCCTCTATTATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAG..................................................................................GTGGTGTGGGGATAGCAAATATGATTGAGAAGCTGGAGAACCAAGATTATATGGGATTTGATAACCTTTGTTACCATTCCTAGATATGTAATTTGGCTTTAAAACAAAGGCTAGTTGTGGAAGGATATGACTACTTAATTCCACATTGTAAT-A--AGTCACATTTTCAATTTATATTGCGTCTATTTGTTTTCAAGAAGAAAACAAAATTATAAC-TGGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E417291" ref_strand="-" ref_description="SGN-E417291 [STM-25-K23]">
      <seq>atgagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaaaggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgacgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcgacgcatcggcccatgttttgaattttgtatctgcttttggaattgtttggtaaattacttgctgagttcttatgtgaacttgttaaatgtgaatttattcgggatttgtgtgcgcttttgtgtttgttatgagtacttgtagatgaacagactattcgctcaaaaaaaaagaaaaaaaaactcgaggggggcccgtacccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="86981" stop="51099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86681" g_stop="86466" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86113" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="470" r_length="254" r_score="0.890"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86112" i_stop="84917" i_length="1196">
            <donor d_prob="0.000" d_score="0.78"/>
            <acceptor a_prob="0.997" a_score="0.47"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84916" g_stop="84872" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="515" r_length="45" r_score="0.467"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E417291" ref_strand="-">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417291" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="86681" e_stop="86466"/>
          <exon e_start="86367" e_stop="86113"/>
          <exon e_start="84916" e_stop="84872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTATGTTATGGTATTGTGGCACTTTATTATGGATCTGTTTTTGGGTATTATATCCGATGATCAAAATAGTCTTGATATTTCTTCGAGGGGGCTGGAATCCTGTAGAATAATAATAAATTAATTAAATTGTCCAGCGTCTAAATTATTTAGAAAATTGTAGGGATATCTTTATCATGTCTTTCAGGCTTCAAAGTAGTTATAAATGTGTGAAATGGATTTCGTTCTTATCCTTTAACCACAGGTCTTTGAGTTTTGAGTGAGATGTCTCTACCTTGCTGGGTCGTATGCTCTGTATATTTATGGATGGTCAGAGTTTTGATAGCCAAGAAGTATAGTTCGTTTACATAAAATGTTGAATAGAAAATGCTTGGAGTTCAGTAGTTACCAATAAGTACGCCTTACTGACTTTGTTCAAAGGCATGCTTTGTTTTGTACGAGTAAAAAGAGTTTCATATAAATGACATTTATATCAACACGATTTACATGTCTGTGTGGCCCTTTAATCTATTTCCCTTACATAATTAAAATGGGACAGTTGTGTAGAATGATGAACTAACAACGTAAAATAAATAAAGTAGTTACTGTTTGATTTATTTGTGTTCCATAGCAGACTGTTTGTCAGTCGTCTCTCTCCCTCATATTCTCACTCGCTATTCTCCCTCTCTCGCTCCTCGTCGTTCGCCTCTCTCGCCTTATACAATAGAAATGCATAAATTGTGTTTCTGTTTTTATTAAGCTAGAGAAAATTGTAATACAAATATCTTAATCCTATATACTTATAATCATACAATACAAATATTTTTCTGTCCAAGCCTCTTTTGCCTTTCTCTCTCTTGTTTTATACAAATACAATTTGTATATAATTTCTCTCTTTCTCGTTTATAGAATTTGATTCAATCATACACTTCCTACCCAAAGTCTATTTTGTCTTTCTCTCTTTCTCGTTTTATACAAATTCAAATTGTATATAATCGTCCTATATACTTATAATTATACAATACAAATATTTTTCTGCCCAAATCTCTTTTGTCTTTCTCTCTTTCTCGTTTTATACAATTCAAATAGTATATAATTTTTATTTCTCGTTTTATACAATTCCATTCAATTTTATATTCACTGTCCAATCGTAAAACGAAATCGGCATAACTTTCATTTATATACATATAACAAATTATACATATATATGTTTGCTAGGGGTGTACAAAATCGAATCGAAAATCGAATCAAACCGCAAACCGA</genome_strand>
        <mrna_strand>ATGAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAAGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGACGCATCGGCCCATGTTTTGAATTTTGTATCTGCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTTATGTGAACTTGTTAAATGTGAATTTATTCGGGATTTGTGTGCGCTTTTGTGTTTGTTATGAGTACTTGTA-GATGAACAGACTATTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAAAAAAAAGAAAAAAAAACTCGAGGGGGGCCCGTACCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E453635" ref_strand="+" ref_description="SGN-E453635 [cSTS-20-L13]">
      <seq>agagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaagggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgacgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcgacgcatcggcccatgttttaaattttgtatctgcttttggaattgtttggtaaattacttgcggagttcttatgtgaacttgttaaatgtgaatttattcgggatttgtgtgcgcttttgtgtttgttacgagtacttgtatgttgaacagactattcgctcatgttatggtattttggttctttattagcatatttgtttttggaaaanaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="86979" stop="85764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86680" g_stop="86466" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86083" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="500" r_length="285" r_score="0.884"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="518" polyA_stop="536"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E453635" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86680" e_stop="86466"/>
          <exon e_start="86367" e_stop="86083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTATGTTATGGTATTGTGGCACTTTATT</genome_strand>
        <mrna_strand>AGAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAGGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGACGCATCGGCCCATGTTTTAAATTTTGTATCTGCTTTTGGAATTGTTTGGTAAATTACTTGCGGAGTTCTTATGTGAACTTGTTAAATGTGAATTTATTCGGGATTTGTGTGCGCTTTTGTGTTTGTTACGAGTACTTGTATGTTGAACAGACTATTCGCTCATGTTATGGTATTTTGGTTCTTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E587182" ref_strand="-" ref_description="SGN-E587182 [78296]">
      <seq>gagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaaaggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgacgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcgacgcatcggcccatgttttgaattttgtatctgcttttggaattgtttggtaaattacttgctgagttcttatgtgaacttgttaaatgtgaatttattcgggatttgtgtgcgcttttgtgtttgttatgagtacttgtatgttgaacagactattcgctcatgttatggtattttggttcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="86979" stop="85786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86679" g_stop="86466" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86086" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="496" r_length="282" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E587182" ref_strand="-">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E587182" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="86679" e_stop="86466"/>
          <exon e_start="86367" e_stop="86086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTATGTTATGGTATTGTGGCACTTT</genome_strand>
        <mrna_strand>GAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAAGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGACGCATCGGCCCATGTTTTGAATTTTGTATCTGCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTTATGTGAACTTGTTAAATGTGAATTTATTCGGGATTTGTGTGCGCTTTTGTGTTTGTTATGAGTACTTGTATGTTGAACAGACTATTCGCTCATGTTATGGTATTTTGGTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E425151" ref_strand="-" ref_description="SGN-E425151 [STM-44-L5]">
      <seq>tcccgaccctgaagatgatcatggccattatgactattatgatcaccaccaaggtcgaggagactatgagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaagggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgacgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcgacgcatcggcccatgttttaaattttgtatctgcttttggaattgtttggtaaattacttgcggagttcttatgtgaacttgttaaatgtgaatttattcgggatttgtgtgcaattttgtgtttgttacgagtacttgtatgttgaacagactattcgctcatggtggagtattttggttctttatccaattatagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="87046" stop="85804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86746" g_stop="86466" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86107" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="542" r_length="261" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E425151" ref_strand="-">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425151" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="86746" e_stop="86466"/>
          <exon e_start="86367" e_stop="86107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTAT</genome_strand>
        <mrna_strand>TCCCGACCCTGAAGATGATCATGGCCATTATGACTATTATGATCACCACCAAGGTCGAGGAGACTATGAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAGGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGACGCATCGGCCCATGTTTTAAATTTTGTATCTGCTTTTGGAATTGTTTGGTAAATTACTTGCGGAGTTCTTATGTGAACTTGTTAAATGTGAATTTATTCGGGATTTGTGTGCAATTTTGTGTTTGTTACGAGTACTTGTATGTTGAACAGACTATTCGCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E573556" ref_strand="+" ref_description="SGN-E573556 [32884]">
      <seq>aggtcacatcaaggtcgaggagactatgagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaagggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgatgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcggcgcatcggcccatgttttgaattttgtatctgcttttggaattgtttggtaaattacttgctgagttcttatgtgaacttgttaaatgtgaatttattcgggatttgtgtgcgcttttgtgtttgttacgagtacttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="87006" stop="85830"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86707" g_stop="86466" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86130" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="479" r_length="238" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E573556" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86707" e_stop="86466"/>
          <exon e_start="86367" e_stop="86130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTA</genome_strand>
        <mrna_strand>AGGTCA-CATCAAGGTCGAGGAGACTATGAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAGGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGATGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGGCGCATCGGCCCATGTTTTGAATTTTGTATCTGCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTTATGTGAACTTGTTAAATGTGAATTTATTCGGGATTTGTGTGCGCTTTTGTGTTTGTTACGAGTACTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E592460" ref_strand="+" ref_description="SGN-E592460 [46194]">
      <seq>aaagatcgcggtcgtgaccgtgatcgagaccgcgaacgtgataggacacgtgaccgtgagcgaggcaaagacaaagaccgggatggtcaccgtgagcgagatcgccaccgcgagaaggacagggaaaaaggtaaggatgaaggagaggttgaccagggtcgtgggcgttctcgtgatagagaatatgattatgagcatgttgaatcaaaacacgagcggggacgacacggtgacaaagaaaggaattatgatcctgccgaacctgaagatgatcatggacattatgactattatgatcaccatcaaggtcgaggagactatgagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaagggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgatgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcggcgcatcggcccaatgttttgaaattgtgtatctgcttttggaattgtttggtaaattacttgctgagttcttatgtgaacttgttacaatgtgaatttattcgggatttgtgtgcgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="87300" stop="85855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87000" g_stop="86466" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86153" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="753" r_length="218" r_score="0.874"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E592460" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87000" e_stop="86466"/>
          <exon e_start="86367" e_stop="86153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCC-ATGTTTTG-AATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTA-AATGCGAATTTATTGGGGATGTGTGCGCGGTAA</genome_strand>
        <mrna_strand>AAAGATCGCGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAAAGACCGGGATGGTCACCGTGAGCGAGATCGCCACCGCGAGAAGGACAGGGAAAAAGGTAAGGATGAAGGAGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGAATCAAAACACGAGCGGGGACGACACGGTGACAAAGAAAGGAATTATGATCCTGCCGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCATCAAGGTCGAGGAGACTATGAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAGGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGATGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGGCGCATCGGCCCAATGTTTTGAAATTGTGTATCTGCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTTATGTGAACTTGTTACAATGTGAATTTATTCGGGATTTGTGTGCGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E428204" ref_strand="-" ref_description="SGN-E428204 [STM-49-N2]">
      <seq>tgattatgagcatgttgaatcaaaacacgagcggggacgacacggtgacaaagaaaggaattatgatcctgcggaacctgaagatgatcatggacattatgactattatgatcacccccaaggtcgaggagactatgagaatccagatgcacaaggtggtgatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcctatgaccacggggcatctgaggcaaaagaaaaggaccaggattacaagcgttcagataggtcacattctcgtgaatatgactactgacgatgaagagtatgcttcagcttgtgttgctgtggaagacatggcctactgatacctcaatgaaaatgcaactatctgttggaatacctgcttgactagtgcgggaatggaaacactaagatgatggtgcgacgcatcggcccatgttttgaattttgtatctgcttatggaattgtttggtaaattacttgctgagttcttatgtgaacttgttaaatggaattatattcgggattnaaccctatatatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="87115" stop="85866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86815" g_stop="86466" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="350" r_length="350" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.911" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86367" g_stop="86166" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="552" r_length="202" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E428204" ref_strand="-">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E428204" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="86815" e_stop="86466"/>
          <exon e_start="86367" e_stop="86166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTGGTAAGGTTGCAATAAAATCCACATGCTATGTAGGTACTTTTTAATTTGTCAGTCAATAATATTGCTGCATTAGACTTGTCTGAATTTTTGACTCACAGGAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTG-ACTTGTTAAATGCGAATTTATTGGGGAT</genome_strand>
        <mrna_strand>TGATTATGAGCATGTTGAATCAAAACACGAGCGGGGACGACACGGTGACAAAGAAAGGAATTATGATCCTGCGGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCCCCAAGGTCGAGGAGACTATGAGAATCCAGATGCACAAGGTGGTGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCCTATGACCACGGGGCATCTGAGGCAAAAGAAAAGGACCAGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCTTGTGTTGCTGTG..................................................................................................GAAGACATGGCCTACTGATACCTCAATGAAAATGCAACTATCTGTTGGAATACCTGCTTGACTAGTGCGGGAATGGAAACACT-AAGATGATGGTGCGACGCATCGGCCCATGTTTTGAATTTTGTATCTGCTTATGGAATTGTTTGGTAAATTACTTGCTGAGTTCTTATGTGAACTTGTTAAATGGAATTATATTCGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E307361" ref_strand="+" ref_description="SGN-E307361 [cLEY-12-A9]">
      <seq>caacaagagttggaaatgaagatgctactagagaggtggttcagcctggaagggcagcatctcgctctgaggagccaagagcacgagatgacagggatagggatcgggagaagtcccgtgaaagggtgcgagataaggacagagagaaatctcgtgagcgttctcatgacaggccaagggaacgtgaaagagatgacaaacatcatagggaacgcgagagaaccagagaaagagaaaaagatcgtggtcgtgaccgtgatcgagaccgcgaacgtgatagagaatatgattatgagcatgttgattcaaaacacgagcgagaccgacacggtgacaaagagaggaattatgatcctgcagaacctgaagatgatcatggacattatgactattatgatcaccaccaaggtcgaggagattatgagaatccagatgcacaaggtggggatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcttatgaccacggggcatctgagacaaaagaaagggatcgggattacaagcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="88164" stop="86236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87864" g_stop="87834" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87833" i_stop="87390" i_length="444">
            <donor d_prob="0.937" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87389" g_stop="87321" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="100" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87136" g_stop="86964" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="273" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86963" i_stop="86829" i_length="135">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86828" g_stop="86536" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="566" r_length="293" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E307361" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87864" e_stop="87834"/>
          <exon e_start="87389" e_stop="87321"/>
          <exon e_start="87136" e_stop="86964"/>
          <exon e_start="86828" e_stop="86536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAAGAGTTGGAAATGAAGATGCTACTAGGTATTGCATGAACTTGTCATATGTGCATTGCATAGTGCTATAACGGACATTGATCTCAGCTCTTCTTTAGTGCAATAATGGTTCCTGTAGTGTCTATGGAGTAAGAACGCTATTTTGATAGATACAGCAAGACATGTTTGCTTGTAGTTGACATGAACTGCTTTTTTGAATTTCAACTCATCTTTTGGGTTATATGGATGCTTCAGTTTGTGTTTTTTTCCCTATAAAGGACTTGCTGCTCTGAGCATTTATGTATGACGTCTTGCTTAGAAGTTGAATTTATTATTGTTTGGCATTCAGTTTGATAATTACTCGTAAAATGTTCTTAAAAGTAGTTTTTTTTTTGTGTAGTTGCCCTCTTGGTATGATTGTAAAAGTGAAAAGCTTAAATTCTTGGATGGAATTTTAATTATTGAAGACTCTAATACTCCTTTTATTTTTCAGAGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAGGTAACAACCTAGGCATTTATAGCTTATGCTTGCTTTGAGTTTCTTTCTCCCAATTTGACTCCCAGACAAATTTCTACTTCTCCAAGGATGAGTTGTCTGATTTACTACTCTGTTTAGTTTAAATGTGAGTTAATACTATAATGTGTTTCACGTCTAATACAATTATGAATTCCCATATTAGCAGGGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</genome_strand>
        <mrna_strand>CAACAAGAGTTGGAAATGAAGATGCTACTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG........................................................................................................................................................................................GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAAC.......................................................................................................................................GTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E449343" ref_strand="+" ref_description="SGN-E449343 [cSTS-6-M13]">
      <seq>attagtttcaagtgctattcattctgatattccattagtttctagaaccacaaaggtaaagatgttcgactcctaggtattttcctggtaagggtaaaacttaattttctggtagcttttgtttttttgagttgccaaacatgaccattcaatttccaagtccgagctacattacatgaaacaaagctgaggagccaagagcacgagatgacagggacagggatcgggagaagtcccgtgaaagggtgcgagataaggacagagagaaatctcgtgagcgttctcatgacagaccaagggaacgtgaaagagatgacaaacatcatagggaacgcgaaagaaccagagaaagagaaaaagatcgcggtcgtgaccgtgatcgcgaacgtgataggacacgtgaccgtgagcgaggcaaagacaaagaccgggatggtcaccgtgagcgagatcgccaccgcgagaaggacagggaaaaaggtaaggatgaaggtgaggttgaccagggtcgtgagcgttctcgtgatagagaatatgattatgagcatgttgaatcaaaacacgagcggggacgacacggtgacaaagaaaggaattatgatcctgccgaacctgaagatgatcatggacattatgactattatgatcaccacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="89157" stop="86397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88857" g_stop="88671" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88670" i_stop="87355" i_length="1316">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87354" g_stop="87321" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="220" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87136" g_stop="86697" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="654" r_length="434" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E449343" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88857" e_stop="88671"/>
          <exon e_start="87354" e_stop="87321"/>
          <exon e_start="87136" e_stop="86697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAGAAGATTGATAATAGAAGAGTGCTGGTTGATGTAGAACGTGGTAGAACAGTCCCCAATTGGCGTCCCCGCAGACTTGGTGGTGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAGGTATTGCATGAACTTGTCATATGTGCATTGCATAGTGCTATAACGGACATTGATCTCAGCTCTTCTTTAGTGCAATAATGGTTCCTGTAGTGTCTATGGAGTAAGAACGCTATTTTGATAGATACAGCAAGACATGTTTGCTTGTAGTTGACATGAACTGCTTTTTTGAATTTCAACTCATCTTTTGGGTTATATGGATGCTTCAGTTTGTGTTTTTTTCCCTATAAAGGACTTGCTGCTCTGAGCATTTATGTATGACGTCTTGCTTAGAAGTTGAATTTATTATTGTTTGGCATTCAGTTTGATAATTACTCGTAAAATGTTCTTAAAAGTAGTTTTTTTTTTGTGTAGTTGCCCTCTTGGTATGATTGTAAAAGTGAAAAGCTTAAATTCTTGGATGGAATTTTAATTATTGAAGACTCTAATACTCCTTTTATTTTTCAGAGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAGGTAACAACCTAGGCATTTATAGCTTATGCTTGCTTTGAGTTTCTTTCTCCCAATTTGACTCCCAGACAAATTTCTACTTCTCCAAGGATGAGTTGTCTGATTTACTACTCTGTTTAGTTTAAATGTGAGTTAATACTATAATGTGTTTCACGTCTAATACAATTATGAATTCCCATATTAGCAGGGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACC</genome_strand>
        <mrna_strand>ATTAGTTTCAAGTGCTATTCATTCTGATATTCCATTAGTTTCTAGAACCACAAAGGTAAAGATGTTCGACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTTTCTGGTAGCTTT-TGTTTTTTTGAGTTGCCAAACATGACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGAGCCAAGAGCACGAGATGACAGGGACAG........................................................................................................................................................................................GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGACCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAAAGAACCAGAGAAAGAGAAAAAGATCGCGGTCGTGACCGTGAT------CGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAAAGACCGGGATGGTCACCGTGAGCGAGATCGCCACCGCGAGAAGGACAGGGAAAAAGGTAAGGATGAAGGTGAGGTTGACCAGGGTCGTGAGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGAATCAAAACACGAGCGGGGACGACACGGTGACAAAGAAAGGAATTATGATCCTGCCGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278832" ref_strand="+" ref_description="SGN-E278832 [cLER-2-P9]">
      <seq>ggacttggaacaacaagagttggaaatgaagatgctactagagaggcggttcagcctggaagggcagcatctcgctctgaggagccaagagcacgagatgacagggatagggatcgggagaagtcccgtgaaagggtgcgagataaggacagagagaaatctcgtgagcgttctcatgacaggccaagggaacgtgaaagagatgacaaacatcatagggaacgcgagagaaccagagaaagagaaaaagatcgtggtcgtgaccgtgatcgagaccgcgaacgtgatatgacacgtgaccgtgagcgaggcaaagacagagaccgggatggtcaccgtgagcgagatcgtcaccgtgagaaggacagggaaagaggtagggatgaaggtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="88174" stop="86554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87874" g_stop="87834" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87833" i_stop="87390" i_length="444">
            <donor d_prob="0.937" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87389" g_stop="87321" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="110" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87136" g_stop="86854" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="393" r_length="283" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E278832" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87874" e_stop="87834"/>
          <exon e_start="87389" e_stop="87321"/>
          <exon e_start="87136" e_stop="86854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAGGTATTGCATGAACTTGTCATATGTGCATTGCATAGTGCTATAACGGACATTGATCTCAGCTCTTCTTTAGTGCAATAATGGTTCCTGTAGTGTCTATGGAGTAAGAACGCTATTTTGATAGATACAGCAAGACATGTTTGCTTGTAGTTGACATGAACTGCTTTTTTGAATTTCAACTCATCTTTTGGGTTATATGGATGCTTCAGTTTGTGTTTTTTTCCCTATAAAGGACTTGCTGCTCTGAGCATTTATGTATGACGTCTTGCTTAGAAGTTGAATTTATTATTGTTTGGCATTCAGTTTGATAATTACTCGTAAAATGTTCTTAAAAGTAGTTTTTTTTTTGTGTAGTTGCCCTCTTGGTATGATTGTAAAAGTGAAAAGCTTAAATTCTTGGATGGAATTTTAATTATTGAAGACTCTAATACTCCTTTTATTTTTCAGAGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAGGTAACAACCTAGGCATTTATAGCTTATGCTTGCTTTGAGTTTCTTTCTCCCAATTTGACTCCCAGACAAATTTCTACTTCTCCAAGGATGAGTTGTCTGATTTACTACTCTGTTTAGTTTAAATGTGAGTTAATACTATAATGTGTTTCACGTCTAATACAATTATGAATTCCCATATTAGCAGGGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAG</genome_strand>
        <mrna_strand>GGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG........................................................................................................................................................................................GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATATGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E422922" ref_strand="+" ref_description="SGN-E422922 [STM-41-A10]">
      <seq>attagtttcaagtgctattctttctgatattccattagtttctagaaccacaaaggtaaagatgttcgactcctacgtattttcctggtaagggtaaaacttaattttctggtagcttttgtttttttgagttgccaaacatgaccattcaatttccaagtccgagctacattacatgaaacaaagctgaggagccaagagcacgagatgacagggacagggatcgggagaagtcccgtgaaagggtgctagataaggacagagagaaatctcgtgagcgttctcatgacagaccaagggaacgtgaaagagatgacaaacatcatagggaacgcgaaagaacctcagacagagaaatagatcgcggtcgtgaccgtgatcgcgaacgtgatatgacacgtgaccgtgagcgaggcaaagacaaagaccgggatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="89157" stop="86663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88857" g_stop="88671" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88670" i_stop="87355" i_length="1316">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87354" g_stop="87321" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="220" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87136" g_stop="86915" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="436" r_length="216" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E422922" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E422922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88857" e_stop="88671"/>
          <exon e_start="87354" e_stop="87321"/>
          <exon e_start="87136" e_stop="86915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAGAAGATTGATAATAGAAGAGTGCTGGTTGATGTAGAACGTGGTAGAACAGTCCCCAATTGGCGTCCCCGCAGACTTGGTGGTGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAGGTATTGCATGAACTTGTCATATGTGCATTGCATAGTGCTATAACGGACATTGATCTCAGCTCTTCTTTAGTGCAATAATGGTTCCTGTAGTGTCTATGGAGTAAGAACGCTATTTTGATAGATACAGCAAGACATGTTTGCTTGTAGTTGACATGAACTGCTTTTTTGAATTTCAACTCATCTTTTGGGTTATATGGATGCTTCAGTTTGTGTTTTTTTCCCTATAAAGGACTTGCTGCTCTGAGCATTTATGTATGACGTCTTGCTTAGAAGTTGAATTTATTATTGTTTGGCATTCAGTTTGATAATTACTCGTAAAATGTTCTTAAAAGTAGTTTTTTTTTTGTGTAGTTGCCCTCTTGGTATGATTGTAAAAGTGAAAAGCTTAAATTCTTGGATGGAATTTTAATTATTGAAGACTCTAATACTCCTTTTATTTTTCAGAGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAGGTAACAACCTAGGCATTTATAGCTTATGCTTGCTTTGAGTTTCTTTCTCCCAATTTGACTCCCAGACAAATTTCTACTTCTCCAAGGATGAGTTGTCTGATTTACTACTCTGTTTAGTTTAAATGTGAGTTAATACTATAATGTGTTTCACGTCTAATACAATTATGAATTCCCATATTAGCAGGGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGG</genome_strand>
        <mrna_strand>ATTAGTTTCAAGTGCTATTCTTTCTGATATTCCATTAGTTTCTAGAACCACAAAGGTAAAGATGTTCGACTCCTACGTATTTTCCTGGTAAGGGTAAAACTTAATTTTCTGGTAGCTTT-TGTTTTTTTGAGTTGCCAAACATGACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGAGCCAAGAGCACGAGATGACAGGGACAG........................................................................................................................................................................................GGATCGGGAGAAGTCCCGTGAAAGGGTGCTAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGACCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAAAGAACCTCAGACAGAGAAATAGATCGCGGTCGTGACCGTGATC--G--C--GAACGTGATATGACACGTGACCGTGAGCGAGGCAAAGACAAAGACCGGGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E428203" ref_strand="+" ref_description="SGN-E428203 [STM-49-N2]">
      <seq>ccgctctcagctatcttctccatctctccaatcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccccgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagttacggctggaagaggatgctaaaaaagctgctgaagagcttgaaaatatgatcctagcagcgacccaatggtaccggagatccatacaagacactctttggtgcacgacttaatttatgaacaacagaaagcagagtccaacgcgaattcgaggcttatggtccaatcaagcgggttcgcttggttatggacaagacaaacaataaacccaggggttatgctttcattgagtttgtgcatacacgggatatgaaagctgcatataaacaagctgatggaaagaagattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92282" stop="87648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91982" g_stop="91787" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="312" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="392" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="467" r_length="75" r_score="0.921"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="0.88"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89790" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="531" r_length="64" r_score="0.908"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114">
            <donor d_prob="0.950" d_score="0.88"/>
            <acceptor a_prob="0.996" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89675" g_stop="89613" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="594" r_length="63" r_score="0.921"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89612" i_stop="88138" i_length="1475">
            <donor d_prob="0.866" d_score="0.96"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88137" g_stop="88056" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="676" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="88055" i_stop="87982" i_length="74">
            <donor d_prob="0.719" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="87981" g_stop="87948" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="710" r_length="34" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E428203" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E428203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91982" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89790"/>
          <exon e_start="89675" e_stop="89613"/>
          <exon e_start="88137" e_stop="88056"/>
          <exon e_start="87981" e_stop="87948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAA-TTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGGGTAGGTATTATAGAGCATCCCTTTTGGGGCTCAGGTTACTGGCTTTTGGTTGGTAAGATGTGTACTTTTATGGTGGCATGGTACTTCCTCCGTTTCTCAAATTGATATTTCCACAACTTATTATTTCTTAAAGCATAGAACATCTTACGATTTTAGCAGCTTCTCTTTATGTACTTCATAAAAAAAATTAGCATCTTATTAAAACAGATTTTGATAACCAAAATTTAAAGAACTGTGGGGTCGATACACTTTCTGAAATGAGGGTGGATTACCTAAAAGGAAGTGTCACTCATTACTCTTCTAAGTTTCAAACTTCCACTTAAAGGTGCATGCGATTCACATTCTGTGTATAAACTTATAGCATGGATTGCACTTCAGTATTTTGATAAGAACTTATTGAATTCGGCAGTTGTCTGTTAAATAATAAACTGATTAGCTCTCGACTTTCTTAGTGCTTCAGATCATCAAAAAACACGTTTTATCCGGAGAACTTTTTTTTCAATTGTATCTTTGGGTGCATCTCTTCAGGCTGTAGTTAAGAAATGGATTGTTTTTTAAACTGCTAGCACTCTTCCCTGGTGTTCGAGGTGCATACTGCTCTCTGAAAATGGGTGATTTTTTTTGTGAAGTTACTAGTTTTTCTTTGCTTTGTAAAATAAAGGTCAGATTGCCAGTATGCCCTTCCTCAGGTAACAGTACTCCAATTATTGAGTATCAGTTTGATGCCTTTATCCTCTTATCCTGGTTTGGATATCATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAGAAGATTGA</genome_strand>
        <mrna_strand>CCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCCGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGTTACGGCTGGAAGAGGATGCTAAAAAAGCTGCTGAAGAGCTTG-AAAAT................................................................................ATGATCCTAGCAGCGACCC-AATGGTACCGGAGATCCATACAAGACACTCTTTGGTGCACGACTT..................................................................................................................AATTTATGA-ACAACAGAAAGCAGAGTCCAACGCGAATTCGAGGCTTATGGTCCAATCAAGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTTTGTGCATACACGGGATATGAAAG..........................................................................CTGCATATAAACAAGCTGATGGAAAGAAGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E479166" ref_strand="+" ref_description="SGN-E479166 [cSTD-8-L18]">
      <seq>ccgctctcagctatcttctccatctctccaatcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccccgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagttacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgttaccggagatccatacaagacactctttgttgcacgacttaattatgaaacaacagaaagcagagtcaaacgcgaattcgaggcttatggtccaatcaagcgggttcgcttggttatggacaagacaaacaataacccaggggttatgctttcattgagtttgtgcatacacgggatatgaaagctgcatataacaagctgatggaaagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92282" stop="87653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91982" g_stop="91787" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="312" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="392" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="468" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89790" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="533" r_length="65" r_score="0.938"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114">
            <donor d_prob="0.950" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89675" g_stop="89613" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="596" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89612" i_stop="88138" i_length="1475">
            <donor d_prob="0.866" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88137" g_stop="88056" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="677" r_length="81" r_score="0.976"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="88055" i_stop="87982" i_length="74">
            <donor d_prob="0.719" d_score="0.98"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="87981" g_stop="87953" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="705" r_length="28" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E479166" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91982" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89790"/>
          <exon e_start="89675" e_stop="89613"/>
          <exon e_start="88137" e_stop="88056"/>
          <exon e_start="87981" e_stop="87953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGGGTAGGTATTATAGAGCATCCCTTTTGGGGCTCAGGTTACTGGCTTTTGGTTGGTAAGATGTGTACTTTTATGGTGGCATGGTACTTCCTCCGTTTCTCAAATTGATATTTCCACAACTTATTATTTCTTAAAGCATAGAACATCTTACGATTTTAGCAGCTTCTCTTTATGTACTTCATAAAAAAAATTAGCATCTTATTAAAACAGATTTTGATAACCAAAATTTAAAGAACTGTGGGGTCGATACACTTTCTGAAATGAGGGTGGATTACCTAAAAGGAAGTGTCACTCATTACTCTTCTAAGTTTCAAACTTCCACTTAAAGGTGCATGCGATTCACATTCTGTGTATAAACTTATAGCATGGATTGCACTTCAGTATTTTGATAAGAACTTATTGAATTCGGCAGTTGTCTGTTAAATAATAAACTGATTAGCTCTCGACTTTCTTAGTGCTTCAGATCATCAAAAAACACGTTTTATCCGGAGAACTTTTTTTTCAATTGTATCTTTGGGTGCATCTCTTCAGGCTGTAGTTAAGAAATGGATTGTTTTTTAAACTGCTAGCACTCTTCCCTGGTGTTCGAGGTGCATACTGCTCTCTGAAAATGGGTGATTTTTTTTGTGAAGTTACTAGTTTTTCTTTGCTTTGTAAAATAAAGGTCAGATTGCCAGTATGCCCTTCCTCAGGTAACAGTACTCCAATTATTGAGTATCAGTTTGATGCCTTTATCCTCTTATCCTGGTTTGGATATCATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAGAAG</genome_strand>
        <mrna_strand>CCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCCGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGTTACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACCCAAATGTTACCGGAGATCCATACAAGACACTCTTTGTTGCACGACTT..................................................................................................................AATTATGAAACAACAGAAAGCAGAGTCAAACGCGAATTCGAGGCTTATGGTCCAATCAAGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTTGGTTATGGACAAGACAAACAAT-AACCCAGGGGTTATGCTTTCATTGAGTTTGTGCATACACGGGATATGAAAG..........................................................................CTGCATAT-AACAAGCTGATGGAAAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698225" ref_strand="+" ref_description="SGN-E698225 [FA05CE12]">
      <seq>cgttcgattaacgtaactccacttcttgtggcggcgattcccatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagttgtttgagccccgaccacctttggagtacaaaccaccccctgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagatacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgctaccggggatccatacaagacactatttgttgcaagacttaattatgagacaacagaaagcagagtccaacgcgaatttgaggcttatggtccaatcaagcgggttcgcttggttatggacaagacaaacaataaacccaggggttatgctttcattgagtatgtgccatacacgggatatgaaagctgcgtataaacaagctgatggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92251" stop="87656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91951" g_stop="91787" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="280" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="360" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="436" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89790" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="501" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89675" g_stop="89613" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="564" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89612" i_stop="88138" i_length="1475">
            <donor d_prob="0.866" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88137" g_stop="88056" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="647" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="88055" i_stop="87982" i_length="74">
            <donor d_prob="0.719" d_score="0.96"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="87981" g_stop="87956" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="673" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E698225" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91951" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89790"/>
          <exon e_start="89675" e_stop="89613"/>
          <exon e_start="88137" e_stop="88056"/>
          <exon e_start="87981" e_stop="87956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGGGTAGGTATTATAGAGCATCCCTTTTGGGGCTCAGGTTACTGGCTTTTGGTTGGTAAGATGTGTACTTTTATGGTGGCATGGTACTTCCTCCGTTTCTCAAATTGATATTTCCACAACTTATTATTTCTTAAAGCATAGAACATCTTACGATTTTAGCAGCTTCTCTTTATGTACTTCATAAAAAAAATTAGCATCTTATTAAAACAGATTTTGATAACCAAAATTTAAAGAACTGTGGGGTCGATACACTTTCTGAAATGAGGGTGGATTACCTAAAAGGAAGTGTCACTCATTACTCTTCTAAGTTTCAAACTTCCACTTAAAGGTGCATGCGATTCACATTCTGTGTATAAACTTATAGCATGGATTGCACTTCAGTATTTTGATAAGAACTTATTGAATTCGGCAGTTGTCTGTTAAATAATAAACTGATTAGCTCTCGACTTTCTTAGTGCTTCAGATCATCAAAAAACACGTTTTATCCGGAGAACTTTTTTTTCAATTGTATCTTTGGGTGCATCTCTTCAGGCTGTAGTTAAGAAATGGATTGTTTTTTAAACTGCTAGCACTCTTCCCTGGTGTTCGAGGTGCATACTGCTCTCTGAAAATGGGTGATTTTTTTTGTGAAGTTACTAGTTTTTCTTTGCTTTGTAAAATAAAGGTCAGATTGCCAGTATGCCCTTCCTCAGGTAACAGTACTCCAATTATTGAGTATCAGTTTGATGCCTTTATCCTCTTATCCTGGTTTGGATATCATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTG-CATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAG</genome_strand>
        <mrna_strand>CGTTCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCCCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTT..................................................................................................................AATTATGAGACAACAGAAAGCAGAGTCCAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCCATACACGGGATATGAAAG..........................................................................CTGCGTATAAACAAGCTGATGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E599715" ref_strand="+" ref_description="SGN-E599715 [52709]">
      <seq>cagctatcttctccatctctccaatcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccccgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagttacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgttaccggagatccatacaagacactctttgttgcacgacttaattatgaaacaacagaaagcagagtcaaacgcgaattcgaggcttatggtccagatcaagcgggttcgcttggttatggacaagacaaacaataaaacccaggggttatgctttcattgattttgtggcatacacgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92276" stop="87766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91976" g_stop="91787" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="305" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="385" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="461" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89790" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="526" r_length="65" r_score="0.938"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114">
            <donor d_prob="0.950" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89675" g_stop="89613" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="590" r_length="64" r_score="0.937"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89612" i_stop="88138" i_length="1475">
            <donor d_prob="0.866" d_score="0.94"/>
            <acceptor a_prob="0.962" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88137" g_stop="88066" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="664" r_length="74" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E599715" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E599715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91976" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89790"/>
          <exon e_start="89675" e_stop="89613"/>
          <exon e_start="88137" e_stop="88066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCA-ATCAAGCGGGTAGGTATTATAGAGCATCCCTTTTGGGGCTCAGGTTACTGGCTTTTGGTTGGTAAGATGTGTACTTTTATGGTGGCATGGTACTTCCTCCGTTTCTCAAATTGATATTTCCACAACTTATTATTTCTTAAAGCATAGAACATCTTACGATTTTAGCAGCTTCTCTTTATGTACTTCATAAAAAAAATTAGCATCTTATTAAAACAGATTTTGATAACCAAAATTTAAAGAACTGTGGGGTCGATACACTTTCTGAAATGAGGGTGGATTACCTAAAAGGAAGTGTCACTCATTACTCTTCTAAGTTTCAAACTTCCACTTAAAGGTGCATGCGATTCACATTCTGTGTATAAACTTATAGCATGGATTGCACTTCAGTATTTTGATAAGAACTTATTGAATTCGGCAGTTGTCTGTTAAATAATAAACTGATTAGCTCTCGACTTTCTTAGTGCTTCAGATCATCAAAAAACACGTTTTATCCGGAGAACTTTTTTTTCAATTGTATCTTTGGGTGCATCTCTTCAGGCTGTAGTTAAGAAATGGATTGTTTTTTAAACTGCTAGCACTCTTCCCTGGTGTTCGAGGTGCATACTGCTCTCTGAAAATGGGTGATTTTTTTTGTGAAGTTACTAGTTTTTCTTTGCTTTGTAAAATAAAGGTCAGATTGCCAGTATGCCCTTCCTCAGGTAACAGTACTCCAATTATTGAGTATCAGTTTGATGCCTTTATCCTCTTATCCTGGTTTGGATATCATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAAT-AAACCCAGGGGTTATGCTTTCATTGAGTATGT-GCATACACGG</genome_strand>
        <mrna_strand>CAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCCGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGTTACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACCCAAATGTTACCGGAGATCCATACAAGACACTCTTTGTTGCACGACTT..................................................................................................................AATTATGAAACAACAGAAAGCAGAGTCAAACGCGAATTCGAGGCTTATGGTCCAGATCAAGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTTGGTTATGGACAAGACAAACAATAAAACCCAGGGGTTATGCTTTCATTGATTTTGTGGCATACACGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418414" ref_strand="+" ref_description="SGN-E418414 [STM-27-O12]">
      <seq>agccgcttctcttcgccggataaacccttgtttatattttggttttcgtgccgctctcagctatcttctccatctctccaatcgtccgatttacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccctgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagttacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgttaccggagatccatacaagacactctttgttgcaagacttaattatgagacaacagaaagcagagtcaaacgcgaattcgaggcttatggtccaatcaagcgggttcgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92332" stop="89311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92032" g_stop="91787" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="362" r_length="115" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="442" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="518" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89790" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="583" r_length="65" r_score="0.954"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114">
            <donor d_prob="0.950" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89675" g_stop="89613" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="646" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E418414" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92032" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89790"/>
          <exon e_start="89675" e_stop="89613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCGCTTCTCTGCGCCGGATAAACCCTTGTTTCTATTTTGTTCTTCGTGCCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG</genome_strand>
        <mrna_strand>AGCCGCTTCTCTTCGCCGGATAAACCCTTGTTTATATTTTGGTTTTCGTGCCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTTACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGTTACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACCCAAATGTTACCGGAGATCCATACAAGACACTCTTTGTTGCAAGACTT..................................................................................................................AATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTCGAGGCTTATGGTCCAATCAAGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E481421" ref_strand="+" ref_description="SGN-E481421 [cSTD-18-K13]">
      <seq>cgcttctcttcgccggataaacccttgtttctattttggttttcgtgccgctctcagctatcttctccatctctccaatcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccccgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagttacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgttaccggagatccatacaagacactctttgntgcacgacttaattatgaaacaacagaaagcagagtcaaacgcgaattcgaggcttatggtccaatcaagcgggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92329" stop="89311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92029" g_stop="91787" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="359" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="439" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="515" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89790" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="580" r_length="65" r_score="0.923"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114">
            <donor d_prob="0.950" d_score="0.90"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89675" g_stop="89613" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="643" r_length="63" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E481421" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E481421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92029" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89790"/>
          <exon e_start="89675" e_stop="89613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTCTCTGCGCCGGATAAACCCTTGTTTCTATTTTGTTCTTCGTGCCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG</genome_strand>
        <mrna_strand>CGCTTCTCTTCGCCGGATAAACCCTTGTTTCTATTTTGGTTTTCGTGCCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCCGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGTTACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACCCAAATGTTACCGGAGATCCATACAAGACACTCTTTGNTGCACGACTT..................................................................................................................AATTATGAAACAACAGAAAGCAGAGTCAAACGCGAATTCGAGGCTTATGGTCCAATCAAGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E417290" ref_strand="+" ref_description="SGN-E417290 [STM-25-K23]">
      <seq>gccgcttctcttcgccggataaacccttgtttctattttggttttcgtgcccgctctcagctatcttctccatctctccaatcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccccgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagttacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92331" stop="89537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92031" g_stop="91787" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="362" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90730" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="442" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90010" g_stop="89935" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="518" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80">
            <donor d_prob="0.606" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89854" g_stop="89837" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="536" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E417290" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417290" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92031" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90730"/>
          <exon e_start="90010" e_stop="89935"/>
          <exon e_start="89854" e_stop="89837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCTTCTCTGCGCCGGATAAACCCTTGTTTCTATTTTGTTCTTCGTG-CCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACC</genome_strand>
        <mrna_strand>GCCGCTTCTCTTCGCCGGATAAACCCTTGTTTCTATTTTGGTTTTCGTGCCCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCCGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGTTACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E445877" ref_strand="+" ref_description="SGN-E445877 [cSTA-19-I23]">
      <seq>gccgcttctcttcgccggataaacccttgtttctattttggttttcgtgccgctctcagctatcttctccatctctccaatcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccccgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92331" stop="90444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92031" g_stop="91787" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="361" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90744" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="427" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E445877" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92031" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGCTTCTCTGCGCCGGATAAACCCTTGTTTCTATTTTGTTCTTCGTGCCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTG</genome_strand>
        <mrna_strand>GCCGCTTCTCTTCGCCGGATAAACCCTTGTTTCTATTTTGGTTTTCGTGCCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCCGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E568197" ref_strand="+" ref_description="SGN-E568197 [12442]">
      <seq>gtctttatatgagccgcttctcttcggccggataaaccctttgtatctattgttggtttgcgtagccgctctcagctatcttctccatctctccaagtcgtccgattaacgtaactccacttcttgtggcggcgattcgcatctagcaaaaacctagtctggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgatttggtcaattgtcatccaactgggttgactgctaatcttctgaagctgtttgagccccggccgactttggagtacaaaccacccccgagaagagaaaatgcccttgcatatactgggatggcacaatctgttacgtaacttcgctcaaactggtgatccagaatatgctccaacaatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92343" stop="90446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92043" g_stop="91787" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="380" r_length="117" r_score="0.896"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="0.94"/>
            <acceptor a_prob="0.985" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90746" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="445" r_length="65" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E568197" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92043" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTTATATAAGCCGCTTCTCTGC-GCCGGATAAACCC-TTGTTTCTATT-TTGTTCTTCGT-GCCGC-CTCAGCTATCTTCTCCATCTCTCCAA-TCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTC-GGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGA-TTGGTCAA-AGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTT-CATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTA-GTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCC</genome_strand>
        <mrna_strand>GTCTTTATATGAGCCGCTTCTCTTCGGCCGGATAAACCCTTTGTATCTATTGTTGGTTTGCGTAGCCGCTCTCAGCTATCTTCTCCATCTCTCCAAGTCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAA-CCTAGTCTGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGTCAATTGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGGCCGACTTTGGAGTACAAACCACCCCC-GAGAAGAGAAAATGCCCTTGCATATACTG......................................................................................GGATGGCACAATCTGTTACGTAACTTCGCTCAAACTGGTGATCCAGAATATGCTCCAACAATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E441533" ref_strand="+" ref_description="SGN-E441533 [cSTA-30-D24]">
      <seq>agccgcttctcttcgccggataaacccttgtttatattttggttttcgtgccgctctcagctatcttctccatctctccaatcgtccgatttacgtaactccacttcttgtggcggcgattcgcatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagctgtttgagccccgcccacctttggagtacaaaccaccccctgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccacaatatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="92332" stop="90457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92032" g_stop="91787" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91010" g_stop="90896" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="362" r_length="115" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90809" g_stop="90757" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="415" r_length="53" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E441533" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E441533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92032" e_stop="91787"/>
          <exon e_start="91010" e_stop="90896"/>
          <exon e_start="90809" e_stop="90757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCGCTTCTCTGCGCCGGATAAACCCTTGTTTCTATTTTGTTCTTCGTGCCGC-CTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCT</genome_strand>
        <mrna_strand>AGCCGCTTCTCTTCGCCGGATAAACCCTTGTTTATATTTTGGTTTTCGTGCCGCTCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTTACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGCTGTTTGAGCCCCGCCCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCACAATATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E361855" ref_strand="+" ref_description="SGN-E361855 [cLPP-12-P13]">
      <seq>tacatctttcaggagcattgaagatttgttgagacgagcagttaacgggagaggttgaatttctgggctgccggaaatttcaccgttgttgaaatatgcaatcacctcctagtactgcttcgtccgacaaagatgacactacttcctcctctccttctaattcctccccgtctcccccaccaccagctccgcctacctccccacccccagaatctcctccacctgtaaattctccgccgccgtcaaaggaatcttctcctccgtcatcaccaccaccctcagcttctgaatcaccaccacctccgtcagattccacttccacatcacccaatgctcctgaggcgtctcctcctacctcatccaaatttaatcctccaccaccagtttcctcaggatcaccttcattatctgctggaaaattttctcctcctccaccttcagaaaaatcagcaccttttgaaaaaccagacggtgcacaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="96779" stop="95705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96592" g_stop="96581" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96580" i_stop="96475" i_length="106">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96474" g_stop="96005" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="482" r_length="470" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E361855" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E361855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96592" e_stop="96581"/>
          <exon e_start="96474" e_stop="96005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACATCTTTCAGGTAAATTTCTTCTCTTTCATGTCCAAATTGAATCATTTTTATTACTATATGTTGTGTAGGATCTGTAAAGATAACATTTTTTTTTTCGTTTTTCATGGAAATATAGGAGCATTGAAGATTTGTTGAGACGAGCAGCTAACGGGAGAGGTTGAATTTCTGGGCTGCCGGAAATTTCACCGTTGTTGAAATATGCAATCACCTCCTAGTACTGCTTCGTCCGACAAAGATGAGACTACTTCCTCTTCTCCTTCTAATTCCTCCCCGTCTCCCCCACCACCAGCTCCGCCTACCTCCCCACCCCCAGAATCTCCTCCACCTGTAAATTCTCCGCCACCGTCAAAGGAATCTTCTCCTCCGTCATCACCACCACCCTCAGCTTCTGAATCACCACCACCTCCGTCAGATTCCACTACCACGTCACTCAATGCTCCTGAGGCGTCTCCTCCTACCTCATCCAAATTTAATCCTCCACCACCAGTTTCCTCAGGATCACCTTCATTATCTGCTGGAAAATTATCTCCTCCTCCACCTTCAGAAAAATCAGCACCTTTTGAAAAACCAGACGGTGCACAACAT</genome_strand>
        <mrna_strand>TACATCTTTCAG..........................................................................................................GAGCATTGAAGATTTGTTGAGACGAGCAGTTAACGGGAGAGGTTGAATTTCTGGGCTGCCGGAAATTTCACCGTTGTTGAAATATGCAATCACCTCCTAGTACTGCTTCGTCCGACAAAGATGACACTACTTCCTCCTCTCCTTCTAATTCCTCCCCGTCTCCCCCACCACCAGCTCCGCCTACCTCCCCACCCCCAGAATCTCCTCCACCTGTAAATTCTCCGCCGCCGTCAAAGGAATCTTCTCCTCCGTCATCACCACCACCCTCAGCTTCTGAATCACCACCACCTCCGTCAGATTCCACTTCCACATCACCCAATGCTCCTGAGGCGTCTCCTCCTACCTCATCCAAATTTAATCCTCCACCACCAGTTTCCTCAGGATCACCTTCATTATCTGCTGGAAAATTTTCTCCTCCTCCACCTTCAGAAAAATCAGCACCTTTTGAAAAACCAGACGGTGCACAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E374767" ref_strand="+" ref_description="SGN-E374767 [TUS-14-D12](-)">
      <seq>cattcgatgtgaaaaatgagattccagcagttctacatttacctgttcttcaatctggacaacgtggtgccttgacgcagataggagatgaggtttgctatgttactgcttataatgactgtggaagtgttttcataatagacatctatggaggtgtagacatgggcctgaagcgcagtgtcagtgtaaatcttggtagcaagaagcctcgtactcaagtgcttggaatacccaatgagaagtgttgtgaggtactaccttgtactgtcagtgatactgtggtgatccacacggacacaacaatatacttttatcaccttagggaccagaaggttgagacactgcagagtccgggacgagtggatactgataagaggttcttaccctacataaacagccttgttatggtacacaatgctggagaataacccaagggagcagaacagtgtggagtctgggacgaatactgatgagaggttctcagcctacataagctgcctcgttatgttacaaggatctggagaatatgaagtagtgcccttgatgattgtttcatttgggctagtagtatgatttgtttttgtcctccagtcattttactttcttgctgctagttttcagttttggttctaaacaagtgcaaactgttggaattgtatagtcaggttctcttttgacgataatacttacagtttggaactaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="98075" stop="96767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97775" g_stop="97066" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="710" r_length="710" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E374767" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97775" e_stop="97066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCGATGTGAAAAATGAGATTCCAGCAGTTCTACATTTACCTGTTCTTCAATCTGGACAACGTGGTGCCTTGACGCAGATAGGAGATGAGGTTTGCTATGTTACTGCTTATAATGACTGTGGAAGTGTTTTCATAATAGACATCTATGGAGGTGTAGACATGGGCCTGAAGCGCAGTGTCAGTGTAAATCTTGGTAGCAAGAAGCCTCGTACTCAAGTGCTTGGAATACCCAATGAGAAGTGTTGTGAGGTACTACCTTGTACTGTCAGTGATACTGTGGTGATCCACACGGACACAACAATATACTTTTATCACCTTAGGGACCAGAAGGTTGAGACACTGCAGAGTCCGGGACGAGTGGATACTGATAAGAGGTTCTTACCCTACATAAACAGCCTTGTTATGGTACACAATGCTGGAGAATAACCCAAGGGAGCAGAACAGTGTGGAGTCTGGGACGAATACTGATGAGAGGTTCTCAGCCTACATAAGCTGCCTCGTTATGTTACAAGGATCTGGAGAATATGAAGTAGTGCCCTTGATGATTGTTTCATTTGGGCTAGTAGTATGATTTGTTTTTGTCCTCCAGTCATTTTACTTTCTTGCTGCTAGTTTTCAGTTTTGGTTCTAAACAAGTGCAAACTGTTGGAATTGTATAGTCAGGTTCTCTTTTGACGATAATACTTACAGTTTGGAACTATTACATAT</genome_strand>
        <mrna_strand>CATTCGATGTGAAAAATGAGATTCCAGCAGTTCTACATTTACCTGTTCTTCAATCTGGACAACGTGGTGCCTTGACGCAGATAGGAGATGAGGTTTGCTATGTTACTGCTTATAATGACTGTGGAAGTGTTTTCATAATAGACATCTATGGAGGTGTAGACATGGGCCTGAAGCGCAGTGTCAGTGTAAATCTTGGTAGCAAGAAGCCTCGTACTCAAGTGCTTGGAATACCCAATGAGAAGTGTTGTGAGGTACTACCTTGTACTGTCAGTGATACTGTGGTGATCCACACGGACACAACAATATACTTTTATCACCTTAGGGACCAGAAGGTTGAGACACTGCAGAGTCCGGGACGAGTGGATACTGATAAGAGGTTCTTACCCTACATAAACAGCCTTGTTATGGTACACAATGCTGGAGAATAACCCAAGGGAGCAGAACAGTGTGGAGTCTGGGACGAATACTGATGAGAGGTTCTCAGCCTACATAAGCTGCCTCGTTATGTTACAAGGATCTGGAGAATATGAAGTAGTGCCCTTGATGATTGTTTCATTTGGGCTAGTAGTATGATTTGTTTTTGTCCTCCAGTCATTTTACTTTCTTGCTGCTAGTTTTCAGTTTTGGTTCTAAACAAGTGCAAACTGTTGGAATTGTATAGTCAGGTTCTCTTTTGACGATAATACTTACAGTTTGGAACTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E202298" ref_strand="+" ref_description="SGN-E202298 [cLEC-6-G12]">
      <seq>agggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatacttttgtctctgcatcgttctgcaattggagtcccgagtccttcacttcgtttcttgcctgtgaaggttaaagtactaagttctagcagcgggttgctcctttgtcaagggaaggacagctattatgtttgcaatcctgcaaccaaagactggaaaaagcttcctcctcctcaatattaccacggatctgatcctgctgttgctcttgcatttgatcctcagttcaatattgaatcattttatcgtgtggtcgctgcagtccctgttcttgataatccagttgtatgctttgagatttactgttctgaatcagattcatggaggtgctctccttcagactgtctagagctggaaaatacaagacttgcaggtggaggatattatatgaagggggtggcttactggaggaatacatcatcgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="98755" stop="97485"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98455" g_stop="97785" g_length="671"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="671" r_length="671" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E202298" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98455" e_stop="97785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGAAGGGGGTGGCTTACTGGAGGAATACATCATCGAATG</genome_strand>
        <mrna_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGAAGGGGGTGGCTTACTGGAGGAATACATCATCGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E374768" ref_strand="+" ref_description="SGN-E374768 [TUS-14-D12]">
      <seq>agggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatacttttgtctctgcatcgttctgcaattggagtcccgagtccttcacttcgtttcttgcctgtgaaggttaaagtactaagttctagcagcgggttgctcctttgtcaagggaaggacagctattatgtttgcaatcctgcaaccaaagactggaaaaagcttcctcctcctcaatattaccacggatctgatcctgctgttgctcttgcatttgatcctcagttcaatattgaatcattttatcgtgtggtcgctgcagtccctgttcttgataatccagttgtatgctttgagatttactgttctgaatcagattcatggaggtgctctccttcagactgtctagagctggaaaatacaagacttgcaggtggaggatattatatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="98755" stop="97521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98455" g_stop="97821" g_length="635"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E374768" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374768" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98455" e_stop="97821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGA</genome_strand>
        <mrna_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E207154" ref_strand="+" ref_description="SGN-E207154 [cLEC-30-O23]">
      <seq>agggaacaatgggtctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaaggtcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatacttttgtctctgcatcgttctgcaattggagtcccgagtccttcacttcgtttcttgcctgtgaaggttaaagtactaagttctagcaacgggttgctcctttgtcaagggaaggacagctattatgtttgcaatcctgcaaccaaagactggaaaaagcttcctcctcctcaatattaccacggatctgatcctgctgttgctcttgcatttgatcctcagttcaatattgaatcattttatcgtgtggtcgctgcagtccctgttcttgataatccaattgtatgctttgagatttactgttctgaatcagattcatggaggtgctctcctttaaactgtctacagctggaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="98755" stop="97552"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98455" g_stop="97852" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E207154" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98455" e_stop="97852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAAT</genome_strand>
        <mrna_strand>AGGGAACAATGGGTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGGTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAACGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAATTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTTAAACTGTCTACAGCTGGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209227" ref_strand="+" ref_description="SGN-E209227 [cLEC-53-E5]">
      <seq>agggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatacttttgtctctgcatcgttctgcaattggagtcccgagtccttcacttcgtttcttgcctgtgaaggttaaagtactaagttctagcagcgggttgctcctttgtcaagggaaggacagctattatgtttgcaatcctgcaaccaaagactggaaaaagcttcctcctcctcaatattaccacggatctgatcctgctgttgctcttgcatttgatcctcagttcaatattgaatcattttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="98755" stop="97665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98455" g_stop="97965" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E209227" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98455" e_stop="97965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATC</genome_strand>
        <mrna_strand>AGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E321634" ref_strand="+" ref_description="SGN-E321634 [cTOB-25-N13]">
      <seq>gattctttgccattctttcttggttttccggcgactttactcaccagaattttagcgcattgcacttttacagtgaaatttcttgaaacccaagttatcatcaagggctctgctgatagaaaaatggcatgttctgggattgacatgctgaatgatgaatctttggaggaggacatgtattctgactcctctgagttttacgttgctgttaaacctcagggtggtgggattgactcgttagcagagtttgacttgagaactgctgcttataaggtggaggaagggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatacttttgtctctgcatcgttctgcaattggagtcccgagtccttcacttcgtttcttgcctgtgaaggttaaagtactaagttctagcagcgggttgctcctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="100218" stop="97805"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99918" g_stop="99851" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99850" i_stop="99510" i_length="341">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99509" g_stop="99459" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="119" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99458" i_stop="99368" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99367" g_stop="99250" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="237" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99249" i_stop="98500" i_length="750">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98499" g_stop="98105" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="632" r_length="395" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E321634" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99918" e_stop="99851"/>
          <exon e_start="99509" e_stop="99459"/>
          <exon e_start="99367" e_stop="99250"/>
          <exon e_start="98499" e_stop="98105"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTTGTGAGTTCTTCTTCTTCTTAATTCTTCTGTTGCTTACCGGTACTGATCATCACATGCTGTTGTTTATTTATTTAAAAAAAAAATAAGAAAAAATACTGAATTTCTCCGTTTTACAATTGCTGATCAATTTTGTCATGAAAAGATAGGATCATTTTCGTTTTTCTTTTGATCCAATTTTTGGTAGTGTTGTTGTTTCCTTTACATCTTCGAATGTATCGTTTTATGTTCTTGCTTTCTTGAGGAAATAAATGTAGCTATATTTAGTGCTCTATTCAATCTGGGGTTTTCTTGTTTCTTCTTTTTTTCGTTACTAATATTTTTCGTGATTTTCTCATTTACAGTACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAGGTGATACGGAGATGAATTTCTTGATTTTCTCATTTTCATATTATTATTTTTGTTAAGTAATAGACGCTGTAATTTTTAAATGTCTATGCAGAAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCGGTATAGTTTTCTTCCCTTTTATTTCGCTTTCTTGTTTCTTGTTTCAATTGTTCAACAGTTCTTTTTTTTTTATCATCGTCTCTTCTATCCAACTTTCTAATGTTACTTTTTACTTGCTTTGGGATGTTAAGGTCTTGAAATCTCAATAGCAGAACTTGAAGTTTCTTGTTGAACGTTAATGTCCTTTTTTTGTGTCTTAAATGACTTATACTGAACATGACTCTATACTTTGCGTTTTCATGTTTTTTATTTCTAAGTGGTGGTTTCTAAGATGTCCATTTCGAAATTGGCAGATGGCAGATGTATTAAAGTAGTGTAAGTTAGTCCTCATAAATGTCCTTGGATCTCAGTTCTGCCCTATTCCGGTTTGCCTAAAGTTACAATTGTAACAATGACCTCAATTCCAAGCTAGTTTGGGCCAAATGTACTAATCCACTATCCTTTTATTTTCACAATGCCATGGTGTCATGGACAATCTCTGCTTCCCTGTTTTGCTAGGAAGCTACTTCATAAGATCTTGCTTTCTAGTCCTGATTTTTCTATTGTTCCTTTTCCCATTTTTCTTACATTAATGAATATATTTACTTTTTAAATGAGTCTTTCTGAGTGAACAACATGCCTAGCCTAAAAAGAGGAGTGGATACAAATATAGATCATCCTAACTAGTATGATATTGCAGCATAGTTAGTATATCGCTCTTGCTAATGATTACTGTACTACTTTTAACAAGTCTTTCGGTTTGGATTGCAGTTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTG</genome_strand>
        <mrna_strand>GATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTT.....................................................................................................................................................................................................................................................................................................................................................TACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAG...........................................................................................AAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E321841" ref_strand="+" ref_description="SGN-E321841 [cTOB-25-N14]">
      <seq>gattctttgccattctttcttggttttccggcgactttactcaccagaattttagcgcattgcacttttacagtgaaatttcttgaaacccaagttatcatcaagggctctgctgatagaaaaatggcatgttctgggattgacatgctgaatgatgaatctttggaggaggacatgtattctgactcctctgagttttacgttgctgttaaacctcagggtggtgggattgactcgttagcagagtttgacttgagaactgctgcttataaggtggaggaagggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgatcctcctatnactttgtctctgcatcgttctgcaattggagtcccgagtcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="100218" stop="97866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99918" g_stop="99851" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99850" i_stop="99510" i_length="341">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99509" g_stop="99459" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="119" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99458" i_stop="99368" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99367" g_stop="99250" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="237" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99249" i_stop="98500" i_length="750">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98499" g_stop="98166" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="571" r_length="334" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E321841" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99918" e_stop="99851"/>
          <exon e_start="99509" e_stop="99459"/>
          <exon e_start="99367" e_stop="99250"/>
          <exon e_start="98499" e_stop="98166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTTGTGAGTTCTTCTTCTTCTTAATTCTTCTGTTGCTTACCGGTACTGATCATCACATGCTGTTGTTTATTTATTTAAAAAAAAAATAAGAAAAAATACTGAATTTCTCCGTTTTACAATTGCTGATCAATTTTGTCATGAAAAGATAGGATCATTTTCGTTTTTCTTTTGATCCAATTTTTGGTAGTGTTGTTGTTTCCTTTACATCTTCGAATGTATCGTTTTATGTTCTTGCTTTCTTGAGGAAATAAATGTAGCTATATTTAGTGCTCTATTCAATCTGGGGTTTTCTTGTTTCTTCTTTTTTTCGTTACTAATATTTTTCGTGATTTTCTCATTTACAGTACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAGGTGATACGGAGATGAATTTCTTGATTTTCTCATTTTCATATTATTATTTTTGTTAAGTAATAGACGCTGTAATTTTTAAATGTCTATGCAGAAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCGGTATAGTTTTCTTCCCTTTTATTTCGCTTTCTTGTTTCTTGTTTCAATTGTTCAACAGTTCTTTTTTTTTTATCATCGTCTCTTCTATCCAACTTTCTAATGTTACTTTTTACTTGCTTTGGGATGTTAAGGTCTTGAAATCTCAATAGCAGAACTTGAAGTTTCTTGTTGAACGTTAATGTCCTTTTTTTGTGTCTTAAATGACTTATACTGAACATGACTCTATACTTTGCGTTTTCATGTTTTTTATTTCTAAGTGGTGGTTTCTAAGATGTCCATTTCGAAATTGGCAGATGGCAGATGTATTAAAGTAGTGTAAGTTAGTCCTCATAAATGTCCTTGGATCTCAGTTCTGCCCTATTCCGGTTTGCCTAAAGTTACAATTGTAACAATGACCTCAATTCCAAGCTAGTTTGGGCCAAATGTACTAATCCACTATCCTTTTATTTTCACAATGCCATGGTGTCATGGACAATCTCTGCTTCCCTGTTTTGCTAGGAAGCTACTTCATAAGATCTTGCTTTCTAGTCCTGATTTTTCTATTGTTCCTTTTCCCATTTTTCTTACATTAATGAATATATTTACTTTTTAAATGAGTCTTTCTGAGTGAACAACATGCCTAGCCTAAAAAGAGGAGTGGATACAAATATAGATCATCCTAACTAGTATGATATTGCAGCATAGTTAGTATATCGCTCTTGCTAATGATTACTGTACTACTTTTAACAAGTCTTTCGGTTTGGATTGCAGTTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTT</genome_strand>
        <mrna_strand>GATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTT.....................................................................................................................................................................................................................................................................................................................................................TACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAG...........................................................................................AAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATNACTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E316797" ref_strand="+" ref_description="SGN-E316797 [cTOB-6-A21]">
      <seq>tcgttagggttttccggcgattctttgccattctttcttggttttccggcgactttactcaccagaattttagcgcattgcacttttacagtgaaatttcttgaaacccaagttatcatcaagggctctgctgatagaaaaatggcatgttctgggattgacatgctgaatgatgaatctttggaggaggacatgtattctgactcctctgagttttacgttgctgttaaacctcagggtggtgggattgactcgttagcagagtttgacttgagaactgctgcttataaggtggaggaagggaacaatggttctaaatatcctgtcgaaatcataatgagagtgaacatgacgatcaaagatgtagcgaagagacatatactgcctttcctccccgctaaatcactgatgaagcttcgggcagtctccaaagaatggaatcagtggatagctagtccattacttgcgtacaatcaaagttcaacatttcagaagctttcaggctacttttatcaaagactggataatgtagatgaccctcctatacttttgtctctgcatcggtctgcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="100236" stop="97882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99936" g_stop="99851" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99850" i_stop="99510" i_length="341">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99509" g_stop="99459" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="137" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99458" i_stop="99368" i_length="91">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99367" g_stop="99250" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="255" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99249" i_stop="98500" i_length="750">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98499" g_stop="98182" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="573" r_length="318" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E316797" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99936" e_stop="99851"/>
          <exon e_start="99509" e_stop="99459"/>
          <exon e_start="99367" e_stop="99250"/>
          <exon e_start="98499" e_stop="98182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTTAGGGTTTTCCGGCGATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTTGTGAGTTCTTCTTCTTCTTAATTCTTCTGTTGCTTACCGGTACTGATCATCACATGCTGTTGTTTATTTATTTAAAAAAAAAATAAGAAAAAATACTGAATTTCTCCGTTTTACAATTGCTGATCAATTTTGTCATGAAAAGATAGGATCATTTTCGTTTTTCTTTTGATCCAATTTTTGGTAGTGTTGTTGTTTCCTTTACATCTTCGAATGTATCGTTTTATGTTCTTGCTTTCTTGAGGAAATAAATGTAGCTATATTTAGTGCTCTATTCAATCTGGGGTTTTCTTGTTTCTTCTTTTTTTCGTTACTAATATTTTTCGTGATTTTCTCATTTACAGTACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAGGTGATACGGAGATGAATTTCTTGATTTTCTCATTTTCATATTATTATTTTTGTTAAGTAATAGACGCTGTAATTTTTAAATGTCTATGCAGAAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCGGTATAGTTTTCTTCCCTTTTATTTCGCTTTCTTGTTTCTTGTTTCAATTGTTCAACAGTTCTTTTTTTTTTATCATCGTCTCTTCTATCCAACTTTCTAATGTTACTTTTTACTTGCTTTGGGATGTTAAGGTCTTGAAATCTCAATAGCAGAACTTGAAGTTTCTTGTTGAACGTTAATGTCCTTTTTTTGTGTCTTAAATGACTTATACTGAACATGACTCTATACTTTGCGTTTTCATGTTTTTTATTTCTAAGTGGTGGTTTCTAAGATGTCCATTTCGAAATTGGCAGATGGCAGATGTATTAAAGTAGTGTAAGTTAGTCCTCATAAATGTCCTTGGATCTCAGTTCTGCCCTATTCCGGTTTGCCTAAAGTTACAATTGTAACAATGACCTCAATTCCAAGCTAGTTTGGGCCAAATGTACTAATCCACTATCCTTTTATTTTCACAATGCCATGGTGTCATGGACAATCTCTGCTTCCCTGTTTTGCTAGGAAGCTACTTCATAAGATCTTGCTTTCTAGTCCTGATTTTTCTATTGTTCCTTTTCCCATTTTTCTTACATTAATGAATATATTTACTTTTTAAATGAGTCTTTCTGAGTGAACAACATGCCTAGCCTAAAAAGAGGAGTGGATACAAATATAGATCATCCTAACTAGTATGATATTGCAGCATAGTTAGTATATCGCTCTTGCTAATGATTACTGTACTACTTTTAACAAGTCTTTCGGTTTGGATTGCAGTTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATT</genome_strand>
        <mrna_strand>TCGTTAGGGTTTTCCGGCGATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTT.....................................................................................................................................................................................................................................................................................................................................................TACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAG...........................................................................................AAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGACCCTCCTATACTTTTGTCTCTGCATCGGTCTGCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E352316" ref_strand="+" ref_description="SGN-E352316 [cTOS-9-O15]">
      <seq>caaaatcaaatgcttatcatggatcagatccagcaattgtgctcttatttgaaccatcattgctcaactttgtagcagagtacaaaattatatgtgcttttccatcgacagattttgacaaggcaactgaatttgatatatattactcaagagagggttgttggaaaattgctgaggagatgtgctttggaagtagaacaatatttccaaaatcagggatccatgtgaatggcgttgtttactggatgacaagtaagaatattcttgcttttgatctaacaaagggtaggacacagctccttgaaagctatggcactcgtgggttcttggggacttttagtggaaagctctgtaaggttgatgtcagtggtgatataatcagcttaaacgttttggctaatacccactcaaatacaatgcaaataggtagccaaatcaaaatgtggtcagagaaagagattgttgttcttgacagtgaaattgttggggatggtgcagcaagggaccacacagttttacatgttgacagtgatataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="105434" stop="104298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105134" g_stop="104598" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="537" r_length="537" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E352316" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105134" e_stop="104598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCAAATGCTTATCATGGATCAGATCCAGCAATTGTGCTCTTATTTGAACCATCATTGCTCAACTTTGTAGCAGAGTACAAAATTATATGTGCTTTTCCATCGACAGATTTTGACAAGGCAACTGAATTTGATATATATTACTCAAGAGAGGGTTGTTGGAAAATTGCTGAGGAGATGTGCTTTGGAAGTAGAACAATATTTCCAAAATCAGGGATCCATGTGAATGGCGTTGTTTACTGGATGACAAGTAAGAATATTCTTGCTTTTGATCTAACAAAGGGTAGGACACAGCTCCTTGAAAGCTATGGCACTCGTGGGTTCTTGGGGACTTTTAGTGGAAAGCTCTGTAAGGTTGATGTCAGTGGTGATATAATCAGCTTAAACGTTTTGGCTAATACCCACTCAAATACAATGCAAATAGGTAGCCAAATCAAAATGTGGTCAGAGAAAGAGATTGTTGTTCTTGACAGTGAAATTGTTGGGGATGGTGCAGCAAGGAACCACACAGTTTTACATGTTGACAGTGATATAA</genome_strand>
        <mrna_strand>CAAAATCAAATGCTTATCATGGATCAGATCCAGCAATTGTGCTCTTATTTGAACCATCATTGCTCAACTTTGTAGCAGAGTACAAAATTATATGTGCTTTTCCATCGACAGATTTTGACAAGGCAACTGAATTTGATATATATTACTCAAGAGAGGGTTGTTGGAAAATTGCTGAGGAGATGTGCTTTGGAAGTAGAACAATATTTCCAAAATCAGGGATCCATGTGAATGGCGTTGTTTACTGGATGACAAGTAAGAATATTCTTGCTTTTGATCTAACAAAGGGTAGGACACAGCTCCTTGAAAGCTATGGCACTCGTGGGTTCTTGGGGACTTTTAGTGGAAAGCTCTGTAAGGTTGATGTCAGTGGTGATATAATCAGCTTAAACGTTTTGGCTAATACCCACTCAAATACAATGCAAATAGGTAGCCAAATCAAAATGTGGTCAGAGAAAGAGATTGTTGTTCTTGACAGTGAAATTGTTGGGGATGGTGCAGCAAGGGACCACACAGTTTTACATGTTGACAGTGATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E446983" ref_strand="+" ref_description="SGN-E446983 [cSTA-23-N10]">
      <seq>ctcacattggtgaagtaatcatcaataaatgcttttgcactagaaggaatccaattagcatctctgctgctgctatatatttggcatgtcaactagaggacaagcggaagacccaggctgaaatatgtaaggtgactggactaactgaggttactcttcgtaaggtgtacaaggagcttttggagaactgggatgatctcctaccctcaagttataaaccagttgttccaccagagaaggcttttccttcagctaccattgctacaggccgttcattaacacctagagttgatttagttgagggaacttcatctgagagggacaagcctgttaaaccagtcaactcattagatgtatctcctcagatcagaggcaaggaggactctcatagcaaagataatattaatacgactcaattatcttggccaccaccattttggaagcctgaagctcctactgaaggtggtgttaaaacagctacagagaagagtcagaatgctactcaagaaatggaaattgatttataatataaatctcagtaagatgcaccttttcacaaatagcaaaaactgcttctagttctttgatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="109368" stop="108188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109068" g_stop="108531" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E446983" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109068" e_stop="108531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAGGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACCAGTTGTTCCACCAGAGAAGGCTTTTCCTTCAGCTACCATTGCTACAGGCCGTTCATCAACACCGAGAGTTGATATAGTTGAGGGAACTTCATCTGAGAGGGACAAGCCAGTTAAACCAGTCGACTCATTAGATATATCTCCTCAGATCAGAGGCAAGGAGGACTCCGACAGCAAAGATAATATTAATACAACTCAATTATCTTGGCCACCACCATTTTGGAAGCCTCAAGCTCCTGCTGAAGGTGGTGTTAAATCAGCTACAGATAAGAGTCAGAATGCTACTGAAGAAATGGAGATTGATTTATAATATAAATCTCA</genome_strand>
        <mrna_strand>CTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAGGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCCTCAAGTTATAAACCAGTTGTTCCACCAGAGAAGGCTTTTCCTTCAGCTACCATTGCTACAGGCCGTTCATTAACACCTAGAGTTGATTTAGTTGAGGGAACTTCATCTGAGAGGGACAAGCCTGTTAAACCAGTCAACTCATTAGATGTATCTCCTCAGATCAGAGGCAAGGAGGACTCTCATAGCAAAGATAATATTAATACGACTCAATTATCTTGGCCACCACCATTTTGGAAGCCTGAAGCTCCTACTGAAGGTGGTGTTAAAACAGCTACAGAGAAGAGTCAGAATGCTACTCAAGAAATGGAAATTGATTTATAATATAAATCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E276510" ref_strand="+" ref_description="SGN-E276510 [cLEN-17-I3]">
      <seq>atgcttattttttgcaactgtgtggaaatatcagttgcggccaatttacctcagaaggaaatcgggaagtacataaagattcttggagaagcgttacaactcagtcaacctatcaatagtaattctatatcagtccatatgccaaggttttgtacactccttcagctgaataaatctgctcaggagctggcgactcacattggtgaagtaatcatcaataaatgcttttgcactagaaggaatccaattagcatctctgctgctgctatatatttggcatgtcaactagaggacaagcggaagacccaggctgaaatatgtaaggtgactggactaactgaagttactcttcgtaaggtgtacaaggagcttttggagaactgggatgatctcctaccatcaagttataaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="109900" stop="108549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109600" g_stop="109577" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109576" i_stop="109491" i_length="86">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109490" g_stop="109332" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="183" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109331" i_stop="109079" i_length="253">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="109078" g_stop="108849" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="413" r_length="230" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E276510" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109600" e_stop="109577"/>
          <exon e_start="109490" e_stop="109332"/>
          <exon e_start="109078" e_stop="108849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTTATTTTTTGCAACTGAGTGGTAGTCTGAGATGCATTTCATAAAAAAACTTCCATGAACTTTCTGATTTTTCTGTGCTTTTCTAATTTGGATTAATTGATAACTAGGAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGCTCAGGTACCTAACTGGTTCATTCAGAAGTTAGTAATCAGTTAACTTAGATAATTGTATATACTATTGCCATTAACAAAAAATCAATAGCCGATAAAAACTCTATTTCCCAATCAATTTGTTTGAGACTGCGAATAAGTCATGTCATGTTGGTCCTATGTTTTTACTCAATTTCATCAAGAAGTTATTGTTTAGTTTACTTACGTTCCTCTGTATTTACTAAATCTTTTGACTGTATGTTGCACAACCATTGCATCAGGAGCTGGCGACTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAGGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACC</genome_strand>
        <mrna_strand>ATGCTTATTTTTTGCAACTGTGTG......................................................................................GAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGCTCAG.............................................................................................................................................................................................................................................................GAGCTGGCGACTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAAGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E486588" ref_strand="+" ref_description="SGN-E486588 [cSTE-22-J21]">
      <seq>cagaactccaagcccccacgcctagctagttgaaatcagaaaaaatgcggtgtccgtactgctcggcggagcaagggcggtgtaccagcagcactagtggcagaccgataacagagtgcacatcctgcggccgggtagtggaggagcgattaacccaatcccaccatctttttcatacccgtgcccaagattctcctctgtgcctggctacttccgatctccccactcttcccatctccgccactaacgacgatgaagacccatttgaacccactagtttcatcaccgctttctctacttggtctctcgaaccctacccagtatttgcccaatcctccatttcattcgccggccaccttgcagagctcgagcgggtcctcgaaacgacgtcaacttccaccagttcgtcttcttcctctgtcgtggtggaaaatctccgggcttatttgcagattattgatgtggcttctattctgcgactggattatgatatttcggaccacgcgtttcagctcttcagggattgttcttcggcgacttgcttaaggaatcggagtgttgaagcgcttgctactgctgctcttgtgcacgctatcagggaagcccaagagccgagaactctccaggaaatatcagttgcagccaatttacctcagaaggaaatcgggaagtacataaagattcttggagaagcgttacaactcagtcaacctatcaatagtaattctatatcagtacatatgccaagggttttgtacactccttcagctgaataaatctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="111961" stop="109036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111661" g_stop="111037" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="626" r_length="626" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111036" i_stop="109491" i_length="1546">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109490" g_stop="109336" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="782" r_length="156" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E486588" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111661" e_stop="111037"/>
          <exon e_start="109490" e_stop="109336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTACTGCAATTCCCCACGCCTAGCTAGTTGAAATCAG-AAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTGGTTTCATCACCACTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGTCACCTTGCAGAGCTCGAGCGGGTCCTCGAAATGACGTCAACTTCCTCCAGTTCGTCCTCTTCTTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTCTGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCAGCAACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAGGTATGTTAAATTGGTAAATGGATGCCATAAATACTATGCCAAAAATCTCAATAGCAATAACATATTAGCTAATATTTCAATTCAAAAACTCAAAATAGATAGTACATGTTAAAAGTCTAGAACTTGAATGAGAAAAAAAAAGAATATAAGTCAAAACAGAGGTAGAAGTGACTCTGAAATCTGAGGAAGAACAAGGAAAAGAACTGAGGAAGAAGAAGAAAAGAAGAAATATGTATTGATTGGACTTTGGAGTTGCCAGAGAAGTCTGGCTGGCCGTCGGAGGAGTGTAGTCGAAAACCCTAAATGTACCTTTTAGCTTTTAAAATCCTAAATTTGTCGCCTTTTTTAACGAAAATACAAAATGCGACGCCTTTCTCGCCTCTCGCCTTTGTCGTAATGGCGTCGCCTGTCGAAGATGGCCTCGCCACAAAGCTAAAAAGCAATGAAGGGTCGCCTCGCCTCTCGCCATTGGCGACGAGGCAATCGCCTTTCACAACACTGGTAATTGCAGCTATGTAACTTCGTTTTTCTCAGTGCACCAACTGATTCAGCTGAACCTTTGTGATTGTAGTTTGTTTCGTATTGCTATTTCCTTTCTTGTTCTCTTGTTCAAGCTTATTTCCATCCTAGGGTTTATTCTAATGTTGATAACCTTTTGCCTTCTCCAAACCTCTCTTTTTCACTTACTACTTTTCCTCTTTCTTATCTTAAGTGGAAGATACCCTATATGTAGAAAATCATGGAAGGGAAAAAACAAAGAACAAAGAGGGAAATAGAAGAGAAAAGACAGGAAACTTTTGGTGGGCTGTAAGGGAACTTCTTCCTCCTCACCCCCCCCCCCTCACCCAGTCCCCCACCCAATGTTCTTTTCCTGTGTTTTTCTATGAGGGAACTCTTGTACTTCTTTCCTCTTCCCTTTCCTTGTTTCCTTTATTAGTGTGCCGAACCTGGAGTTGCAGTATAGTTGCATCGATGATATGCCCTGGGATTGACCATCAACAATAAATTTGCTGCTAACTTTAAAGTGGTTTAGAGATACTACCCATTTGATTGCACTTAAACCCAAGTAAATGGTCAATAACCTTAAGCTCACAATTTGAATTTTGTTTCTTGGTCTATTTTAAACATATACTCCGTGAAATAGAACAGTGCTTCAAAATAGCAATGACAATGTGGAAAGCAACATTCATGTATTGAATGTGAAGTACTGCCATTGTGTTACTATTGTCAATTGTCATTCTTGTAGTAAGTGAGCTAGAGAGAGAGAGAGAGAGGGGTCTCAATATTGCTAACTTGTCATTTTTTATATTATGCTAGTGTGTCTTTGTCAATGGTTGTTGATTGTAATTTGTATACCATGTTTAATTTGAAATAATCAGACATTCTTCCAATTGTAGGTCAACTGAACATTTGGCTTTTTTCGCCTCTTCCACTGGATGCTTATTTTTTGCAACTGAGTGGTAGTCTGAGATGCATTTCATAAAAAAACTTCCATGAACTTTCTGATTTTTCTGTGCTTTTCTAATTTGGATTAATTGATAACTAGGAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAA-GGTTTTGTACACTCCTTCAGCTGAATAAATCTGC</genome_strand>
        <mrna_strand>CAGAACTCCAAGCCCCCACGCCTAGCTAGTTGAAATCAGAAAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACTAGTGGCAGACCGATAACAGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCCGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTAGTTTCATCACCGCTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGCCACCTTGCAGAGCTCGAGCGGGTCCTCGAAACGACGTCAACTTCCACCAGTTCGTCTTCTTCCTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTATGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCGGCGACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATCAGTTGCAGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTACATATGCCAAGGGTTTTGTACACTCCTTCAGCTGAATAAATCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E427371" ref_strand="+" ref_description="SGN-E427371 [STM-48-G18]">
      <seq>cagaactccaagcccccacgcctagctagttgaaatcagaaaaaatgcggtgtccgtactgctcggcggagcaagggcggtgtaccagcagcactagtggcagaccgataacagagtgcacatcctgcggccgggtagtggaggagcgattaacccaatcccaccatctttttcatacccgtgcccaagattctcctctgtgcctggctacttccgatctccccactcttcccatctccgccactaacgacgatgaagacccatttgaacccactagtttcatcaccgctttctctacttggtctctcgaaccctacccagtatttgcccaatcctccatttcattcgccggccaccttgcagagctcgagcgggtcctcgaaacgacgtcaacttccaccagttcgtcttcttcctctgtcgtggtggaaaatctccgggcttatttgcagattattgatgtggcttctattctgcgactggattatgatatttcggaccacgcgtttcagctcttcagggattgttcttcggcgacttgcttaaggaatcggagtgttgaagcgcttgctactgctgctcttgtgcacgctatcagggaaagcccagagccgagaactctccaggaaatatcagttgcagccaatttacctcagaaggaaatcgggaagtacataaagattcttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="111961" stop="109129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111661" g_stop="111037" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="626" r_length="626" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111036" i_stop="109491" i_length="1546">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109490" g_stop="109429" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="688" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E427371" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E427371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111661" e_stop="111037"/>
          <exon e_start="109490" e_stop="109429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTACTGCAATTCCCCACGCCTAGCTAGTTGAAATCAG-AAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTGGTTTCATCACCACTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGTCACCTTGCAGAGCTCGAGCGGGTCCTCGAAATGACGTCAACTTCCTCCAGTTCGTCCTCTTCTTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTCTGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCAGCAACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAGGTATGTTAAATTGGTAAATGGATGCCATAAATACTATGCCAAAAATCTCAATAGCAATAACATATTAGCTAATATTTCAATTCAAAAACTCAAAATAGATAGTACATGTTAAAAGTCTAGAACTTGAATGAGAAAAAAAAAGAATATAAGTCAAAACAGAGGTAGAAGTGACTCTGAAATCTGAGGAAGAACAAGGAAAAGAACTGAGGAAGAAGAAGAAAAGAAGAAATATGTATTGATTGGACTTTGGAGTTGCCAGAGAAGTCTGGCTGGCCGTCGGAGGAGTGTAGTCGAAAACCCTAAATGTACCTTTTAGCTTTTAAAATCCTAAATTTGTCGCCTTTTTTAACGAAAATACAAAATGCGACGCCTTTCTCGCCTCTCGCCTTTGTCGTAATGGCGTCGCCTGTCGAAGATGGCCTCGCCACAAAGCTAAAAAGCAATGAAGGGTCGCCTCGCCTCTCGCCATTGGCGACGAGGCAATCGCCTTTCACAACACTGGTAATTGCAGCTATGTAACTTCGTTTTTCTCAGTGCACCAACTGATTCAGCTGAACCTTTGTGATTGTAGTTTGTTTCGTATTGCTATTTCCTTTCTTGTTCTCTTGTTCAAGCTTATTTCCATCCTAGGGTTTATTCTAATGTTGATAACCTTTTGCCTTCTCCAAACCTCTCTTTTTCACTTACTACTTTTCCTCTTTCTTATCTTAAGTGGAAGATACCCTATATGTAGAAAATCATGGAAGGGAAAAAACAAAGAACAAAGAGGGAAATAGAAGAGAAAAGACAGGAAACTTTTGGTGGGCTGTAAGGGAACTTCTTCCTCCTCACCCCCCCCCCCTCACCCAGTCCCCCACCCAATGTTCTTTTCCTGTGTTTTTCTATGAGGGAACTCTTGTACTTCTTTCCTCTTCCCTTTCCTTGTTTCCTTTATTAGTGTGCCGAACCTGGAGTTGCAGTATAGTTGCATCGATGATATGCCCTGGGATTGACCATCAACAATAAATTTGCTGCTAACTTTAAAGTGGTTTAGAGATACTACCCATTTGATTGCACTTAAACCCAAGTAAATGGTCAATAACCTTAAGCTCACAATTTGAATTTTGTTTCTTGGTCTATTTTAAACATATACTCCGTGAAATAGAACAGTGCTTCAAAATAGCAATGACAATGTGGAAAGCAACATTCATGTATTGAATGTGAAGTACTGCCATTGTGTTACTATTGTCAATTGTCATTCTTGTAGTAAGTGAGCTAGAGAGAGAGAGAGAGAGGGGTCTCAATATTGCTAACTTGTCATTTTTTATATTATGCTAGTGTGTCTTTGTCAATGGTTGTTGATTGTAATTTGTATACCATGTTTAATTTGAAATAATCAGACATTCTTCCAATTGTAGGTCAACTGAACATTTGGCTTTTTTCGCCTCTTCCACTGGATGCTTATTTTTTGCAACTGAGTGGTAGTCTGAGATGCATTTCATAAAAAAACTTCCATGAACTTTCTGATTTTTCTGTGCTTTTCTAATTTGGATTAATTGATAACTAGGAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGG</genome_strand>
        <mrna_strand>CAGAACTCCAAGCCCCCACGCCTAGCTAGTTGAAATCAGAAAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACTAGTGGCAGACCGATAACAGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCCGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTAGTTTCATCACCGCTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGCCACCTTGCAGAGCTCGAGCGGGTCCTCGAAACGACGTCAACTTCCACCAGTTCGTCTTCTTCCTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTATGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCGGCGACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAAGCCCAGAGCCGAGAACTCTCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATCAGTTGCAGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E238401" ref_strand="+" ref_description="SGN-E238401 [cLED-17-H21]">
      <seq>gaaaatagattatccaggagaatcccagaatagagatgcaatcaaattcaaataaaccaaacgtacatataaaagggaaaagggaaaaggcaaaaaggaattttatttgttcaaaaaagagaaagaaggaatgagggatgacgatcttcccatatcaacgccaacagcaccttcatcgtcgttcacgacttcgaagaaggaaacttcctattttgccattttcggtagaggtcgttataagttttgggcctttgccgctatctcattgttagctttgtggtctatgttcaccggaactgttaccctccgttggtccgccggtaacctcaacgccatatccgatgacatcgacattcccctccccgaagatcttgacgttctcgaaatggaagaaagggagaagttagtgaagcatatgtgggatgtatacacaaacagccgtgggatcaaattgttaaagttttggcaggaagcatttgaggctgcctatgaggagttagccagtgacgtccctggagtcccagaggatgccctttctgagattgctaagatgtctgtacgctacattcctattgaatcaccacctcttcattcgtcgggaattcgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="112639" stop="114000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112939" g_stop="113320" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113321" i_stop="113483" i_length="163">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113484" g_stop="113699" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="598" r_length="216" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E238401" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112939" e_stop="113320"/>
          <exon e_start="113484" e_stop="113699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTCGTCCGTACATTTCCCATTTTCAAACCTTTTGTTTTTTTAATTTATGTCGTCCTATTGGAAATGCTGGGGCTAGTTTGGAATTGAGTGATTGGATTACGTACTTATTAATAAATTGATATTTTTCATTGGTTGATTTTCGGAAATTGTTATGAATTTTTGGCAGGAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCG</genome_strand>
        <mrna_strand>GAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTC...................................................................................................................................................................GAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367932" ref_strand="+" ref_description="SGN-E367932 [TUS-22-D9]">
      <seq>gaaaatagattatccaggagaatcccagaatagagatgcaatcaaattcaaataaaccaaacgtacatataaaagggaaaagggaaaaggcaaaaaggaattttatttgttcaaaaaagagaaagaaggaatgagggatgacgatcttcccatatcaacgccaacagcaccttcatcgtcgttcacgacttcgaagaaggaaacttcctattttgccattttcggtagaggtcgttataagttttgggcctttgccgctatctcattgttagctttgtggtctatgttcaccggaactgttaccctccgttggtccgccggtaacctcaacgccatatccgatgacatcgacattcccctccccgaagatcttgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="112639" stop="113615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112939" g_stop="113315" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E367932" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112939" e_stop="113315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACG</genome_strand>
        <mrna_strand>GAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E619944" ref_strand="+" ref_description="SGN-E619944 [70639]">
      <seq>cgttaattgagatgaaggatgatgatcttcccatatcaacgccgacggcaccttcatcgtcgttcacgacttccaaaaaggaaacttcatactccgccattttcggtagaggccgttacaagttttgggcttttaccgctatcttattgttagctttctggtctatgctcaccggaactgttactctccgttggtccgccggtaacctcaacgccatatccgatgacatcgacattcccctccccgaagatctcgacgttctggaaatggaagaaagggagaagttagtgaagcatatgtgggatgtatacacaaacagccgtgggatcaaattgctaaagttttggcaggaagcatttgaggctgcctacgaggagttaaccagtgacgttcctggagtccccgaggatgccctttctgagatcgctaagatgtctgtacgctacattcctattgaatcaccacctcttcattcatcgggaatacgtgaattaagtctaaggcaaatgaagagggagcaaacaactgcaacagagagaaagttatgacttggcagaatatcaagaatcccccatttgtgtgatcaccggttttcacatacatgaatgatgattatgccatctgctgtctggttattgcgaaaggcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="112767" stop="117634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113058" g_stop="113320" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.894"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113321" i_stop="113483" i_length="163">
            <donor d_prob="0.975" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113484" g_stop="113699" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="479" r_length="216" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113700" i_stop="117173" i_length="3474">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="117174" g_stop="117340" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="648" r_length="169" r_score="0.862"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E619944" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E619944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113058" e_stop="113320"/>
          <exon e_start="113484" e_stop="113699"/>
          <exon e_start="117174" e_stop="117340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTCGTCCGTACATTTCCCATTTTCAAACCTTTTGTTTTTTTAATTTATGTCGTCCTATTGGAAATGCTGGGGCTAGTTTGGAATTGAGTGATTGGATTACGTACTTATTAATAAATTGATATTTTTCATTGGTTGATTTTCGGAAATTGTTATGAATTTTTGGCAGGAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCGGTTAGCTCTCTCTTTCATTTTTGAATCCAATTCTCATGGCGATTTGGGTGTTTTTTAGACAAGCAATAAGCCTCGTAGCGCTCTTGTGATCTTTACCACTGTTAATTGATTGTTACAATGTGAATTGTCATTTTAACGGTGTGCTGATAGAAGCTTTAACAACAATAGCAACCATACTTCAAAGTCTCTGTTTGATTGGGGTTTACTATATAGATTTTTCATTTTTCGTTTTGACTCGATTTGTTCATGTTTCATTTCAATACTCTTATGATTTCTTTGTAAGACAAATTTGCAGCTCTCTAACCCTATTGTATTTATCTTACTTTTATACAAATCTCTAAATGTATATAGAAGATGTCCAGCATACTCCAGACTGTAAGTGTATCAACATTACCAAGTCTTAATCTCGACTAGTTGGCATTGCTCAAATGATCTTTTGCTTTCATTGTGTTTTGCTCTTCACCAAGTCTAGCTAACTTTCTTCCATGTGATTTTAGGATTACCTCATTTCCTTTAAAATAACTTCAATCATTATTTGGTAATGCTGACAGATCAGTGCACTTAAAGATCTACCTAAACTCTTTTATGAATCTTTTCTTTCAAGTGTCCTATTTTAATTCTTAGACTTACTTTTTCATGTATTGCACCATTCTCTTAGATTACTAGGCTAGATCTCTGAATTGTGTGCATTTAGACATCACACCTGTTGAATCTCAACTTCATTTGTGCTGGCAGAGTTTATGTAAAAAAAAATAACTAGAATTTGCTTGTATGTTCCCCTTGTCATCTTTAGTTTCGTTATTTTGGCGATACTATATACTTAGAATGTTGCAAATGCTTCACTTGTCTATCATCACTCATAACAATGAATTTTAAGTAGTTTTTCCTTGAACTTTAAGGTATATGGTAAGTCCAAGTCAAAGGAAACTGAAAAATGCAACATAATTTGGTCTATATTCTTTGCAATGCAACTTTTAGGTAGTTGCCATTTCTTAAACTTTTCACAATCCACTAACTTAATCTGATGGTTGTGTGAGTTTATTATATTTAAGAAGATATCATAATGAACTGAAGCACATTGGGAAGTATACTTTTCTGCTCTTTGGCTCACAACTATCATAATGTCGACTTGGTCAGAAATAATACACTGAGTAGACTGTTCTATTTGGTACTTCTTAGAAAAAACATAATTTGTTTCAGATTAGGTAAGGTAGTATTTGACCTCTACACATTAAATATGAATTTAATACTGAAGTTAGCCATTTTGACTAAAGCATCTCCCTGATTTATTTAATTCTAATCTCCTTGGATGCTAAATCAAATTTACCCAATAAACTGGTATCTGCTGCAATTTCGTAAGTTGACTTTCCTGAGACAGTCGCTATTTCATATATATATATATATATACATGTACACGTAGAGATAGGGGTGGGCATTCGGTATTTCGGTTCGGTTCGGGTTTTTTTTCGGTTTTTAGTTTTTGTAAATTGCGTACCGAATACCGAACCGAAATATTTCGGTTCGGTTCGGTTTTTTAATGGGCCTGTTTAGTGGGCTTTTTAAAATTTTAAACTTAACAATTTTTTCAATTTTTTGTTTGATTTTTCAACTTAATGGACTTTGATATTTCAACTTAGGGTTTCTTATTTTTTTTAAAAAGATTATTTAATATTAATAATTATTAAATATAATATAATTTATAAATTATAATATAATATTTCGGTTTAAACCGAAATACCGAATTCCAAAGTAACATGTACCGAAAACCGAATCGAAATATCAAAAATACAAAAAATTAAACCGAATACCGAACCGAAAACCGAAATACCGAAACCGAAATTCTGAAAAATTTCGATTCGGTTCGGTGTTTTGATTTTCCGGTTTTTATGCCCACCCCTACGTAGAGAGAGAAGTTCCAACTATCCCTAACTGACGCTGGTAGGGAAATTTGGAAATTCTCTCCCACGTCACGCTAGATTATGATTATGGGCTAAAATTCAACAGCTGATGTCACCAGCCCATAATGGAAGATTTTTCACTATTAGTATTGTTATATTATTATTTCTAGTTTTTAAACTTGCACTACTCTTTTTCTTGTTCATTGTTTGCTTCTGGGAAATGCTTTTCTTTTTGTAATGGTGGTGTCCGAGCAAGCTTATGTGTGTCTTGACTTTTCCACAGGGTACCTGCTACCTCCCACCAACATAGGTACCAGGTTGGCTTAGGCAAATGGGAAGCTGGGATTCATACATGATACCTCATTTTCTAATCCCACTTCGCTGACCATTAGGCAATACCCTTGAGTTCCACTTTGGTGCAATGTTAATGCTTACATTCTATTTGCTTCTTAATTTGAGATTTCATTGATTACATTTTATCATTAATGTGGCGATATTCTACAGCCGCAAGTTTACTAGTTTTATGTTCTGTGTTCCTTATGGTTGCTTCCTTCGACTATTTGAAACCATCTAATTGTGGTTTGTTGTGTGGACCCATTCATAGGGAGAAGTGTTCTCAGTAACTAGATTCATGAGTTGTATTTTTAGATAACTTTGATATGAAAACTTATTTTTCTTTCTTCCTTGGCTAGAATTTACCTGCATGTTGACTGTACTTGGCTATTTTGCTATGTTGAACTTTAGCGATTTGCATATGGAAAAGTTTAAAAAAACAGTCCTCCCGTTCCATCTTGCTTATTGAATCACATGATAGTGTAAATCATCTGTTGTTAACTTGTTATTTTCGATAATATTGGTGATAGGTCTACCATTTCTGTCTTTCACTTTTACCATCAACATGAGATGATCTTCTATAATTCGTTTGCTCCAGTCGAAAATTTCTCCTTGTTTACATTGACAAAATACAACTTCCTCGTTGGAGCTGATTGGACCTGATAATAACACAGTTCTCTTTTCGACTTTGATGTGCGTATTCTTGTGTTATTTCTTTGTTTTCTCTGATGAAGCTTATGAAATTTCTTGTTGCTCCATATAAGAGTTGAAGAAAGTTCTCAGTATTTATATATGTATGTAATAAAGAGTTGAAGGGAAGTTCTCTTTGCCTCTTAGAGGGCAGTTTACATGAAATATGCAGTAACTTCCTATTAAGTACACTGTGATAAAATAGTAGCTTTTCTTTCTGCAACTTAATTGGTCAAGTTGGTTGGCGTGAAACACGATAGCCTAACAATATTGTGCCCAAGGTTGGCAGGTGATGGATAATAAGATGTTCCGTTTTTCCTTTCTATAGGCCAATAACTTTGGCTGGAAAAACAACATTCTTTATGGCTGGATCTCTCTCTTTAGCCTCTAACGTGCGCTGATTGTTGCTGCTATTTTGTGTTGTCTTTTGTTAAAAGTTACAGTCAAAGATAACTTTCTTAATTCCACCCAGTTTGCTCTCCTAGATTCTTGTTATGTTGTGATTGTTCCTAATGTTAATGATGCGTTTTGATCCCATTTTAAACTATTTCAGGGAATTCGTGAATTAAGTCTAAGGCAAATGAAGAGGGAGCAAACAACTGCAACAGGGAGAAAGTTATGACTTGG-AGAATATC---AAT-CCCCATTTGTGTGGTCACCGCTTTTCACACACATGAATGATAGATTTATCCCATCTGCTGTCTGGTTATTGTGAAATAGCAT</genome_strand>
        <mrna_strand>CGTTAATTGAGATGAAGGATGATGATCTTCCCATATCAACGCCGACGGCACCTTCATCGTCGTTCACGACTTCCAAAAAGGAAACTTCATACTCCGCCATTTTCGGTAGAGGCCGTTACAAGTTTTGGGCTTTTACCGCTATCTTATTGTTAGCTTTCTGGTCTATGCTCACCGGAACTGTTACTCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTCGACGTTCTG...................................................................................................................................................................GAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGCTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTACGAGGAGTTAACCAGTGACGTTCCTGGAGTCCCCGAGGATGCCCTTTCTGAGATCGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCATCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATACGTGAATTAAGTCTAAGGCAAATGAAGAGGGAGCAAACAACTGCAACAGAGAGAAAGTTATGACTTGGCAGAATATCAAGAATCCCCCATTTGTGTGATCACCGGTTTTCACATACATGAATGAT-GA-TTATGCCATCTGCTGTCTGGTTATTGCGAAA-GGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746746" ref_strand="+" ref_description="SGN-E746746 [GI|23429648]">
      <seq>atgggaaaaagtttgaagcttcggttctccagagttattgcttctttcaattcgtgccgttcgaaaaacccttcttctcttccccaaaatcctaatttcttcccacataagctcactagtacaaaacacatttcccccgatttccctcttattgatcaaaatcaaaatcaaaatcaccgtaattacgtgccagaatccacgatgatctccgttgggtgttgtagatcagaattcaagtgggagaaagaagagaagtttcacgtggtttctagttccttcgtgtctgaagaagaagaatgtgaagaggagatcaatttggccttacgacctcctcttacacctccgcgattcagtagaattgttgttgagaagaagaagaagaaacaacagcgagttaaaaaaacgaaaacaaaaagtagaatcatccgaatgagtacttcctcagctgatgagtacagcgggatattaagcggtactaatactgattgggataataatgaagaggaaactgaatctttagtttcatcttccagaagctgttacgatttctcaagcgatgactcatctactgatttcaaccctcacttagaaaccatatgtgagaccactacaatgaggcgtcgtcacaagagaaatgccaacaccaagaggagatcaatcaagcaatccagaccaagtttttcctcttcaaaaggtagaagatcgtcggtttctacgtcatcagatagcgagctaccggcaaggttatcggtgtttaagaagctgataccgtgtagtgtggatgggaaagtgaaggagagtttcgcgatagtgaagaaatctcaggacccgtacgaagatttcaagagatcgatgatggaaatgattttagagaaggaaatgtttgagaagaatgagctggaacagcttttacaatgttttctgtcgttgaacggaaagcattatcatggagtgatagttgaggcgttctcagacatttgggagactttgtttttaggtaataatgatagagtaaggaggatgtcaattcatgatcccacacccacctactgtaggtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="126440" stop="128645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126740" g_stop="127433" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127434" i_stop="127980" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127981" g_stop="128345" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="1059" r_length="365" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E746746" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1059</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126740" e_stop="127433"/>
          <exon e_start="127981" e_stop="128345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGAAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATATGTGAGACCACTACAATGAGGCGTCGTCACAAGAGAAATGCCAACACCAAGAGGAGATCAATCAAGCAATCCAGACCAAGTTTTTCCTCTTCAAAAGGTAAAAGTACTATTTGTGCGATCAAATCTTTTATATTTACAGATAATTTTACAGTCACATTAATAAGTATTGCTTTTCGCGTGTGGAATTTGGAGAGGACAGAGTAAACATAGATCTTATAGCTATTTTGTGGAGAGATTAATTTCAAAAGACACCCAATAACAATAACATATTCAATAAAATTCCACTAACTAGAGTAGAAAAAGGATAGAGTTTACACGGAGCTTACCGTTCAAAAATTCTGGCTCAAAGCAAATGCATATCTTATTTAGAGATCAATAATTTTATTTTAAATATTTTTATCGTCTTTTTCTTTGGGAAATAGTGTATATGTAATTGTCGTACAAAAATATATGAAGCTTAATCAAAATTCATTACATTAATTAAAACGGAAAACTATTTAATTTATAATTATGTCTCAACATGCATGCTTCCTTTGTTACTTGTTTATTATTGGGTCGAATATATGAAAATATATTTTGGAAAGACTTTTGTTGCGCTAGTATTTAAAAAACTAGTACTGATTAATTATATTATGTTTGAACAGGTAGAAGATCGTCGGTTTCTACGTCATCAGATAGCGAGCTACCGGCAAGGTTATCGGTGTTTAAGAAGCTGATACCGTGTAGTGTGGATGGGAAAGTGAAGGAGAGTTTCGCGATAGTGAAGAAATCTCAGGACCCGTACTAAGATTTCAAGAGATCGATGATGGAAATGATTTTAGAGAAGGAAATGTTTGAGAAGAATGAGCTGGAACAGCTTTTACAATGTTTTCTGTCGTTGAACGGAAAGCATTATCATGGAGTGATAGTTGAGGCGTTCTCAGACATTTGGGAGACTTTGTTTTTAGGTAATAATGATAGAGTAAGGAGGATGTCAATTCATGATCCCACACCCACCTACTGTAGGTAG</genome_strand>
        <mrna_strand>ATGGGAAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATATGTGAGACCACTACAATGAGGCGTCGTCACAAGAGAAATGCCAACACCAAGAGGAGATCAATCAAGCAATCCAGACCAAGTTTTTCCTCTTCAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGATCGTCGGTTTCTACGTCATCAGATAGCGAGCTACCGGCAAGGTTATCGGTGTTTAAGAAGCTGATACCGTGTAGTGTGGATGGGAAAGTGAAGGAGAGTTTCGCGATAGTGAAGAAATCTCAGGACCCGTACGAAGATTTCAAGAGATCGATGATGGAAATGATTTTAGAGAAGGAAATGTTTGAGAAGAATGAGCTGGAACAGCTTTTACAATGTTTTCTGTCGTTGAACGGAAAGCATTATCATGGAGTGATAGTTGAGGCGTTCTCAGACATTTGGGAGACTTTGTTTTTAGGTAATAATGATAGAGTAAGGAGGATGTCAATTCATGATCCCACACCCACCTACTGTAGGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E551210" ref_strand="+" ref_description="SGN-E551210 [TUS-55-M8]">
      <seq>cagggaaaaagtttgaagcttcggttctccagagttattgcttctttcaattcgtgccgttcgaaaaacccttcttctcttccccaaaatcctaatttcttcccacataagctcactagtacaaaacacatttcccccgatttccctcttattgatcaaaatcaaaatcaaaatcaccgtaattacgtgccagaatccacgatgatctccgttgggtgttgtagatcagaattcaagtgggagaaagaagagaagtttcacgtggtttctagttccttcgtgtctgaagaagaagaatgtgaagaggagatcaatttggccttacgacctcctcttacacctccgcgattcagtagaattgttgttgagaagaagaagaagaaacaacagcgagttaaaaaaacgaaaacaaaaagtagaatcatccgaatgagtacttcctcagctgatgagtacagcgggatattaagcggtactaatactgattgggataataatgaagaggaaactgaatctttagtttcatcttccagaagctgttacgatttctcaagcgatgactcatctactgatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="126442" stop="127615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126740" g_stop="127315" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E551210" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126740" e_stop="127315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGAAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTC</genome_strand>
        <mrna_strand>CAGGGAAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262920" ref_strand="+" ref_description="SGN-E262920 [cLEG-59-D2]">
      <seq>aaaaagtttgaagcttcggttctccagagttattgcttctttcaattcgtgccgttcgaaaaacccttcttctcttccccaaaatcctaatttcttcccacataagctcactagtacaaaacacatttcccccgatttccctcttattgatcaaaatcaaaatcaaaatcaccgtaattacgtgccagaatccacgatgatctccgttgggtgttgtagatcagaattcaagtgggagaaagaagagaagtttcacgtggtttctagttccttcgtgtctgaagaagaagaatgtgaagaggagatcaatttggccttacgacctcctcttacacctccgcgattcagtagaattgttgttgagaagaagaagaagaaacaacagcgagttaaaaaaacgaaaacaaaaagtagaatcatccgaatgagtacttcctcagctgatgagtacagcgggatattaagcggtactaatactgattgggataataatgaagaggaaactgaatctttagtttcatcttccagaagctgttacgatttctcaagcgatgactcatctactgatttcaaccctcacttagaaaccatatgtgagaccactacaatgaggcgtcgtcacaagagaaatgccaacaccaagaggagatcaatcaagcaatccagaccaagtttttcctcttcaaaaggtagaagatcgtcggtttctacgtcatcagatagcgagctaccgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="126445" stop="128325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126745" g_stop="127433" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="689" r_length="689" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127434" i_stop="127980" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127981" g_stop="128025" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="734" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E262920" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126745" e_stop="127433"/>
          <exon e_start="127981" e_stop="128025"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATATGTGAGACCACTACAATGAGGCGTCGTCACAAGAGAAATGCCAACACCAAGAGGAGATCAATCAAGCAATCCAGACCAAGTTTTTCCTCTTCAAAAGGTAAAAGTACTATTTGTGCGATCAAATCTTTTATATTTACAGATAATTTTACAGTCACATTAATAAGTATTGCTTTTCGCGTGTGGAATTTGGAGAGGACAGAGTAAACATAGATCTTATAGCTATTTTGTGGAGAGATTAATTTCAAAAGACACCCAATAACAATAACATATTCAATAAAATTCCACTAACTAGAGTAGAAAAAGGATAGAGTTTACACGGAGCTTACCGTTCAAAAATTCTGGCTCAAAGCAAATGCATATCTTATTTAGAGATCAATAATTTTATTTTAAATATTTTTATCGTCTTTTTCTTTGGGAAATAGTGTATATGTAATTGTCGTACAAAAATATATGAAGCTTAATCAAAATTCATTACATTAATTAAAACGGAAAACTATTTAATTTATAATTATGTCTCAACATGCATGCTTCCTTTGTTACTTGTTTATTATTGGGTCGAATATATGAAAATATATTTTGGAAAGACTTTTGTTGCGCTAGTATTTAAAAAACTAGTACTGATTAATTATATTATGTTTGAACAGGTAGAAGATCGTCGGTTTCTACGTCATCAGATAGCGAGCTACCGG</genome_strand>
        <mrna_strand>AAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATATGTGAGACCACTACAATGAGGCGTCGTCACAAGAGAAATGCCAACACCAAGAGGAGATCAATCAAGCAATCCAGACCAAGTTTTTCCTCTTCAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGATCGTCGGTTTCTACGTCATCAGATAGCGAGCTACCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E258479" ref_strand="+" ref_description="SGN-E258479 [cLEG-47-J10]">
      <seq>aaaaagtttgaagcttcggttctccagagttattgcttctttcaattcgtgccgttcgaaaaacccttcttctcttccccaaaatcctaatttcttcccacataagctcactagtacaaaacacatttcccccgatttccctcttattgatcaaaatcaaaatcaaaatcaccgtaattacgtgccagaatccacgatgatctccgttgggtgttgtagatcagaattcaagtgggagaaagaagagaagtttcacgtggtttctagttccttcgtgtctgaagaagaagaatgtgaagaggagatcaatttggccttacgacctcctcttacacctccgcgattcagtagaattgttgttgagaagaagaagaagaaacaacagcgagttaaaaaaacgaaaacaaaaagtagaatcatccgaatgagtacttcctcagctgatgagtacagcgggatattaagcggtactaatactgattgggataataatgaagaggaaactgaatctttagtttcatcttccagaagctgttacgatttctcaagcgatgactcatctactgatttcaaccctcacttagaaaccatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="126445" stop="127637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126745" g_stop="127337" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="593" r_length="593" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E258479" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126745" e_stop="127337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATAT</genome_strand>
        <mrna_strand>AAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E261109" ref_strand="+" ref_description="SGN-E261109 [cLEG-65-K22]">
      <seq>aaaaagtttgaagcttcggttctccagagttattgcttctttcaattcgtgccgttcgaaaaacccttcttctcttccccaaaatcctaatttcttcccacataagctcactagtacaaaacacatttcccccgatttccctcttattgatcaaaatcaaaatcaaaatcaccgtaattacgtgccagaatccacgatgatctccgttgggtgttgtagatcagaattcaagtgggagaaagaagagaagtttcacgtggtttctagttccttcgtgtctgaagaagaagaatgtgaagaggagatcaatttggccttacgacctcctcttacacctccgcgattcagtagaattgttgttgagaagaagaagaagaaaccacngcgagttaaaaaaacgaaaacaaaaagtagaatcatccgaatgagtacttcctcagctgatgagtacagcgggatattaagcgggactaatactgattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="126445" stop="127528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126745" g_stop="127228" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E261109" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126745" e_stop="127228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGG</genome_strand>
        <mrna_strand>AAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACCACNGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGGACTAATACTGATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E689027" ref_strand="+" ref_description="SGN-E689027 [t3_tus_55_M08]">
      <seq>aaagtttgaagcttcggttctccagagttattgcttctttcaattcgtgccgttcgaaaaacccttcttctcttccccaaaatcctaatttcttcccacataagctcactagtacaaaacacatttcccccgatttccctcttattgatcaaaatcaaaatcaaaatcaccgtaattacgtgccagaatccacgatgatctccgttgggtgttgtagatcagaattcaagtgggagaaagaagagaagtttcacgtggtttctagttccttcgtgtctgaagaagaagaatgtgaagaggagatcaatttggccttacgacctcctcttacacctccgcgattcagtagaattgttgttgagaagaagaagaagaaacaacagcgagttaaaaaaacgaaaacaaaaagtagaatcatccgaatgagtacttcctcagctgatgagtacagcgggatattaagcggtactaatactgattgggataataatgaagaggaaactgaatctttagtttcatcttccagaagctgttacgatttctcaagcgatgactcatctactgatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="126447" stop="127615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126747" g_stop="127315" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E689027" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126747" e_stop="127315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTC</genome_strand>
        <mrna_strand>AAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E609332" ref_strand="-" ref_description="SGN-E609332 [25338]">
      <seq>ttttttttttttttttttaaaggaaaacagggatggggtatatctagctttaaaaacaacaagtacattattgttacattaagcaacgacatcaaactgataatgcctaaagttactacaagcttagctaaggtttaccagcaatttgaagaatatgattctggtaatatgatgaaaatatctaaaatcacttgtagataagggcgtcacgaccaggcccaataccaatgtagtggataggtaccccaacaagctcctctatcctttctacatactcgcgtgcagcattgggcaagtcagaatacttcctgatggaagaaatatcagtctgccatccaggcatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="23693" stop="137468"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131410" g_stop="131440" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.645"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131441" i_stop="136755" i_length="5315">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.797" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136756" g_stop="136768" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="42" r_length="12" r_score="0.769"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136769" i_stop="136860" i_length="92">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="136861" g_stop="137159" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="339" r_length="297" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E609332" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E609332" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="131410" e_stop="131440"/>
          <exon e_start="136756" e_stop="136768"/>
          <exon e_start="136861" e_stop="137159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTATAATTTTTTAAAAAAATAAAAAATATCCTTCATCCAATTATTATATTAAAAATATTGTTTCATAAACCTGTTTAATCTGTTGAGTCTTTAAAAAGTAGTTTTAAGTTAATTGGTAATTGTAAATTAATTTGGATGTAGTTAGATGTGGACCAATAAAAATAATACTATATATTTAATTTTAAGAAATTATGTATGTCATTTCATCTTCTATTAAAAGGAAGGTTAAGTTTACACTCAAGTTTATCCTTGAAGGTATTTTTGATCTAAATAAGTGGACAGAAAAGCACTTCTAGTCCAATAGTTGGATAATGGTTTTTTTTTTTTTACCTTTTCCAATAGGTCAAGGACAATTTTAACCCCTTTTTTTAAAAAAATATAACTCGTTAGGCTTTAAAAGCCTTACAAGAAAAAAAATTTAATATCAAATTTTTCACGTGTAAAAAGAAAATAAATAAGAATGACATTCTACTATTATAAAAATGTGGATAATGTAGCCGTATCAATATATTAGTTTTTGGTCTTTAAAATTCAAATTGAGGGCATTTTTTACTTTCATATACTATAGCAAACGTATTTCGACAGTAAAACATCATACATTCATCTTATCTCATATGCATCTCCTCATACCAACTTCAAAGCTATTGTTCTCTCTTCAAAAAAATAACATCAAACAAAGATAATAGACCGTTTAAAGCTTCAATTCTTAATTCTTAATTGTTATAAATTTTTTATAAGGTATTGTTTAATTTTATTTTACTTTCTTATTTCTTTGAATTTGTTGTTTCTGATCCTAATATTAATGGATCATTGCATTTAATTTTTTCACAATTGCATTTGTGTAATTTTTCTTCAATTCACTCCATAACTTTAAATTTTAGATGAAACAAAAAATAATTTTATCTCCATTTAATTTGATTTGCATGAGTTGATTGTTCTTATATGTGGAGCTCAATTTTGATATCTTTCACAAAGAAGAAGTCTAATATAAGCTCTTATAGGACGCATGTTATTGTTGTTTTCTTAGATTATTGTATTGAGATTGTTGTTTCACCTTTATGGTTAGTTGTTCCTTCAAATTATTGGAGCCTAAGTTGTTTCGATAATAAAATATAATTAAATTAAGAAACTACAAATTGCAAAGAAAAGATTTACATATGAAGCTTTTAGAATAACATTATCGATTGGATATGGCGGAAAAAGGAATCATGGATCTTACAAACAAATAACAGAAGGTCATAAAACCTCATTAGATTGTTATTTGAGGATATTCGTGCTAGAGAGTTAGTGAAATCAACATTGTTGAAAATGATTTTAGTGGTTGTTCAGCAATATTCCATTGTTATATTTGAAAGATGTAGTTTTGTTTTTTTAAACTTTTTTAAGTATTTGAAAGTTCTTTCATTTAAAAGTGAAATATGTTGTTTAAAAACTAATACAGTTATATTTAGCTATGAATATAAATTGATGTTATTTTTTACTCTTTGTGAAACTTCTTTCTCATTTTGTGGAAAATGAAACAATGGTGTTGCTATGACATTATTTAGATGCACATCATTCAATTTTATTTTTTTAAAAGTCAATTTCAAATAACAAAAATGATAAAAATATAATAGCAATAAGCTAGATTAATATAATATATAAGACTAATTTATGAATGAAATACATAACAACTAATAAGATAAATATTAAGTCCATGCACACATGACCAAAATTATCTAATTTCCTTAATAAGTGCTACCAATGTGGTAACTAACTCAGTCTATAGACCAGCTTTTCATGTCATCTCCAATTAAATTAATTATTTGTCAAATAAAAAAATTATTTATTAGAAAGCAGTTAATTAAATAGTTATGACAATTAATAGCTAAGGAGGATGTGTAGATGGTCGCGAATCATGATATTTGGAAACATACACCTCTACAAACTAAAAATTATAATATATATATATATATATATTAAATTATTTTTTTAATTTTTTATCTTAAATATATTAAGGAAAAGTTGAATTTAAAAATGACAAAAAGGAAAAACATTATTTAATGTTATCGAAACGAACTAAAACAAACTTTTTTTGACATAAAAGAAGAGCTAGCTAGCATAAGACAAAAAGATTTCTAGGGAGTACTACAGCAAGCAAATTTAAAATTTTTTTATTACATAAACTGGAAGTGACAGGATAAACTGTAAATATACTTTTTTCGTATGCAATGAAATGTAATATCTGAGATCTCTCTGTTAACTTGTATAAATATTTTAACGCGTGCCTGAGTCCCTGACCTAGGCCGGATAGAGTTTTCATCATGGATTGGTCGAACTCGATATGAAGTTTTAATCAAATTATTATTTGTTGCTGGGTAGTTAGATATCTACGTATTATTTTATGTCATAATTTGTTAAAATGAGTTTAGTTATTCTAGTATTGTTTATATCAACTTCTATTTTGCATAAACTTATATACTATAGATTAATGGGTTTCTATATTCCAAATTAAACATAATAGTAATTTTATACATGAATAATTTATCTCCCAATCAATTACTAGACATGATACACTTTCATTCCATTTTTAATTGTCATATTCGTTTTTACGAAGTCAATTTGACTAATATTTAAAGTAAAATAAGGTTAAATTAATTCGATATTTTAAATTAAAAATTTAAATATTTTAAAACTATATGAAAAGTCTTATAAATAACAATTTTCTTTTCATAAACGTTAATCAAAGTTTTATAGTAACTTTAAGAAAAAACATTAAAATAAACGGAGGGAGCATTATATATATTATATTTAGTACATGCATAACTCACCTTTCCAGAACTCAAAAATTTTATTAAGATAAAAGGAAAAAAGATTTTATCTAGAAAATTTATCGAGAATTTGTCTAGACTGAGATTTTTTCTATATAATTTTACTTTTTTAAAATATTACCCTTTTTAGATTTAATACCTTTTTACTTTAAGGGAAAAAGACTCAAATTGAACTAATTTTTTTATTAAAAAATTGATGATGTGGCGAATTATAATTGGTCATGTATCAAAAATTGTTTTGCAAAACCTCTATTATAAAACAATGGTATGAATGAGTTTTTTCTTGAATGGTAATGGCATAGATGAGCCAAACTTTTAACAATGAACCTTTTCTGAAAGTTTGTTGACATATTTAAGTCTTTTCCCTATACTAAAAAATGGAAGAAAAAAAAAATCAGTTTATGCCATTACCATTCAATTCCGAATCGATCTACTTGCCCATGCGAGCAGCAAAAGTGGTGTAGAATTTAGATTAAAAATACGTTAGCTGCATGAATATGGGATAAAGGCACCACCTTTTTCATGATTACTATAAATTCTTCGACCTTTGGGCTCTGAACAATTCAAGTTTCCTCAATTGTTGATAAATACACTGATACAAGGCATCAGAGATTTTTTTTCAAACCTTTAATCAAGAAAGTAGGCCTAAAACGGAGGGGCAACTTGTTAAATGAAGCATAACTTTTTTTATTTTACAGTTAGTGGTTTTCATATTCCATCAATTCATATTACTGCTGCTACCTACTTATACTTTACTATTGATTGTGCAAATCCAAAATCTTTGCTTTATGCATCGTGATCAGAGTTGGAGATCAATAAAGTGCAACTTCACAGTTCTCTTCTTTATACTATTCAAAACCCAAGAGGGATGTCAAGGGGGAAAAACCTTTTAAACGATTAAACAAATGTTTTCTAAGAGATTGTTTGATCTGACACAAAATTTTAAAAAATATGAAAAGACTTTGCATTATGTGAGATTGTTTAACTGAATATAAAATTTTAAGAATATGAAAAAACTTTGCAGCAAATCAAAAATGAATTTTCAAATAGACGAGTATACATTTTGTAAATTTTAGCCAAATAAATGAGATTCAACATCATTAAAATGTCGATAGCGTTACTAAATATTTGTCAAATTAAAAAATGTGTTTTTAAAGATCCGATTAAAAAGAAAAGTGCGCGAGGGAAGTATATTTTACCTTGAAAGTTGGTAAGTATTTGCCGTCTGCCGATTTCGGTTAGTACAAGAAGATTTGGGGTAATATAGCTATAATAGTTCAAAAAGAAGTTTTTTTCGTAGTTTGTATGGAGATCTCCGTATTGATTTACTATAATATATATTTTTTTTCCAAAATTGGTAAGTATTTTGGAATATATTATTTTGGGATTTTTGAAAATAATCAAGAAAGATTGGTAAAAGGCTGTAATATATTTTCTTTTAGAAAAAACATATTCAGATGTGTTCTGAATTTACCCAAAGCAACAAACTGAAAAAGGATCGAATTAAACGAGAAAAGCCATTAAGGCCCTTGGTTTTGTCAAACCATTCTTGGATACATTTGGTAACTTTGTACCTAGTAATGCTCGAATCCAAAACCTACTATCTACCGTACCAAACAAACTCTCAAGTTTTTTACATGGACGTTGGTTTGCGGACATGAAAAGCTAAAAAAGAAATCCACTAAAACCATGGAAGAAGGGCCCTTCGAGAGGAAAAGGTGACCCTCAGAACGCGTTTAACGCAAGGCCAAAATCAAAGAGCCAAAGACGTGAAGTTGGCTGTGGTTAGGATCTTTTGCTACAGCAGAAGAAGTTGCTGTCTTACCTTAATTTACCCCATATGAGAGCTAATTTCAATCCATTGAACAGATCACACAAGTTCTAATGGTTCACTTCCAGCAACAACTTTGTTTCATCAGTATTCCCTAATAGCACTGGCTGGCTAAACTTAAAAGTGCTCAAGCCTAATGTTCACCAAAGACTTCAACAACTCAAGGGAAAAGAGGAATACAAAACAAAACCAAACAAACGCCACTTAACAATTCCACATGTGGAGGAGAAAAAGGAAGTCAAATTCTCGTCATGATCAAGAGAAGCCTCAGATTGATCTTAATGGATTTCTTCAACAGATTTGAATACTGAAAAGAGATGATCAACAGCCTCATAGAGGTCATGATTGTAAATCAGTTGTTTCAGAGTGTGGAGTTTTACTGAAAGATGACAATGTTTCTTTGCTGATACAACAAGTTACAGATAAGACGCACTAGGTGCAATAACGGGTACAGAAGATCACATCACGAGGCAGCAGCAGAGGCTAGTAGATTTGTAGATGCTTACAATGTAAATGATGTGCTTATATTTCCCTCTTCACTATGGAACTTCTGAAAATACTGAACTATTTTAATAGGTCTAATACGACTAGATTTATGGTAGCTGCTTGTATGCACCATCTTACTAGAATCAAAATCATCACCAACTAGAGGGGAAACCTTTTAAACCACTCCTGGGTAATCAATCCCCTGTTCTTTAGGGGTGGGAGGATATTTGCTGATGTTAGCAGACTTGGACAAGCTAAACGGAAACCTTGATCATTGGCATTCTTAACTGACTTTTCCTTGGGAGGTCTAACAAAATTTCTAGCTTTAAAGACAACAGAGACATAATTTTTACATTAAGCAATAACATCAAAATGATAATTCATGATGTTACTACAAGCTTAGTCTAAGGTTTACCAACAATTTGAAGAATATGACTCTGGCAATATGATGATAAAAATCTAAAATCACTTGTAGATAAGGGCATCACGACCAGGTCCTATACCAATGTAATGGATAGGTACCCCAACAAGCTCCTCTATCCTTTCTACATACTCGCGTGCAGCCTTAGGCAAGTCAGAATACTTCCTGATGGAAGAAATATCACTCTTCCACCCAG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTAAAGGAA-AACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGGG-GTATA............................................................................................TCTAGCTTTAAAAACAACAAGTACATTATTGTTACATTAAGCAACGACATCAAACTGATAATGCCTAAAGTTACTACAAGCTTAG-CTAAGGTTTACCAGCAATTTGAAGAATATGATTCTGGTAATATGATGA-AAATATCTAAAATCACTTGTAGATAAGGGCGTCACGACCAGGCCCAATACCAATGTAGTGGATAGGTACCCCAACAAGCTCCTCTATCCTTTCTACATACTCGCGTGCAGCATTGGGCAAGTCAGAATACTTCCTGATGGAAGAAATATCAGTCTGCCATCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E222166" ref_strand="+" ref_description="SGN-E222166 [cLEL-16-C16](-)">
      <seq>tttcttccatcaggaagtattctgacttgcctaaggctgcacccgagtatgtagaaaggataaaggagcttgttggggtacctatccattacattggtataggacctggtcgtaatgcccttatctccaagtgattttagatttttatcatcatattgccagagtcatattcttcaaattgttggtaaaccttagactaagcttgtagtaacatcatgaattatcattttgatgttattgcttaacgtcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="137441" stop="23693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137141" g_stop="136896" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="136895" i_stop="132209" i_length="4687">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.372" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132208" g_stop="132176" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="278" r_length="32" r_score="0.697"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132175" i_stop="131746" i_length="430">
            <donor d_prob="0.909" d_score="0.00"/>
            <acceptor a_prob="0.011" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131745" g_stop="131733" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="291" r_length="13" r_score="0.846"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E222166" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137141" e_stop="136896"/>
          <exon e_start="132208" e_stop="132176"/>
          <exon e_start="131745" e_stop="131733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAGGAAAAGTCAGTTAAGAATGCCAATGATCAAGGTTTCCGTTTAGCTTGTCCAAGTCTGCTAACATCAGCAAATATCCTCCCACCCCTAAAGAACAGGGGATTGATTACCCAGGAGTGGTTTAAAAGGTTTCCCCTCTAGTTGGTGATGATTTTGATTCTAGTAAGATGGTGCATACAAGCAGCTACCATAAATCTAGTCGTATTAGACCTATTAAAATAGTTCAGTATTTTCAGAAGTTCCATAGTGAAGAGGGAAATATAAGCACATCATTTACATTGTAAGCATCTACAAATCTACTAGCCTCTGCTGCTGCCTCGTGATGTGATCTTCTGTACCCGTTATTGCACCTAGTGCGTCTTATCTGTAACTTGTTGTATCAGCAAAGAAACATTGTCATCTTTCAGTAAAACTCCACACTCTGAAACAACTGATTTACAATCATGACCTCTATGAGGCTGTTGATCATCTCTTTTCAGTATTCAAATCTGTTGAAGAAATCCATTAAGATCAATCTGAGGCTTCTCTTGATCATGACGAGAATTTGACTTCCTTTTTCTCCTCCACATGTGGAATTGTTAAGTGGCGTTTGTTTGGTTTTGTTTTGTATTCCTCTTTTCCCTTGAGTTGTTGAAGTCTTTGGTGAACATTAGGCTTGAGCACTTTTAAGTTTAGCCAGCCAGTGCTATTAGGGAATACTGATGAAACAAAGTTGTTGCTGGAAGTGAACCATTAGAACTTGTGTGATCTGTTCAATGGATTGAAATTAGCTCTCATATGGGGTAAATTAAGGTAAGACAGCAACTTCTTCTGCTGTAGCAAAAGATCCTAACCACAGCCAACTTCACGTCTTTGGCTCTTTGATTTTGGCCTTGCGTTAAACGCGTTCTGAGGGTCACCTTTTCCTCTCGAAGGGCCCTTCTTCCATGGTTTTAGTGGATTTCTTTTTTAGCTTTTCATGTCCGCAAACCAACGTCCATGTAAAAAACTTGAGAGTTTGTTTGGTACGGTAGATAGTAGGTTTTGGATTCGAGCATTACTAGGTACAAAGTTACCAAATGTATCCAAGAATGGTTTGACAAAACCAAGGGCCTTAATGGCTTTTCTCGTTTAATTCGATCCTTTTTCAGTTTGTTGCTTTGGGTAAATTCAGAACACATCTGAATATGTTTTTTCTAAAAGAAAATATATTACAGCCTTTTACCAATCTTTCTTGATTATTTTCAAAAATCCCAAAATAATATATTCCAAAATACTTACCAATTTTGGAAAAAAAATATATATTATAGTAAATCAATACGGAGATCTCCATACAAACTACGAAAAAAACTTCTTTTTGAACTATTATAGCTATATTACCCCAAATCTTCTTGTACTAACCGAAATCGGCAGACGGCAAATACTTACCAACTTTCAAGGTAAAATATACTTCCCTCGCGCACTTTTCTTTTTAATCGGATCTTTAAAAACACATTTTTTAATTTGACAAATATTTAGTAACGCTATCGACATTTTAATGATGTTGAATCTCATTTATTTGGCTAAAATTTACAAAATGTATACTCGTCTATTTGAAAATTCATTTTTGATTTGCTGCAAAGTTTTTTCATATTCTTAAAATTTTATATTCAGTTAAACAATCTCACATAATGCAAAGTCTTTTCATATTTTTTAAAATTTTGTGTCAGATCAAACAATCTCTTAGAAAACATTTGTTTAATCGTTTAAAAGGTTTTTCCCCCTTGACATCCCTCTTGGGTTTTGAATAGTATAAAGAAGAGAACTGTGAAGTTGCACTTTATTGATCTCCAACTCTGATCACGATGCATAAAGCAAAGATTTTGGATTTGCACAATCAATAGTAAAGTATAAGTAGGTAGCAGCAGTAATATGAATTGATGGAATATGAAAACCACTAACTGTAAAATAAAAAAAGTTATGCTTCATTTAACAAGTTGCCCCTCCGTTTTAGGCCTACTTTCTTGATTAAAGGTTTGAAAAAAAATCTCTGATGCCTTGTATCAGTGTATTTATCAACAATTGAGGAAACTTGAATTGTTCAGAGCCCAAAGGTCGAAGAATTTATAGTAATCATGAAAAAGGTGGTGCCTTTATCCCATATTCATGCAGCTAACGTATTTTTAATCTAAATTCTACACCACTTTTGCTGCTCGCATGGGCAAGTAGATCGATTCGGAATTGAATGGTAATGGCATAAACTGATTTTTTTTTTCTTCCATTTTTTAGTATAGGGAAAAGACTTAAATATGTCAACAAACTTTCAGAAAAGGTTCATTGTTAAAAGTTTGGCTCATCTATGCCATTACCATTCAAGAAAAAACTCATTCATACCATTGTTTTATAATAGAGGTTTTGCAAAACAATTTTTGATACATGACCAATTATAATTCGCCACATCATCAATTTTTTAATAAAAAAATTAGTTCAATTTGAGTCTTTTTCCCTTAAAGTAAAAAGGTATTAAATCTAAAAAGGGTAATATTTTAAAAAAGTAAAATTATATAGAAAAAATCTCAGTCTAGACAAATTCTCGATAAATTTTCTAGATAAAATCTTTTTTCCTTTTATCTTAATAAAATTTTTGAGTTCTGGAAAGGTGAGTTATGCATGTACTAAATATAATATATATAATGCTCCCTCCGTTTATTTTAATGTTTTTTCTTAAAGTTACTATAAAACTTTGATTAACGTTTATGAAAAGAAAATTGTTATTTATAAGACTTTTCATATAGTTTTAAAATATTTAAATTTTTAATTTAAAATATCGAATTAATTTAACCTTATTTTACTTTAAATATTAGTCAAATTGACTTCGTAAAAACGAATATGACAATTAAAAATGGAATGAAAGTGTATCATGTCTAGTAATTGATTGGGAGATAAATTATTCATGTATAAAATTACTATTATGTTTAATTTGGAATATAGAAACCCATTAATCTATAGTATATAAGTTTATGCAAAATAGAAGTTGATATAAACAATACTAGAATAACTAAACTCATTTTAACAAATTATGACATAAAATAATACGTAGATATCTAACTACCCAGCAACAAATAATAATTTGATTAAAACTTCATATCGAGTTCGACCAATCCATGATGAAAACTCTATCCGGCCTAGGTCAGGGACTCAGGCACGCGTTAAAATATTTATACAAGTTAACAGAGAGATCTCAGATATTACATTTCATTGCATACGAAAAAAGTATATTTACAGTTTATCCTGTCACTTCCAGTTTATGTAATAAAAAAATTTTAAATTTGCTTGCTGTAGTACTCCCTAGAAATCTTTTTGTCTTATGCTAGCTAGCTCTTCTTTTATGTCAAAAAAAGTTTGTTTTAGTTCGTTTCGATAACATTAAATAATGTTTTTCCTTTTTGTCATTTTTAAATTCAACTTTTCCTTAATATATTTAAGATAAAAAATTAAAAAAATAATTTAATATATATATATATATATATTATAATTTTTAGTTTGTAGAGGTGTATGTTTCCAAATATCATGATTCGCGACCATCTACACATCCTCCTTAGCTATTAATTGTCATAACTATTTAATTAACTGCTTTCTAATAAATAATTTTTTTATTTGACAAATAATTAATTTAATTGGAGATGACATGAAAAGCTGGTCTATAGACTGAGTTAGTTACCACATTGGTAGCACTTATTAAGGAAATTAGATAATTTTGGTCATGTGTGCATGGACTTAATATTTATCTTATTAGTTGTTATGTATTTCATTCATAAATTAGTCTTATATATTATATTAATCTAGCTTATTGCTATTATATTTTTATCATTTTTGTTATTTGAAATTGACTTTTAAAAAAATAAAATTGAATGATGTGCATCTAAATAATGTCATAGCAACACCATTGTTTCATTTTCCACAAAATGAGAAAGAAGTTTCACAAAGAGTAAAAAATAACATCAATTTATATTCATAGCTAAATATAACTGTATTAGTTTTTAAACAACATATTTCACTTTTAAATGAAAGAACTTTCAAATACTTAAAAAAGTTTAAAAAAACAAAACTACATCTTTCAAATATAACAATGGAATATTGCTGAACAACCACTAAAATCATTTTCAACAATGTTGATTTCACTAACTCTCTAGCACGAATATCCTCAAATAACAATCTAATGAGGTTTTATGACCTTCTGTTATTTGTTTGTAAGATCCATGATTCCTTTTTCCGCCATATCCAATCGATAATGTTATTCTAAAAGCTTCATATGTAAATCTTTTCTTTGCAATTTGTAGTTTCTTAATTTAATTATATTTTATTATCGAAACAACTTAGGCTCCAATAATTTGAAGGAACAACTAACCATAAAGGTGAAACAACAATCTCAATACAATAATCTAAGAAAACAACAATAACATGCGTCCTATAAGAGCTTATATTAGACTTCTTCTTTGTGAAAGATATCAAAATTGAGCTCCACATATAAGAACAATCAACTCATGCAAATCAAATTAAATGGAGATAAAATTATTTTTTGTTTCATCTAAAATTTAAAGTTATGGAGTGAATTGAAGAAAAATTACACAAATGCAATTGTGAAAAAATTAAATGCAATGATCCATTAATATTAGGATCAGAAACAACAAATTCAAAGAAATAAGAAAGTAAAATAAAATTAAACAATACCTTATAAAAAATTTATAACAATTAAGAATTAAGAATTGAAGCTTTAAACGGTCTATTATCTTTGTTTGATGTTATTTTTTTGAAGAGAGAACAATAGCTTTGAAGTTGGTATGAGGAGATGCATATGAGATAAGATGAATGTATGATGTTTTACTGTCGAAATACGTTTGCTATAGTATATGAAAGTAAAAAATGCCCTCAATTTGAATTTTAAAGACCAAAAACTAATATATTGATACGGCTACATTATCCACATTTTTATAATAGTAGAATGTCATTCTTATTTATTTTCTTTTTACACGTGAAAAATTTGATATTAAATTTTTTTTCTTGTAAGGCTTTTAAAGCCTAACGAGTTATATTTTTTTAAAAAAAGGGGTTAAAATTGTCCTTGACCTATTGGAAAAGGTAAAAAAAAAAA</genome_strand>
        <mrna_strand>TTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACCCGAGTATGTAGAAAGGATAAAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTAATGCCCTTATCTCCAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539416" ref_strand="-" ref_description="SGN-E539416 [TUS-59-C15]">
      <seq>acatacccttttgtgacttcatccagtccatcggctgtggaatctgcacaggtctnggcattgctcccaaagttgtnggtgatcttgttggtgtggttaaggcatataccacaagagttggttctggtccttttccaacagaaatcatgggcaaaggtggtgaccttcttcgttttgctgggcaggagtttggcacaaccactggacgtccgcgtcgttgtggttggctagacatagttgcgctgaaattctgctgtcaaataaatggatttgcttctcttaaccttacaaaactagacgtgctgtcagatctaccagaaattcaattgggtgttacttacaggcatcctgatggctcagcattacattcttttccctctgatcttcgtcttcttgagcaaataaaggtggagtatgaagttttgcctgggtggaagagtgatatttcttccatcaggaagtattctgacttgcctaaggctgcacgcgagtatgtagaaaggatagaggagcttgttggggtacctatccattacattggtataggacctggtcgtgatgcccttatctacaagtgattttagatttttatcatcatattgccagagtcatattcttcaaattgttggtaaaccttagactaagcttgtagtaacatcatgaattatcattttgatgttattgcttaatgtaaaaattatgtctctgttgtctttaaagctagaaattttgttagacctcccaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138608" stop="136536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138308" g_stop="138213" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137592" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="407" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137178" g_stop="136836" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="750" r_length="343" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E539416" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539416" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="138308" e_stop="138213"/>
          <exon e_start="137903" e_stop="137592"/>
          <exon e_start="137178" e_stop="136836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAGGTAAGTTTCTTTTATCTTTCTTTCTTCTTTCAACATCCTTTTGCATGATATTGTGGTGTTTGGAAATCCAGATTATTAGTTTCAACTTCATGGGGAAATTGAGCTGTATTAACACATTGTGTCACTGAAAAGCATAGATCATTGAAGTTTCATTTGTGAGGAGTTAACTTTTGTTTGATTTCCTTTACCCTGTTATTGAGAGATGAAAAAAACTAAGTTTTCTGATTTTTTTGGTACTTCTTTGTTCTTTCAGTCTGTCGTTTTCTCCCATGTATCTTGATTTTTTCCTATTTTTTGTTCATATCTGGAGACCTTCATTATGCATATTGAATCTTTTTCCCTCCTGTTGTGTGTCTTAATACCATTTTGTACTTTCCTGTATTTTGACTTCTATTATTTATCATCTACATCAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAGGAAA</genome_strand>
        <mrna_strand>ACATACCCTTTTGTGACTTCATCCAGTCCATCGGCT-GTGGAATCTGCACAGGTCTNGGCATTGCTCCCAAAGTTGTNGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E284434" ref_strand="-" ref_description="SGN-E284434 [cLER-16-J17]">
      <seq>cgttttgctgggcaggagtttggcacaaccactggacgtccgcgtcgttgtggttggctagacatagttgcgctgaaattctgctgtcaaataaatggatttgcttctcttaaccttacaaaactagacgtgctgtcagatctaccagaaattcaattgggtgttacttacaggcatcctgatggctcagcattacattcttttccctctgatcttcgtcttcttgagcaaataaaggtggagtatgaagttttgcctgggtggaagagtgatatttcttccatcaggaagtattctgacttgcctaaggctgcacgcgagtatgtagaaaggatagaggagcttgttggggtacctatccattacattggtataggacctggtcgtgatgcccttatctacaagtgattttagatttttatcatcatattgccagagtcatattcttcaaattgttggtaaaccttagactaagcttgtagtaacatcatgaattatcattttgatgttattgcttaatgtaaaaattatgtctctgttgtctttaaagctagaaattttgttagacctcccaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138128" stop="136537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137828" g_stop="137592" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137178" g_stop="136837" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="579" r_length="342" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E284434" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284434" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="137828" e_stop="137592"/>
          <exon e_start="137178" e_stop="136837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAGGTAAGTTTCTTTTATCTTTCTTTCTTCTTTCAACATCCTTTTGCATGATATTGTGGTGTTTGGAAATCCAGATTATTAGTTTCAACTTCATGGGGAAATTGAGCTGTATTAACACATTGTGTCACTGAAAAGCATAGATCATTGAAGTTTCATTTGTGAGGAGTTAACTTTTGTTTGATTTCCTTTACCCTGTTATTGAGAGATGAAAAAAACTAAGTTTTCTGATTTTTTTGGTACTTCTTTGTTCTTTCAGTCTGTCGTTTTCTCCCATGTATCTTGATTTTTTCCTATTTTTTGTTCATATCTGGAGACCTTCATTATGCATATTGAATCTTTTTCCCTCCTGTTGTGTGTCTTAATACCATTTTGTACTTTCCTGTATTTTGACTTCTATTATTTATCATCTACATCAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAGGAA</genome_strand>
        <mrna_strand>CGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E450579" ref_strand="-" ref_description="SGN-E450579 [cSTS-9-D2]">
      <seq>cttcatccagtccatcggctggtggaatctgcacaggtcttggcattgctcccagagttgttggtgatcttgttggtgtggttaaggcatataccacaagagttggttctggtccttttccaacagaaatcatgggcaaaggtggtgaccttcttcgttttgctgggcaggagtttggcacaactactggacgtccgcgtcgctgtggttggctagacatagttgcactgagattctgctgtcaaataaatggatttgcttctcttaacctaacaaaactagatgtgctgtcagatctaccagaaattcaattgggtgttacttacaggcatcccgatggctcagcattaaattcttttccctctgatcttcgtcttcttgagcaaataaaggtggagtatgaagttttgcctgggtggaagagtgatatttcttccatcaggaagtatactgacttgcctaaggctgcacgtgagtatgtagaaaggatagaggagcttgttggggtccctatccattacattggtataggacctggtcgcgatgctcttatctacaagtgatttagattttttcattatattgccagaatcatattcttcaaattgctggtaaaccttagactaagcttgtagtaacatcatgaattatcattttgatgtcattgcttactgtaaaaattatgtatttgttgtctttaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138592" stop="136567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138292" g_stop="138213" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137592" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="392" r_length="312" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137178" g_stop="136863" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="706" r_length="314" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E450579" ref_strand="-">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450579" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="138292" e_stop="138213"/>
          <exon e_start="137903" e_stop="137592"/>
          <exon e_start="137178" e_stop="136863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAGGTAAGTTTCTTTTATCTTTCTTTCTTCTTTCAACATCCTTTTGCATGATATTGTGGTGTTTGGAAATCCAGATTATTAGTTTCAACTTCATGGGGAAATTGAGCTGTATTAACACATTGTGTCACTGAAAAGCATAGATCATTGAAGTTTCATTTGTGAGGAGTTAACTTTTGTTTGATTTCCTTTACCCTGTTATTGAGAGATGAAAAAAACTAAGTTTTCTGATTTTTTTGGTACTTCTTTGTTCTTTCAGTCTGTCGTTTTCTCCCATGTATCTTGATTTTTTCCTATTTTTTGTTCATATCTGGAGACCTTCATTATGCATATTGAATCTTTTTCCCTCCTGTTGTGTGTCTTAATACCATTTTGTACTTTCCTGTATTTTGACTTCTATTATTTATCATCTACATCAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTA</genome_strand>
        <mrna_strand>CTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAGAGTTGTTGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACTACTGGACGTCCGCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTAACAAAACTAGATGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCCGATGGCTCAGCATTAAATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATACTGACTTGCCTAAGGCTGCACGTGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTCCCTATCCATTACATTGGTATAGGACCTGGTCGCGATGCTCTTATCTACAAGTGA-TTTAGATTTTT-TCATTATATTGCCAGAATCATATTCTTCAAATTGCTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTCATTGCTTACTGTAAAAATTATGTATTTGTTGTCTTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E217414" ref_strand="+" ref_description="SGN-E217414 [cLEL-21-J23](-)">
      <seq>gagtaatatttcttccatcaggaagtattctgacttgcctaagactgcacgcgagtatgtagaaaggatagaggagcttgttcgggtacctatccattacattggtataggtcctggtcgtgatgcccttatctacaagtgattttagatttttatcatcatattgccagagtcatattcttcaaattgttggtaaaccttagactaagcttgtagtagcatcatgaattatcattttgatgatattgcttaatgtaaaaattatgtctctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="137449" stop="136577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137149" g_stop="136877" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E217414" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137149" e_stop="136877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGT</genome_strand>
        <mrna_strand>GAGTAATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGACTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTCGGGTACCTATCCATTACATTGGTATAGGTCCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAGCATCATGAATTATCATTTTGATGATATTGCTTAATGTAAAAATTATGTCTCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E605780" ref_strand="-" ref_description="SGN-E605780 [21709]">
      <seq>ttggatatcgatttttggaacaaacccttttgtgacttcatccagtccatcggcctggtggaatctgcacaggtcttggcattgctcccagagttgttggtgatcttgttggtgtggttaaggcatataccacaagagttggttctggtccttttccaacagaaatcatgggcaaaggtggtgaccttcttcgttttgctgggcaggagtttggcacaactactggacgtccgcgtcgctgtggttggctagacatagttgcactgagattctgctgtcaaataaatggatttgcttctcttaacctaacaaaactagatgtgctgtcagatctaccagaaattcaattgggtgttacttacaggcatcccgatggctcagcattaaattcttttccctctgatcttcgtcttcttgagcaaataaaggtggagtatgaagttttgcctgggtggaagagtgatatttcttccatcaggaagtatactgacttgcctaaggctgcacgtgagtatgtagaaaggatagaggagcttgttggggtccctatccattacattggtataggacctggtcgcgatgctcttatctacaagtgatttagattttttcattatattgccagaatcatattcttcaaattgctggtaaaccttagactaagcttgtagtaacatcatgaattatcattttgatgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138626" stop="136604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138326" g_stop="138213" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137592" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="428" r_length="312" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137178" g_stop="136904" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="701" r_length="273" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E605780" ref_strand="-">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E605780" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="138326" e_stop="138213"/>
          <exon e_start="137903" e_stop="137592"/>
          <exon e_start="137178" e_stop="136904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGATATAGA-TTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGG-CTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAGGTAAGTTTCTTTTATCTTTCTTTCTTCTTTCAACATCCTTTTGCATGATATTGTGGTGTTTGGAAATCCAGATTATTAGTTTCAACTTCATGGGGAAATTGAGCTGTATTAACACATTGTGTCACTGAAAAGCATAGATCATTGAAGTTTCATTTGTGAGGAGTTAACTTTTGTTTGATTTCCTTTACCCTGTTATTGAGAGATGAAAAAAACTAAGTTTTCTGATTTTTTTGGTACTTCTTTGTTCTTTCAGTCTGTCGTTTTCTCCCATGTATCTTGATTTTTTCCTATTTTTTGTTCATATCTGGAGACCTTCATTATGCATATTGAATCTTTTTCCCTCCTGTTGTGTGTCTTAATACCATTTTGTACTTTCCTGTATTTTGACTTCTATTATTTATCATCTACATCAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTAT</genome_strand>
        <mrna_strand>TTGGATATCGATTTTTGGAACAAACCCTTTTGTGACTTCATCCAGTCCATCGGCCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAGAGTTGTTGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACTACTGGACGTCCGCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTAACAAAACTAGATGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCCGATGGCTCAGCATTAAATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATACTGACTTGCCTAAGGCTGCACGTGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTCCCTATCCATTACATTGGTATAGGACCTGGTCGCGATGCTCTTATCTACAAGTGA-TTTAGATTTTT-TCATTATATTGCCAGAATCATATTCTTCAAATTGCTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E474825" ref_strand="+" ref_description="SGN-E474825 [cSTB-38-G19]">
      <seq>cttggaattgctcccagagttgtcggtgatcttgttggtgtggttaaggcatatacgacaagagttggttctggtcctttcccaacagaactcatgggcaaaagtggtgatcttcttcgttctgctgggcaggagtttggcacaactactggacgccctcgtcgctgtggttggctagacatagttgcactgagatactgctgtcaaataaatggatttgcttctctaaacctaacaaaactagatgtgctgtcaaatctatcagaaattcagttgggtgttacttacaggcatcctgatggttcaacattaaattcttttccttctgatctaactcttctcgaacaaataaaagtggaatatgaagttatgcctggatggcagactgatatttcttccatcaggaagtattctgacttgcccaaggctgcatgcgagtatgtagaaaggatagaggagcttgttggggtacctatccactacattggtattgggcctggtcgtgacgcccttatctacaagtgattttagatactttcgtcatattaccagaatcatgttcttcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138554" stop="136664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138254" g_stop="138213" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.93"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137592" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="354" r_length="312" r_score="0.907"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413">
            <donor d_prob="1.000" d_score="0.82"/>
            <acceptor a_prob="0.993" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137178" g_stop="136964" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="568" r_length="214" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E474825" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138254" e_stop="138213"/>
          <exon e_start="137903" e_stop="137592"/>
          <exon e_start="137178" e_stop="136964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAGGTAAGTTTCTTTTATCTTTCTTTCTTCTTTCAACATCCTTTTGCATGATATTGTGGTGTTTGGAAATCCAGATTATTAGTTTCAACTTCATGGGGAAATTGAGCTGTATTAACACATTGTGTCACTGAAAAGCATAGATCATTGAAGTTTCATTTGTGAGGAGTTAACTTTTGTTTGATTTCCTTTACCCTGTTATTGAGAGATGAAAAAAACTAAGTTTTCTGATTTTTTTGGTACTTCTTTGTTCTTTCAGTCTGTCGTTTTCTCCCATGTATCTTGATTTTTTCCTATTTTTTGTTCATATCTGGAGACCTTCATTATGCATATTGAATCTTTTTCCCTCCTGTTGTGTGTCTTAATACCATTTTGTACTTTCCTGTATTTTGACTTCTATTATTTATCATCTACATCAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAA</genome_strand>
        <mrna_strand>CTTGGAATTGCTCCCAGAGTTGTCGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTCATGGGCAAAAGTGGTGATCTTCTTCGTTCTGCTGGGCAGGAGTTTGGCACAACTACTGGACGCCCTCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATACTGCTGTCAAATAAATGGATTTGCTTCTCTAAACCTAACAAAACTAGATGTGCTGTCAAATCTATCAGAAATTCAGTTGGGTGTTACTTACAGGCATCCTGATGGTTCAACATTAAATTCTTTTCCTTCTGATCTAACTCTTCTCGAACAAATAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATATGAAGTTATGCCTGGATGGCAGACTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCCAAGGCTGCATGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCACTACATTGGTATTGGGCCTGGTCGTGACGCCCTTATCTACAAGTGATTTTAGATACTT-TCGTCATATTACCAGAATCATGTTCTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E588852" ref_strand="+" ref_description="SGN-E588852 [42414]">
      <seq>ccccgggctgcattgtcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcttgaatgatgctatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatatccttttgtcacttcatccagtccatcagctggcggaatctgcacaggtcttggaattgctcccagagttgtcggtgatcttgttggtgtggttaaggcatatacgacaagagttggttctggtcctttcccaacagaactcatgggcaaaggtggtgatgttcttcgttctgctgggcaggagtttggcacaactactggacgccctcgtcgctgtggttggctagacatagttgcactgagatactgctgtcaaataaatggatttgcttctctaaacctgacaaaactagatgtgctgtcagatctatcagaaattcagttgggtgttacttacaggcatcctgatggttcaacattaaattcttttccttctgatctaactcttctcgaacaaataaaagtggaatatgaagttatgcctggatggaagactgatatttcttccatcaggaagtattctgacttgcccaaggctgcatgcgagtatgtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138905" stop="136788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138588" g_stop="138213" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="396" r_length="376" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137592" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="708" r_length="312" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413">
            <donor d_prob="1.000" d_score="0.82"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137178" g_stop="137088" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="799" r_length="91" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E588852" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E588852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138588" e_stop="138213"/>
          <exon e_start="137903" e_stop="137592"/>
          <exon e_start="137178" e_stop="137088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAGGTAAGTTTCTTTTATCTTTCTTTCTTCTTTCAACATCCTTTTGCATGATATTGTGGTGTTTGGAAATCCAGATTATTAGTTTCAACTTCATGGGGAAATTGAGCTGTATTAACACATTGTGTCACTGAAAAGCATAGATCATTGAAGTTTCATTTGTGAGGAGTTAACTTTTGTTTGATTTCCTTTACCCTGTTATTGAGAGATGAAAAAAACTAAGTTTTCTGATTTTTTTGGTACTTCTTTGTTCTTTCAGTCTGTCGTTTTCTCCCATGTATCTTGATTTTTTCCTATTTTTTGTTCATATCTGGAGACCTTCATTATGCATATTGAATCTTTTTCCCTCCTGTTGTGTGTCTTAATACCATTTTGTACTTTCCTGTATTTTGACTTCTATTATTTATCATCTACATCAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAG</genome_strand>
        <mrna_strand>CAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCTTGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATATCCTTTTGTCACTTCATCCAGTCCATCAGCTGGCGGAATCTGCACAGGTCTTGGAATTGCTCCCAGAGTTGTCGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTCATGGGCAAAGGTGGTGATGTTCTTCGTTCTGCTGGGCAGGAGTTTGGCACAACTACTGGACGCCCTCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATACTGCTGTCAAATAAATGGATTTGCTTCTCTAAACCTGACAAAACTAGATGTGCTGTCAGATCTATCAGAAATTCAGTTGGGTGTTACTTACAGGCATCCTGATGGTTCAACATTAAATTCTTTTCCTTCTGATCTAACTCTTCTCGAACAAATAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATATGAAGTTATGCCTGGATGGAAGACTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCCAAGGCTGCATGCGAGTATGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E407174" ref_strand="+" ref_description="SGN-E407174 [PPI-6-C8]">
      <seq>ggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcatgaatgatgcgatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatatccttttgtcacttcatccagtccatcagctggtggaatctgcacaggtcttggaattgctcccagagttgtcggtgatcttgttggtgtggttaaggcatatacgacaagagttggttctggtcctttcccaacagaactcatgggcaaaagtggtgatcttcttcgttctgctgggcaggagtttggcacaactactggacgccctcgtcgctgtggttggctagacatagttgcactgagatactgctgtcaaataaatggatttgcttctctaaacctaacaaaactagatgtgctgtcaaatctatcagaaattcagttggggtgttacttacaggcatcctgatggttcaacattaaattcttttccttctgatctaactcttctcgaacaataaaagtggaatatgaagttatgcctggatggcagactgatatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138850" stop="137314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138550" g_stop="138213" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137592" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="651" r_length="313" r_score="0.897"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E407174" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138550" e_stop="138213"/>
          <exon e_start="137903" e_stop="137592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATT-GGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG</genome_strand>
        <mrna_strand>GGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCATGAATGATGCGATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATATCCTTTTGTCACTTCATCCAGTCCATCAGCTGGTGGAATCTGCACAGGTCTTGGAATTGCTCCCAGAGTTGTCGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTCATGGGCAAAAGTGGTGATCTTCTTCGTTCTGCTGGGCAGGAGTTTGGCACAACTACTGGACGCCCTCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATACTGCTGTCAAATAAATGGATTTGCTTCTCTAAACCTAACAAAACTAGATGTGCTGTCAAATCTATCAGAAATTCAGTTGGGGTGTTACTTACAGGCATCCTGATGGTTCAACATTAAATTCTTTTCCTTCTGATCTAACTCTTCTCGAACAATAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E478765" ref_strand="+" ref_description="SGN-E478765 [cSTD-6-N16]">
      <seq>caaggaaggattttggtatccgatcgtgctcagttgttatttgattttcaccaagaagtagatgggcttagagaagctgagctagataagtcctttattggaaccaccaagagaggcattgggccttgctattcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcatgaatgatgcgatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatatccttttgtcacttcatccagtccatcagctggtggaatctgcacaggtcttggaattgctcccagagttgtcggtgatcttgttggtgtggttaaggcatatacgacaagagttggttctggtcctttcccaacagaactcatgggcaaaagtggtgatcttcttcgttctgctgggcaggagtttggcacaactactggacgccctcgtcgctgtggttggctagacatagttgcactgagatactgctgtcaaataaatggatttgcttctctaaacctaacaaactagatgtgctgtcaaatctatcagaaattcagttgggtgttacttacaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139025" stop="137354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138725" g_stop="138213" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137654" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="762" r_length="249" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E478765" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138725" e_stop="138213"/>
          <exon e_start="137903" e_stop="137654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGC</genome_strand>
        <mrna_strand>CAAGGAAGGATTTTGGTATCCGATCGTGCTCAGTTGTTATTTGATTTTCACCAAGAAGTAGATGGGCTTAGAGAAGCTGAGCTAGATAAGTCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCTTGCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCATGAATGATGCGATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATATCCTTTTGTCACTTCATCCAGTCCATCAGCTGGTGGAATCTGCACAGGTCTTGGAATTGCTCCCAGAGTTGTCGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTCATGGGCAAAAGTGGTGATCTTCTTCGTTCTGCTGGGCAGGAGTTTGGCACAACTACTGGACGCCCTCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATACTGCTGTCAAATAAATGGATTTGCTTCTCTAAACCTAAC-AAACTAGATGTGCTGTCAAATCTATCAGAAATTCAGTTGGGTGTTACTTACAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E480880" ref_strand="+" ref_description="SGN-E480880 [cSTD-15-L15]">
      <seq>cgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcatgaatgatgctatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatatccttttgtcacttcatccagtccatcagctggtggaatctgcacaggtcttggaattgctcccagagttatcggtgatcttgttggtgtggttaaggcatatacgacaagagttggttctggtcctttcccaacagaactgatgggcaaaggtggtgatgttcttcgttctgctgggcaggagtttggcacaactactggacgccctcgtcgctgtggttggctagacatagttgcactgagatactgctgtcaaataaatggatttgcttctctaaacctgacaaaactagatgtgctgtcagatctatcagaaattcagttgggtgttacttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="138877" stop="137358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138578" g_stop="138213" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="366" r_length="366" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137658" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="612" r_length="246" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E480880" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E480880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138578" e_stop="138213"/>
          <exon e_start="137903" e_stop="137658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTAC</genome_strand>
        <mrna_strand>CGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATATCCTTTTGTCACTTCATCCAGTCCATCAGCTGGTGGAATCTGCACAGGTCTTGGAATTGCTCCCAGAGTTATCGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTGATGGGCAAAGGTGGTGATGTTCTTCGTTCTGCTGGGCAGGAGTTTGGCACAACTACTGGACGCCCTCGTCGCTGTGGTTGGCTAGACATAGTTGCACTGAGATACTGCTGTCAAATAAATGGATTTGCTTCTCTAAACCTGACAAAACTAGATGTGCTGTCAGATCTATCAGAAATTCAGTTGGGTGTTACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E255028" ref_strand="+" ref_description="SGN-E255028 [cLEG-31-G21]">
      <seq>tttggtatcagatcgtgctcacttgttattggattttcaccaagaagtagatgggcttatagaagctgagctagataagtcctttattggtaccaccaagagaggcattgggccttcctattcaagcaaggttattcgaaatggcataagggttagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtattgccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagatactgtgcacttcatgaatgatgctatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatacccttttgtcacttcatccagtccatcagctggtggaatctgcacaggtcttggaattgctcccagagttgtcggtgatcttgttggtgtggttaaggcatatacgacaagagttggttctggtcctttcccaacagaactcatgggcgaatatggcgatcttcttcgttctgctgggcaggagtttggtacaactactggacgcccgcgtcgctgtggttggctagacatagttgcactaagatactgctgtcaaataaatggatttgcttctctaaacctgacaaaactagatgtgctgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139013" stop="137391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138714" g_stop="138213" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137691" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="715" r_length="213" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E255028" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138714" e_stop="138213"/>
          <exon e_start="137903" e_stop="137691"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCA</genome_strand>
        <mrna_strand>TTTGGTATCAGATCGTGCTCACTTGTTATTGGATTTTCACCAAGAAGTAGATGGGCTTATAGAAGCTGAGCTAGATAAGTCCTTTATTGGTACCACCAAGAGAGGCATTGGGCCTTCCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTTAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATTGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACTGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATACCCTTTTGTCACTTCATCCAGTCCATCAGCTGGTGGAATCTGCACAGGTCTTGGAATTGCTCCCAGAGTTGTCGGTGATCTTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAAGGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTCATGGGCGAATATGGCGATCTTCTTCGTTCTGCTGGGCAGGAGTTTGGTACAACTACTGGACGCCCGCGTCGCTGTGGTTGGCTAGACATAGTTGCACTAAGATACTGCTGTCAAATAAATGGATTTGCTTCTCTAAACCTGACAAAACTAGATGTGCTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E478814" ref_strand="+" ref_description="SGN-E478814 [cSTD-7-M15]">
      <seq>caaggaaggattttggtatccgatcgtgctcagttgttatttgattttcaccaagaagtagatgggcttagagaagctgagctagataagtcctttattggaaccaccaagagaggcattgggccttgctattcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcatgaatgatgcgatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatatccttttgtcacttcatccagtccatcagctggtggaatctgcacaggtcttggaattgctcccagagttgtcggtgatcgtgttggtgtggttaacgcatatacgacaagagttggttctggtcctttcccaacagaactcatgggcaaaaagtggtgatcttctttggttctgctgggcaagagtttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139025" stop="137544"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138725" g_stop="138213" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137903" g_stop="137805" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="614" r_length="101" r_score="0.869"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E478814" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138725" e_stop="138213"/>
          <exon e_start="137903" e_stop="137805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTGGTAAGCAAACTTGATTTATTTTCTTAAGGGAGCTTTTCCCTTGCACTGAAGAATGAAGAATTCTCATGACGTTCAATTTTATCTGATAGTCTAGCTAATATTATGGGAATAAAGCTAGTATTATCTTTCCAAAAACATATTGCAGTACATATATCATCGTCAATCGGTTTAACATGAAATGTACCCAGCTCTTTGCGAAAGAATATGATCTTCATATCAACTAGCTCTTTGGAACCGATTCACAGCATGGTCTTTCATTTTGCATTTAGTGTAGAGCAGTAAACATTTTTAACTGATGTTTCCCTGCAGGTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGC-AAAGGTGGTGACCTTC-TTCGTTTTGCTGGGCAGGAGTTTGGC</genome_strand>
        <mrna_strand>CAAGGAAGGATTTTGGTATCCGATCGTGCTCAGTTGTTATTTGATTTTCACCAAGAAGTAGATGGGCTTAGAGAAGCTGAGCTAGATAAGTCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCTTGCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCATGAATGATGCGATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATATCCTTTTGTCACTTCATCCAGTCCATCAGCTGGTGGAATCTGCACAGGTCTTGGAATTGCTCCCAGAGTTGTCGGTGATCGTGTTGGTGTG.....................................................................................................................................................................................................................................................................................................................GTTAACGCATATACGACAAGAGTTGGTTCTGGTCCTTTCCCAACAGAACTCATGGGCAAAAAGTGGTGATCTTCTTTGGTTCTGCTGGGCAAGAGTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E483811" ref_strand="+" ref_description="SGN-E483811 [cSTE-11-C11]">
      <seq>agctcgttgatatactggcaaagcatttcgacattgttgctcgttgtcagggtggagccaatgctgggcacactatttacaattctgaggggaagaagtttgctctgcaccttgtcccttctgggattctcaacgaggaaactctatgtgttattggtaatggagttgtggtgcatctaccgggactttttaaagaaattgatggtcttgaagctaatggagtctcttgccaaggaaggatcttggtatctgatcgtgcacacttgttatttgattttcaccaagaaatagatgggcttagagaagctgagctagctaaatcctttattggaaccaccaagagaggcattgggccatgctattcaagcaaggttattagaaatggtttaagagtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgccgcaagattcccaggctttaagtatggtcctgacatgctcagggaagaagtggaacgctataagaaatttgctgagaggttggaaccctttgttgcagatactgtgcacttcatgaatgatgctatatctcagaaaaagaagattttggtggaaggtggtcaggcaacaatgctggatattgattttggaacatacccttttgtgacttcatccagtccatcggctggtggaatctgcacaggtcttggcattgctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139256" stop="137941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138956" g_stop="138241" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E483811" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138956" e_stop="138241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCC</genome_strand>
        <mrna_strand>AGCTCGTT-GATATACTGGCAAAGCATTTCGACATTGTTGCTCGTTGTCAGGGTGGAGCCAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTATGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTCTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGTTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCCGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCCTTTGTTGCAGATACTGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGCTGGATATTGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E602820" ref_strand="+" ref_description="SGN-E602820 [55894]">
      <seq>caggtatcaggcgtgctgggttgtcaatggggtaatgaaggaaaaggaaagctcgttgatatattggctaagcaatttgatattgttgctcgttgtcagggaggagccaatgctgggcacactatttacaattctgaggggaagaagtttgctctgcaccttgtcccttcagggattctcaatgaggaaactatatgtgttattggtaacggagtcgtggtacatctaccaggactttttaatgaaattgacaatcttgaatctaatggagtttcttgccagggaaggattttggtatccgatcgtgctcagttgttatttgattttcaccaagaagtagatgggcttagagaagctgagctagataagtcctttattggaaccaccaagagaggcatagggccttgctattcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcatgaatgatgctatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatgctggatatcgattttgggacatatccttttgtcacttcatccagtccatcagctggtggaatctgcacaggtcttggaattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139784" stop="137945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139484" g_stop="139386" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138244" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="761" r_length="662" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E602820" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139484" e_stop="139386"/>
          <exon e_start="138905" e_stop="138244"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGC</genome_strand>
        <mrna_strand>CAGGTATCAGGCGTGCTGGGTTGTCAATGGGGTAATGAAGGAAAAGGAAAGCTCGTTGATATATTGGCTAAGCAATTTGATATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGCCAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCAGGGATTCTCAATGAGGAAACTATATGTGTTATTGGTAACGGAGTCGTGGTACATCTACCAGGACTTTTTAATGAAATTGACAATCTTGAATCTAATGGAGTTTCTTGCCAGGGAAGGATTTTGGTATCCGATCGTGCTCAGTTGTTATTTGATTTTCACCAAGAAGTAGATGGGCTTAGAGAAGCTGAGCTAGATAAGTCCTTTATTGGAACCACCAAGAGAGGCATAGGGCCTTGCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATGCTGGATATCGATTTTGGGACATATCCTTTTGTCACTTCATCCAGTCCATCAGCTGGTGGAATCTGCACAGGTCTTGGAATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E461404" ref_strand="+" ref_description="SGN-E461404 [cPRO-8-I12]">
      <seq>ggaaagctcgttgatatattggctaagcaatttgatattgttgctcgttgtcagggaggagccaatgctgggcacactatttacaattctgaggggaagaagtttgctctgcaccttgtcccttcagggattctcaatgaggaaactatatgtgttattggtaacggagtcgtggtacatctaccaggactttttaatgaaattgacaatcttgaatctaatggagtttcttgccaaggaaggattttggtatccgatcgtgctcagttgttatttgattttcaccaagaagtagatgggcttagagaagctgagctagataagtcctttattggaaccaccaagagaggcattgggccttgctattcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgatcttttattatcagatgccgcttcaagattccaaggttttaagtatagccctgacatgctcagggaggaagtggaacgctataagaaatttgctgagaggttggaacctttcgttacagataccgtgcacttcatgaatgatgcgatatctcagaaaaagaagattttggtagaaggtggtcaggcaactatngctggatatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139260" stop="138017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138960" g_stop="138317" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E461404" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E461404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138960" e_stop="138317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAAT-GTTGGATATAG</genome_strand>
        <mrna_strand>GGAAAGCTCGTT-GATATATTGGCTAAGCAATTTGATATTGTTGCTCGTTGTCAGGGAGGAGCCAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCAGGGATTCTCAATGAGGAAACTATATGTGTTATTGGTAACGGAGTCGTGGTACATCTACCAGGACTTTTTAATGAAATTGACAATCTTGAATCTAATGGAGTTTCTTGCCAAGGAAGGATTTTGGTATCCGATCGTGCTCAGTTGTTATTTGATTTTCACCAAGAAGTAGATGGGCTTAGAGAAGCTGAGCTAGATAAGTCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCTTGCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTTCAAGATTCCAAGGTTTTAAGTATAGCCCTGACATGCTCAGGGAGGAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCTTTCGTTACAGATACCGTGCACTTCATGAATGATGCGATATCTCAGAAAAAGAAGATTTTGGTAGAAGGTGGTCAGGCAACTATNGCTGGATATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E450150" ref_strand="+" ref_description="SGN-E450150 [cSTS-8-F5]">
      <seq>ggatcgtcaaggggtcaacgagtcaggactgagtcgaattgagtcactgagtcaggtatcaggcgtgctgggttgtcaatggggtgatgaaggaaagggaaagctcgttgatatattggctaagcaatttgatattgttgctcgttgtcagggaggagccaatgctgggcacactatttacaattctgaggggaagaagtttgctctgcaccttgtcccttcagggattctcaatgaggaaactatatgtgttattggtaacggagtcgtggtacatctaccaggactttttaatgaaattgacaatcttgaatctaatggagtttcttgccaaggaaggattttggtatccgatcgtgctcagttgttatttgattttcaccaagaagtagatgggcttagagaagctgagctagataagtcctttattggaaccaccaagagaggcattgggccttgctattcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaagcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139836" stop="138219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139536" g_stop="139386" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.894"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138519" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="538" r_length="387" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E450150" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139536" e_stop="139386"/>
          <exon e_start="138905" e_stop="138519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGAT</genome_strand>
        <mrna_strand>GGATCGTCAAGGGGTCAACGAGTCAGGACTGAGTCGAATTGAGTCACTGAGTCAGGTATCAGGCGTGCTGGGTTGTCAATGGGGTGATGAAGGAAAGGGAAAGCTCGTTGATATATTGGCTAAGCAATTTGATATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGCCAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCAGGGATTCTCAATGAGGAAACTATATGTGTTATTGGTAACGGAGTCGTGGTACATCTACCAGGACTTTTTAATGAAATTGACAATCTTGAATCTAATGGAGTTTCTTGCCAAGGAAGGATTTTGGTATCCGATCGTGCTCAGTTGTTATTTGATTTTCACCAAGAAGTAGATGGGCTTAGAGAAGCTGAGCTAGATAAGTCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCTTGCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E577144" ref_strand="+" ref_description="SGN-E577144 [33157]">
      <seq>caaccatgaggctcgatgccagctcaatcacaacggctacagccaccgcgacggcgaaggtgagtcaccggagtgggatcatcggttacaatgggaccaatagttgtaggctcattcagttccagcaaaggaagaaaaaggcttcttcattgatcgtttgttcgacaaagccgctttcctcggtagtggatcgtcaaggggtcaacgagtcaggactgagtcgaattgagtcactgagtcaggtttcaggcgtgctgggttgtcaatggggtgatgaaggaaaaggaaagctcgttgatatattggctaagcaatttgatattgttgctcgttgtcagggaggagccaatgctgggcacactatttacaattctgaggggaagaagtttgctctgcaccttgtcccttcagggattctcaatgaggaaactatatgtgttattggtaacggagtcgtggtacatctaccaggactttttaatgaaattgacaatcttgaatctaatggagtttcttgccaaggaaggattttggtatctgatcgtgctcagttgttatttgattttcaccaagaagtagatgggcttagagaagctgagctagataagtcctttattggaaccaccaagagaggcattgggccttgctattcaagcaaggttattcgaaatggcataagggtaagtgatttaaggcatatggacacattcccccaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139893" stop="138225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139656" g_stop="139386" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="338" r_length="274" r_score="0.860"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138525" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="719" r_length="381" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E577144" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139656" e_stop="139386"/>
          <exon e_start="138905" e_stop="138525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTC--AATTG-TCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAG</genome_strand>
        <mrna_strand>TCACCGGAGTGGGATCATCGGTTACAATGGGACCAATAGTTGTAGGCTCATTCAGTTCCAGCAAAGGAAGAAAAAGGCTTCTTCATTGATCGTTTGTTCGACAAAGCCGCTTTCCTCGGTAGTGGATCGTCAAGGGGTCAACGAGTCAGGACTGAGTCGAATTGAGTCACTGAGTCAGGTTTCAGGCGTGCTGGGTTGTCAATGGGGTGATGAAGGAAAAGGAAAGCTCGTTGATATATTGGCTAAGCAATTTGATATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGCCAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCAGGGATTCTCAATGAGGAAACTATATGTGTTATTGGTAACGGAGTCGTGGTACATCTACCAGGACTTTTTAATGAAATTGACAATCTTGAATCTAATGGAGTTTCTTGCCAAGGAAGGATTTTGGTATCTGATCGTGCTCAGTTGTTATTTGATTTTCACCAAGAAGTAGATGGGCTTAGAGAAGCTGAGCTAGATAAGTCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCTTGCTATTCAAGCAAGGTTATTCGAAATGGCATAAGGGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E467466" ref_strand="+" ref_description="SGN-E467466 [cSTB-49-E15]">
      <seq>catatctccgtttttagcgtgcacagcgcaaccgcacgccgccgcggcactaccattaccatgaacatctcaactctgaggctcgattccaatccaatcaccacggcaacggcgactcaccggaatgggatcctcggttgcaatgggacctatagttgtaggttcaatcagttccagcagaggaagaagactccttcagttatcgtttgttcgacaaagccgcttgcctcggtagtcgaccatcaaggggttaatgagtcagggatgagtcgaattgagtcactcagtcaggtatccggcgtgttgggttgccaatggggcgatgaaggaaagggaaagctcgttgatatactggctaagcatttcgacattgttgctcgttgtcagggtggagcaaatgctgggcacactatttacaattctgaggggaagaagtttgccctgcaccttgtcccttctgggattctcaacgaggacactctatgtgttattggtaatggagttgtggtgcatctaccgggactttttaaagaaatcgatggtcttgaagctaatggagtctcttgccaaggaaggatcttggtatctgatcgtgcacacttgttatttgattttcaccaagaaatagatgggcttagagaagctgagctagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="140072" stop="138340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139772" g_stop="139386" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138640" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="653" r_length="266" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E467466" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E467466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139772" e_stop="139386"/>
          <exon e_start="138905" e_stop="138640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGC</genome_strand>
        <mrna_strand>CATATCTCCGTTTTTAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTGAGGCTCGATTCCAATCCAATCACCACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTGTAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTCCTTCAGTTATCGTTTGTTCGACAAAGCCGCTTGCCTCGGTAGTCGACCATCAAGGGGTTAATGAGTCAGGGATGAGTCGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAGCATTTCGACATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGCAAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCCCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGACACTCTATGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATCGATGGTCTTGAAGCTAATGGAGTCTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E583322" ref_strand="+" ref_description="SGN-E583322 [9143]">
      <seq>ggaaagctcgttgatatactggctaagcatttcgacattgttgctcgttgtcagggtggagcaaatgctgggcacactatttacaattctgaggggaagaagtttgccctgcaccttgtcccttctgggattctcaacgaggaaactctatgtgttattggtaatggacttgtggtgcatctaccgggactttttaaagaaatcgatggtcttgaagctcatggagtctcttgccaaggaaggatcttggtatctgatcgtgcacacttgttatttgattttcagcaagaaatagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="139260" stop="138363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138960" g_stop="138663" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E583322" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>298</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138960" e_stop="138663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGAT</genome_strand>
        <mrna_strand>GGAAAGCTCGTT-GATATACTGGCTAAGCATTTCGACATTGTTGCTCGTTGTCAGGGTGGAGCAAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCCCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTATGTGTTATTGGTAATGGACTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATCGATGGTCTTGAAGCTCATGGAGTCTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCAGCAAGAAATAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E590890" ref_strand="+" ref_description="SGN-E590890 [44686]">
      <seq>ctcctcatttctcattcctctctcttgcatatctccgtttttagcgtgcacagcgcaaccgcacgccgccgcggcactaccattaccatgaacatctcaactctgaggctcgattccaatccaatcaccacggcaacggcgactcaccggaatgggatcctcggttgcaatgggacctatagttgtaggttcaatcagttccagcagaggaagaagactccttcagttatcgtttgttcgacaaagccgcttgcctcggtagtcgaccatcaaggggttaatgagtcagggatgagtcgaattgagtcactcagtcaggtatccggcgtgttgggttgccaatggggcgatgaaggaaagggaaagctcgttgatatactggctaagcatttcgacattgttgctcgttgtcagggtggagcaaatgctgggcacactatttacaattctgaggggaagaagtttgccctgcaccttgtcccttctgggattctcaacgaggaaactctatgtgttattggtaatggagttgtggtgcatctaccgggactttttaaagaaatcgatggtcttgaagctaatggagtctcttgccaaggaaggatcttggtatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="140094" stop="138405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139799" g_stop="139386" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138705" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="615" r_length="201" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E590890" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139799" e_stop="139386"/>
          <exon e_start="138905" e_stop="138705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAACATTTCTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCT</genome_strand>
        <mrna_strand>CTCCTCATTTCTCATTCCTCTCTCTTGCATATCTCCGTTTTTAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTGAGGCTCGATTCCAATCCAATCACCACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTGTAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTCCTTCAGTTATCGTTTGTTCGACAAAGCCGCTTGCCTCGGTAGTCGACCATCAAGGGGTTAATGAGTCAGGGATGAGTCGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAGCATTTCGACATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGCAAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCCCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTATGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATCGATGGTCTTGAAGCTAATGGAGTCTCTTGCCAAGGAAGGATCTTGGTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E557589" ref_strand="+" ref_description="SGN-E557589 [16411]">
      <seq>aacattttcctcctcatttctcattcctctctcttgcatatctccgtttttagcgtgcacagcgcaaccgcacgccgccgcggcactaccattaccatgaacatctcaactctgaggctcgattccaatccaatcaccacggcaacggcgactcaccggaatgggatcctcggttgcaatgggacctatagttgtaggttcaatcagttccagcagaggaagaagactccttcagttatcgtttgttcgacaaagccgcttgcctcggtagtcgaccatcaaggggttaatgagtcagggatgagtcgaattgagtcactcagtcaggtatccggcgtgttgggttgccaatggggcgatgaaggaaagggaaagctcgttgatatactggctaagcatttcgacattgttgctcgttgtcagggtggagcaaatgctgggcacactatttacaattctgaggggaagaagtttgccctgcaccttgtcccttctgggattctcaacgaggaaactctatgtgttattggtaatggagttgtggtgcatctaccgggactttttaaagaaatcgatggtcttgaagctaatggagtctcttgccaaggaaggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="140094" stop="138415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139793" g_stop="139386" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="423" r_length="408" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138715" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="614" r_length="191" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E557589" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139793" e_stop="139386"/>
          <exon e_start="138905" e_stop="138715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGAT</genome_strand>
        <mrna_strand>ATTTCTCATTCCTCTCTCTTGCATATCTCCGTTTTTAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTGAGGCTCGATTCCAATCCAATCACCACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTGTAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTCCTTCAGTTATCGTTTGTTCGACAAAGCCGCTTGCCTCGGTAGTCGACCATCAAGGGGTTAATGAGTCAGGGATGAGTCGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAGCATTTCGACATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGCAAATGCTGGGCACACTATTTACAATTCTGAGGGGAAGAAGTTTGCCCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTATGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATCGATGGTCTTGAAGCTAATGGAGTCTCTTGCCAAGGAAGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E248661" ref_strand="+" ref_description="SGN-E248661 [cLEF-58-G15]">
      <seq>cttattcctctctcttgcatatctccgtttatagcgtgcacagcgcaaccgcacgccgccgcggcactaccattaccatgaacatctcaactctaagactcgattccaatccaatcactacggcaacggcgactcaccggaatgggatcctcggttgcaatgggacctatagttataggttcaatcagttccagcagaggaagaagactgcttcaattgtcgtttgttcgacaaagcctcttgcctcggtagtggaccatcagggggttaatgagtcaggactgagacgaattgagtcactcagtcaggtatccggcgtgttgggttgccaatggggcgatgaaggaaagggaaagctcgttgatatactggctaaacatttcgacattgttgctcgttgtcagggtggagccaatgctgggcatactatatacaattctgaggggaagaagtttgctctgcaccttgtcccttctgggattctcaacgaggaaactctgtgtgttattggtaatggagttgtggtgcatctaccgggactttttaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="140089" stop="138461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139789" g_stop="139386" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="404" r_length="404" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138761" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="549" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E248661" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139789" e_stop="139386"/>
          <exon e_start="138905" e_stop="138761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAG</genome_strand>
        <mrna_strand>CTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E297376" ref_strand="+" ref_description="SGN-E297376 [cLEW-10-K7]">
      <seq>aataacattccttatttctctctcttgcatatctgcgtttatagcgtgcacagcgcaaccgcacgccgccgcggcactaccattaccatgaacatctcaactctaagactcgattccaatccaatcactacggcaacggcgactcaccggaatgggatcctcggttgcaatgggacctatagttataggtgcaatcagttccagcagaggaagaagactgcttcaattgtcgatcgttcgacaaagcctcttgcctcggtagtggaccatcagggggttaatgagtcaggactgagacgaattgagtcactcattcaggtatccggcgtgtggggttgccaatggggcgatgaaagaaagggaaagctcgttgatatactggctaaacatttcgacattgttgctcgatgtcagggtggagccaatgctgggcatactatatacaattctgaggggaagaagtttgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="140099" stop="138551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139799" g_stop="139386" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138905" g_stop="138851" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="469" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E297376" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297376" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139799" e_stop="139386"/>
          <exon e_start="138905" e_stop="138851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAACATTTCTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAGGTATATTTATATGAGTTTATGTTCATAAACAATTTGATATGCATGATATCTTAACCTTGTAAAGGTGAGTAATAACTTGCTTTAACCGCTTAAATAACACTCATACTGCAAAGCTAACATCTTGGAGTAAATTTTAGGCCATATCAAGAACAGTATTTGCTTTGTTATGTGGAAATTCTGTGAGATATGCTTGGTTGCAGTAAGTGGGTGAATTAGGGTAAAGGAGGCCTCCTAAAGATGCCTAGTGGAACCTTGGTTTCATAGTTCTGTAGAGAACTGTTTCAAATTCTATATTATGAAATTATCAATGTTTATATCAAATATTTTTTTTTTAATGTTTCATACGTATTACTTATTACCAATTTGTTTTAAACTTAATATTTTTTTGCTATCCTGTCATTCCATTTTACTTATATTGCCTGAGAGATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTC</genome_strand>
        <mrna_strand>AATAACATTCCTTATTTCTCTCTCTTGCATATCTGCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTGCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGATCGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCATTCAGGTATCCGGCGTGTGGGGTTGCCAATGGGGCGATGAAAGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGATGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E719255" ref_strand="+" ref_description="SGN-E719255 [FC07BA03]">
      <seq>cgtccgtgaaacccttagcgccctcaaaaggcgcgctangagnccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143562" stop="23672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143262" g_stop="142707" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142706" i_stop="139912" i_length="2795">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.843" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139911" g_stop="139849" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="619" r_length="63" r_score="0.571"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E719255" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143262" e_stop="142707"/>
          <exon e_start="139911" e_stop="139849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATATTGTTCGCTTGTAATTGTGTTTAATAGTATGTTATGCTTGGATCAGGTTATGTGATTGACAGGTTAGTTTGTCTGTGATTTGAGAAAATTCAAGTATGATGGTTGTGTTAGACTAGTTAAATATGGGCGACTGAGTTCAATTAGTCGACTATGCCTCAATCCCAAGCTGGTCGCGTGTCTGCTCGCCTGCTGCATTTATACCAAAAAGAAAACCTGCAAACTGAACTAGGCAAGAAAACTACTTTGAGAAGGATGAATTATGCTTGTTTAAGGTTCCATTCTCTCGATATAGAGGGTGAAGGGGCGGGGGAGAGGCATGCTTGTTTAAGGTTCACTGTTAGTGACAGAGTTGGGTGTGGGGTGGGGAGGGAAGGGAAAACACCTAAGAAGTTATCTTACCTGTTGGAGTAATGCCACTTATTTTCAAGTGTTCTGATTGCTAGTTGTAGGCTTGGAATAATATTTCCTAAGAAGTTATCTTGCCTTTATAGGTTGATCTTGCCATTTGTAGTAACATCCCTCTCTTATTTGCAAGTGTGCTACTCACATGTTACTTGAGAATTGAGATATCAAGTTTCTGAGAAGTAATTTTGCCTTTCTATGTTTCGGGTCAGCATGCTTAAACTTTGAGGTTCTTGTGTCCTACGCTAGAATACTTGTATGAACTTAAGGTTTCTTGATCTGTTGGATGTGTGAGTGGAGGTGCACGTGCAAGTGGTTGGTTTCACTGCGAGTCTTGCAACTTGCACATCATAAGTTTCCATTCAAGGAGAAGGTCTTGGCACATAGATTATTGAGGAGTTAGACGACTTGCACATAAAGTTGGTGAGAATTTTTCTTTTTGATGAGGTAAGTATTTTATTCATAAGAGCAACTATGAGTTGGTAATGACATATTTGTACAAGGCTAGCAGCATTCCTTTTACTACCGTAGGGGATATATATGAAATCTAATAGAGGGTCAGCAGCAATTACAAGCTCCACTTTACACCAAAAGCAAAGCAAAAGAATTCAAGGGTCATACAGTATTACTGATTAGGTCATTGTGATATGGGGTTGCTGGAAATGGCAATGGAAAGACTCAAGGAGATGGAGGAGAAAGGTTGTGGAGATTACAACGGTTATTTTCACTACTATACTACATCCATTCTACAAGAAAGGGAAGAGTGATGAGGCGGAGAAGTTATGAGACGAGATGGTGAACAGAGGGTGTGGTCCAGATGTTGGTGCGTACAATGTGAAGATTATGAACATTCAGGGTGGTGATCTGGAGGGCATGAAAACTTTAATTGAGGAAATGAGCGATGCTGGATTAAATCCTGATACGATTAGCTACAGTTACTCGATGACTTGTTATTGTAAGAATGAATTGATGGACGAGGCAGAGATGGTTTATGAGGATCTGGAGAAAAATGAGTGTAATGCAAATTCTGCAACTTTTAGGACTTTAATCTTTATTTGTGTAAGAAGGGAAGGTTTGAGACTGGTTATAAGGTGTTCAAGGAGAGTGTGAAAGTTCAAAAGATCCCGGATTTCGATACACTCAAGAATTTGGTGGAAGGGTTGGTGAAGAAATCAAAGTTGAAAGATGCAAAAGGGATGAGTAGGACCGTGAAGAAGAAGTTCCCTCCTAATTTGGTAAAAGCTTGGACCAAGCTAGAGGAGGAGCTTGGTTTGGCTGAAGCCCCTGATATTAGAGTCCAATAAGACTAGTTTGACTGTGTAGGTGGATGTTTTTGGACGATTTTGTTAGCTTGAAGTGTTTATACTCATTTTCATTACTTAGATGGCTTTTAGATCATTGAATTTCTCTTGTTTATCATAAAGATGTGAGTTCTAACTTGGGACCTCCCATTGTTATGACCTTTATGAAGTTAATATAGAGCTTTACATGATGTTTGAACTCCATGAGCTAAATGTCCTGTTGATCCATTGCTTTGTTCTTCTCCCTCATGAATAGGTTAACCAGGCATGAAATATGTAATACACAAAGCCACCTTCACTTACCACCATTATCACTCCATTCATTTCAACTTGTTTGTCTTGGTTACTAGAATATTTTGAAATAAGTTCTACTCTTTGATTTGGTTTGGTCAATGCACACAGCATATCAACGTATTTAAGATTGATCTGGCCATGTTCGGACAGAAACTAAATTCCTGGCGAGTAATATGTAGCGCCAACAAATAAGGAGAACTTGATGTAGTGTCACTGCATCAAGTTATACGCCGAGTGAATTTAGTCCGATTGACTTTGATTCCATGCGTTCTCATTAAACGAACAACAAAGACAAATTTAACACAGATCAATTTTAAGGAAAATTCGCGCAAAAACTTGATCCAAGTACTCATTCAACGTCATGCACATCAAGCCACAAATGGCCCAAACACTGATTCTGCCTTTTTTATTATTATTACTATTAATAATCAAATTATATACTCTCCTTTGTTGTTTATTTGTTTTCACTTGATAAGGGTTTAAAAAGTTAAAAACAATTCTAAATTTTGTGGATGTACCTAAAGTAAATGTCATTTAAAGAGTACTTTAACGGGATTAATTTATTTGTCATCAATATCCTTTTTTAAAAAATAAAGAGTTATTTCAAATCACCAATGTTAAAATATGAGTGTGTTTTTACTGTTATTCAGTTAGATTTTCTACACTAATAATTAGTCAATACTTATTATATTCAATTATATTTTTATTTTTTAAATAATAAATATCTTAATTTATTTTCTAACAAGGATAATAAAGTTGTTCAATAAAACTAGAAAAAGGAAACAAAGAGAGAAACGAGAAGATATGAA</genome_strand>
        <mrna_strand>CGTCCGTGAAACCCTTAGCGCCCTCAAAAGGCGCGCTANGAGNCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E287263" ref_strand="+" ref_description="SGN-E287263 [cLES-15-K9]">
      <seq>gcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcagtttcactcgggaaaaaaaaaaaaaaaaaaaacctcgagatagtaatttttgagttctgatagttggaggagacaataatggcaagtaacaatatggagcttcctgcgcctctgtcttggaagaaactgctcatgccgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143408" stop="25645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143108" g_stop="142661" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142660" i_stop="142432" i_length="229">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.57"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142431" g_stop="142390" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="489" r_length="41" r_score="0.571"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142389" i_stop="141293" i_length="1097">
            <donor d_prob="0.000" d_score="0.57"/>
            <acceptor a_prob="0.821" a_score="0.54"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="141292" g_stop="141238" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="543" r_length="54" r_score="0.545"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="141237" i_stop="140696" i_length="542">
            <donor d_prob="0.347" d_score="0.56"/>
            <acceptor a_prob="0.960" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140695" g_stop="140664" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="575" r_length="32" r_score="0.469"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E287263" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143108" e_stop="142661"/>
          <exon e_start="142431" e_stop="142390"/>
          <exon e_start="141292" e_stop="141238"/>
          <exon e_start="140695" e_stop="140664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATATTGTTCGCTTGTAATTGTGTTTAATAGTATGTTATGCTTGGATCAGGTTATGTGATTGACAGGTTAGTTTGTCTGTGATTTGAGAAAATTCAAGTATGATGGTTGTGTTAGACTAGTTAAATATGGGCGACTGAGTTCAATTAGTCGACTATGCCTCAATCCCAAGCTGGTCGCGTGTCTGCTCGCCTGCTGCATTTATACCAAAAAGAAAACCTGCAAACTGAACTAGGCAAGAAAACTACTTTGAGAAGGATGAATTATGCTTGTTTAAGGTTCCATTCTCTCGATATAGAGGGTGAAGGGGCGGGGGAGAGGCATGCTTGTTTAAGGTTCACTGTTAGTGACAGAGTTGGGTGTGGGGTGGGGAGGGAAGGGAAAACACCTAAGAAGTTATCTTACCTGTTGGAGTAATGCCACTTATTTTCAAGTGTTCTGATTGCTAGTTGTAGGCTTGGAATAATATTTCCTAAGAAGTTATCTTGCCTTTATAGGTTGATCTTGCCATTTGTAGTAACATCCCTCTCTTATTTGCAAGTGTGCTACTCACATGTTACTTGAGAATTGAGATATCAAGTTTCTGAGAAGTAATTTTGCCTTTCTATGTTTCGGGTCAGCATGCTTAAACTTTGAGGTTCTTGTGTCCTACGCTAGAATACTTGTATGAACTTAAGGTTTCTTGATCTGTTGGATGTGTGAGTGGAGGTGCACGTGCAAGTGGTTGGTTTCACTGCGAGTCTTGCAACTTGCACATCATAAGTTTCCATTCAAGGAGAAGGTCTTGGCACATAGATTATTGAGGAGTTAGACGACTTGCACATAAAGTTGGTGAGAATTTTTCTTTTTGATGAGGTAAGTATTTTATTCATAAGAGCAACTATGAGTTGGTAATGACATATTTGTACAAGGCTAGCAGCATTCCTTTTACTACCGTAGGGGATATATATGAAATCTAATAGAGGGTCAGCAGCAATTACAAGCTCCACTTTACACCAAAAGCAAAGCAAAAGAATTCAAGGGTCATACAGTATTACTGATTAGGTCATTGTGATATGGGGTTGCTGGAAATGGCAATGGAAAGACTCAAGGAGATGGAGGAGAAAGGTTGTGGAGATTACAACGGTTATTTTCACTACTATACTACATCCATTCTACAAGAAAGGGAAGAGTGATGAGGCGGAGAAGTTATGAGACGAGATGGTGAACAGAGGGTGTGGTCCAGATGTTGGTGCGTACAATGTGAAGATTATGAACATTCAGGGTGGTGATCTGGAGGGCATGAAAACTTTAATTGAGGAAATGAGCGATGCTGGATTAAATCCTGATACGATTAGCTACAGTTACTCGATGACTTGTTATTGTAAGAATGAATTGATGGACGAGGCAGAGATGGTTTATGAGGATCTGGAGAAAAATGAGTGTAATGCAAATTCTGCAACTTTTAGGACTTTAATCTTTATTTGTGTAAGAAGGGAAGGTTTGAGACTGGTTATAAGGTGTTCAAGGAGAGTGTGAAAGTTCAAAAGATCCCGGATTTCGATACACTCAAGAATTTGGTGGAAGGGTTGGTGAAGAAATCAAAGTTGAAAGATGCAAAAGGGATGAGTAGGACCGTGAAGAAGAAGTTCCCTCCTAATTTGGTAAAAGCTTGGACCAAGCTAGAGGAGGAGCTTGGTTTGGCTGAAGCCCCTGATATTAGAGTCCAATAAGACTAGTTTGACTGTGTAGGTGGATGTTTTTGGACGATTTTGTTAGCTTGAAGTGTTTATACTCATTTTCATTACTTAGATGGCTTTTAGATCATTGAATTTCTCTTGTTTATCATAAAGATGTGAGTTCTAACTTGGGACCTCCCATTGTTATGACCTTTATGAAGTTAATATAGAGCTTTACATGATGTTTGAACTCCATGAGCTAAATGTCCTGTTGATCCATTGCTTTGTTCTTCTCCCTCATGAATAGGTTAACCAGGCATGAAATATGTAATACACAAA</genome_strand>
        <mrna_strand>GCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAA.....................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAACCTCGAGATAG-TAATTTTTGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG-ATAGTTGGAGGAGACAATAATGGCAAGTAACAATATGGAGCTTCCTGCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTCTTGGAAGAAACTGCTCATGCCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E457397" ref_strand="+" ref_description="SGN-E457397 [cPRO-2-J1]">
      <seq>ctagtctcgagttttttttttttttttttttttcatttcacaattatcatattgctgcgcttacagcatccaacgtttcattaaaactgaacaaaacagtaagctcaaacatcaagtctacgcttaaaagtcatataacatttatttcccaactttctaaaaacacaaactataaacaaggaaaactatccccatttatcgaagccctaatttgacaatccaaaaaagggcggaattcaaaaccatacccgagcagatccacataaaattattccgcatcagcggattcaagttcgaggcgttttagggcttcttgggggggccaagtttcaaggggtgagatcgggctttggcattgagtcccacaccgaggatgacgatggtgaagaagctgggtgatgtagcaaggggagttccccaatcctcccatttttcgggactgtccagggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="123881" stop="143392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142091" g_stop="142107" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="0.588"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142108" i_stop="142441" i_length="334">
            <donor d_prob="0.141" d_score="0.00"/>
            <acceptor a_prob="0.874" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142442" g_stop="142453" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="29" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142454" i_stop="142699" i_length="246">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="142700" g_stop="143110" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="451" r_length="422" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E457397" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142091" e_stop="142107"/>
          <exon e_start="142442" e_stop="142453"/>
          <exon e_start="142700" e_stop="143110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCTCAAGTAACATGTGAGTAGCACACTTGCAAATAAGAGAGGGATGTTACTACAAATGGCAAGATCAACCTATAAAGGCAAGATAACTTCTTAGGAAATATTATTCCAAGCCTACAACTAGCAATCAGAACACTTGAAAATAAGTGGCATTACTCCAACAGGTAAGATAACTTCTTAGGTGTTTTCCCTTCCCTCCCCACCCCACACCCAACTCTGTCACTAACAGTGAACCTTAAACAAGCATGCCTCTCCCCCGCCCCTTCACCCTCTATATCGAGAGAATGGAACCTTAAACAAGCATAATTCATCCTTCTCAAAGTAGTTTTCTTGCCTAGTTCAGTTTGCAGGTTTTCTTTTTGGTATAAATGCAGCAGGCGAGCAGACACGCGACCAGCTTGGGATTGAGGCATAGTCGACTAATTGAACTCAGTCGCCCATATTTAACTAGTCTAACACAACCATCATACTTGAATTTTCTCAAATCACAGACAAACTAACCTGTCAATCACATAACCTGATCCAAGCATAACATACTATTAAACACAATTACAAGCGAACAATATGCATTCCCGAGTGAAACTGAAAAAGAATAATATTGTCAACCATTGTCATTTCACAATTATCATATTGCTGCGTTTACAGCATCCAACGTTTCATTAGAACTGAACAAAACAGTAAGCTCAAACTTCAAGTCTACGCTTAAAAGT--TTTAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAAAACCATACCCGAGCAGATCCACAT---ATTATTCCGCATCGGCGGATTCAAGTTCGAGGCGTTTTAGGGCTTCTTGGTGGGCCCAAGTTTCAA-GGGTGAGATCGGGC-TTGGCATTGAGTCCCACACCCAGGATGACGATGGTGAAGAAGCT-GGTGATGTAGCAA-GGGAGTT-CCCAATCCTCCCA-TTTACGGGACTGTCCAGGCGG</genome_strand>
        <mrna_strand>CTAGTCTCGAGTTTTTT..............................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTT......................................................................................................................................................................................................................................................TTTTCATTTCACAATTATCATATTGCTGCGCTTACAGCATCCAACGTTTCATTAAAACTGAACAAAACAGTAAGCTCAAACATCAAGTCTACGCTTAAAAGTCATATAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAAAACCATACCCGAGCAGATCCACATAAAATTATTCCGCATCAGCGGATTCAAGTTCGAGGCGTTTTAGGGCTTCTTGGGGGGGCCAAGTTTCAAGGGGTGAGATCGGGCTTTGGCATTGAGTCCCACACCGAGGATGACGATGGTGAAGAAGCTGGGTGATGTAGCAAGGGGAGTTCCCCAATCCTCCCATTTTTCGGGACTGTCCAGGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E403493" ref_strand="+" ref_description="SGN-E403493 [PPC-10-D24]">
      <seq>ccaggatcgacctaacggatacttattcaaccgtgttccaccaccgcctggacagtcccgaaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttattatcactcacggatgtgtattgtttgcttgtaattgtgtttaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143453" stop="142329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143153" g_stop="142619" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="539" r_length="539" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E403493" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E403493" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143153" e_stop="142619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATATTGTTCGCTTGTAATTGTGTTTAATAGTATGTTATG</genome_strand>
        <mrna_strand>CCAGGATCGACCTAACGGATACTTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTT-ATTATCACTCACGGATGTGTATTGTTTGCTTGTAATTGTGTTTAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E712073" ref_strand="+" ref_description="SGN-E712073 [FB03DC06]">
      <seq>gtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcnnnaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143574" stop="23687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143274" g_stop="142651" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="624" r_length="624" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E712073" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143274" e_stop="142651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATATTGT</genome_strand>
        <mrna_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCNNNAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E717318" ref_strand="+" ref_description="SGN-E717318 [FB19DD09]">
      <seq>gtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcagtttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143574" stop="23693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143274" g_stop="142653" g_length="622"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="622" r_length="622" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E717318" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143274" e_stop="142653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATATT</genome_strand>
        <mrna_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E321733" ref_strand="+" ref_description="SGN-E321733 [cTOB-25-E4]">
      <seq>ccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtggttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaangttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcagtttcactcggggaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143479" stop="142361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143179" g_stop="142655" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E321733" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321733" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143179" e_stop="142655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATA</genome_strand>
        <mrna_strand>CCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGGTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAANGTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E287695" ref_strand="+" ref_description="SGN-E287695 [cLES-9-J11]">
      <seq>tgaattccgccctttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcagtttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143207" stop="142369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142907" g_stop="142657" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E287695" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>251</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142907" e_stop="142657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTCCGCCCTTTTT-TGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCA</genome_strand>
        <mrna_strand>TGAATTCCGCCCTTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235081" ref_strand="+" ref_description="SGN-E235081 [cLEL-6-D2](-)">
      <seq>acagtaccgtaaatggaaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgncaatattattctttttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143402" stop="25648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143102" g_stop="142658" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="445" r_length="445" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E235081" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143102" e_stop="142658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGC</genome_strand>
        <mrna_strand>ACAGTACCGTAAATGGAAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGNCAATATTATTCTTTTTAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E234601" ref_strand="+" ref_description="SGN-E234601 [cLEL-6-D2](-)">
      <seq>tcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143340" stop="25648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143040" g_stop="142658" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E234601" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143040" e_stop="142658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGC</genome_strand>
        <mrna_strand>TCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E458520" ref_strand="+" ref_description="SGN-E458520 [cPRO-6-A23]">
      <seq>tgggaactcccttgctacatcaccagcttcttcaccatcgtcatccttggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttattttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143380" stop="142369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143080" g_stop="142660" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="423" r_length="423" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E458520" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143080" e_stop="142660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAAT</genome_strand>
        <mrna_strand>TGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTTGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTT-ATTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E334850" ref_strand="+" ref_description="SGN-E334850 [cTOE-3-K14]">
      <seq>ggcgtccgtgaaacccttagcgaccgcccgccggcgcgctacgaagccccgtgttagttcgggccctccgcaccagaggaggacaccgggccgaatccattcaccactgcgggccaccaggatcgacctaaccggataccctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattattctttttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143564" stop="142375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143264" g_stop="142666" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E334850" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143264" e_stop="142666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGTCCGTGAAACCCTTAGCGACCG-CCGCCGGCGCGCTACG-AG-CCCGTGTTAGTTCGGG-CCTCCGCACCAGAGGAGGACA-CGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAA-CGGATA-CCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTC</genome_strand>
        <mrna_strand>GGCGTCCGTGAAACCCTTAGCGACCGCCCGCCGGCGCGCTACGAAGCCCCGTGTTAGTTCGGGCCCTCCGCACCAGAGGAGGACACCGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACCGGATACCCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E711358" ref_strand="+" ref_description="SGN-E711358 [FB01DB10]">
      <seq>ccttgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143423" stop="25648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143123" g_stop="142667" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E711358" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143123" e_stop="142667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACT</genome_strand>
        <mrna_strand>CCTTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E216826" ref_strand="+" ref_description="SGN-E216826 [cLEL-1-G15](-)">
      <seq>tacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143434" stop="25648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143134" g_stop="142672" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E216826" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143134" e_stop="142672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTT</genome_strand>
        <mrna_strand>TACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E430280" ref_strand="+" ref_description="SGN-E430280 [STM-53-M20]">
      <seq>gggccccccctcgagtttttttttctttttttttcacaattatcatattgctgcgcttacagcatccaacgtttcattaaaactgaacaaaacagtaagctcaaacatcaagtctacgcttaaaagtcatataacatttatttcccaactttctaaaaacacaaactataaacaaggaaaactatccccatttatcgaagccctaatttgacaatccaaaaaagggcggaattcaaaaccatacccgagcagatccacataaaattattccgcatcagcggattcaagttcgaggcgttttagggcttcttggtgggcccaagtttcaagggtgagatcgggcttggcattgagtcccacaccgaggatgacgatggtgaagaagctggtgatgtagcaagggagttcccaatcctcccattttcgggactgtccaggcggtggtggaacacggttgaataagtatccgttaggtcgatcctggtggcccgcagtggtgaatggatttggcccgtgtcctcctctggtgcggaggcccgaactaacacgggctcgtagcgcgccggcggcggtcgctaagggtttcacggacggcatcgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="51099" stop="143571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142675" g_stop="143271" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="602" r_length="602" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E430280" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E430280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142675" e_stop="143271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAAAGAATAATATTGTCAACCATTGTCATTTCACAATTATCATATTGCTGCGTTTACAGCATCCAACGTTTCATTAGAACTGAACAAAACAGTAAGCTCAAACTTCAAGTCTACGCTTAAAAGT--TTTAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAAAACCATACCCGAGCAGATCCACAT---ATTATTCCGCATCGGCGGATTCAAGTTCGAGGCGTTTTAGGGCTTCTTGGTGGGCCCAAGTTTCAAGGGTGAGATCGGGCTTGGCATTGAGTCCCACACCCAGGATGACGATGGTGAAGAAGCTGGTGATGTAGCAAGGGAGTTCCCAATCCTCCCATTTACGGGACTGTCCAGGCGGTGGTGGAACACGGTTGAATAGGTATCCGTTAGGTCGATCCTGGTGGCCCGCAGTGGTGAATGGATTCGGCCCGTGTCCTCCTCTGGTGCGGAGGCCCGAACTAACACGGGCTCGTAGCGCGCCGGCGGCGGTCGCTAAGGGTTTCACGGACGGCATCGTTG</genome_strand>
        <mrna_strand>GGGCCCCCCCTCGAGTTTTTTTTTCTTTTTTTTTCACAATTATCATATTGCTGCGCTTACAGCATCCAACGTTTCATTAAAACTGAACAAAACAGTAAGCTCAAACATCAAGTCTACGCTTAAAAGTCATATAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAAAACCATACCCGAGCAGATCCACATAAAATTATTCCGCATCAGCGGATTCAAGTTCGAGGCGTTTTAGGGCTTCTTGGTGGGCCCAAGTTTCAAGGGTGAGATCGGGCTTGGCATTGAGTCCCACACCGAGGATGACGATGGTGAAGAAGCTGGTGATGTAGCAAGGGAGTTCCCAATCCTCCCATTTTCGGGACTGTCCAGGCGGTGGTGGAACACGGTTGAATAAGTATCCGTTAGGTCGATCCTGGTGGCCCGCAGTGGTGAATGGATTTGGCCCGTGTCCTCCTCTGGTGCGGAGGCCCGAACTAACACGGGCTCGTAGCGCGCCGGCGGCGGTCGCTAAGGGTTTCACGGACGGCATCGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E343330" ref_strand="+" ref_description="SGN-E343330 [cTOF-17-L8]">
      <seq>tttcgttcatctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgaccatggttgacaataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143586" stop="142388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143286" g_stop="142679" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="608" r_length="608" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E343330" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143286" e_stop="142679"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCGTTCATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTT</genome_strand>
        <mrna_strand>TTTCGTTCATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACCATGGTTGACAATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E333116" ref_strand="+" ref_description="SGN-E333116 [cTOD-19-J13]">
      <seq>atctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgccctttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143578" stop="142388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143278" g_stop="142679" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E333116" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143278" e_stop="142679"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCC-TTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTT</genome_strand>
        <mrna_strand>ATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E732645" ref_strand="+" ref_description="SGN-E732645 [LB02DA04]">
      <seq>gaggctttcgttcatctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataattgtgaaatgacaatggttgacaatattaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143587" stop="142385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143291" g_stop="142686" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="607" polyA_stop="621"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E732645" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143291" e_stop="142686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACACTTTCGTTCATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATT</genome_strand>
        <mrna_strand>GAGGCTTTCGTTCATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E564575" ref_strand="+" ref_description="SGN-E564575 [2824]">
      <seq>atccattcaccactgcgggccaccaggatcgacctaacggatacttattcaaccgtgttccaccaccgcctggacagtcccgaaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgccctttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagcaatatgataattgtgaaatgacaatggttgacaataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143475" stop="142388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143175" g_stop="142689" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="494" polyA_stop="507"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E564575" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E564575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143175" e_stop="142689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCC-TTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAAT</genome_strand>
        <mrna_strand>ATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACTTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E293050" ref_strand="+" ref_description="SGN-E293050 [cLET-12-M19]">
      <seq>tgaaatgacaatggttgacaatattatattgctgcgtttacagcatccaacgtttcattagaactgaacaaaacagtaagctcaaacttcaagtctacgcttaaaagttttaacatttatttcccaactttctaaaaacacaaactataaacaaggaaaactatccccatttatcgaagccctaatttgacaatccaaaaaagggcggaattcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="142407" stop="143208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142691" g_stop="142908" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E293050" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>218</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142691" e_stop="142908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAACCATTGTCATTTCACAATTATCATATTGCTGCGTTTACAGCATCCAACGTTTCATTAGAACTGAACAAAACAGTAAGCTCAAACTTCAAGTCTACGCTTAAAAGTTTTAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAA</genome_strand>
        <mrna_strand>TG-AAATGACAAT-GGTTGACAA-TATTATATTGCTGCGTTTACAGCATCCAACGTTTCATTAGAACTGAACAAAACAGTAAGCTCAAACTTCAAGTCTACGCTTAAAAGTTTTAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E733027" ref_strand="+" ref_description="SGN-E733027 [LB03DB04]">
      <seq>ttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143548" stop="23694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143248" g_stop="142692" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E733027" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143248" e_stop="142692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGAC</genome_strand>
        <mrna_strand>TTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E617160" ref_strand="+" ref_description="SGN-E617160 [90635]">
      <seq>agtggatcccccgggctgcagaaacgggccaatcattcaccactgcgggccacaggatcgactaacggatattatcaaccgtgttccacaccgnctggacagtcccgaaaatgggaggattgggaactccctttgctacattcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagcaatatgataattgtgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143491" stop="142400"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143187" g_stop="142694" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="514" r_length="494" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E617160" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E617160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143187" e_stop="142694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCC-TTGCTACA-TCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTG</genome_strand>
        <mrna_strand>GAAACGGGCC-AAT-CATTCACCACTGCGGGCCA-CAGGATCGA-CTAACGGATA-TTA-TCAACCGTGTTCCA-CACCGNCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTTGCTACATTCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGCAATATGATAATTGTGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E461556" ref_strand="+" ref_description="SGN-E461556 [cPRO-8-H22]">
      <seq>caacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccaaatccattcaccactgcgggccaccaggatcgacctaacggatacttattcaaccgtgttccaccaccgcctggacagtcccgaaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagcaatatgataattgtgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143571" stop="142400"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143271" g_stop="142698" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="579" r_length="579" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E461556" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E461556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143271" e_stop="142698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATG</genome_strand>
        <mrna_strand>CAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCAAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACTTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGCAATATGATAATTGTGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E430279" ref_strand="+" ref_description="SGN-E430279 [STM-53-M20]">
      <seq>caacgatgccgtccgtgaaacccttagcgaccgccgccggctcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccaaatccattcaccactgcgggccaccaggatcgacctaacggatacttattcaaccgtgttccaccaccgcctggacagtcccgaaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagcaatatgataattgttgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143571" stop="142400"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143271" g_stop="142700" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E430279" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E430279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143271" e_stop="142700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTG-TGAAATGACAA</genome_strand>
        <mrna_strand>CAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCTCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCAAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACTTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGCAATATGATAATTGTTGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E306050" ref_strand="+" ref_description="SGN-E306050 [cLEY-13-G1]">
      <seq>aacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143570" stop="142414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143270" g_stop="142703" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E306050" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143270" e_stop="142703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGA</genome_strand>
        <mrna_strand>AACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E714154" ref_strand="+" ref_description="SGN-E714154 [FB10CF11]">
      <seq>gtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttggatgctgtaaacgcagcaatatgataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143574" stop="142414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143274" g_stop="142705" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E714154" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143274" e_stop="142705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAAT</genome_strand>
        <mrna_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E573723" ref_strand="+" ref_description="SGN-E573723 [33078]">
      <seq>gtcaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccaaatccattcaccactgcgggccaccaggatcgacctaacggatacttattcaaccgtgttccaccaccgcctggacagtcccgaaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagcaatatgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143574" stop="142414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143274" g_stop="142706" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E573723" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143274" e_stop="142706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAA</genome_strand>
        <mrna_strand>GT-CAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCAAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACTTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGCAATATGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E567687" ref_strand="+" ref_description="SGN-E567687 [11851]">
      <seq>gtcaacgatgccgtccgtgaaaccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccaaatccattcaccactgcgggccaccaggatcgacctaacggatacttattcaaccgtgttccaccaccgcctggacagtcccgaaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctcggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgctgatgcggaataattttatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttatatgacttttaagcgtagacttgatgtttgagcttactgttttgttcagttttaatgaaacgttggatgctgtaagcgcagacaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143574" stop="142420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143274" g_stop="142720" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E567687" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567687" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143274" e_stop="142720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAA---TATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTA-A-AACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAG-CAATA</genome_strand>
        <mrna_strand>GT-CAACGATGCCGTCCGTGAAA-CCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCAAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACTTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGAAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTCGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCTGATGCGGAATAATTTTATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTATATGACTTTTAAGCGTAGACTTGATGTTTGAGCTTACTGTTTTGTTCAGTTTTAATGAAACGTTGGATGCTGTAAGCGCAGACAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550853" ref_strand="+" ref_description="SGN-E550853 [TUS-54-A4]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142740" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550853" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGG</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688568" ref_strand="+" ref_description="SGN-E688568 [t3_tus_54_A04]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatgaaacgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142740" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688568" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688568" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGG</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550854" ref_strand="+" ref_description="SGN-E550854 [TUS-54-A5]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142748" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550854" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGA</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688569" ref_strand="+" ref_description="SGN-E688569 [t3_tus_54_A05]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttctaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142748" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688569" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGA</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688570" ref_strand="+" ref_description="SGN-E688570 [t3_tus_54_A06]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142752" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688570" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTA</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550845" ref_strand="+" ref_description="SGN-E550845 [TUS-54-A11]">
      <seq>tctgtcccacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgggttagttcgggcctccgcaccagaggaggacacgggccgaatccgttcgccactgcgggccaccaggatcgacctaacggatacctattcgacgcgtgttccaccaccgcctggacagtcccggaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccttcgtcatcctgggtgtgggactcgatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142755" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550845" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAAC-CGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</genome_strand>
        <mrna_strand>TCTGTCCCACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGGGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCGTTCGCCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCGACGCGTGTTCCACCACCGCCTGGACAGTCCCGGAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCTTCGTCATCCTGGGTGTGGGACTCGATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688575" ref_strand="+" ref_description="SGN-E688575 [t3_tus_54_A11]">
      <seq>tctgtcccacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgggttagttcgggcctccgcaccagaggaggacacgggccgaatccgttcgccactgcgggccaccaggatcgacctaacggatacctattcgacgcgtgttccaccaccgcctggacagtcccggaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccttcgtcatcctgggtgtgggactcgatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142755" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688575" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAAC-CGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</genome_strand>
        <mrna_strand>TCTGTCCCACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGGGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCGTTCGCCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCGACGCGTGTTCCACCACCGCCTGGACAGTCCCGGAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCTTCGTCATCCTGGGTGTGGGACTCGATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550865" ref_strand="+" ref_description="SGN-E550865 [TUS-54-B3]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttccataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142755" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550865" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCCATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688585" ref_strand="+" ref_description="SGN-E688585 [t3_tus_54_B03]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttccataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttcagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142755" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688585" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688585" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCCATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550855" ref_strand="+" ref_description="SGN-E550855 [TUS-54-A6]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactgttttgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142759" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550855" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTC</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E551311" ref_strand="+" ref_description="SGN-E551311 [TUS-54-A7]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142767" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E551311" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTG</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688571" ref_strand="+" ref_description="SGN-E688571 [t3_tus_54_A07]">
      <seq>tctgtccaacgatgccgtccgtgaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagcttactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143577" stop="142467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143277" g_stop="142767" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688571" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143277" e_stop="142767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTG</genome_strand>
        <mrna_strand>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550846" ref_strand="+" ref_description="SGN-E550846 [TUS-54-A12]">
      <seq>ccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcgccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtagatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaagacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgtagacttgaagtttgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143538" stop="142473"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143238" g_stop="142773" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550846" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143238" e_stop="142773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGC</genome_strand>
        <mrna_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCGCCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAGATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAGACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E715871" ref_strand="+" ref_description="SGN-E715871 [FB15CA06]">
      <seq>cgcgtgcctccgcaccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaacttttaagcgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143508" stop="142487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143210" g_stop="142778" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E715871" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143210" e_stop="142778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTT</genome_strand>
        <mrna_strand>CGCGTGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E335429" ref_strand="+" ref_description="SGN-E335429 [cTOE-2-B22]">
      <seq>tccaacgatgccgtccgggaaacccttagcgaccgccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccacaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattatggcttcgataaatggggatagttatccttgcttataggttgtgtttttagaaagttgggaaataaatgttaaaacttttaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143573" stop="142493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143273" g_stop="142793" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E335429" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143273" e_stop="142793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAG</genome_strand>
        <mrna_strand>TCCAACGATGCCGTCCGGGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCACAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTATGGCTTCGATAAATGGGGATAGTTATCCTTGCTTATAGGTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E250265" ref_strand="+" ref_description="SGN-E250265 [cLEG-6-I1]">
      <seq>caccagaggaggacacgggccgaatccattcaccactgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgttaaaactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143498" stop="142496"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143198" g_stop="142796" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E250265" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143198" e_stop="142796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTT</genome_strand>
        <mrna_strand>CACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688576" ref_strand="+" ref_description="SGN-E688576 [t3_tus_54_A12]">
      <seq>ccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattctccgctgcgggccaccaggatcgacctaacggatacctattcaaccgtgttccaccaccgcctggacagtcccgtagatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143538" stop="142505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143238" g_stop="142805" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688576" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143238" e_stop="142805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTT</genome_strand>
        <mrna_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCTCCGCTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAGATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688579" ref_strand="+" ref_description="SGN-E688579 [t3_tus_54_A15]">
      <seq>ccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcgccactgcgggccaccaggatcgacctaacggatacctattcgaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143538" stop="142506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143238" g_stop="142806" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E688579" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143238" e_stop="142806"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGT</genome_strand>
        <mrna_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCGCCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCGACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550847" ref_strand="+" ref_description="SGN-E550847 [TUS-54-A15]">
      <seq>ccgccggcgcgctacgagcccgtgttagttcgggcctccgcaccagaggaggacacgggccgaatccattcgccactgcgggccaccaggatcgacctaacggatacctattcgaccgtgttccaccaccgcctggacagtcccgtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggcccaccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctcgggtatggttttgaattccgcccttttttggattgtcaaattagggcttcgataaatggggatagttttccttgtttatagtttgtgtttttagaaagttgggaaataaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143538" stop="142507"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143238" g_stop="142807" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E550847" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143238" e_stop="142807"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATG</genome_strand>
        <mrna_strand>CCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCGCCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCGACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E351800" ref_strand="+" ref_description="SGN-E351800 [cTOS-8-A19]">
      <seq>gtaaatgggaggattgggaactcccttgctacatcaccagcttcttcaccatcgtcatcctgggtgtgggactcaatgccaagcccgatctcacccttgaaacttgggccccccaagaagccctaaaacgcctcgaacttgaatccgccgatgcggaataatatgtggatctgctccgggatggttttgaattccccccctttttggattgtccaaataagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="143394" stop="142574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143094" g_stop="142873" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E351800" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>222</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143094" e_stop="142873"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGG</genome_strand>
        <mrna_strand>GTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCCCCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCCGGGATGGTTTTGAATTCCCCCCCTTTTTGGATTGTCCAAATAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365448" ref_strand="+" ref_description="SGN-E365448 [cLPT-2-M2]">
      <seq>tcaaaatttatcatcagatggatgatttaggcacccccagatcagctatttccttcaatgtgcttttatcagcttgcgtgcgctcaaaactatatgatcgtgtcccccagctgtttgatgaaattccagtgaagtatagatttttacctgataaagtgtcgtacggtatactgattaggtcatattgtgaaacggggttgccggaaatggcaatggaaatactcaaggtgatggaggagaaaagtgtggagattacaacggttactttcactactatactacattcattctacaagaaagggaagagtgatgaggcggagaaggtatggaatgagatggtgaacagagggtgtggtccagatgttggtgcatacaatgtgaagattatgaacattcaggggggtgatctggagggcgtgaaagctttaattgaggaaatgaacgatgctggattgaaacctgatacgattagctacaattatttgatgacttgttattgtaagaatgaattgatggacgaggcacagatggtttatgatgatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="145032" stop="143888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144732" g_stop="144188" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E365448" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144732" e_stop="144188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAATTTATCATCAGATGGATGATTTAGGCACCCCCAGACCAGTTATTTCCTTCAATGTGCTTTTATCAGCTTGCGTGCGCTCAAAACTATATGATTGTGTCCCCCAGCTGCTTGATGAAATTTCAGTGAAGTATGGATTTTTACCAGATAAAGTGTCGTACGATATACTAATTAGGTCATATTGTGAAATGAGATCGTCGAAAATGGCAATAAAAATACTCAAGGTGATAGAGGAGAAAAGTGTGGAGATTACAACGATTACTTTCACTACCATACTTCATTCATTCTACAAGAAAGGGAAGAATGATGAGGCGGAGAAGGTATGGAACGAGATGGTGAACAAAGGGTGTGGTCCAGATGTTGGTGCATACAATGTGAAGATCATAAACATTCAGGGGGGTGATTTGGAGGGCGTGAAAGCTTTAATTGAGGAAATG-ACGATGTTGGATTGAAACCTGATACGACTAGCTACAATTACTTGATGACTTGTTATTGTAACAATGAATTGATGGACGAGGCACAAATAGTTTATGATGATCTGG</genome_strand>
        <mrna_strand>TCAAAATTTATCATCAGATGGATGATTTAGGCACCCCCAGATCAGCTATTTCCTTCAATGTGCTTTTATCAGCTTGCGTGCGCTCAAAACTATATGATCGTGTCCCCCAGCTGTTTGATGAAATTCCAGTGAAGTATAGATTTTTACCTGATAAAGTGTCGTACGGTATACTGATTAGGTCATATTGTGAAACGGGGTTGCCGGAAATGGCAATGGAAATACTCAAGGTGATGGAGGAGAAAAGTGTGGAGATTACAACGGTTACTTTCACTACTATACTACATTCATTCTACAAGAAAGGGAAGAGTGATGAGGCGGAGAAGGTATGGAATGAGATGGTGAACAGAGGGTGTGGTCCAGATGTTGGTGCATACAATGTGAAGATTATGAACATTCAGGGGGGTGATCTGGAGGGCGTGAAAGCTTTAATTGAGGAAATGAACGATGCTGGATTGAAACCTGATACGATTAGCTACAATTATTTGATGACTTGTTATTGTAAGAATGAATTGATGGACGAGGCACAGATGGTTTATGATGATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E573850" ref_strand="+" ref_description="SGN-E573850 [33226]">
      <seq>tggagttgaagtttcacttttccatccaaaaaattgcaggagatggatttggacttcgacggtccaagtaaagtcccgagcaggcaagctcgttttgttcccaagaattccaaattgaagccccaacccaaaagtgaaacactgccattgaaggtagattcagatatttcgactaaaaaggaagaattggtatcacaaccccctctaagagatcatataacgaaaaacggagaggcaacggttgaggacgacgttccattgaatggagagacgacgggaaacgaccttgcagaagaacaagccacaatggaaactgatagcgatcgagatgaagttgtccgtgaagttgacgtgtggcttaccccttccgctaatgagttctatgtactccaagtatccgttgagatccgaatggcgtccctatggattggatgaaagaatgccaagacgtgaggttgagaccttcaacggcagaaatggaagttgatttggcaatagattttgattctaagaatttcgacagagactctgtacatgcagcaacgataaaaacagcaggattgtttctacaaaatgggtgccattatctacttgtgctgactttgctgttgggatcctcattggtgataagttacacctcaatcctgttcatgcaagtttgtacaggctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="145894" stop="148918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146194" g_stop="146570" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.958" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146660" g_stop="146728" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="449" r_length="71" r_score="0.899"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139">
            <donor d_prob="0.985" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="146868" g_stop="146975" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="558" r_length="109" r_score="0.944"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="146976" i_stop="147882" i_length="907">
            <donor d_prob="0.982" d_score="0.90"/>
            <acceptor a_prob="0.665" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="147883" g_stop="147954" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="631" r_length="73" r_score="0.944"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="147955" i_stop="148581" i_length="627">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="148582" g_stop="148602" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="652" r_length="21" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E573850" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146194" e_stop="146570"/>
          <exon e_start="146660" e_stop="146728"/>
          <exon e_start="146868" e_stop="146975"/>
          <exon e_start="147883" e_stop="147954"/>
          <exon e_start="148582" e_stop="148602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTGAAGTTTCACTTTTCCATCCAGAAAATTGCA-GTGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGGTAGATTTTCTTGATTCAATATACGTCTGTTTTATTGTTGAATTTGCAAATTTTTCTATTTGTGAAGTATATTTTCTTTTCTTTTTCAGTTCTATGTACTCCAA-TATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAG-ATGCCAAGATGTGAGTTACAACTGCTTTTAGTGTTTTCCTTTGAACAAATTGGTCACTGTTATGTGATATTGCTAAAGACAGGAATTGATTGGCTGGTTTTAAATGACCAGTTTGGATGTCTAAAATCGATTTTTTAATCATTTTGCAGGTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGACTCTGTACATGCAGCAACAATAAAAA-AACAGGTTCTTTTAGAGCTATGGAAGCTAGACTTTTATTGTTTTTTCTCTTCTTAAACCAGCAATAAAGACAAAAAAAAGAATCTAGGTGATTTATTTTTATATGTGTAAGACTTGTGCAGGAGCTACCAGCTACATTTGTTGGTTAGGGGCATATTACTTAGTCGGAAAAACATTGCAGCTCTTTTCGTCATGTCGCTTTCCTTTTGTTTGGTAACTCTTTAATTTTAGCATGTTTAAAACCACAAAATGAAAGGACATTTAGTCCCTTCTACCTTTTCTTAGTTTACGACCACAAGATTCAAAACTCTTCATATCTTAAACTATGTGCCAAGTCGAAACGAGTCAAACAAATTAAAATGGAGGGAGTATTACATTCCTCCCATTTCTCTGCCTTAAATTCCATTTGTAATACCATCTGTTTTGGGCCTACTCCTTGCTCTTAATGGACACGTGTATATACAGACAAAGGCAGACCCGCGTGTGGGAGGAGGTGGGGTGGGGGGTCATGGGATCCTGTTGACTTTAGGAGGAGTCGAGTGTTCAATTTTGTTTTCTTTAAGCCTCAATTTTCTTAACAAAAGAGGCTCAAAAATTTTCAAATGTAATGTTTAGAGCAAGAGTCGATCCTACACCCTTTACAGAGCAAATGAGGTGTTGGAACAAGAATCACTTTGTTAAGCTTTGTCATTTTTGCTTAATATATCCACTTCTTTGTAATCAGGTGGTGTCACATTCAACATGCATTCGACTTCACGGTTGTAACTTTGTTGTTAGTAGTAGGATAAGGAGGTTGTATTTTGAGAACTTTGACAATTAGAGTCTGGAAACTCCGCACTTGATATTTGTTCCCTTAGCAGGAATTACAGTTCTAATTGTTTGACCCAGAATCTGATTGGTTCTGAATTTCTAG-ATTGTTTCTACAAAATGGGTGCCATCATCTACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAGGTAAATGATTTGTTGTTGATGGCTTGAATGCATATTTAGCATCTGGTCTCGTGGAGTTCTGATTGACTAAAAGTTAGTCCTTCACAGGTTTTATATGTGCTTATCCTGTTCTGCTTTTGTCCTTTTTTTGTAATTATTAAAAAATAACTAATTTGGACCAGAACAATATCGGGCGGCTACACTCTCAACCTCAAATGTAATCAAGTCAATCTTTTATCAGCTTCAAGTTGAAGCAAACTATTTGCTGTCTGCTGTCAAATCTAACTCAACTGTTACCTATGGAGTTGGAAATTGTTATAATACCTCTGGCTCTCTTATTTAGCCCAAGTTCTGCCACTTAATATTAAAAAATTGTCAAGTCCTAGTTATATTCTTCTGTTTCTTATATAAATTGGTGTGAGGAACTTCAAGTAAAATCTCTAAGTTTGATGATAACTATCTGAAGCTCATTGCTGCAGTCAAAAGAAAAAATATACTGTAAAAATGCTTTTTACTTTTCAGTACAACCTATATACTGTACTTGTCAGTATACACAAATGTTACCTTCTCAAAAAAATTGATAAAATAAGTATCAAAGCTTATTAATGTTCTCAATAGTCACACTCTTGCTTCCTGTTTGTTATGCAGTTCCACCTCAATCCTGTTCAT</genome_strand>
        <mrna_strand>TGGAGTTGAAGTTTCACTTTTCCATCCAAAAAATTGCAGGAGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTTGTTCCCAAGAATTCCAAATTGAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGATATTTCGACTAAAAAGGAAGAATTGGTATCACAACCCCCTCTAAGAGATCATATAACGAAAAACGGAGAGGCAACGGTTGAGGACGACGTTCCATTGAATGGAGAGACGACGGGAAACGACCTTGCAGAAGAACAAGCCACAATGGAAACTGATAGCGATCGAGATGAAGTTGTCCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCTAATGAG.........................................................................................TTCTATGTACTCCAAGTATCCGTTGAGATCCGAATGGCGTCCCTATGGATTGGATGAAAGAATGCCAAGAC...........................................................................................................................................GTGAGGTTGAGACCTTCAACGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAGAATTTCGACAGAGACTCTGTACATGCAGCAACGATAAAAACAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTTTCTACAAAATGGGTGCCATTATCTACTTGTGCTGACTTTGCTGTTGGGATCCTCATTGGTGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACCTCAATCCTGTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746518" ref_strand="+" ref_description="SGN-E746518 [GI|47104232]">
      <seq>ttcacttttccatccagaaaattgcagagatggatttggacttcgacggtgcaagtaaagtcccgagcaggcaagcccgttttgctcccaagaactccaaattaaagccccaacccaaaagcgaaacactgccattgaaggtagattcagatattccgactaaaaaggaagaatttgtatcacaaccccctctaagagatcatatagtgaaaaacggagaggcaacagttgaggacgacgttcctttgaatggagagactacgggaaacgatcttgcagaagaacaagtcggaatggaaactgatagcgatcaggatgaagttgttcgtgaagttgacgtgtggcttaccccttccgccaatgagttctatgtactccaatatccgttgaggtccgaatggcgtccctatggattggatgaaagatgccaagacgtgaggttgagaccttcatcggcagaaatggaagttgatttggcaatagattttgattctaaaaatttcgacagagactctgtacatgcagcaacaataaaaaaacagattgtttctacaaaatgggtgccatcatctacttgcgctgactttgctgttgggatcttgattggtgataagttccacctcaatcctgttcatgcagttgtacagctccgaccatcactgcagcatcgtaaggaaagtgagttgaagaaccttaccaccagcaatgatgaaaaaagttgtgaaaacgaagacgtcaaggagaaaaagcctgtgggtccgtcaaagaagcagaacaaactacctgggaactacaaggatattggagagcattggttacatctaaaataccatgggactaggagtgacatttcagccagacatcttcagaaaatggccatggagggaggctccccagtaccattttcaatgatcccgagtgattatctgaacgccatttgtcctgcaagaccaactgacattgacagattaagaaatcttagaacaaggttgtctcagaaaccttttgaagaacgtgttagaacttggcttcttgagggacctccaattcatcgttttgatactctaaagcacctagctccagataatcctgttgatgagattctggaagttctcaaaagttgcgcacaattagttcaaggattgtgggttgcaaaaagttcgttagtctatgacacaaacaacggagttgaagttttagcgaggaattttgttctttatgagtttaccaagagtactttaatcaagaagtcagtgtttggcaggaggcctgaattccttaaagctgcgacaccagttctaaaatcattagctgttgagaggcctgacctggatgattggaagctcaaagagcttcctgacaagaaatttgaaaacctttatggtgatgttgttagagagcagcaagctatctgggagtccatggggaaacagatcaatgatattatgcatggaggaagaaacaggcctactttgaagaatcctctaaacccaaaggccaacattcctgcgttgtcaagtagtgataagcccactcctacgacatttttgagaacatctctgtcagaagaaattcgtggagctttaccaaaggcgcttcaaaatgtttttagaatccataaggtttgcagtttgcttcaaatttgcgaactgatggaaaaggaagatccaaagaaagctataatttcacccgcgggtgtttctgatgcacatcaaaaggagatagaggcagtggttaatcagattgctgtaaacatccacggtgtctatgttttgaagtcatcgccagataatccacagtatgatgcattgaggaaagttgtaattgatctttttatggccgaagggtcgactgcaaagctaaagaaagcatctatagttgaagctgccaagttgcaactgggaagggatgttaccactgtggagtttcaaaaggttatgaaggaactatgtcgttcagaaaactcagcgtgggttttgggaagcagtgacagcaatccacaacagtagtctgctatttttgattaagttgtacaggtcatggaaagttcactgctagctgcagaaattctcaatgctgaggagaagttggcttttcttgaagtttcactttactcttgagaggcttaattgttcagttttgaggttaacaggagtctcgcgtatatggttgagctgttgaaacgcttcgcggtgcatttgcaaatctgggatgtcaagccttttttgctcattcttttatcattcaattcattcttttcatgaacgaaaatatagtcagatgtttcttttcaatgtcttgaatatctctgttaaaatgtatgaattgttgcatctctctacttgcagaagaaaatcattcagcatctttgtaccatcagaagaaaaatataagttaaaaagtttgccattcttttaattatatacgtatttgattcactaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="145906" stop="159994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146206" g_stop="146570" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146660" g_stop="146728" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="434" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139">
            <donor d_prob="0.985" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="146868" g_stop="146975" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="542" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="146976" i_stop="147882" i_length="907">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.665" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="147883" g_stop="147954" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="614" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="147955" i_stop="148581" i_length="627">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="148582" g_stop="148740" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="773" r_length="159" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="148741" i_stop="149333" i_length="593">
            <donor d_prob="0.962" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="149334" g_stop="149369" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="809" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="149370" i_stop="149624" i_length="255">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="149625" g_stop="149731" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="810" r_stop="916" r_length="107" r_score="0.981"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="149732" i_stop="150741" i_length="1010">
            <donor d_prob="0.889" d_score="0.96"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="150742" g_stop="150813" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="917" r_stop="988" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="150814" i_stop="153172" i_length="2359">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="153173" g_stop="153221" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="989" r_stop="1037" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="153222" i_stop="153353" i_length="132">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="153354" g_stop="153946" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1038" r_stop="1630" r_length="593" r_score="0.983"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="153947" i_stop="155208" i_length="1262">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="155209" g_stop="155391" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1631" r_stop="1813" r_length="183" r_score="0.978"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="155392" i_stop="155464" i_length="73">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="155465" g_stop="155585" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1814" r_stop="1934" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="155586" i_stop="159161" i_length="3576">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="159162" g_stop="159694" g_length="533"/>
          <reference_exon_boundary r_type="cDNA" r_start="1935" r_stop="2442" r_length="508" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2443" polyA_stop="2455"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E746518" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>2467</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146206" e_stop="146570"/>
          <exon e_start="146660" e_stop="146728"/>
          <exon e_start="146868" e_stop="146975"/>
          <exon e_start="147883" e_stop="147954"/>
          <exon e_start="148582" e_stop="148740"/>
          <exon e_start="149334" e_stop="149369"/>
          <exon e_start="149625" e_stop="149731"/>
          <exon e_start="150742" e_stop="150813"/>
          <exon e_start="153173" e_stop="153221"/>
          <exon e_start="153354" e_stop="153946"/>
          <exon e_start="155209" e_stop="155391"/>
          <exon e_start="155465" e_stop="155585"/>
          <exon e_start="159162" e_stop="159694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTTTTCCATCCAGAAAATTGCAGTGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGGTAGATTTTCTTGATTCAATATACGTCTGTTTTATTGTTGAATTTGCAAATTTTTCTATTTGTGAAGTATATTTTCTTTTCTTTTTCAGTTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGTTACAACTGCTTTTAGTGTTTTCCTTTGAACAAATTGGTCACTGTTATGTGATATTGCTAAAGACAGGAATTGATTGGCTGGTTTTAAATGACCAGTTTGGATGTCTAAAATCGATTTTTTAATCATTTTGCAGGTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGACTCTGTACATGCAGCAACAATAAAAAAACAGGTTCTTTTAGAGCTATGGAAGCTAGACTTTTATTGTTTTTTCTCTTCTTAAACCAGCAATAAAGACAAAAAAAAGAATCTAGGTGATTTATTTTTATATGTGTAAGACTTGTGCAGGAGCTACCAGCTACATTTGTTGGTTAGGGGCATATTACTTAGTCGGAAAAACATTGCAGCTCTTTTCGTCATGTCGCTTTCCTTTTGTTTGGTAACTCTTTAATTTTAGCATGTTTAAAACCACAAAATGAAAGGACATTTAGTCCCTTCTACCTTTTCTTAGTTTACGACCACAAGATTCAAAACTCTTCATATCTTAAACTATGTGCCAAGTCGAAACGAGTCAAACAAATTAAAATGGAGGGAGTATTACATTCCTCCCATTTCTCTGCCTTAAATTCCATTTGTAATACCATCTGTTTTGGGCCTACTCCTTGCTCTTAATGGACACGTGTATATACAGACAAAGGCAGACCCGCGTGTGGGAGGAGGTGGGGTGGGGGGTCATGGGATCCTGTTGACTTTAGGAGGAGTCGAGTGTTCAATTTTGTTTTCTTTAAGCCTCAATTTTCTTAACAAAAGAGGCTCAAAAATTTTCAAATGTAATGTTTAGAGCAAGAGTCGATCCTACACCCTTTACAGAGCAAATGAGGTGTTGGAACAAGAATCACTTTGTTAAGCTTTGTCATTTTTGCTTAATATATCCACTTCTTTGTAATCAGGTGGTGTCACATTCAACATGCATTCGACTTCACGGTTGTAACTTTGTTGTTAGTAGTAGGATAAGGAGGTTGTATTTTGAGAACTTTGACAATTAGAGTCTGGAAACTCCGCACTTGATATTTGTTCCCTTAGCAGGAATTACAGTTCTAATTGTTTGACCCAGAATCTGATTGGTTCTGAATTTCTAGATTGTTTCTACAAAATGGGTGCCATCATCTACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAGGTAAATGATTTGTTGTTGATGGCTTGAATGCATATTTAGCATCTGGTCTCGTGGAGTTCTGATTGACTAAAAGTTAGTCCTTCACAGGTTTTATATGTGCTTATCCTGTTCTGCTTTTGTCCTTTTTTTGTAATTATTAAAAAATAACTAATTTGGACCAGAACAATATCGGGCGGCTACACTCTCAACCTCAAATGTAATCAAGTCAATCTTTTATCAGCTTCAAGTTGAAGCAAACTATTTGCTGTCTGCTGTCAAATCTAACTCAACTGTTACCTATGGAGTTGGAAATTGTTATAATACCTCTGGCTCTCTTATTTAGCCCAAGTTCTGCCACTTAATATTAAAAAATTGTCAAGTCCTAGTTATATTCTTCTGTTTCTTATATAAATTGGTGTGAGGAACTTCAAGTAAAATCTCTAAGTTTGATGATAACTATCTGAAGCTCATTGCTGCAGTCAAAAGAAAAAATATACTGTAAAAATGCTTTTTACTTTTCAGTACAACCTATATACTGTACTTGTCAGTATACACAAATGTTACCTTCTCAAAAAAATTGATAAAATAAGTATCAAAGCTTATTAATGTTCTCAATAGTCACACTCTTGCTTCCTGTTTGTTATGCAGTTCCACCTCAATCCTGTTCATGCAATTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAGAACCTTACCACCAGCAATGATGAAAAAAGTTGTGAAAACGAAGACGTCAAGGAGAAAAAGCCTGTGGGTCTGTCAAAGAAGCAGGTTCATTCATGATTTGCTATTTGATGCCAGCTTCTAAGCTCAACTTATATGAACCTTGTATACAGTTACCTTTCATGTGATATTATGGTACATATCAGTGGCTAGCACTTAAAATATCATATGTCAAGGCTTTTCCCCTTCTCCGGTTAACTTCATTTTTTGAACCGAGGGTTTATCGGAAACGATCTCTCTACCCCACAAAGGTAGGGGTAAGATCTGTATACATCTTAGTTCTTACCGTCCCAAACCACACTTGGGGGATTACACTGGGGGATGTAGTTGTAGTATGTTAAGGACTTCTTTGTTCCTGATTTACTAGCTTTGCCACAATTTTGGATAAATAATGATAAAAGGAATACCTAAAGATAAGTCTTCTATGGTTAAGCACTTTCTGCTATTTTCAAGACTTCTTGTCTAGAATGGTGAACTTCACAATCTTACCCAGGACTCAGGAGCCCAGTATCTGCCTTCCCAGTTTGCCTCACTTGGTGACCTGATTCAACCCTATCCCTCCCCTGATGCTGTTCAAACTTTTCGTATAAGTGCTTTACCTTTTCTTTGATCTATTCTTGAAACACGTATCCTTTGTGCAGAACAAACTACCTGGGAACTACAAGGATATTGGAGAGGTATGAACACCTGTTAACATGACAAAATTTCCGCTTTTCAGTATTAGCTAATAACTCTTCATAATGTTCATTTGCTTGAGTGGCTGCCGTTTTTTCGTCTACAATTTTGGATTTGACGTTTCTGTTGCAAGTGTTTTCTATTTATTTGTACTCAAGAGCAGTTAACTTTCTCCATGCAGTTGCCAATATCATTTCAAACAGTTTCATTAATGCGGATCCTTGACTTATTGATATCTGTTTCATTTCCTGTTTTAGCATTGGTTACATCTAAAATACCATGGGACTAGGAGTGACATTTCAGCCAGACATCTTCAAAAAATGGCTATGGAGGGAGGCTCCCCAGTACCATTTTCAATGATCCCGTATGTATCTGCTAATATGGTTGATTTTTCTTCGCTTGAGCCATATATATTTTTTGCAAACTGCTTCTGTTCTGGACAATTAAAAGATACATTTCCTGCCTCAGAGCATACATTTATCTACTCTCATTCTTCTATGATGAACTAAGGGTAATTCACTAAAAAGCATCCAGAAGATGCAAGCAGAAAATTACAAGAGAGGGAGATAGTGTCTGCTCGTATCCTCATACCACTACATACCCAGTGTTATCCCACAGAGATAGTGTCTGCTCATAGCCTCATACCACTGCATACCCAGTGTTTTCTCGCAGAGATAGTGCCTGCTCATAGACACACTAAAACACTATTCTATCACTAAGGAGTAGTGAACAACAACACACCCAGTGTAGACCAAAAATTGAACACAACTAGTTACAGGGGCCTGATTGAGCCAACTATTACAAAAACAAATTCAGTAAGTATTTTGCTTTGAGTACACGAGTAGGAGTTGAAATCCCACAAAACATCTATGATTCCATTCATTCCCCATGTACCAAAAAATAGCAGCAGAGACTGTTTCCTAAACACCAGCTTTCATACGCTTCTTGATGCTGTAAGGCTTGACCCAAGCTAGTCAACAACAACAACAACAAATCCAGTGTAATCCCAGAAGTGTTGTCTGGGAGGGTAGTGGGTACTCAAACCTTACACCCCTACCTTGAGAATATTGACTGTTTTCGATAGGACCTTTTGCTCCAAAAGATATGTAAAAGAAGTCAAAACAACAGCAAGATAACACAATAATCTAAGAATATTAAAATACATGAATGATACTACTGCGGGAATAATATCTACTAACCTTCTACTCTAATTGACCCAGGCTAGTGCAAGAATAGAAAAGAACATGCTCCAAATATCATATGCTACTGAACGATGCAAAAAAAAGATTTCTTAACACTTTCAGAATCCAAATTGCACATCTACTCTCATTTTTATTCTAATACCAGTTTTCTTCCTGCAAATTTGATACACAGGAGTGATTATCTGAATGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAGGTACTGCAGACACTTTAGTTGGTCCTTCACATCTATTGTTTTGACATTGAAAGGTCTGGAGGTGCTGCTAAAGACAAAAAGAAAATTTTATTTACATCTATGATCGTAGAGCTGTCTTCTTCTTTGATATGTGGCGTAATCATCCTCTAGTATTGTTGGACCATTCAACTAACTGCAAATTATCATCTTCTTTTTCAAAGAAATCACATATTACTGTAATCTGTTTCCTTATCTCCCCCTTCCACTTTATTTATTTAATTAGTTAATCTCTTTTTGCTTTCTGTACAATGTTAAGATGAGATTTTGATGATCTTTGATTACTTGTTGATAATCTAGTTTTTAGTTAGCAATTGACTCGTCTTTGGTTGATGGACTGGTAATTTCCTACAGTGTCAGAGATTAGATTCACATAGTAGCTTAAGCCTAGGCACAACGTCAATGGATGTAATTCTGATTGACTAAATTTGTAGATCAAATTGGGAAGGAGAACGTTTTTCTGAGATGGGGAAAAATCTCTCTAGTGGCGGATCCAGATTTTTTCACTACAAGGGTTCAAAAAATGAAAATGTAGTACTTGAGATTTGAACTTGGAACCTCATGGTGAATTTTGAACCCCCTCAGCCAACGTCATCTTATATTTAGGAGGTTCAAAATCTCTATATGTACACAAAAATTTAAAAATATCCAAATGGTGTCATTTTTAGTCGAGGGTTTGGGTGAACCCTCTAGATCCACCTTGACATGAATGCTTCTGCTGGCTTGGACTCAGGGGAGAAAGGAGAATTTCACTAACAGATCAAGTTCAACAAAATATTGTGGAGGGGATTTCTAAAAATGCAGCATTGGGAGGTTTAGCTAATCTTTGACGATGTGTGATGTTGGATCAAATAATATTTTGGGGGGAAAATTAGTAGAGAATGTGAACACAAGAAAATACTGGAAGCTATTAGGTGCTCAAACTCTAAGGTCCAGTCTGTCCCCCCACCCCTCACCCCACCCCCACCCATTTTGATGGTTGAACTTGGTCTATATTTCGGTCAAGTACATATTGGTGTTCCCTCTAAGGTGTGCTTTAGAAACAATCTAGATTCTGAATTCTCTCAGTATTGCATATGTCAGTCAAAAGTTGGAAAAAAGTCTCCAGTCTGCTGGGGCTATGAAGATTTTGATACTAACACCATGAAGTGGTAGGCTAAGCAGGAAAAGGAGAGAACTCAGACTTGAATTGCGAGGCAAAATTAAAGCGTGCATTTTACTGAAGAAAACTGAATCAAGACCATAAAAATTTAAAAAAGTTATACTTGTAAAGATAAATTAACTATAAACACAAACAACTATATGGACAAATCAAAGCAGACAGGTGTCCTGACTTTGAGCTTCACAACCACCATTACGAAAAAAATTCCTCGTGCTTGACCCATGGAAAAGAATAAGACTTGCATGTTTGGGGTGTGTTGTAAGCACGACTAAATAAATAAGAGTATGCTCTGTTAATCCGCCTCAACTTTTAGATGAGGTGTTCACTCACTCCAACATCTATTTTTATAGTATATGCAGGAAGCATTGTTGTCCCCGGTTTATAAAAAAATGTGTTACGGAATTAATTTTGGCATTGTGGTGGTAGGTGGGGGTGGGGGAGGGGGAGAGGGAGAGTAGGTTAAAGGCTTAAAGCTTTGTTGCTTTCTTGGTTTGTCATTGTAATAAATATGAGCTGTATGAAATGCAAGTTTACATTATGCTTTGTTTGCTAGAGAACCTAATCTTCCAGAAAGTAGTTTTTGTTCTCGATGTTCTAGCAATGAAATAAATAAGAAAACATGGTCTTGCTTCTTTCTAGTTTTGGAGTGATTGGCAGATCTACAAAAATCTTCGGGGCATTTTTATGTGATAAATCTTATTTCCATTTCTTTTGTTCATCACTTCTTGAGGCCGAGGACGGGAGTGGACTGTTGTTCCAGAATATGCTGTTGGATACATTTTCACCATGTTACTTGGCCAAACTTGCACCTCACTGGTCATCTTATCCTTGGTGTTCTACCTTTGTCATCTATCAAATTGATTTCTTTTCATTTAAAAAGAACTTTGTTCTAAATAGCCATCAGTTGTTAAAGTTGATTCCTTGGAATTAATTATTATTGACTGGTGTGACTTGTATTCATTCTAGGTGTGCTGGTGTAGTAAAATATAAATATGCAGTTTCTCTAGCCAGAAGTTTGCTGTTTCTTCCATTCAGTATCCAAGCCATGTAGAATAGATATCAGTACTGGATATGCCATATTTCTCAATTATGTTAAATTAGCATTCTTTCCCAGTCATTTTATGCTCCTAACTTGTAAATTGCCAAATGGATGGTTTTCAGGTTGTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAGGTTTGTACCTACTATTTGGATTTTGCACTGCTTATATTTTTATGCCTGCAAGGCTGCAACAAAGTTTGTTTAGATGGCCCCATGGTGCTTATAACTCAGCACATTTCTAAATATGAATTCTTTTCGCAACAGGGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAAGTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCATTAGTCTATGACACAAACAATGGAGTCGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAAGAGTACTTTAATTAAGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCTGCGACACCAGTTCTAAAATCATTAGCTGTTGAGAGGCCTGACCTGGATGATTGGAAGCTCAAAGAGCTTCCTGACAAGAAATTCGAAAACCTCTATGGTGATGTTGTAAGAGAGCAGGAAGCTATCTGGGAGTCCATGGGGAAACAGATCAATGATATTATGCATGGAGGAAGAAACAGGCCTACTTTGAAGAATCCTCTAAACCCAAAGGCCAACATTCCTGCGTTGTCAAGTAGTGATAAGCCCACTCCTACGACATTTTTGAGAACATCTCTGTCAGAAGAAATTCGTGGAGCTTTACCTAAGGCGCTTCAAAATGTTTTTAGAATCCATAAGGTTTGCAGGTGAGGTCTCTGAAAATGACTTATGAACTTTCTGCCTTTGCTGTTTATTATATAGTTAAACGTAATTTTAGGTATTCATAATTGTTAGAGCATGCAGAAACCTGGGTCAAGCAGGTGGTTTATTGACCTTGGTTTGATTGCTCAACATTTTTACAATTATTTTGGGGCTTTTTAAAATAGCTATTCTCCCTTTAACTTCTGCCACCTGTTGTCCTCCCTTTCTGTTTGGGTCAAGAACCCTCACCTTTTTGTGGGTAAACTGTAAGTTACCTCTTTATTCAATTCTTCCTGATTTCACCCTCCATTTATTTGATTGTTTCATCCTTTCTTTTCTTTTTCTTTTGATGAAGTAAGAGAATTTCATAGATGGCATCAAGAAGATGCAGAGATTACGAAAGTAAGTAGATACTCAAAAGGTTATCAGCCATAGCCGCTACAAAACTAAGCTAATGCACTCTTAGACTACAACTCTAACCAATCGACATGATTAGACTTCTCCGGCGACTCCAAAGTCCAACCAATACGTATTTCTTCTTCCTCTGTTTCTTTTTTCTTTCATCTTCTTTAGACTTCAAAGTTCTTCTACCTCTGTTTTTTTCTCTGTTGGGACTTCTGTTCTGTTTTTTTCTTATTCAAGTTCTAGACTTTTTTAGTATGTACTATCTATTTTTAGTTTTTGAATTAAAATATTTGCTAATATGCTATTGCTATTGAGATTTTGATTATTTATATATGCAATTAAATATCTTAATTTTTTTATATTTATTGGCGCCATACTTCAAAAGGCGAGTGCCCTTGCCTTGTTGCGGGCCAGACCCGTTTCGCCCTTCACTGACCAAAACACTGGTATGATCAGTCTTCTGAAAAGATGAGATGGTCTAGTTATAGGACATTTCTTTTTGCTTTGGAATGTTTTGATACCTTTGAGCAGTGGTATCACTCAGAGTCCTGTTTATATTGACTTATTGTTAGAGGTGAGCTGTGCGAGGATTTAGGTCGAAATTGTCCATCGCAAGATTTATGTTGCCTTTTCAGTATGTTGTATATCTACTTTACCTTTCTCGAATGGTAATGTATCATAACATAGAATATACAACATTGTCTTTTTCCTGTGCTCCTCATCTGTCTGAGATTTAGAAGGAACAGAGTAATTTCGTTGTTCAAGAAAAAAAACAAACTGTGCACTACTTGTTTTATTTACCTGATCCATCTAAACTTGTGACCCCTAACCAATTTAGAATCTACTGTTTACTTTTTGCCAGTTTGCTTCAAATTTGCGAACTGATGGAAAAGGAAGATCCAATGAAAGCTATAATTTCACCCGCGGGTATTTCTGATGCACTTCGAAAGGAGATAGAGGCAGTGGTTAATCAGATTGCTGTAAACATCCACGGTGTCTATGTTTTGAAGTCATCGCCAGATAATCCACAGTATGATGCATTGAGGTTAGTAACTATTGCTATATAACTAACACTTAAACACCTTGCTCCGTGGCTAATACATAGTTTTTGTTCTCAGGAAAGTTGTAATTGATCTTTTTATGGCCGAAGGGTCGAATGCAAAGCTAAAGAAAGCATCTATAGTTGAAGCTGCCAAGTTGCAACTGGGAAGGGATGTCACCACTGTGGAGTTTCAAAAGGTGAGTACTTTTCTTACTTGTCATGAGAATTAAGTTATATCTTCTTTGACTTTATTGTATGGGGTTTCAGGTAGTGGCAGAAGTCAATAATTGAACAGTTTTTTTAATCATAGTTGATGCAGCGATTTCGATTAGTCAATCAATCAAATATGCCTACTTCGGGTTATTTAAATACTTGTAAGAAATTTGTCTTGAGGGCATATTTTAGGGGTCTCAAAAAATAGAGGTTCTCTATATCTCAAACTTGTATGTACTCGAACCTAATGTATGTGTAGCTACAACCATGAAAGCTTAGTACAAGTAGTTCTGTAGTTGTATTCTATCTAACCAAGTCCACATTAACTCCAATTGATTTTAGGTCTTTGATCCACCTCCAAATAATTTTAGGTCTATTTCATCTTTTTAACACTTTCAATCACTAGAATGCACATATGAACTGGTAACTTTCATGGTAAAGAAGCGTTTCAATGTTTCATGGACTTGCAAGTAATGGGATGTCGATGGAGGTTTTGTTGGATTTGGTCCTATAGATTGGTGAGACTTGACCCTCAGATAACCCCCAAGAAAGATTGTTTCAAGTACATTGGGTCTCTAATCCAGGGAAGCTGAGACATTGATGATGATATCATACATCGTATTAGTGGGCGTGAATGAAGTGTAGGCTTGCATTCAGAGTCTTTATGATAAAATGGTATCATCAAAACTTAGAGATAAGTTTTATAAAATGATGGTTAGACCGACTTTGTTGTATGAAGCAGAGTCCTAACCAATCAAGAACTCCCATGTTCAAAAGATGCATATCGCGGAAATGAGGATGTTGATCAAGAACTCCCATGTTCAAAAGATGCATATCGCGGAAATGAGGATGTTGAGGTGGATATGTGGGCACATATGGAGCGATAAGATCTTGAATGAGGATTTTTAAGATAAGGGGGGAGTGGACTTCGTGGTGGAAAAGATATGAGGGAGGCGAGATGAAATGGTTTAGACATGTGTAGAGGAGATGCGAAGATGCTCCAATAAGGAGGTGCAAGAGGTTGATTATAGTAGGGTACGAAGAGAGGTAGAAGTAGACTGAAAAAGTATTACGGAGAGCTAATTAGACAGGATATGACTCAACTTCGGGTTATTGAGGAAATGGCCTTAAGAGTTAAGATAAAAGGGTGTGGAGGACGCGTACTAGGGTAGATGGTTAGTAACCAGGAGTGTTGTCTTGCTTTTCGAGGGTTTTAGGTGTGTTGGTGTTTGTCCTCATACTGATTGTATTATTGTAGTTCTTGCTTTTGATATCTATCATAATTTGTTGTTTAATGTGTTTCGGTTAGAGCATTATTTTGTTCTTGTTCCTTTCTTGTAGGATTTGCACTGCTTCCTTGTTAGTTCTATGTTTTCCCCTCCACTGCTTTCTTACTCTTTGTTTGGATTTACTAAATTTGAGCCGAAAGTCTTTCAAAAAGCAGCCTTTCTACCTCCATGAGGTAGCGATTAGGTCAGTGTACACTCTATCCTCCATAGAACCCTTTTGTGGGATTCAGTGGGTATATTGTTGTTGTTGTCTGCTAGTTAAAAAGAATTTCCTTTTTAATTTTCCATTGAGTTTCAAGAACTGTTATTTTCTTTTTTCCCCTTCTTTTTATTATTATTGGATCTATGGTTTGGAAAGTTTTAATTTAGGGTGTGTGTTCGTTACAAAGGGAAATGCTTTTTTGAAAAAAGTCAGTTTCTTATTTTTCCGTGTTTTTAGTATTTAAGCAAAACATATTATTTTAAAAACATTTTTACATACTCTAGATAGTGAAATACTATGGAGATGGGGTTGTAGGTGTGGTGGGGATGGGGATGGGGCTAAGAGGGATGGGGTGAAGATGAGGTGTGTTGTGGAGGGTAGGGGAGATTAAATCAATGTGAAATCCCACTTTTAGAACTTGTTTTCCCTACTTTCCACTAGGCAAGTCATTTTCCTCATTTTTTTTCCACGAAGTTCCTCATTTTCAAGGAACTTGTTTTCCTAGAGAAAATGATCTCCAATTTTTTTAACCAACTGTACAGGGGAAAATGAGGAAACATATTCTGGGTCTTGTTTTCGTCCATTCCGGACACACCCTTATGTTCAAATTAATGACTGTCTTTTTCAAATTACTACAGGTAACAGAAAAAAATTGATTACGACAAATGTGAAAGTTCACCACAGACCAAGCTAATCATGTAGAGAAAACTGTGCATGATATTTTTTTTCATGGAACTGCTCTGTGTTTTAGCTATCAACGTAATCCTAGAATAGGAAATGATCTTCGGCACTGTTTTATGCAAACTGCTCATTTGTTATAAAATTAAGCCGATCAGACCTTTTTTAAAAAATAATAATTTTGAAGACCAAGTTAAGGTGGAATGCAGTATGTTTTAATCTCTTCTCCACCCCTCCTAGTACCATTTACCCCTCATATTTTTATGACTTGCAGCAGTGGTGATTTTGCACATTCAGATAACTAGAGACCAGAGAGAACAATATAAAAAAGGAAATGGAAGTGTAATCACCTATCTGTTTAGTATGTGCAAAGAAGAGAAAGAGACAGTCTCCAATCAGCTTTTTATTGAGGAGTGAGTGGAGAAAATTGTTTCCCAGTAGGTCTCGTAAAACAATGGCTAGACAAGTAACAAACCTCTTATCTATCCCAAGCTAGCTCTCATAGCTCCCCTGATTTTAAACAGTACATGTTTCTACTTTTGGGTAAACCACTAAAAACTTGTTATAAAATTACTTTAAGAAATTTAAATTTTGTAAGTTTTATATTGGAACTTCACCCTTCATCGCAGATGTTTCTGACCTTTAAATTGGGGTGTTATTATTTCATGCCTTAGTCCTGTTTGAATGTTTAGAGATGATCAAAGACATTTTCTGGAGTACGATAAAAGTTGGCAATTCTGCCTGACTATGCCAAATGAGTTGGAGATATCACTGCAAAAGAAACAAAAATGGCAAAGTTAACACTAGCATTTGACAGGATGCATTTCTTATCCTCTTTTGTATGGTGTGGTGATGTTTCTACCTCAGGCTTTGTTTTTTCTCCTGGCCTCCTGTCAGGTTTCTCTGTATTGCTCTTCTTTTATGTAAATTGGATCCAAGCAACTCTGTCATGATCCTGCTTATGTGCTGACACAGGCGGCTTGGCCTTGGAAAGTTATTGGGATTTAAATAACTTGGACATACGTGCACTATATTATGAAGTTGATCTATTTACCAGCACATGCAGATGTATCCGATAGATGTTTGCAGTATCCTGTTTCCGATCCTCTTATCCCAGTTCCCCATTATTTTTTTCCTTTTCTGATAGAATATAAAATGTGACAGTTCCAAACTTCCATGTCATCTGACTCTATACTACACCTATTGTGGTCTAGAATCTTTCAAGTTGCCTGGAACTTTGTATTGTGAAATATTGGCGTTTTGTCATATTGCAGTGAATTTTAAAAAATTCGTGCAGAAGCTTCATTTCTTTTGTCTAATTCCTGATGGAAAAATATAGAAAATCTTTTCTTGACGACATGAATCCTATATATTTTTCTATGCTTGTGCAGGTTATGAAGGAACTATGTCGTTCAGAAAACTCAGCATGGGTTTTGGGAATCAGTGACAGCAATCCACAACAGTAGTCTGCTATTTTTGATTAAGTCGTACAGGTCATGGGAAGTTCACTGCTAGCTGCAGAAATTCTCAATGCTGAGGAGAAGTTGGCTTTTCTTGAAGTTCCACTTTACTCTTGAGAGTCATAATTGTTCAGTTTTGAGGTTAACACGGAGTCTCGCGTATATGGTTGAGCTGTTGATACGCTTCGCGGTGCATTTGCAAATCTGGGAGAAAATTTAGTTAGGATTAGCAGATGTCAAGCCTTTTTTGCTCATTCTTTTATCATTCAATTTATTCTTTTCATGAACGAAAATATAGTCAGATGTTTCTTTTCAATGTCTTGAATATCTCTGTTAAAATGTATGAATTGTTGCATCTCTTTACTTGCAGAAGAAAATCATTCAGCATATTTGTACCATCAGAAGAAAAATACAAGTTAAAAAGTTTGCCGTTCTTGTAATTATATACGTATTTGATTCACCAA</genome_strand>
        <mrna_strand>TTCACTTTTCCATCCAGAAAATTGCAGAGATGGATTTGGACTTCGACGGTGCAAGTAAAGTCCCGAGCAGGCAAGCCCGTTTTGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGCGAAACACTGCCATTGAAGGTAGATTCAGATATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAACAGTTGAGGACGACGTTCCTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAG.........................................................................................TTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGATTGGATGAAAGATGCCAAGAC...........................................................................................................................................GTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGACTCTGTACATGCAGCAACAATAAAAAAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTCTACAAAATGGGTGCCATCATCTACTTGCGCTGACTTTGCTGTTGGGATCTTGATTGGTGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCACCTCAATCCTGTTCATGCAGTTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAGAACCTTACCACCAGCAATGATGAAAAAAGTTGTGAAAACGAAGACGTCAAGGAGAAAAAGCCTGTGGGTCCGTCAAAGAAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTACCTGGGAACTACAAGGATATTGGAGAG...............................................................................................................................................................................................................................................................CATTGGTTACATCTAAAATACCATGGGACTAGGAGTGACATTTCAGCCAGACATCTTCAGAAAATGGCCATGGAGGGAGGCTCCCCAGTACCATTTTCAATGATCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATTATCTGAACGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAG....................................................................................................................................GGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTCTGGAAGTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCGTTAGTCTATGACACAAACAACGGAGTTGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAAGAGTACTTTAATCAAGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCTGCGACACCAGTTCTAAAATCATTAGCTGTTGAGAGGCCTGACCTGGATGATTGGAAGCTCAAAGAGCTTCCTGACAAGAAATTTGAAAACCTTTATGGTGATGTTGTTAGAGAGCAGCAAGCTATCTGGGAGTCCATGGGGAAACAGATCAATGATATTATGCATGGAGGAAGAAACAGGCCTACTTTGAAGAATCCTCTAAACCCAAAGGCCAACATTCCTGCGTTGTCAAGTAGTGATAAGCCCACTCCTACGACATTTTTGAGAACATCTCTGTCAGAAGAAATTCGTGGAGCTTTACCAAAGGCGCTTCAAAATGTTTTTAGAATCCATAAGGTTTGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTTCAAATTTGCGAACTGATGGAAAAGGAAGATCCAAAGAAAGCTATAATTTCACCCGCGGGTGTTTCTGATGCACATCAAAAGGAGATAGAGGCAGTGGTTAATCAGATTGCTGTAAACATCCACGGTGTCTATGTTTTGAAGTCATCGCCAGATAATCCACAGTATGATGCATTGAG.........................................................................GAAAGTTGTAATTGATCTTTTTATGGCCGAAGGGTCGACTGCAAAGCTAAAGAAAGCATCTATAGTTGAAGCTGCCAAGTTGCAACTGGGAAGGGATGTTACCACTGTGGAGTTTCAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGAAGGAACTATGTCGTTCAGAAAACTCAGCGTGGGTTTTGGGAAGCAGTGACAGCAATCCACAACAGTAGTCTGCTATTTTTGATTAAGTTGTACAGGTCATGGAAAGTTCACTGCTAGCTGCAGAAATTCTCAATGCTGAGGAGAAGTTGGCTTTTCTTGAAGTTTCACTTTACTCTTGAGAGGCTTAATTGTTCAGTTTTGAGGTTAACA-GGAGTCTCGCGTATATGGTTGAGCTGTTGAAACGCTTCGCGGTGCATTTGCAAATC----------------T--G----G--GATGTCAAGCCTTTTTTGCTCATTCTTTTATCATTCAATTCATTCTTTTCATGAACGAAAATATAGTCAGATGTTTCTTTTCAATGTCTTGAATATCTCTGTTAAAATGTATGAATTGTTGCATCTCTCTACTTGCAGAAGAAAATCATTCAGCATCTTTGTACCATCAGAAGAAAAATATAAGTTAAAAAGTTTGCCATTCTTTTAATTATATACGTATTTGATTCACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E417761" ref_strand="+" ref_description="SGN-E417761 [STM-26-E13]">
      <seq>ttcactattccatccaaaaaattgcagagatggatttggacttcgacggcccaagtaaagtcccgaacaggcaagctcgtttcgctcccaagaattccaaattgaagccccaacccaaaagtgaaacactgccattgaaggtagattcagatatttcgactaaaaaggaagaattgctatctcaacccccactaagagatcatatagggaaaaacggagaggcaacggttgaggacaacgttccattgaatggagatactacgggaaacgaccttgcagaagaacaagtcacaatggaaactgatagcgatcgagatgaagttgtccgtgaagttgacgtgtggcttaccccttccgccaatgagttctatgtactccaatatccgttgagatccgaatggcgtccctatggattggatgaaaaatgccaagacgtgaggttgagaccttcaacggcagaaatggaagttgatttggcaatagattttgattctatgaatttcgacagagactctgtacatgcagcaacgataaaaaagcagattgtttctacaaaatgggtgccattatctacttgtgctgactttgctgttgggatcctcattggtgataagttacacctcaatcctgttcatgcagttgtacagctccgaccatcactgcagcatcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="145906" stop="148938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146206" g_stop="146570" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146660" g_stop="146728" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="434" r_length="69" r_score="0.942"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139">
            <donor d_prob="0.985" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="146868" g_stop="146975" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="542" r_length="108" r_score="0.954"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="146976" i_stop="147882" i_length="907">
            <donor d_prob="0.982" d_score="0.92"/>
            <acceptor a_prob="0.665" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="147883" g_stop="147954" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="614" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="147955" i_stop="148581" i_length="627">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="148582" g_stop="148638" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="671" r_length="57" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E417761" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E417761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146206" e_stop="146570"/>
          <exon e_start="146660" e_stop="146728"/>
          <exon e_start="146868" e_stop="146975"/>
          <exon e_start="147883" e_stop="147954"/>
          <exon e_start="148582" e_stop="148638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTTTTCCATCCAGAAAATTGCAGTGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGGTAGATTTTCTTGATTCAATATACGTCTGTTTTATTGTTGAATTTGCAAATTTTTCTATTTGTGAAGTATATTTTCTTTTCTTTTTCAGTTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGTTACAACTGCTTTTAGTGTTTTCCTTTGAACAAATTGGTCACTGTTATGTGATATTGCTAAAGACAGGAATTGATTGGCTGGTTTTAAATGACCAGTTTGGATGTCTAAAATCGATTTTTTAATCATTTTGCAGGTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGACTCTGTACATGCAGCAACAATAAAAAAACAGGTTCTTTTAGAGCTATGGAAGCTAGACTTTTATTGTTTTTTCTCTTCTTAAACCAGCAATAAAGACAAAAAAAAGAATCTAGGTGATTTATTTTTATATGTGTAAGACTTGTGCAGGAGCTACCAGCTACATTTGTTGGTTAGGGGCATATTACTTAGTCGGAAAAACATTGCAGCTCTTTTCGTCATGTCGCTTTCCTTTTGTTTGGTAACTCTTTAATTTTAGCATGTTTAAAACCACAAAATGAAAGGACATTTAGTCCCTTCTACCTTTTCTTAGTTTACGACCACAAGATTCAAAACTCTTCATATCTTAAACTATGTGCCAAGTCGAAACGAGTCAAACAAATTAAAATGGAGGGAGTATTACATTCCTCCCATTTCTCTGCCTTAAATTCCATTTGTAATACCATCTGTTTTGGGCCTACTCCTTGCTCTTAATGGACACGTGTATATACAGACAAAGGCAGACCCGCGTGTGGGAGGAGGTGGGGTGGGGGGTCATGGGATCCTGTTGACTTTAGGAGGAGTCGAGTGTTCAATTTTGTTTTCTTTAAGCCTCAATTTTCTTAACAAAAGAGGCTCAAAAATTTTCAAATGTAATGTTTAGAGCAAGAGTCGATCCTACACCCTTTACAGAGCAAATGAGGTGTTGGAACAAGAATCACTTTGTTAAGCTTTGTCATTTTTGCTTAATATATCCACTTCTTTGTAATCAGGTGGTGTCACATTCAACATGCATTCGACTTCACGGTTGTAACTTTGTTGTTAGTAGTAGGATAAGGAGGTTGTATTTTGAGAACTTTGACAATTAGAGTCTGGAAACTCCGCACTTGATATTTGTTCCCTTAGCAGGAATTACAGTTCTAATTGTTTGACCCAGAATCTGATTGGTTCTGAATTTCTAGATTGTTTCTACAAAATGGGTGCCATCATCTACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAGGTAAATGATTTGTTGTTGATGGCTTGAATGCATATTTAGCATCTGGTCTCGTGGAGTTCTGATTGACTAAAAGTTAGTCCTTCACAGGTTTTATATGTGCTTATCCTGTTCTGCTTTTGTCCTTTTTTTGTAATTATTAAAAAATAACTAATTTGGACCAGAACAATATCGGGCGGCTACACTCTCAACCTCAAATGTAATCAAGTCAATCTTTTATCAGCTTCAAGTTGAAGCAAACTATTTGCTGTCTGCTGTCAAATCTAACTCAACTGTTACCTATGGAGTTGGAAATTGTTATAATACCTCTGGCTCTCTTATTTAGCCCAAGTTCTGCCACTTAATATTAAAAAATTGTCAAGTCCTAGTTATATTCTTCTGTTTCTTATATAAATTGGTGTGAGGAACTTCAAGTAAAATCTCTAAGTTTGATGATAACTATCTGAAGCTCATTGCTGCAGTCAAAAGAAAAAATATACTGTAAAAATGCTTTTTACTTTTCAGTACAACCTATATACTGTACTTGTCAGTATACACAAATGTTACCTTCTCAAAAAAATTGATAAAATAAGTATCAAAGCTTATTAATGTTCTCAATAGTCACACTCTTGCTTCCTGTTTGTTATGCAGTTCCACCTCAATCCTGTTCATGCAATTGTACAGCTCCGACCATCACTGCAGCATCGT</genome_strand>
        <mrna_strand>TTCACTATTCCATCCAAAAAATTGCAGAGATGGATTTGGACTTCGACGGCCCAAGTAAAGTCCCGAACAGGCAAGCTCGTTTCGCTCCCAAGAATTCCAAATTGAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGATATTTCGACTAAAAAGGAAGAATTGCTATCTCAACCCCCACTAAGAGATCATATAGGGAAAAACGGAGAGGCAACGGTTGAGGACAACGTTCCATTGAATGGAGATACTACGGGAAACGACCTTGCAGAAGAACAAGTCACAATGGAAACTGATAGCGATCGAGATGAAGTTGTCCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAG.........................................................................................TTCTATGTACTCCAATATCCGTTGAGATCCGAATGGCGTCCCTATGGATTGGATGAAAAATGCCAAGAC...........................................................................................................................................GTGAGGTTGAGACCTTCAACGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTATGAATTTCGACAGAGACTCTGTACATGCAGCAACGATAAAAAAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTCTACAAAATGGGTGCCATTATCTACTTGTGCTGACTTTGCTGTTGGGATCCTCATTGGTGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACCTCAATCCTGTTCATGCAGTTGTACAGCTCCGACCATCACTGCAGCATCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E446793" ref_strand="+" ref_description="SGN-E446793 [cSTA-23-C1]">
      <seq>ttcactattccatccaaaaaattgcagagatggatttggacttcgacggcccaagtaaagtcccgaacaggcaagctcgtttcgctcccaagaattccaaattgaagccccaacccaaaagtgaaacactgccattgaaggtagattcagatatttcgactaaaaaggaagaattgctatctcaacccccactaagagatcatatagggaaaaacggagaggcaacggttgaggacaacgttccattgaatggagatactacgggaaacgaccttgcagaagaacaagtcacaatggaaactgatagcgatcgagatgaagttgtccgtgaagttgacgtgtggcttaccccttccgccaatgagttctatgtactccaatatccgttgagatccgaatggcgtccctatggattggatgaaaaatgccaagacgtgaggttgagaccttcaacggcagaaatggaagttgatttggcaatagattttgattctatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="145906" stop="147233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146206" g_stop="146570" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146660" g_stop="146728" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="434" r_length="69" r_score="0.942"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139">
            <donor d_prob="0.985" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="146868" g_stop="146933" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="500" r_length="66" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E446793" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E446793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146206" e_stop="146570"/>
          <exon e_start="146660" e_stop="146728"/>
          <exon e_start="146868" e_stop="146933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTTTTCCATCCAGAAAATTGCAGTGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGGTAGATTTTCTTGATTCAATATACGTCTGTTTTATTGTTGAATTTGCAAATTTTTCTATTTGTGAAGTATATTTTCTTTTCTTTTTCAGTTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGTTACAACTGCTTTTAGTGTTTTCCTTTGAACAAATTGGTCACTGTTATGTGATATTGCTAAAGACAGGAATTGATTGGCTGGTTTTAAATGACCAGTTTGGATGTCTAAAATCGATTTTTTAATCATTTTGCAGGTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAAT</genome_strand>
        <mrna_strand>TTCACTATTCCATCCAAAAAATTGCAGAGATGGATTTGGACTTCGACGGCCCAAGTAAAGTCCCGAACAGGCAAGCTCGTTTCGCTCCCAAGAATTCCAAATTGAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGATATTTCGACTAAAAAGGAAGAATTGCTATCTCAACCCCCACTAAGAGATCATATAGGGAAAAACGGAGAGGCAACGGTTGAGGACAACGTTCCATTGAATGGAGATACTACGGGAAACGACCTTGCAGAAGAACAAGTCACAATGGAAACTGATAGCGATCGAGATGAAGTTGTCCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAG.........................................................................................TTCTATGTACTCCAATATCCGTTGAGATCCGAATGGCGTCCCTATGGATTGGATGAAAAATGCCAAGAC...........................................................................................................................................GTGAGGTTGAGACCTTCAACGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E359122" ref_strand="+" ref_description="SGN-E359122 [cLHT-11-J22]">
      <seq>tcacttttccatccagaaaattgcagagatggatttggacttctacggtgcaagtaaagtcccgagcaggcaagcccgttttgttcccaagaactccaaattaaagccccaacccaaaagcgaaacactgccattgaaggtagattcacatattccgactaaaaaggaagaatttgtatcacaaccccctctaagagatcatatatggaaaaacggagaggcaacagttgaggacgacgttcctttgaatggagagactacgggaaacgatcttgcagaataacaagtcggaatggaaactgatcgcgatcaggatgaagttgttcgtgaagttgacgtgtggcttacccctttcgccaatgagttctatgtactccaatatccgctgaggttcgaatggcgtgcctatggattggatgaaagatgccatgacgtgaggctgagaccttcatcggcagaaatggaagttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="145907" stop="147206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146207" g_stop="146570" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146660" g_stop="146728" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="433" r_length="69" r_score="0.913"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139">
            <donor d_prob="0.985" d_score="0.88"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="146868" g_stop="146906" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="472" r_length="39" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E359122" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146207" e_stop="146570"/>
          <exon e_start="146660" e_stop="146728"/>
          <exon e_start="146868" e_stop="146906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTTTTCCATCCAGAAAATTGCAGTGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGGTAGATTTTCTTGATTCAATATACGTCTGTTTTATTGTTGAATTTGCAAATTTTTCTATTTGTGAAGTATATTTTCTTTTCTTTTTCAGTTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGTTACAACTGCTTTTAGTGTTTTCCTTTGAACAAATTGGTCACTGTTATGTGATATTGCTAAAGACAGGAATTGATTGGCTGGTTTTAAATGACCAGTTTGGATGTCTAAAATCGATTTTTTAATCATTTTGCAGGTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGAT</genome_strand>
        <mrna_strand>TCACTTTTCCATCCAGAAAATTGCAGAGATGGATTTGGACTTCTACGGTGCAAGTAAAGTCCCGAGCAGGCAAGCCCGTTTTGTTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGCGAAACACTGCCATTGAAGGTAGATTCACATATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATATGGAAAAACGGAGAGGCAACAGTTGAGGACGACGTTCCTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAATAACAAGTCGGAATGGAAACTGATCGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTTCGCCAATGAG.........................................................................................TTCTATGTACTCCAATATCCGCTGAGGTTCGAATGGCGTGCCTATGGATTGGATGAAAGATGCCATGAC...........................................................................................................................................GTGAGGCTGAGACCTTCATCGGCAGAAATGGAAGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E416858" ref_strand="+" ref_description="SGN-E416858 [STM-23-F16]">
      <seq>atttcgactaaaaaggaagaattgctatctcaacccccactaagagatcatatagggaaaaacggagaggcaacggttgaggacaacgttccattgaatggagatactacgggaaacgaccttgcagaagaacaagtcacaatggaaactgatagcgatcgagatgaagttgtccgtgaagttgacgtgtggcttaccccttccgccaatgagttctatgtactccaatatccgttgagatccgaatggcgtccctatggattggatgaaaaatgccaagacgtgaggttgagaccttcaacggcagaaatggaagttgatttggcaatagattttgattctatgaatttcgacagagactctgtacatgcagcaacgataaaaaagcagattgtttctacaaaatgggtgccattatctacttgtgctgactttgctgttgggatcctcattggtgataagttacacctcaatcctgttcatgcagttgtacagctccgaccatcactgcagcatcgtaaggaaagtgagttgaagaaccttnaccaccagcatgatgaaaaaagttgtgaaaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="146058" stop="148996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146358" g_stop="146570" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.915"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146660" g_stop="146728" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="282" r_length="69" r_score="0.942"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139">
            <donor d_prob="0.985" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="146868" g_stop="146975" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="390" r_length="108" r_score="0.954"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="146976" i_stop="147882" i_length="907">
            <donor d_prob="0.982" d_score="0.92"/>
            <acceptor a_prob="0.665" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="147883" g_stop="147954" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="462" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="147955" i_stop="148581" i_length="627">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="148582" g_stop="148696" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="577" r_length="115" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E416858" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146358" e_stop="146570"/>
          <exon e_start="146660" e_stop="146728"/>
          <exon e_start="146868" e_stop="146975"/>
          <exon e_start="147883" e_stop="147954"/>
          <exon e_start="148582" e_stop="148696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAGGTAGATTTTCTTGATTCAATATACGTCTGTTTTATTGTTGAATTTGCAAATTTTTCTATTTGTGAAGTATATTTTCTTTTCTTTTTCAGTTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGATGTGAGTTACAACTGCTTTTAGTGTTTTCCTTTGAACAAATTGGTCACTGTTATGTGATATTGCTAAAGACAGGAATTGATTGGCTGGTTTTAAATGACCAGTTTGGATGTCTAAAATCGATTTTTTAATCATTTTGCAGGTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGACTCTGTACATGCAGCAACAATAAAAAAACAGGTTCTTTTAGAGCTATGGAAGCTAGACTTTTATTGTTTTTTCTCTTCTTAAACCAGCAATAAAGACAAAAAAAAGAATCTAGGTGATTTATTTTTATATGTGTAAGACTTGTGCAGGAGCTACCAGCTACATTTGTTGGTTAGGGGCATATTACTTAGTCGGAAAAACATTGCAGCTCTTTTCGTCATGTCGCTTTCCTTTTGTTTGGTAACTCTTTAATTTTAGCATGTTTAAAACCACAAAATGAAAGGACATTTAGTCCCTTCTACCTTTTCTTAGTTTACGACCACAAGATTCAAAACTCTTCATATCTTAAACTATGTGCCAAGTCGAAACGAGTCAAACAAATTAAAATGGAGGGAGTATTACATTCCTCCCATTTCTCTGCCTTAAATTCCATTTGTAATACCATCTGTTTTGGGCCTACTCCTTGCTCTTAATGGACACGTGTATATACAGACAAAGGCAGACCCGCGTGTGGGAGGAGGTGGGGTGGGGGGTCATGGGATCCTGTTGACTTTAGGAGGAGTCGAGTGTTCAATTTTGTTTTCTTTAAGCCTCAATTTTCTTAACAAAAGAGGCTCAAAAATTTTCAAATGTAATGTTTAGAGCAAGAGTCGATCCTACACCCTTTACAGAGCAAATGAGGTGTTGGAACAAGAATCACTTTGTTAAGCTTTGTCATTTTTGCTTAATATATCCACTTCTTTGTAATCAGGTGGTGTCACATTCAACATGCATTCGACTTCACGGTTGTAACTTTGTTGTTAGTAGTAGGATAAGGAGGTTGTATTTTGAGAACTTTGACAATTAGAGTCTGGAAACTCCGCACTTGATATTTGTTCCCTTAGCAGGAATTACAGTTCTAATTGTTTGACCCAGAATCTGATTGGTTCTGAATTTCTAGATTGTTTCTACAAAATGGGTGCCATCATCTACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAGGTAAATGATTTGTTGTTGATGGCTTGAATGCATATTTAGCATCTGGTCTCGTGGAGTTCTGATTGACTAAAAGTTAGTCCTTCACAGGTTTTATATGTGCTTATCCTGTTCTGCTTTTGTCCTTTTTTTGTAATTATTAAAAAATAACTAATTTGGACCAGAACAATATCGGGCGGCTACACTCTCAACCTCAAATGTAATCAAGTCAATCTTTTATCAGCTTCAAGTTGAAGCAAACTATTTGCTGTCTGCTGTCAAATCTAACTCAACTGTTACCTATGGAGTTGGAAATTGTTATAATACCTCTGGCTCTCTTATTTAGCCCAAGTTCTGCCACTTAATATTAAAAAATTGTCAAGTCCTAGTTATATTCTTCTGTTTCTTATATAAATTGGTGTGAGGAACTTCAAGTAAAATCTCTAAGTTTGATGATAACTATCTGAAGCTCATTGCTGCAGTCAAAAGAAAAAATATACTGTAAAAATGCTTTTTACTTTTCAGTACAACCTATATACTGTACTTGTCAGTATACACAAATGTTACCTTCTCAAAAAAATTGATAAAATAAGTATCAAAGCTTATTAATGTTCTCAATAGTCACACTCTTGCTTCCTGTTTGTTATGCAGTTCCACCTCAATCCTGTTCATGCAATTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAGAACCTT-ACCACCAGCAATGATGAAAAAAGTTGTGAAAACG</genome_strand>
        <mrna_strand>ATTTCGACTAAAAAGGAAGAATTGCTATCTCAACCCCCACTAAGAGATCATATAGGGAAAAACGGAGAGGCAACGGTTGAGGACAACGTTCCATTGAATGGAGATACTACGGGAAACGACCTTGCAGAAGAACAAGTCACAATGGAAACTGATAGCGATCGAGATGAAGTTGTCCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAG.........................................................................................TTCTATGTACTCCAATATCCGTTGAGATCCGAATGGCGTCCCTATGGATTGGATGAAAAATGCCAAGAC...........................................................................................................................................GTGAGGTTGAGACCTTCAACGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTATGAATTTCGACAGAGACTCTGTACATGCAGCAACGATAAAAAAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTCTACAAAATGGGTGCCATTATCTACTTGTGCTGACTTTGCTGTTGGGATCCTCATTGGTGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACCTCAATCCTGTTCATGCAGTTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAGAACCTTNACCACCAGC-ATGATGAAAAAAGTTGTGAAAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E268671" ref_strand="+" ref_description="SGN-E268671 [cLEM-9-A23]">
      <seq>gaatgccatttgtcctgctagaccaactgacattgacagattaagaaatcttagaacaaggttgtctcagaaaccttttgaagaacgtgttataacttggcttcttgagggacctccaattcatcgttttgatactctaaagcacctatctccagataatcctgttgatgagattttggaagttctcaaaagttgcgcacaattagttcaaggattgtgggttgcataaagttcattagtctatgacacaaacaatggagtctaaattttagcgaggaattttgttctttatgagtttaccaagagtacttttattatataagtcactgtttggctagaggcctgaattccttaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="150454" stop="153902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150754" g_stop="150813" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="150814" i_stop="153172" i_length="2359">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.935" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="153173" g_stop="153221" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="109" r_length="49" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="153222" i_stop="153353" i_length="132">
            <donor d_prob="0.954" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="153354" g_stop="153602" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="359" r_length="250" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E268671" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150754" e_stop="150813"/>
          <exon e_start="153173" e_stop="153221"/>
          <exon e_start="153354" e_stop="153602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAGGTACTGCAGACACTTTAGTTGGTCCTTCACATCTATTGTTTTGACATTGAAAGGTCTGGAGGTGCTGCTAAAGACAAAAAGAAAATTTTATTTACATCTATGATCGTAGAGCTGTCTTCTTCTTTGATATGTGGCGTAATCATCCTCTAGTATTGTTGGACCATTCAACTAACTGCAAATTATCATCTTCTTTTTCAAAGAAATCACATATTACTGTAATCTGTTTCCTTATCTCCCCCTTCCACTTTATTTATTTAATTAGTTAATCTCTTTTTGCTTTCTGTACAATGTTAAGATGAGATTTTGATGATCTTTGATTACTTGTTGATAATCTAGTTTTTAGTTAGCAATTGACTCGTCTTTGGTTGATGGACTGGTAATTTCCTACAGTGTCAGAGATTAGATTCACATAGTAGCTTAAGCCTAGGCACAACGTCAATGGATGTAATTCTGATTGACTAAATTTGTAGATCAAATTGGGAAGGAGAACGTTTTTCTGAGATGGGGAAAAATCTCTCTAGTGGCGGATCCAGATTTTTTCACTACAAGGGTTCAAAAAATGAAAATGTAGTACTTGAGATTTGAACTTGGAACCTCATGGTGAATTTTGAACCCCCTCAGCCAACGTCATCTTATATTTAGGAGGTTCAAAATCTCTATATGTACACAAAAATTTAAAAATATCCAAATGGTGTCATTTTTAGTCGAGGGTTTGGGTGAACCCTCTAGATCCACCTTGACATGAATGCTTCTGCTGGCTTGGACTCAGGGGAGAAAGGAGAATTTCACTAACAGATCAAGTTCAACAAAATATTGTGGAGGGGATTTCTAAAAATGCAGCATTGGGAGGTTTAGCTAATCTTTGACGATGTGTGATGTTGGATCAAATAATATTTTGGGGGGAAAATTAGTAGAGAATGTGAACACAAGAAAATACTGGAAGCTATTAGGTGCTCAAACTCTAAGGTCCAGTCTGTCCCCCCACCCCTCACCCCACCCCCACCCATTTTGATGGTTGAACTTGGTCTATATTTCGGTCAAGTACATATTGGTGTTCCCTCTAAGGTGTGCTTTAGAAACAATCTAGATTCTGAATTCTCTCAGTATTGCATATGTCAGTCAAAAGTTGGAAAAAAGTCTCCAGTCTGCTGGGGCTATGAAGATTTTGATACTAACACCATGAAGTGGTAGGCTAAGCAGGAAAAGGAGAGAACTCAGACTTGAATTGCGAGGCAAAATTAAAGCGTGCATTTTACTGAAGAAAACTGAATCAAGACCATAAAAATTTAAAAAAGTTATACTTGTAAAGATAAATTAACTATAAACACAAACAACTATATGGACAAATCAAAGCAGACAGGTGTCCTGACTTTGAGCTTCACAACCACCATTACGAAAAAAATTCCTCGTGCTTGACCCATGGAAAAGAATAAGACTTGCATGTTTGGGGTGTGTTGTAAGCACGACTAAATAAATAAGAGTATGCTCTGTTAATCCGCCTCAACTTTTAGATGAGGTGTTCACTCACTCCAACATCTATTTTTATAGTATATGCAGGAAGCATTGTTGTCCCCGGTTTATAAAAAAATGTGTTACGGAATTAATTTTGGCATTGTGGTGGTAGGTGGGGGTGGGGGAGGGGGAGAGGGAGAGTAGGTTAAAGGCTTAAAGCTTTGTTGCTTTCTTGGTTTGTCATTGTAATAAATATGAGCTGTATGAAATGCAAGTTTACATTATGCTTTGTTTGCTAGAGAACCTAATCTTCCAGAAAGTAGTTTTTGTTCTCGATGTTCTAGCAATGAAATAAATAAGAAAACATGGTCTTGCTTCTTTCTAGTTTTGGAGTGATTGGCAGATCTACAAAAATCTTCGGGGCATTTTTATGTGATAAATCTTATTTCCATTTCTTTTGTTCATCACTTCTTGAGGCCGAGGACGGGAGTGGACTGTTGTTCCAGAATATGCTGTTGGATACATTTTCACCATGTTACTTGGCCAAACTTGCACCTCACTGGTCATCTTATCCTTGGTGTTCTACCTTTGTCATCTATCAAATTGATTTCTTTTCATTTAAAAAGAACTTTGTTCTAAATAGCCATCAGTTGTTAAAGTTGATTCCTTGGAATTAATTATTATTGACTGGTGTGACTTGTATTCATTCTAGGTGTGCTGGTGTAGTAAAATATAAATATGCAGTTTCTCTAGCCAGAAGTTTGCTGTTTCTTCCATTCAGTATCCAAGCCATGTAGAATAGATATCAGTACTGGATATGCCATATTTCTCAATTATGTTAAATTAGCATTCTTTCCCAGTCATTTTATGCTCCTAACTTGTAAATTGCCAAATGGATGGTTTTCAGGTTGTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAGGTTTGTACCTACTATTTGGATTTTGCACTGCTTATATTTTTATGCCTGCAAGGCTGCAACAAAGTTTGTTTAGATGGCCCCATGGTGCTTATAACTCAGCACATTTCTAAATATGAATTCTTTTCGCAACAGGGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAAGTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCATTAGTCTATGACACAAACAATGGAGTCGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAAGAGTACTTTAATTA-AGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCT</genome_strand>
        <mrna_strand>GAATGCCATTTGTCCTGCTAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCTCAGAAACCTTTTGAAGAACGTGTTATAACTTGGCTTCTTGAG....................................................................................................................................GGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTATCTCCAGATAATCCTGTTGATGAGATTTTGGAAGTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCATAAAGTTCATTAGTCTATGACACAAACAATGGAGTCTAAATTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAAGAGTACTTTTATTATATAAGTCACTGTTTGGCTAGAGGCCTGAATTCCTTAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E269479" ref_strand="+" ref_description="SGN-E269479 [cLEM-2-H19]">
      <seq>atgccatttgtcctgcaagaccaactgacattgacagattaagaaatcttagaacaaggttgtctcataaaccttttgaagaacgtgttagaacttggctttttgagggacctccaattcatcgttttgatactctaaagcacctagctccagataatcctgttgatgagattttggaagttctcaaaagttgcgcacaattagatcaaggattgtgggatgcaaaaagttcattactctatgacacaaacaatgtattcgaagttttagcgaggaattctgatctttatgagtttaccaagagtactttaattaaaaagtcactgtttggcatgatgcctgaattccttaaagctgcgacaccagttctaaaatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="150456" stop="153925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150756" g_stop="150813" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="150814" i_stop="153172" i_length="2359">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="153173" g_stop="153221" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="107" r_length="49" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="153222" i_stop="153353" i_length="132">
            <donor d_prob="0.954" d_score="0.96"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="153354" g_stop="153625" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="379" r_length="272" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E269479" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150756" e_stop="150813"/>
          <exon e_start="153173" e_stop="153221"/>
          <exon e_start="153354" e_stop="153625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAGGTACTGCAGACACTTTAGTTGGTCCTTCACATCTATTGTTTTGACATTGAAAGGTCTGGAGGTGCTGCTAAAGACAAAAAGAAAATTTTATTTACATCTATGATCGTAGAGCTGTCTTCTTCTTTGATATGTGGCGTAATCATCCTCTAGTATTGTTGGACCATTCAACTAACTGCAAATTATCATCTTCTTTTTCAAAGAAATCACATATTACTGTAATCTGTTTCCTTATCTCCCCCTTCCACTTTATTTATTTAATTAGTTAATCTCTTTTTGCTTTCTGTACAATGTTAAGATGAGATTTTGATGATCTTTGATTACTTGTTGATAATCTAGTTTTTAGTTAGCAATTGACTCGTCTTTGGTTGATGGACTGGTAATTTCCTACAGTGTCAGAGATTAGATTCACATAGTAGCTTAAGCCTAGGCACAACGTCAATGGATGTAATTCTGATTGACTAAATTTGTAGATCAAATTGGGAAGGAGAACGTTTTTCTGAGATGGGGAAAAATCTCTCTAGTGGCGGATCCAGATTTTTTCACTACAAGGGTTCAAAAAATGAAAATGTAGTACTTGAGATTTGAACTTGGAACCTCATGGTGAATTTTGAACCCCCTCAGCCAACGTCATCTTATATTTAGGAGGTTCAAAATCTCTATATGTACACAAAAATTTAAAAATATCCAAATGGTGTCATTTTTAGTCGAGGGTTTGGGTGAACCCTCTAGATCCACCTTGACATGAATGCTTCTGCTGGCTTGGACTCAGGGGAGAAAGGAGAATTTCACTAACAGATCAAGTTCAACAAAATATTGTGGAGGGGATTTCTAAAAATGCAGCATTGGGAGGTTTAGCTAATCTTTGACGATGTGTGATGTTGGATCAAATAATATTTTGGGGGGAAAATTAGTAGAGAATGTGAACACAAGAAAATACTGGAAGCTATTAGGTGCTCAAACTCTAAGGTCCAGTCTGTCCCCCCACCCCTCACCCCACCCCCACCCATTTTGATGGTTGAACTTGGTCTATATTTCGGTCAAGTACATATTGGTGTTCCCTCTAAGGTGTGCTTTAGAAACAATCTAGATTCTGAATTCTCTCAGTATTGCATATGTCAGTCAAAAGTTGGAAAAAAGTCTCCAGTCTGCTGGGGCTATGAAGATTTTGATACTAACACCATGAAGTGGTAGGCTAAGCAGGAAAAGGAGAGAACTCAGACTTGAATTGCGAGGCAAAATTAAAGCGTGCATTTTACTGAAGAAAACTGAATCAAGACCATAAAAATTTAAAAAAGTTATACTTGTAAAGATAAATTAACTATAAACACAAACAACTATATGGACAAATCAAAGCAGACAGGTGTCCTGACTTTGAGCTTCACAACCACCATTACGAAAAAAATTCCTCGTGCTTGACCCATGGAAAAGAATAAGACTTGCATGTTTGGGGTGTGTTGTAAGCACGACTAAATAAATAAGAGTATGCTCTGTTAATCCGCCTCAACTTTTAGATGAGGTGTTCACTCACTCCAACATCTATTTTTATAGTATATGCAGGAAGCATTGTTGTCCCCGGTTTATAAAAAAATGTGTTACGGAATTAATTTTGGCATTGTGGTGGTAGGTGGGGGTGGGGGAGGGGGAGAGGGAGAGTAGGTTAAAGGCTTAAAGCTTTGTTGCTTTCTTGGTTTGTCATTGTAATAAATATGAGCTGTATGAAATGCAAGTTTACATTATGCTTTGTTTGCTAGAGAACCTAATCTTCCAGAAAGTAGTTTTTGTTCTCGATGTTCTAGCAATGAAATAAATAAGAAAACATGGTCTTGCTTCTTTCTAGTTTTGGAGTGATTGGCAGATCTACAAAAATCTTCGGGGCATTTTTATGTGATAAATCTTATTTCCATTTCTTTTGTTCATCACTTCTTGAGGCCGAGGACGGGAGTGGACTGTTGTTCCAGAATATGCTGTTGGATACATTTTCACCATGTTACTTGGCCAAACTTGCACCTCACTGGTCATCTTATCCTTGGTGTTCTACCTTTGTCATCTATCAAATTGATTTCTTTTCATTTAAAAAGAACTTTGTTCTAAATAGCCATCAGTTGTTAAAGTTGATTCCTTGGAATTAATTATTATTGACTGGTGTGACTTGTATTCATTCTAGGTGTGCTGGTGTAGTAAAATATAAATATGCAGTTTCTCTAGCCAGAAGTTTGCTGTTTCTTCCATTCAGTATCCAAGCCATGTAGAATAGATATCAGTACTGGATATGCCATATTTCTCAATTATGTTAAATTAGCATTCTTTCCCAGTCATTTTATGCTCCTAACTTGTAAATTGCCAAATGGATGGTTTTCAGGTTGTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAGGTTTGTACCTACTATTTGGATTTTGCACTGCTTATATTTTTATGCCTGCAAGGCTGCAACAAAGTTTGTTTAGATGGCCCCATGGTGCTTATAACTCAGCACATTTCTAAATATGAATTCTTTTCGCAACAGGGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAAGTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCATTAGTCTATGACACAAACAATGGAGTCGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAAGAGTACTTTAATTAAGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCTGCGACACCAGTTCTAAAATCATT</genome_strand>
        <mrna_strand>ATGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCTCATAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTTTTGAG....................................................................................................................................GGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAAGTTCTCAAAAGTTGCGCACAATTAGATCAAGGATTGTGGGATGCAAAAAGTTCATTACTCTATGACACAAACAATGTATTCGAAGTTTTAGCGAGGAATTCTGATCTTTATGAGTTTACCAAGAGTACTTTAATTAAAAAGTCACTGTTTGGCATGATGCCTGAATTCCTTAAAGCTGCGACACCAGTTCTAAAATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E282511" ref_strand="+" ref_description="SGN-E282511 [cLER-18-M4]">
      <seq>aaaactcatttctagccctagttttgtactgaagagaaaaattagggtaaaaacgtagtggaacgatgcaggaatatgaaggtaatggagaagatatagagaataatggttcttctccttacagtgactccaagtctcagcatacttctcgtgaccccgagaaagaaaggggctcatcaagaagcagggagaaggagagggagaaagggcgtgataaagaccgggacagggacaggaatagagatagagatagagacagggacagaggtaaggaaagggacaaagatagggatagggacagagagagggagaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgataggagggagaggatcagagatcgagatgaagatgatcttcagcgaactcgagattacgataggcgaagagacaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="159877" stop="161878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="160177" g_stop="160316" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="160993" g_stop="161273" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="421" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="161564" g_stop="161578" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="436" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E282511" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E282511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="160177" e_stop="160316"/>
          <exon e_start="160993" e_stop="161273"/>
          <exon e_start="161564" e_stop="161578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAGGTATTTTTTTTTTCGATAAAAAAATGGATTTGAACTTATAAAGGTGATGAAGTAATACACGTAGATATTTGCTTTAATTAGGGTTACGTATATGCTTTTGATTGTTTTATGTTCGATGACTGGGAAAGTTTTATATGAATTGCTTGATGGGATGCGATAGCTGGGTATATCTCTGTCTCTGTGTGTAGTTATGGTTTATGGAGTGTTGTGTTGATGAATTTCTTTTCTTAAGGGCGTTTATTCGACTACTTGTTCCGCTAGAAAGAGTGATGGGATTTGGAATAGAAGCATCAAAACATGTATAATCGGACAATTATTTTTTGAATTCAAATTACACTGTTGGAGTTATGGAATAGAGCCGATTACATAAAAGATGTAGGCTGTTTTTGTTGGTGGTCGGGTTGAGGAGTATTGCCTATGGTTGGCCTCTGGTAGGATCCAGAGAGGAGCTGGTTTGCTCCTGTTGGACAGCAGTTCTGATCTTTAACCTGTAAACGTAGCCAAAACAAAAATTTTATGATATAAAATTATTTTCCCTGATTTGTGTTGCTCTTTGTTTTAATTTCCTTAGCTTTAGATTAGTATGGCTTCTGCTGTATGGTATTCCGTTTTTGTTTATATTTTTAAGTTTTGTTGTTCTCTTCATAGACTAAACATTTTTATTATCATTTTCCAGCATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAGGTGAGTTCAAATGCAGTTCTAAAAGTTAGTTGGATTCATGTTCTGTACCTCTTTTCAGGTACTCATGTATGATGATAATACATAATTGTGGTATTCATTTTAAGAATCATGTTTGATTTAATTTTGAAGTGCTGTTTTTTCTTTGTCACTGTTCTCTATGCTCGACATGCTTTAGTGTGAGCTTCATATGAGATTCACCATTCATGTGTTTGGTGCTTGCTGATTTAGTGTCTCAACCAATTTCTTATCTTTCTTATGTTCTTGTATATGATTGTTTATTTATCCCTCAGGCGAAGAGACAATGA</genome_strand>
        <mrna_strand>AAAACTCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG..................................................................................................................................................................................................................................................................................................GCGAAGAGACAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309534" ref_strand="+" ref_description="SGN-E309534 [cTOA-3-E9]">
      <seq>tcatttctagccctagttttgtactgaagagaaaaattagggtaaaaacgtagtggaacgatgcaggaatatgaaggtaatggagaagatatagagaataatggttcttctccttacagtgactccaagtctcagcatacttctcgtgaccccgagaaagaaaggggctcatcaagaagcagggagaaggagagggagaaagggcgtgataaagaccgggacagggacaggaatagagatagagatagagacagggacagaggtaaggaaagggacaaagatagggatagggacagagagagggagaaggaccgtgatcgtcatcacagagatcgtcatanggatcggagtgataggagggagaggatcagagatcgagatgaagatgatcttcagcgaactcgagattacgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="159882" stop="161571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="160182" g_stop="160316" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="160993" g_stop="161271" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="414" r_length="279" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E309534" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="160182" e_stop="160316"/>
          <exon e_start="160993" e_stop="161271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAGGTATTTTTTTTTTCGATAAAAAAATGGATTTGAACTTATAAAGGTGATGAAGTAATACACGTAGATATTTGCTTTAATTAGGGTTACGTATATGCTTTTGATTGTTTTATGTTCGATGACTGGGAAAGTTTTATATGAATTGCTTGATGGGATGCGATAGCTGGGTATATCTCTGTCTCTGTGTGTAGTTATGGTTTATGGAGTGTTGTGTTGATGAATTTCTTTTCTTAAGGGCGTTTATTCGACTACTTGTTCCGCTAGAAAGAGTGATGGGATTTGGAATAGAAGCATCAAAACATGTATAATCGGACAATTATTTTTTGAATTCAAATTACACTGTTGGAGTTATGGAATAGAGCCGATTACATAAAAGATGTAGGCTGTTTTTGTTGGTGGTCGGGTTGAGGAGTATTGCCTATGGTTGGCCTCTGGTAGGATCCAGAGAGGAGCTGGTTTGCTCCTGTTGGACAGCAGTTCTGATCTTTAACCTGTAAACGTAGCCAAAACAAAAATTTTATGATATAAAATTATTTTCCCTGATTTGTGTTGCTCTTTGTTTTAATTTCCTTAGCTTTAGATTAGTATGGCTTCTGCTGTATGGTATTCCGTTTTTGTTTATATTTTTAAGTTTTGTTGTTCTCTTCATAGACTAAACATTTTTATTATCATTTTCCAGCATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGAT</genome_strand>
        <mrna_strand>TCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATANGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E449338" ref_strand="+" ref_description="SGN-E449338 [cSTS-6-M3]">
      <seq>cttttctagccctagttttgtactcctctctctcaaggagaagaagagataaattagagtaacgtagtggaacgatgcaggaatatgaaggtaacggagaagatatagagaataatggttcttctccttacagtgactccaagtctcagcgtacttctcgtgaccccgaaaaagaaaggggctcatcaagaagcagggaaaaggagagggagaaagggcgtgataaagacagggacagggataggaatgtagatagagacagggacagagttaaggaaagggacaaagatatggatagggacagagagagggagaagggccgtgatcgtcatcatagagatcgtcatagggatcggagtgataggagggagaggaccagagatcgagatgaagatgatcttcagcgaactcgagattacgataggagaagagacaatgacaaagatagagaggaccgacagagacacaagcctagctctaggggtagatccgagcatagatcaaggtctagatcacggtcgccatctaagagcaaaaggatcagtggttttgatatggcacctcctaccagtgcattgttatctggcgctactgatgttgcaggtcaagttccggggacgactaacccatcaattcctggaatgttttctaacatgtttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="159883" stop="163365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="160235" g_stop="160316" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="149" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="160993" g_stop="161273" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="424" r_length="275" r_score="0.943"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="161564" g_stop="161671" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="532" r_length="108" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.813" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="162327" g_stop="162397" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="603" r_length="71" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="163007" g_stop="163065" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="662" r_length="59" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E449338" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E449338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="160235" e_stop="160316"/>
          <exon e_start="160993" e_stop="161273"/>
          <exon e_start="161564" e_stop="161671"/>
          <exon e_start="162327" e_stop="162397"/>
          <exon e_start="163007" e_stop="163065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAGGTATTTTTTTTTTCGATAAAAAAATGGATTTGAACTTATAAAGGTGATGAAGTAATACACGTAGATATTTGCTTTAATTAGGGTTACGTATATGCTTTTGATTGTTTTATGTTCGATGACTGGGAAAGTTTTATATGAATTGCTTGATGGGATGCGATAGCTGGGTATATCTCTGTCTCTGTGTGTAGTTATGGTTTATGGAGTGTTGTGTTGATGAATTTCTTTTCTTAAGGGCGTTTATTCGACTACTTGTTCCGCTAGAAAGAGTGATGGGATTTGGAATAGAAGCATCAAAACATGTATAATCGGACAATTATTTTTTGAATTCAAATTACACTGTTGGAGTTATGGAATAGAGCCGATTACATAAAAGATGTAGGCTGTTTTTGTTGGTGGTCGGGTTGAGGAGTATTGCCTATGGTTGGCCTCTGGTAGGATCCAGAGAGGAGCTGGTTTGCTCCTGTTGGACAGCAGTTCTGATCTTTAACCTGTAAACGTAGCCAAAACAAAAATTTTATGATATAAAATTATTTTCCCTGATTTGTGTTGCTCTTTGTTTTAATTTCCTTAGCTTTAGATTAGTATGGCTTCTGCTGTATGGTATTCCGTTTTTGTTTATATTTTTAAGTTTTGTTGTTCTCTTCATAGACTAAACATTTTTATTATCATTTTCCAGCATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAGGTGAGTTCAAATGCAGTTCTAAAAGTTAGTTGGATTCATGTTCTGTACCTCTTTTCAGGTACTCATGTATGATGATAATACATAATTGTGGTATTCATTTTAAGAATCATGTTTGATTTAATTTTGAAGTGCTGTTTTTTCTTTGTCACTGTTCTCTATGCTCGACATGCTTTAGTGTGAGCTTCATATGAGATTCACCATTCATGTGTTTGGTGCTTGCTGATTTAGTGTCTCAACCAATTTCTTATCTTTCTTATGTTCTTGTATATGATTGTTTATTTATCCCTCAGGCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAGGTTTGTCTTACTCCTATATCTTCTTGTAGGAGCATTATCAAGATACGTTTTATTGGTTATTTTTGATGTCCTAATGCTCCGTTAGACTGGTTTCTTTCTTTTGAACTTTGAGTGAAGCAAATTGTAATTTGCTGTGATGTTGGCAAGACTGGTCATTGGACTATTTGATCTGTCAATTTGGAAAGAAATCACAAGTGTTGATGTTTTAGAAATTAGAACTATAGATAGAATTGGGCTAAAACATTAGGTGAAGACTTTGTTATTTGGCCATATGAGCTGATGTTGCCATGTTGGCTTACAAAAGTATTTGTTCTTGCAAAATCTTAAAGCTACTATGATGACTTTCACTCTCTAATTACTGGAACCTATTGGATTTTAACTGTTTGTTCTTTTCCTTTATTTTTTTTTCCTTTTGAATTCTCTGGGGTAAAGTCTGTTTATATTCTACTTTACATTCTATTGGCCTCCCTAGACCTCACTTGTGGGATTGCACTGGGTATGTTGTTATTGTGATTTTTCTGTCAGTGGCTAACTTCTATACAGATCGTAGAAAGTTAAATTTTCAACCATTTTATTATTTCATTCTCAAAAAGAATAATTCATTCTCAAAAAAATTTATCACTTCGCTGTTGGTACTAATGATGGTTCTTTTCAGCAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCT</genome_strand>
        <mrna_strand>TGGAACGATGCAGGAATATGAAGGTAACGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTACTTCTCGTGACCCCGAAAAAGAAAGGGGCTCATCAAGAAGCAGGGAAAAGGAGAGGGAGAAAGGGCGTGATAAAGACAGGGACAGGGATAGGAAT---G-T--AGATAGAGACAGGGACAGAGTTAAGGAAAGGGACAAAGATATGGATAGGGACAGAGAGAGGGAGAAGGGCCGTGATCGTCATCATAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGACCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG..................................................................................................................................................................................................................................................................................................GAGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCGCCATCTAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGATCAGTGGTTTTGATATGGCACCTCCTACCAGTGCATTGTTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCGGGGACGACTAACCCATCAATTCCTGGAATGTTTTCTAACATGTTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257326" ref_strand="+" ref_description="SGN-E257326 [cLEG-46-L12]">
      <seq>gatgcaggaatatgaaggtaatggagaagatatagagaataatggttcttctccttacagtgactccaagtctcagcatacttctcgtgaccccgagaaagaaaggggctcatcaagaagcagggagaaggagagggagaaagggcgtgataaagaccgggacagggacaggaatagagatagagatagagacagggacagaggtaaggaaagggacaaagatagggatagggacagagagagggagaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgataggagggagaggatcagagatcgagatgaagatgatcttcagcgaactcgagattacgataggcgaagagacaatgacaaagatagagaggaccgacagagacacaagcctagctctaggggtagatccgagcatagatcaaggtctagatcacggtcaccatctaagagcaaaaggatcagtggttttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggcaatgttgggctacttgccccactgtgctgacaatgggcgtgagccgacttctgtagcttatatgtacnaggaagaatcgatacaggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="159941" stop="163368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="160241" g_stop="160316" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="160993" g_stop="161273" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="357" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="161564" g_stop="161671" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="465" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="162327" g_stop="162397" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="536" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="162398" i_stop="162678" i_length="281">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="162679" g_stop="162765" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="623" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="162766" i_stop="163006" i_length="241">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="163007" g_stop="163068" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="685" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E257326" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="160241" e_stop="160316"/>
          <exon e_start="160993" e_stop="161273"/>
          <exon e_start="161564" e_stop="161671"/>
          <exon e_start="162327" e_stop="162397"/>
          <exon e_start="162679" e_stop="162765"/>
          <exon e_start="163007" e_stop="163068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAGGTATTTTTTTTTTCGATAAAAAAATGGATTTGAACTTATAAAGGTGATGAAGTAATACACGTAGATATTTGCTTTAATTAGGGTTACGTATATGCTTTTGATTGTTTTATGTTCGATGACTGGGAAAGTTTTATATGAATTGCTTGATGGGATGCGATAGCTGGGTATATCTCTGTCTCTGTGTGTAGTTATGGTTTATGGAGTGTTGTGTTGATGAATTTCTTTTCTTAAGGGCGTTTATTCGACTACTTGTTCCGCTAGAAAGAGTGATGGGATTTGGAATAGAAGCATCAAAACATGTATAATCGGACAATTATTTTTTGAATTCAAATTACACTGTTGGAGTTATGGAATAGAGCCGATTACATAAAAGATGTAGGCTGTTTTTGTTGGTGGTCGGGTTGAGGAGTATTGCCTATGGTTGGCCTCTGGTAGGATCCAGAGAGGAGCTGGTTTGCTCCTGTTGGACAGCAGTTCTGATCTTTAACCTGTAAACGTAGCCAAAACAAAAATTTTATGATATAAAATTATTTTCCCTGATTTGTGTTGCTCTTTGTTTTAATTTCCTTAGCTTTAGATTAGTATGGCTTCTGCTGTATGGTATTCCGTTTTTGTTTATATTTTTAAGTTTTGTTGTTCTCTTCATAGACTAAACATTTTTATTATCATTTTCCAGCATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAGGTGAGTTCAAATGCAGTTCTAAAAGTTAGTTGGATTCATGTTCTGTACCTCTTTTCAGGTACTCATGTATGATGATAATACATAATTGTGGTATTCATTTTAAGAATCATGTTTGATTTAATTTTGAAGTGCTGTTTTTTCTTTGTCACTGTTCTCTATGCTCGACATGCTTTAGTGTGAGCTTCATATGAGATTCACCATTCATGTGTTTGGTGCTTGCTGATTTAGTGTCTCAACCAATTTCTTATCTTTCTTATGTTCTTGTATATGATTGTTTATTTATCCCTCAGGCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAGGTTTGTCTTACTCCTATATCTTCTTGTAGGAGCATTATCAAGATACGTTTTATTGGTTATTTTTGATGTCCTAATGCTCCGTTAGACTGGTTTCTTTCTTTTGAACTTTGAGTGAAGCAAATTGTAATTTGCTGTGATGTTGGCAAGACTGGTCATTGGACTATTTGATCTGTCAATTTGGAAAGAAATCACAAGTGTTGATGTTTTAGAAATTAGAACTATAGATAGAATTGGGCTAAAACATTAGGTGAAGACTTTGTTATTTGGCCATATGAGCTGATGTTGCCATGTTGGCTTACAAAAGTATTTGTTCTTGCAAAATCTTAAAGCTACTATGATGACTTTCACTCTCTAATTACTGGAACCTATTGGATTTTAACTGTTTGTTCTTTTCCTTTATTTTTTTTTCCTTTTGAATTCTCTGGGGTAAAGTCTGTTTATATTCTACTTTACATTCTATTGGCCTCCCTAGACCTCACTTGTGGGATTGCACTGGGTATGTTGTTATTGTGATTTTTCTGTCAGTGGCTAACTTCTATACAGATCGTAGAAAGTTAAATTTTCAACCATTTTATTATTTCATTCTCAAAAAGAATAATTCATTCTCAAAAAAATTTATCACTTCGCTGTTGGTACTAATGATGGTTCTTTTCAGCAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTA</genome_strand>
        <mrna_strand>GATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG..................................................................................................................................................................................................................................................................................................GCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.........................................................................................................................................................................................................................................................................................GCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACNAGGAAGAATCGATACAG.................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E200782" ref_strand="+" ref_description="SGN-E200782 [cLEC-9-M14]">
      <seq>gagaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgataggagggagaggatcagagatcgagatgaagatgatcttcagcgaactcgagattacgataggcgaagagacaatgacaaagatagagaggaccgacagagacacaagcctagctctaggggtagatccgagcatagatcaaggtctagatcacggtcaccatctaagagcaaaaggatcagtggttttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaagttcctgggaccactaacccatcaatacctggaatgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="160861" stop="163350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="161161" g_stop="161273" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="161564" g_stop="161671" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="221" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="162327" g_stop="162397" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="292" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="163007" g_stop="163050" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="336" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E200782" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="161161" e_stop="161273"/>
          <exon e_start="161564" e_stop="161671"/>
          <exon e_start="162327" e_stop="162397"/>
          <exon e_start="163007" e_stop="163050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAGGTGAGTTCAAATGCAGTTCTAAAAGTTAGTTGGATTCATGTTCTGTACCTCTTTTCAGGTACTCATGTATGATGATAATACATAATTGTGGTATTCATTTTAAGAATCATGTTTGATTTAATTTTGAAGTGCTGTTTTTTCTTTGTCACTGTTCTCTATGCTCGACATGCTTTAGTGTGAGCTTCATATGAGATTCACCATTCATGTGTTTGGTGCTTGCTGATTTAGTGTCTCAACCAATTTCTTATCTTTCTTATGTTCTTGTATATGATTGTTTATTTATCCCTCAGGCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAGGTTTGTCTTACTCCTATATCTTCTTGTAGGAGCATTATCAAGATACGTTTTATTGGTTATTTTTGATGTCCTAATGCTCCGTTAGACTGGTTTCTTTCTTTTGAACTTTGAGTGAAGCAAATTGTAATTTGCTGTGATGTTGGCAAGACTGGTCATTGGACTATTTGATCTGTCAATTTGGAAAGAAATCACAAGTGTTGATGTTTTAGAAATTAGAACTATAGATAGAATTGGGCTAAAACATTAGGTGAAGACTTTGTTATTTGGCCATATGAGCTGATGTTGCCATGTTGGCTTACAAAAGTATTTGTTCTTGCAAAATCTTAAAGCTACTATGATGACTTTCACTCTCTAATTACTGGAACCTATTGGATTTTAACTGTTTGTTCTTTTCCTTTATTTTTTTTTCCTTTTGAATTCTCTGGGGTAAAGTCTGTTTATATTCTACTTTACATTCTATTGGCCTCCCTAGACCTCACTTGTGGGATTGCACTGGGTATGTTGTTATTGTGATTTTTCTGTCAGTGGCTAACTTCTATACAGATCGTAGAAAGTTAAATTTTCAACCATTTTATTATTTCATTCTCAAAAAGAATAATTCATTCTCAAAAAAATTTATCACTTCGCTGTTGGTACTAATGATGGTTCTTTTCAGCAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTT</genome_strand>
        <mrna_strand>GAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG..................................................................................................................................................................................................................................................................................................GCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E436937" ref_strand="+" ref_description="SGN-E436937 [cSTA-1-L11]">
      <seq>gaaggaccgtgatcgtcatcacagagatcgtcatagggatcggagtgataggagggagaggaccagagatcgagatgaagatgatcttcagcgaactcgagattacgataggcgaagagacaacgacaaagatagagaggaccgacagagacacaagcctagctctaggggtagatccgagcatagatcaaggtctagatcacggtcgccatctaagagcaaaaggatcagtggttttgatatggcacctcctaccagtgcgttgttatctggcgctactgatgttgcaggccaagttccggggacgactaacccatcaattcctggaatgttttctaacatgtttcctctagcagcaggccagtttggagctctccctattatgccagtccaagcaatgacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="160863" stop="163497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="161163" g_stop="161273" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="161564" g_stop="161671" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="219" r_length="108" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.813" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="162327" g_stop="162397" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="290" r_length="71" r_score="0.958"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.986" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="163007" g_stop="163080" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="364" r_length="74" r_score="0.946"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="163081" i_stop="163157" i_length="77">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="163158" g_stop="163197" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="404" r_length="40" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E436937" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E436937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="161163" e_stop="161273"/>
          <exon e_start="161564" e_stop="161671"/>
          <exon e_start="162327" e_stop="162397"/>
          <exon e_start="163007" e_stop="163080"/>
          <exon e_start="163158" e_stop="163197"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAGGTGAGTTCAAATGCAGTTCTAAAAGTTAGTTGGATTCATGTTCTGTACCTCTTTTCAGGTACTCATGTATGATGATAATACATAATTGTGGTATTCATTTTAAGAATCATGTTTGATTTAATTTTGAAGTGCTGTTTTTTCTTTGTCACTGTTCTCTATGCTCGACATGCTTTAGTGTGAGCTTCATATGAGATTCACCATTCATGTGTTTGGTGCTTGCTGATTTAGTGTCTCAACCAATTTCTTATCTTTCTTATGTTCTTGTATATGATTGTTTATTTATCCCTCAGGCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAGGTTTGTCTTACTCCTATATCTTCTTGTAGGAGCATTATCAAGATACGTTTTATTGGTTATTTTTGATGTCCTAATGCTCCGTTAGACTGGTTTCTTTCTTTTGAACTTTGAGTGAAGCAAATTGTAATTTGCTGTGATGTTGGCAAGACTGGTCATTGGACTATTTGATCTGTCAATTTGGAAAGAAATCACAAGTGTTGATGTTTTAGAAATTAGAACTATAGATAGAATTGGGCTAAAACATTAGGTGAAGACTTTGTTATTTGGCCATATGAGCTGATGTTGCCATGTTGGCTTACAAAAGTATTTGTTCTTGCAAAATCTTAAAGCTACTATGATGACTTTCACTCTCTAATTACTGGAACCTATTGGATTTTAACTGTTTGTTCTTTTCCTTTATTTTTTTTTCCTTTTGAATTCTCTGGGGTAAAGTCTGTTTATATTCTACTTTACATTCTATTGGCCTCCCTAGACCTCACTTGTGGGATTGCACTGGGTATGTTGTTATTGTGATTTTTCTGTCAGTGGCTAACTTCTATACAGATCGTAGAAAGTTAAATTTTCAACCATTTTATTATTTCATTCTCAAAAAGAATAATTCATTCTCAAAAAAATTTATCACTTCGCTGTTGGTACTAATGATGGTTCTTTTCAGCAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACAC</genome_strand>
        <mrna_strand>GAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGACCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG..................................................................................................................................................................................................................................................................................................GCGAAGAGACAACGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCGCCATCTAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGATCAGTGGTTTTGATATGGCACCTCCTACCAGTGCGTTGTTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTTCCGGGGACGACTAACCCATCAATTCCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAG.............................................................................TTTGGAGCTCTCCCTATTATGCCAGTCCAAGCAATGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E269529" ref_strand="+" ref_description="SGN-E269529 [cLEM-2-E17]">
      <seq>agagatcgagatgaagatgatcttcagcgaactcgagattacgataggcgaagagacaatgacaaagatagagaggaccgacagagacacaagcctagctctaggggtagatccgagcatagatcaaggtctagatcacggtcaccatctaagagcaaaaggatcagtggttttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctctagcagcaggccagtttggagctctccctattatgccagtccaggcaatgacacagcaggctaccagacatgctcggcgagtttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="160927" stop="163615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="161227" g_stop="161273" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="161564" g_stop="161671" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="155" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.813" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="162327" g_stop="162397" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="226" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="163007" g_stop="163080" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="300" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="163081" i_stop="163157" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="163158" g_stop="163202" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="345" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="163289" g_stop="163315" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="372" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E269529" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="161227" e_stop="161273"/>
          <exon e_start="161564" e_stop="161671"/>
          <exon e_start="162327" e_stop="162397"/>
          <exon e_start="163007" e_stop="163080"/>
          <exon e_start="163158" e_stop="163202"/>
          <exon e_start="163289" e_stop="163315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAGGTGAGTTCAAATGCAGTTCTAAAAGTTAGTTGGATTCATGTTCTGTACCTCTTTTCAGGTACTCATGTATGATGATAATACATAATTGTGGTATTCATTTTAAGAATCATGTTTGATTTAATTTTGAAGTGCTGTTTTTTCTTTGTCACTGTTCTCTATGCTCGACATGCTTTAGTGTGAGCTTCATATGAGATTCACCATTCATGTGTTTGGTGCTTGCTGATTTAGTGTCTCAACCAATTTCTTATCTTTCTTATGTTCTTGTATATGATTGTTTATTTATCCCTCAGGCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAGGTTTGTCTTACTCCTATATCTTCTTGTAGGAGCATTATCAAGATACGTTTTATTGGTTATTTTTGATGTCCTAATGCTCCGTTAGACTGGTTTCTTTCTTTTGAACTTTGAGTGAAGCAAATTGTAATTTGCTGTGATGTTGGCAAGACTGGTCATTGGACTATTTGATCTGTCAATTTGGAAAGAAATCACAAGTGTTGATGTTTTAGAAATTAGAACTATAGATAGAATTGGGCTAAAACATTAGGTGAAGACTTTGTTATTTGGCCATATGAGCTGATGTTGCCATGTTGGCTTACAAAAGTATTTGTTCTTGCAAAATCTTAAAGCTACTATGATGACTTTCACTCTCTAATTACTGGAACCTATTGGATTTTAACTGTTTGTTCTTTTCCTTTATTTTTTTTTCCTTTTGAATTCTCTGGGGTAAAGTCTGTTTATATTCTACTTTACATTCTATTGGCCTCCCTAGACCTCACTTGTGGGATTGCACTGGGTATGTTGTTATTGTGATTTTTCTGTCAGTGGCTAACTTCTATACAGATCGTAGAAAGTTAAATTTTCAACCATTTTATTATTTCATTCTCAAAAAGAATAATTCATTCTCAAAAAAATTTATCACTTCGCTGTTGGTACTAATGATGGTTCTTTTCAGCAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAGGTTTATAATTTGTGACATTTCCTATTCTCTCTCGCTTATGGGCTTCTTTTACCTGAAAAGCATTTTATTAAATGTTGCTTTTTCAGGCTACCAGACATGCTCGGCGAGTTTAT</genome_strand>
        <mrna_strand>AGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG..................................................................................................................................................................................................................................................................................................GCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAG.............................................................................TTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG......................................................................................GCTACCAGACATGCTCGGCGAGTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550839" ref_strand="+" ref_description="SGN-E550839 [TUS-50-P21]">
      <seq>ttttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctctagcagcaggccaggtactgtgacagatccttcttagcataccttcactggttatctatattctcatatatttgttttgtggcttctctagtttggagctctccctattatgccagtccaggcaatgacacagcaggctaccagacatgctcggcgagtttatgttggtggacttccgcctactgcaaatgaacagtcggttgctaccttctttagtcatgtcatgtatgcaatcggaggaaatactgctggtccaggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatctgttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcggaccggttaaggttagaagacccagtgattacaatccttccttggcagctacacttggtcctaagtcaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="162042" stop="165103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="162342" g_stop="162397" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="163007" g_stop="163202" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="252" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="163289" g_stop="163348" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="312" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="164063" g_stop="164123" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="373" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="164212" g_stop="164324" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="486" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="164677" g_stop="164803" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="613" r_length="127" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E550839" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="162342" e_stop="162397"/>
          <exon e_start="163007" e_stop="163202"/>
          <exon e_start="163289" e_stop="163348"/>
          <exon e_start="164063" e_stop="164123"/>
          <exon e_start="164212" e_stop="164324"/>
          <exon e_start="164677" e_stop="164803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAGGTTTATAATTTGTGACATTTCCTATTCTCTCTCGCTTATGGGCTTCTTTTACCTGAAAAGCATTTTATTAAATGTTGCTTTTTCAGGCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAGGTAGCAAACTTCCTCCCATGACTTTGCACATTGGCTGTTCTAAGATTTTGTCTGCTCAAGTTTGGAAGCCGCTGTTGTCTTTCTAGTTATTCTTTGTGGAATCATTTTAGTTTTTCCTTCACAAGCTACTGCTTGTAATATGGTGCAATATAGTGTCTTCACGTACATTTTCACAGCTGTGTATTCCATCTAATTAACTTTTTGACATAAACACTAACACATAGCTTTTCTGATTTACTGATGTCGTGCAGTCTGAAACCATTTGTAGTTGTAGGTATTTTTGTGTTTTTTTGCTAGACATCTTTATATTTTCTTCTAAATATATGGAATTGCTGCATCTGATCCTATAGTCTTTCGGAAACAGCCTCTCTACCTCCACGAGGTAGTGGTAAGGTTTGCGTATATTCTACCCTCCCACACCCCACTTGTAGGATTTCAGCAGGTATGTTGTAGTTTTGGTTAGACCATTAATTCTTATGTTAGCATTTTTGAAATTTTATTCTCACGTGTGATGTTTCGTTCTCCATTGTAGTATTTTTTGTACTATGTCGGCCAAATTAGGCTTTTTTATGTGTCGTGTATGGAATCATCAAGTTTTGTCGTCCTCCAAAATTATCATTTGTTTGAGCTTCCTAATTTCATGATTTGGGTTAATTCTGCACTGCCATATTTTTGAGTACTTCCTATGTTTGCTGAAAGTTAATCTATATGCAGTCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAGGTTAGTTCATAGATTTATGTGGTTTTCCTTCTAGTATCACTATAAGTTTTCCTTTTTTAGGTGCTTAAAATATTGTTGAAATTTTCAGGGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAGGTACTAAAAATCATCTGATAGGTGTTTATATGTTAGCTTTCTACTTATGGTTGTAGGGTGTTCCTTGAAAACGAAGTAAAGAAAGAGAAGATTTTAGTTTCACCTCATTCACAGACTCTGATTCTCCCTATCTTGTTCGCCACCAGATAAAGTTTGGAACTAATGTCCCTTTGCCCCTTTCCCATTATATAATCTGGAGTCTGCAAACCCTGTCTTTCTGTGGTTTTTTATTTGTTTGTCTTCTTATGGTGATTTGTGGTGGTGGATAATGTATGACCAAAGCATCATGCTGCATTATGTCAAGTATTCTTATACATACATTTGTTTTCTGTGCACTTGATGTTTTGTTCAGGGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAG</genome_strand>
        <mrna_strand>TTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG......................................................................................GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG........................................................................................GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG................................................................................................................................................................................................................................................................................................................................................................GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAAGTCACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688564" ref_strand="+" ref_description="SGN-E688564 [t3_tus_50_p21]">
      <seq>ttttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctctagcagcaggccaggtactgtgacagatccttcttagcataccttcactggttatctatattctcatatatttgttttgtggcttctctagtttggagctctccctattatgccagtccaggcaatgacacagcaggctaccagacatgctcggcgagtttatgttggtggacttccgcctactgcaaatgaacagtcggttgctaccttctttagtcatgtcatgtatgcaatcggaggaaatactgctggtccaggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatctgttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcggaccggttaaggttagaagacccagtgattacaatccttccttggcagctacacttggtcctagtcaaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="162042" stop="165103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="162342" g_stop="162397" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="163007" g_stop="163202" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="252" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="163289" g_stop="163348" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="312" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="164063" g_stop="164123" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="373" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="164212" g_stop="164324" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="486" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="164677" g_stop="164803" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="613" r_length="127" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E688564" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="162342" e_stop="162397"/>
          <exon e_start="163007" e_stop="163202"/>
          <exon e_start="163289" e_stop="163348"/>
          <exon e_start="164063" e_stop="164123"/>
          <exon e_start="164212" e_stop="164324"/>
          <exon e_start="164677" e_stop="164803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAGGTTTATAATTTGTGACATTTCCTATTCTCTCTCGCTTATGGGCTTCTTTTACCTGAAAAGCATTTTATTAAATGTTGCTTTTTCAGGCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAGGTAGCAAACTTCCTCCCATGACTTTGCACATTGGCTGTTCTAAGATTTTGTCTGCTCAAGTTTGGAAGCCGCTGTTGTCTTTCTAGTTATTCTTTGTGGAATCATTTTAGTTTTTCCTTCACAAGCTACTGCTTGTAATATGGTGCAATATAGTGTCTTCACGTACATTTTCACAGCTGTGTATTCCATCTAATTAACTTTTTGACATAAACACTAACACATAGCTTTTCTGATTTACTGATGTCGTGCAGTCTGAAACCATTTGTAGTTGTAGGTATTTTTGTGTTTTTTTGCTAGACATCTTTATATTTTCTTCTAAATATATGGAATTGCTGCATCTGATCCTATAGTCTTTCGGAAACAGCCTCTCTACCTCCACGAGGTAGTGGTAAGGTTTGCGTATATTCTACCCTCCCACACCCCACTTGTAGGATTTCAGCAGGTATGTTGTAGTTTTGGTTAGACCATTAATTCTTATGTTAGCATTTTTGAAATTTTATTCTCACGTGTGATGTTTCGTTCTCCATTGTAGTATTTTTTGTACTATGTCGGCCAAATTAGGCTTTTTTATGTGTCGTGTATGGAATCATCAAGTTTTGTCGTCCTCCAAAATTATCATTTGTTTGAGCTTCCTAATTTCATGATTTGGGTTAATTCTGCACTGCCATATTTTTGAGTACTTCCTATGTTTGCTGAAAGTTAATCTATATGCAGTCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAGGTTAGTTCATAGATTTATGTGGTTTTCCTTCTAGTATCACTATAAGTTTTCCTTTTTTAGGTGCTTAAAATATTGTTGAAATTTTCAGGGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAGGTACTAAAAATCATCTGATAGGTGTTTATATGTTAGCTTTCTACTTATGGTTGTAGGGTGTTCCTTGAAAACGAAGTAAAGAAAGAGAAGATTTTAGTTTCACCTCATTCACAGACTCTGATTCTCCCTATCTTGTTCGCCACCAGATAAAGTTTGGAACTAATGTCCCTTTGCCCCTTTCCCATTATATAATCTGGAGTCTGCAAACCCTGTCTTTCTGTGGTTTTTTATTTGTTTGTCTTCTTATGGTGATTTGTGGTGGTGGATAATGTATGACCAAAGCATCATGCTGCATTATGTCAAGTATTCTTATACATACATTTGTTTTCTGTGCACTTGATGTTTTGTTCAGGGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAG</genome_strand>
        <mrna_strand>TTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG......................................................................................GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG........................................................................................GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG................................................................................................................................................................................................................................................................................................................................................................GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E210620" ref_strand="+" ref_description="SGN-E210620 [cLEC-68-A14]">
      <seq>tttgatatggcacctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctctagcagcaggccaggtactgtgacagatccttcttagcataccttcactggttatctatattctcatatatttgttttgtggcttctctagtttggagctctccctattatgccagtccaggcaatgacacagcaggctaccagacatgctcggcgagtttatgttggtggacttccgcctactgcaaatgaacagtcggttgctaccttctttagtcatgtcatgtatgcaatcggaggaaatactgctggtccaggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatctgttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcggaccggttaaggttagaagacccagtgattacaatccttccttggcagctacacttggtcctagtcaaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggagggcttgaaggacctgaccgtatattttgttggtggtttaccctattattttacagaatcacaaatcagggaacttttagagtcttttggtcaaacttcgaggatttgatctggtcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="162043" stop="165218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="162343" g_stop="162397" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="163007" g_stop="163202" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="251" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="163289" g_stop="163348" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="311" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="164063" g_stop="164123" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="372" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="164212" g_stop="164324" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="485" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="164677" g_stop="164918" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="729" r_length="244" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E210620" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210620" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="162343" e_stop="162397"/>
          <exon e_start="163007" e_stop="163202"/>
          <exon e_start="163289" e_stop="163348"/>
          <exon e_start="164063" e_stop="164123"/>
          <exon e_start="164212" e_stop="164324"/>
          <exon e_start="164677" e_stop="164918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAGGTTTATAATTTGTGACATTTCCTATTCTCTCTCGCTTATGGGCTTCTTTTACCTGAAAAGCATTTTATTAAATGTTGCTTTTTCAGGCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAGGTAGCAAACTTCCTCCCATGACTTTGCACATTGGCTGTTCTAAGATTTTGTCTGCTCAAGTTTGGAAGCCGCTGTTGTCTTTCTAGTTATTCTTTGTGGAATCATTTTAGTTTTTCCTTCACAAGCTACTGCTTGTAATATGGTGCAATATAGTGTCTTCACGTACATTTTCACAGCTGTGTATTCCATCTAATTAACTTTTTGACATAAACACTAACACATAGCTTTTCTGATTTACTGATGTCGTGCAGTCTGAAACCATTTGTAGTTGTAGGTATTTTTGTGTTTTTTTGCTAGACATCTTTATATTTTCTTCTAAATATATGGAATTGCTGCATCTGATCCTATAGTCTTTCGGAAACAGCCTCTCTACCTCCACGAGGTAGTGGTAAGGTTTGCGTATATTCTACCCTCCCACACCCCACTTGTAGGATTTCAGCAGGTATGTTGTAGTTTTGGTTAGACCATTAATTCTTATGTTAGCATTTTTGAAATTTTATTCTCACGTGTGATGTTTCGTTCTCCATTGTAGTATTTTTTGTACTATGTCGGCCAAATTAGGCTTTTTTATGTGTCGTGTATGGAATCATCAAGTTTTGTCGTCCTCCAAAATTATCATTTGTTTGAGCTTCCTAATTTCATGATTTGGGTTAATTCTGCACTGCCATATTTTTGAGTACTTCCTATGTTTGCTGAAAGTTAATCTATATGCAGTCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAGGTTAGTTCATAGATTTATGTGGTTTTCCTTCTAGTATCACTATAAGTTTTCCTTTTTTAGGTGCTTAAAATATTGTTGAAATTTTCAGGGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAGGTACTAAAAATCATCTGATAGGTGTTTATATGTTAGCTTTCTACTTATGGTTGTAGGGTGTTCCTTGAAAACGAAGTAAAGAAAGAGAAGATTTTAGTTTCACCTCATTCACAGACTCTGATTCTCCCTATCTTGTTCGCCACCAGATAAAGTTTGGAACTAATGTCCCTTTGCCCCTTTCCCATTATATAATCTGGAGTCTGCAAACCCTGTCTTTCTGTGGTTTTTTATTTGTTTGTCTTCTTATGGTGATTTGTGGTGGTGGATAATGTATGACCAAAGCATCATGCTGCATTATGTCAAGTATTCTTATACATACATTTGTTTTCTGTGCACTTGATGTTTTGTTCAGGGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATA-TTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTC-AACTTCGAGGATTTGATCTGGTCAA</genome_strand>
        <mrna_strand>TTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG......................................................................................GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG........................................................................................GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG................................................................................................................................................................................................................................................................................................................................................................GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAAACTTCGAGGATTTGATCTGGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E347514" ref_strand="+" ref_description="SGN-E347514 [cTOF-33-P20]">
      <seq>ctcccaccagtgcattgctatctggcgctactgatgttgcaggtcaagttcctgggaccactaacccatcaatacctggaatgttttctaacatgtttcctctagcagcaggccagtttggagctctccctattatgccagtccaggcaatgacacagcaggctaccagacatgctcggcgagtttatgttggtggacttccgcctactgcaaatgaacagtcggttgctaccttctttagtcatgtcatgtatgcaatcggaggaaatactgctggtccaggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatctgttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcggaccggttaaggttagaagacccagtgattacaatccttccttggcagctacacttggtcctagtcaaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggagggcttgaaggacctgaccgtatatttgttgggtggtttaccctattattttacagaatcacaaatcagggaacttttagagtcttttggtcaacttcgaggatttgatctggtcaaagatagagaaactgggaattcaaaaggttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="162056" stop="165251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="162356" g_stop="162397" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="163007" g_stop="163080" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="116" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="163081" i_stop="163157" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="163158" g_stop="163202" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="161" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="163289" g_stop="163348" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="221" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="164063" g_stop="164123" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="282" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="164212" g_stop="164324" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="395" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="164677" g_stop="164951" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="671" r_length="276" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E347514" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="162356" e_stop="162397"/>
          <exon e_start="163007" e_stop="163080"/>
          <exon e_start="163158" e_stop="163202"/>
          <exon e_start="163289" e_stop="163348"/>
          <exon e_start="164063" e_stop="164123"/>
          <exon e_start="164212" e_stop="164324"/>
          <exon e_start="164677" e_stop="164951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAGGTACACGGTCCATCAATTTCATTACAATTTAAGTATCTTGAAAACTGTCATGTTTTTCCTGGACATAGTGTGGAAGTTCGTATCGAAATGCATGGTTACATTTTGGTAAGCTTTTTGTTTCTTTGACTTCCACCTATACTAGTAGCGAGTCCTAGTTAGATTAGCTCTTTTGCTTTTCTTTACTTTTTACTTGGTGAAATAATTCTGAGACTGAGGGTTTTGGTTTCTTGTTGTGTTTGGTGTTTGTTTGTTTGTTTTGTATTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAGGTTTATAATTTGTGACATTTCCTATTCTCTCTCGCTTATGGGCTTCTTTTACCTGAAAAGCATTTTATTAAATGTTGCTTTTTCAGGCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAGGTAGCAAACTTCCTCCCATGACTTTGCACATTGGCTGTTCTAAGATTTTGTCTGCTCAAGTTTGGAAGCCGCTGTTGTCTTTCTAGTTATTCTTTGTGGAATCATTTTAGTTTTTCCTTCACAAGCTACTGCTTGTAATATGGTGCAATATAGTGTCTTCACGTACATTTTCACAGCTGTGTATTCCATCTAATTAACTTTTTGACATAAACACTAACACATAGCTTTTCTGATTTACTGATGTCGTGCAGTCTGAAACCATTTGTAGTTGTAGGTATTTTTGTGTTTTTTTGCTAGACATCTTTATATTTTCTTCTAAATATATGGAATTGCTGCATCTGATCCTATAGTCTTTCGGAAACAGCCTCTCTACCTCCACGAGGTAGTGGTAAGGTTTGCGTATATTCTACCCTCCCACACCCCACTTGTAGGATTTCAGCAGGTATGTTGTAGTTTTGGTTAGACCATTAATTCTTATGTTAGCATTTTTGAAATTTTATTCTCACGTGTGATGTTTCGTTCTCCATTGTAGTATTTTTTGTACTATGTCGGCCAAATTAGGCTTTTTTATGTGTCGTGTATGGAATCATCAAGTTTTGTCGTCCTCCAAAATTATCATTTGTTTGAGCTTCCTAATTTCATGATTTGGGTTAATTCTGCACTGCCATATTTTTGAGTACTTCCTATGTTTGCTGAAAGTTAATCTATATGCAGTCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAGGTTAGTTCATAGATTTATGTGGTTTTCCTTCTAGTATCACTATAAGTTTTCCTTTTTTAGGTGCTTAAAATATTGTTGAAATTTTCAGGGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAGGTACTAAAAATCATCTGATAGGTGTTTATATGTTAGCTTTCTACTTATGGTTGTAGGGTGTTCCTTGAAAACGAAGTAAAGAAAGAGAAGATTTTAGTTTCACCTCATTCACAGACTCTGATTCTCCCTATCTTGTTCGCCACCAGATAAAGTTTGGAACTAATGTCCCTTTGCCCCTTTCCCATTATATAATCTGGAGTCTGCAAACCCTGTCTTTCTGTGGTTTTTTATTTGTTTGTCTTCTTATGGTGATTTGTGGTGGTGGATAATGTATGACCAAAGCATCATGCTGCATTATGTCAAGTATTCTTATACATACATTTGTTTTCTGTGCACTTGATGTTTTGTTCAGGGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTT-GGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGC</genome_strand>
        <mrna_strand>CTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAG.............................................................................TTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG......................................................................................GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG........................................................................................GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG................................................................................................................................................................................................................................................................................................................................................................GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E596475" ref_strand="+" ref_description="SGN-E596475 [39958]">
      <seq>gttctaagaaggcaatgttgggctacttgccccactgtgctgacaatgggcgtgagccgacttctgtagcttatatgtacaaggaagaatcgatacaggtcaagttccggggacgactaacccatcaattcctggaatgttttctaacatgtttcctctagcagcaggccagtttggagctctccctattatgccagtccaggcaatgacacagcaggctaccagacatgctcggcgagtttatgttggtggacttccacctactgcaaatgaacagtcggttgctaccttctttagtcatgtcatgtatgcaatcggaggaaacactgctggtccaggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatctgttgaggaagctagtaatgccatggctttggatggtgtcatttttgagggcggaccagttaaggttagaagacccagtgattacaatccttccttggcagctactcttggtcctagtcaaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggagggcttgaaggacctgaccgtatatttgttggtggtttgccctattattttacagaatcacaaatcagggaacttttagagtcttttggtcaacttcgaggatttgatctggtcaaagatagagaaactggggaactcaaaaggttatgctttttgtgtgtaccaggatgtgtctgttactgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="162368" stop="165286"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="162668" g_stop="162765" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="162766" i_stop="163006" i_length="241">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="163007" g_stop="163080" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="172" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="163081" i_stop="163157" i_length="77">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="163158" g_stop="163202" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="217" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="163289" g_stop="163348" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="277" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.916" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="164063" g_stop="164123" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="338" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="164212" g_stop="164324" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="451" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="164677" g_stop="164986" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="762" r_length="311" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E596475" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E596475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="162668" e_stop="162765"/>
          <exon e_start="163007" e_stop="163080"/>
          <exon e_start="163158" e_stop="163202"/>
          <exon e_start="163289" e_stop="163348"/>
          <exon e_start="164063" e_stop="164123"/>
          <exon e_start="164212" e_stop="164324"/>
          <exon e_start="164677" e_stop="164986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAGGTCTTGTTCATCTTCAAGGAATTGCTAGTTTGGTAGTTTACAAATATTTTCTCTAGTAATGAATTCACATTAAAATTCTCCATTCCTAAAATTGTTTTACTTCAATTTGATTACAAACTCTTCTATTTTTTCAAATACATCGAAAGACAAAAAAGATTTTAGTGTAAATATCCATTTATTTTAGCCACTTGAAGTATGTATGTATTTTCACTCACTGATTTGTAATTTACATGCCGCGCAGGTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAGGTTTATAATTTGTGACATTTCCTATTCTCTCTCGCTTATGGGCTTCTTTTACCTGAAAAGCATTTTATTAAATGTTGCTTTTTCAGGCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAGGTAGCAAACTTCCTCCCATGACTTTGCACATTGGCTGTTCTAAGATTTTGTCTGCTCAAGTTTGGAAGCCGCTGTTGTCTTTCTAGTTATTCTTTGTGGAATCATTTTAGTTTTTCCTTCACAAGCTACTGCTTGTAATATGGTGCAATATAGTGTCTTCACGTACATTTTCACAGCTGTGTATTCCATCTAATTAACTTTTTGACATAAACACTAACACATAGCTTTTCTGATTTACTGATGTCGTGCAGTCTGAAACCATTTGTAGTTGTAGGTATTTTTGTGTTTTTTTGCTAGACATCTTTATATTTTCTTCTAAATATATGGAATTGCTGCATCTGATCCTATAGTCTTTCGGAAACAGCCTCTCTACCTCCACGAGGTAGTGGTAAGGTTTGCGTATATTCTACCCTCCCACACCCCACTTGTAGGATTTCAGCAGGTATGTTGTAGTTTTGGTTAGACCATTAATTCTTATGTTAGCATTTTTGAAATTTTATTCTCACGTGTGATGTTTCGTTCTCCATTGTAGTATTTTTTGTACTATGTCGGCCAAATTAGGCTTTTTTATGTGTCGTGTATGGAATCATCAAGTTTTGTCGTCCTCCAAAATTATCATTTGTTTGAGCTTCCTAATTTCATGATTTGGGTTAATTCTGCACTGCCATATTTTTGAGTACTTCCTATGTTTGCTGAAAGTTAATCTATATGCAGTCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAGGTTAGTTCATAGATTTATGTGGTTTTCCTTCTAGTATCACTATAAGTTTTCCTTTTTTAGGTGCTTAAAATATTGTTGAAATTTTCAGGGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAGGTACTAAAAATCATCTGATAGGTGTTTATATGTTAGCTTTCTACTTATGGTTGTAGGGTGTTCCTTGAAAACGAAGTAAAGAAAGAGAAGATTTTAGTTTCACCTCATTCACAGACTCTGATTCTCCCTATCTTGTTCGCCACCAGATAAAGTTTGGAACTAATGTCCCTTTGCCCCTTTCCCATTATATAATCTGGAGTCTGCAAACCCTGTCTTTCTGTGGTTTTTTATTTGTTTGTCTTCTTATGGTGATTTGTGGTGGTGGATAATGTATGACCAAAGCATCATGCTGCATTATGTCAAGTATTCTTATACATACATTTGTTTTCTGTGCACTTGATGTTTTGTTCAGGGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACT-GGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATA</genome_strand>
        <mrna_strand>GTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAG.................................................................................................................................................................................................................................................GTCAAGTTCCGGGGACGACTAACCCATCAATTCCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAG.............................................................................TTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG......................................................................................GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCACCTACTGCAAATGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAACACTGCTGGTCCAG........................................................................................GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCCATGGCTTTGGATGGTGTCATTTTTGAG................................................................................................................................................................................................................................................................................................................................................................GGCGGACCAGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACTCTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTGCCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGGAACTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTGTCTGTTACTGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E705465" ref_strand="+" ref_description="SGN-E705465 [FA27AH11]">
      <seq>ccttctttagtcatgtcatgtatgcaatcggaggaaatactgctggtccaggggatgctgttgtcaacgtttatataaaccatgagaagaagtttgcctttgttgaaatgagatctgttgaggaagctagtaatgcaatggctttggatggtgtcatttttgagggcggaccggttaaggttagaagacccagtgattacaatccttccttggcagctacacttggtcctagtcaaccgagccccaacctcaacctggcagctgttggattgacaccaggttcttccggagggcttgaaggacctgaccgtatatttgttggtggtttaccctattattttacagaatcacaaatcagggaacttttagagtcttttggtcaacttcgaggatttgatctggtcaaagatagagaaactgggaattcaaaaggttatgctttttgtgtgtaccaggatgtctctgttactgatattgcttgtgcagctcttaatgggattaagatgggggataaaactcttactgttaggcgggctaaccagggcacaacccaacccaaccctgagcaagagagtgtattgttgcatgcacaacagcagatagctttgcagaggttcatgttacaacctggtgcattagccacaaaggttttgtgcttgacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggcgagcctacacctggactcggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="163773" stop="165834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164073" g_stop="164123" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="164212" g_stop="164324" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="164" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="164677" g_stop="165123" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="611" r_length="447" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="165230" g_stop="165365" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="747" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="165470" g_stop="165534" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="748" r_stop="812" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E705465" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="164073" e_stop="164123"/>
          <exon e_start="164212" e_stop="164324"/>
          <exon e_start="164677" e_stop="165123"/>
          <exon e_start="165230" e_stop="165365"/>
          <exon e_start="165470" e_stop="165534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAGGTTAGTTCATAGATTTATGTGGTTTTCCTTCTAGTATCACTATAAGTTTTCCTTTTTTAGGTGCTTAAAATATTGTTGAAATTTTCAGGGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAGGTACTAAAAATCATCTGATAGGTGTTTATATGTTAGCTTTCTACTTATGGTTGTAGGGTGTTCCTTGAAAACGAAGTAAAGAAAGAGAAGATTTTAGTTTCACCTCATTCACAGACTCTGATTCTCCCTATCTTGTTCGCCACCAGATAAAGTTTGGAACTAATGTCCCTTTGCCCCTTTCCCATTATATAATCTGGAGTCTGCAAACCCTGTCTTTCTGTGGTTTTTTATTTGTTTGTCTTCTTATGGTGATTTGTGGTGGTGGATAATGTATGACCAAAGCATCATGCTGCATTATGTCAAGTATTCTTATACATACATTTGTTTTCTGTGCACTTGATGTTTTGTTCAGGGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAGGTAGAGATACTTCTATGCTCTTCCATTCAGTTTTCAAGTTCTTAGGCTTTAACACTTTTATAAAAAGGACTTTCAAGCTCACCCTTAGTGTTTTTTTCTTCTACAGAGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGG</genome_strand>
        <mrna_strand>CCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG........................................................................................GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG................................................................................................................................................................................................................................................................................................................................................................GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAG..........................................................................................................AGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E400443" ref_strand="+" ref_description="SGN-E400443 [cSTC-9-D6]">
      <seq>ccgtatatttgttggtggtttgccctattattttacagaatcacaaatcagggaacttttagagtcttttggtcaacttcgaggatttgatctggtcaaagatagagaaactgggaactcaaaaggttatgctttttgtgtgtaccaggatgtgtctgttactgatattgcttgtgcagcccttaatgggattaagatgggggataaaactcttactgttaggcgggctaaccagggcacaacccaacccaaccctgagcaagagagtgtattattgcatgcacaacagcagatagctttgcagagattcatgttacaacctggtgcattatccacgaaggttttgtgcttaacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagatattttggaagatatgaggattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="164520" stop="165652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164820" g_stop="165123" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.815" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165230" g_stop="165352" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="427" r_length="123" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E400443" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="164820" e_stop="165123"/>
          <exon e_start="165230" e_stop="165352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAGGTAGAGATACTTCTATGCTCTTCCATTCAGTTTTCAAGTTCTTAGGCTTTAACACTTTTATAAAAAGGACTTTCAAGCTCACCCTTAGTGTTTTTTTCTTCTACAGAGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAA</genome_strand>
        <mrna_strand>CCGTATATTTGTTGGTGGTTTGCCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAACTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTGTCTGTTACTGATATTGCTTGTGCAGCCCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTATTGCATGCACAACAGCAGATAGCTTTGCAG..........................................................................................................AGATTCATGTTACAACCTGGTGCATTATCCACGAAGGTTTTGTGCTTAACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E423257" ref_strand="-" ref_description="SGN-E423257 [STM-41-B22]">
      <seq>tatatttgttggtggtttgccctattattttacagaatcacaaatcagggaacttttagagtcttttggtcaacttcgaggatttngatctggtcaaagatagagaaactgggaactcaaaaggttatgctttttgtgtgtaccaggatgtgtctgttactgatattgcttgtgcagcccttaatgggattaagatgggggataaaactcttactgttaggcgggctaaccagggcacaacccaaccccaaccctgagcaagagagtgtattattgcatgcacaacagcagatagctttgcagagattcatgttacaacctggtgcattagccacgaaggttttgtgcttaacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggtgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcggcaagggctgaatggaagaaaatttggtggtaaccaagttgttgccgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaatcactatagctatgacatactattcagattactacagggagttgtttgcaatgtcttgtaggaattatatcccccttttgacaaagagggattaaagtctcctgtttctttttctgttttttttgcttttttgttttggtgagcatgggatattttattctggatttcaaatttagtttgtggttaaagctgatgtaaagtatcaaacaatgtaaattattgggttgtttgaatgcgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="164523" stop="166482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164823" g_stop="165123" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.815" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165230" g_stop="165365" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="439" r_length="136" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="507" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="165842" g_stop="166216" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="892" r_length="385" r_score="0.872"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E423257" ref_strand="-">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>880</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423257" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="164823" e_stop="165123"/>
          <exon e_start="165230" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTT-GATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAA-CCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAGGTAGAGATACTTCTATGCTCTTCCATTCAGTTTTCAAGTTCTTAGGCTTTAACACTTTTATAAAAAGGACTTTCAAGCTCACCCTTAGTGTTTTTTTCTTCTACAGAGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGC-ATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGA-TTATT--AGTGTCCTG--TC--TTT-T-TTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGA-TT-AAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGAATGTCTTTT</genome_strand>
        <mrna_strand>TATATTTGTTGGTGGTTTGCCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTNGATCTGGTCAAAGATAGAGAAACTGGGAACTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTGTCTGTTACTGATATTGCTTGTGCAGCCCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCCAACCCTGAGCAAGAGAGTGTATTATTGCATGCACAACAGCAGATAGCTTTGCAG..........................................................................................................AGATTCATGTTACAACCTGGTGCATTAGCCACGAAGGTTTTGTGCTTAACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGTGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGGCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTGTTGCCGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAATCACTATAGCTATGACATACTATTCAGATTACTACAGGGAGTTGTTTGCAATGTCTTGTAGGAATTATATCCCCCTTTTGACAAAGAGGGATTAAAGTCTCCTGTTTCTTTTTCTGTTTTTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTTCAAATTTAGTTTGTGGTTAAAGCTGATGTAAAGTATCAAACA-ATGTA-AATTATTGGGTTGTTTGAATGCGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E558300" ref_strand="+" ref_description="SGN-E558300 [17619]">
      <seq>tctggtcaagatagagaaactgggaactcaaaaggttatgctttttgtgtgtaccaggatgtgtctgttactgatattgcttgtgcagcccttaatgggattaagatgggggataaaactcttactgttaggcgggctaaccagggcacaacccaatccaaccctgacaagagagtgtattattgcatgcacaacagcagatagctttgcagagattcatgttacaacctggtgcattagccacgaaggttttgtgcttaacagaagtggttagcgtagaaagctcaaagatgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacggtccaaatcctaagtggtgagcctacacctggtactcgggaaggtattcctggagtatgcagatgttgacagttccagcagagctcggcaagggctgaatggaagaaaatttggtggtaaccaagttgttgccgtcttctatccagagaacaagttctctgaggagattacgaggttaactgtaatcactatagctatgacatactattcagattactacagggagttgtttgcaatgtcttgtagggaattatatcccccttttgacaaagaaggattaaagtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="164610" stop="166371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164910" g_stop="165123" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.815" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165230" g_stop="165365" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="347" r_length="135" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="418" r_length="71" r_score="0.897"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="0.85"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="165842" g_stop="166083" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="661" r_length="243" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E558300" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E558300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="164910" e_stop="165123"/>
          <exon e_start="165230" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAGGTAGAGATACTTCTATGCTCTTCCATTCAGTTTTCAAGTTCTTAGGCTTTAACACTTTTATAAAAAGGACTTTCAAGCTCACCCTTAGTGTTTTTTTCTTCTACAGAGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCAC-GTCCAAATCCTAA-TGGCGAGCCTACACCTGG-ACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGC-ATGTCCTATA-GGAATTATATCCCCCTTTTGACAAAG-ATTATTAGTGTCC</genome_strand>
        <mrna_strand>TCTGGTC-AAGATAGAGAAACTGGGAACTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTGTCTGTTACTGATATTGCTTGTGCAGCCCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAATCCAACCCTGA-CAAGAGAGTGTATTATTGCATGCACAACAGCAGATAGCTTTGCAG..........................................................................................................AGATTCATGTTACAACCTGGTGCATTAGCCACGAAGGTTTTGTGCTTAACAGAAGTGGTTAGCGTAGA-AAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGGTCCAAATCCTAAGTGGTGAGCCTACACCTGGTACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAGAGCTCGGCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTGTTGCCGTCTTCTATCCAGAGAACAAGTTCTCTGA-GGAGATTACGAGG-TTAACTGTAATCACTATAGCTATGACATACTATTCAGATTACTACAGGGAGTTGTTTGCAATGTCTTGTAGGGAATTATATCCCCCTTTTGACAAAGAAGGATTAAAGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E577139" ref_strand="-" ref_description="SGN-E577139 [33112]">
      <seq>gtgtgtaccaggaggtgtctgtactgatattgcttgtgcagcccnttaatgggattaagatggggggataaaactcttactgttagcgggctaaccagggcacaacccaacccaaccctgagcaagagagtgtattattgcatgcacaacagcagatagctttgcagagattcatgttacaacctggtgcattagccacgaaggttttgtgcttaacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggtgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcggcaagggctgaatggaagaaaatttggtggtaaccaagttgttgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaatcactatagctatgacatactattcagattactacagggagttgtttgcaatgtcttgtaggaattatatcccccttttgacaaagagggattaaagtctcctgtttctttttcttttttttttgcttttttgttttggtgagcatgggatattttattctggatttcaaatttagtttgtggttaaagctgatgtaaagtatcaaacaggaatagttattgggttgtttgaatgcgtttttttctttttataattatggctagtacccatttttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="164657" stop="166549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164957" g_stop="165123" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.815" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165230" g_stop="165365" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="303" r_length="136" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="371" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="165842" g_stop="166236" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="777" r_length="406" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E577139" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577139" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="164957" e_stop="165123"/>
          <exon e_start="165230" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTC-TTAATGGGATTAAGAT-GGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAGGTAGAGATACTTCTATGCTCTTCCATTCAGTTTTCAAGTTCTTAGGCTTTAACACTTTTATAAAAAGGACTTTCAAGCTCACCCTTAGTGTTTTTTTCTTCTACAGAGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGC-ATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGA-TTATT--AGTGTCCTG--TC---TT-TTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGA-TT-AAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGAATG-TCTTTTTTCTTTTTATAATTATGGCT</genome_strand>
        <mrna_strand>GTGTGTACCAGGAGGTGTCTG-TACTGATATTGCTTGTGCAGCCCNTTAATGGGATTAAGATGGGGGGATAAAACTCTTACTGTTA-GCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTATTGCATGCACAACAGCAGATAGCTTTGCAG..........................................................................................................AGATTCATGTTACAACCTGGTGCATTAGCCACGAAGGTTTTGTGCTTAACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGTGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGGCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTGTTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAATCACTATAGCTATGACATACTATTCAGATTACTACAGGGAGTTGTTTGCAATGTCTTGTAGGAATTATATCCCCCTTTTGACAAAGAGGGATTAAAGTCTCCTGTTTCTTTTTCTTTTTTTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTTCAAATTTAGTTTGTGGTTAAAGCTGATGTAAAGTATCAAACAGGAATA--GTTATTGGGTTGTTTGAATGCGTTTTTTTCTTTTTATAATTATGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E572245" ref_strand="-" ref_description="SGN-E572245 [31368]">
      <seq>gtgtacccaggatgtgtctgttactgatattgcttgtgcagcccttaatgggattaagatgggggataaaactcttactgttaggcgggctaaccagggcacaacccaacccaaccctgagcaagagagtgtattattgcatgcacaacagcagatagctttgcagagattcatgttacaacctggtgcattagccacgaaggttttgtgcttaacagaagtggttagcgtagatgagctcaaagatgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggtgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcggcaagggctgaatggaagaaaatttggtggtaaccaagttgttgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaatcactatagctatgacatactattcagattactacagggagttgtttgcaatgtcttgtaggaattatatcccccttttgacaaagagggattaaagtctcctgtttctttttctttttttttgcttttttgttttggtgagcatgggatattttattctggatttcaaatttagtttgtggttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="164659" stop="166461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="164959" g_stop="165123" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.815" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165230" g_stop="165365" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="302" r_length="136" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="370" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="165842" g_stop="166161" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="701" r_length="331" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E572245" ref_strand="-">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572245" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="164959" e_stop="165123"/>
          <exon e_start="165230" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTA-CCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAGGTAGAGATACTTCTATGCTCTTCCATTCAGTTTTCAAGTTCTTAGGCTTTAACACTTTTATAAAAAGGACTTTCAAGCTCACCCTTAGTGTTTTTTTCTTCTACAGAGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGC-ATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGA-TTATT--AGTGTCCTG--TC--TTT-TTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGA-TT-AAATTTAGTTTGTGGTTAAA</genome_strand>
        <mrna_strand>GTGTACCCAGGATGTGTCTGTTACTGATATTGCTTGTGCAGCCCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTATTGCATGCACAACAGCAGATAGCTTTGCAG..........................................................................................................AGATTCATGTTACAACCTGGTGCATTAGCCACGAAGGTTTTGTGCTTAACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGTGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGGCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTGTTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAATCACTATAGCTATGACATACTATTCAGATTACTACAGGGAGTTGTTTGCAATGTCTTGTAGGAATTATATCCCCCTTTTGACAAAGAGGGATTAAAGTCTCCTGTTTCTTTTTCTTTTTTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTTCAAATTTAGTTTGTGGTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E548172" ref_strand="+" ref_description="SGN-E548172 [TUS-58-L24]">
      <seq>tgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggcgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggtaaccaagttattgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaaccactatagctgtgacataatattcagattattacagggagttgtttgcatgtcctataggaattatatcccccttttgacaaagattattagtgtcctgtctttttttcttttgcttttttgttttggtgagcatgggatattttattctggattaaatttagtttgtggttaaagctggtgtaaagtatcaaacaggaatagtgttatcggngttgtttgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="165010" stop="166508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="165310" g_stop="165365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="124" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165842" g_stop="166207" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="491" r_length="367" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="492" polyA_stop="501"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E548172" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="165310" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGG-GTTGTTTGA</genome_strand>
        <mrna_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGNGTTGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539759" ref_strand="+" ref_description="SGN-E539759 [TUS-59-K23]">
      <seq>tgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggcgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggtaaccaagttattgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaaccactatagctgtgacataatattcagattattacagggagttgtttgcatgtcctataggaattatatcccccttttgacaaagattattagtgtcctgtctttttttcttttgcttttttgttttggtgagcatgggatattttattctggattaaatttagtttgtggttaaagctggtgtaaagtatcaaacaggaatagtgttatcgggttgtttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="165010" stop="166508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="165310" g_stop="165365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="124" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165842" g_stop="166207" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="490" r_length="366" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E539759" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="165310" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGA</genome_strand>
        <mrna_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539140" ref_strand="+" ref_description="SGN-E539140 [TUS-58-L24](-)">
      <seq>tgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggcgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggtaaccaagttattgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaaccactatagctgtgacataatattcagattattacagggagttgtttgcatgtcctataggaattatatcccccttttgacaaagattattagtgtcctgtctttttttcttttgcttttttgttttggtgagcatgggatattttattctggattaaatttagtttgtggttaaagctggtgtaaagtatcaaacaggacatagtgttatcgggttgttgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="165010" stop="166508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="165310" g_stop="165365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="124" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165842" g_stop="166201" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="485" r_length="361" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="490" polyA_stop="500"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E539140" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="165310" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGA-ATAGTGTTATCGGGTT</genome_strand>
        <mrna_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGACATAGTGTTATCGGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539757" ref_strand="+" ref_description="SGN-E539757 [TUS-59-K23](-)">
      <seq>tgatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggcgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggtaaccaagttattgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaaccactatagctgtgacataatattcagattattacagggagttgtttgcatgtcctataggaattatatcccccttttgacaaagattattagtgtcctgtctttttttcttttgcttttttgttttggtgagcatgggatattttattctggattaaatttagtttgtggttaaagctggtgtaaagtatcaaacaggaatagtgttatcgggttgttgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="165010" stop="166508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="165310" g_stop="165365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="124" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165842" g_stop="166201" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="484" r_length="360" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="489" polyA_stop="499"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E539757" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="165310" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTT</genome_strand>
        <mrna_strand>TGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E279916" ref_strand="+" ref_description="SGN-E279916 [cLER-8-E18]">
      <seq>gatgatgactatcaagatattttggaagatatgaggattgaatgtggtaaatttggagctctcctgaatgttgtcattccacgtccaaatcctaatggcgagcctacacctggactcgggaaggtattcctggagtatgcagatgttgacagttccagcaaagctcgccaagggctgaatggaagaaaatttggtggtaaccaagttattgctgtcttctatccagagaacaagttctctgagggagattacgaggcttaactgtaaccactatagctgtgacataatattcagattattacagggagttgtttgcatgtcctataggaattatatcccccttttgacaaagattattagtgtcctgtctttttttcttttgcttttttgttttggtgagcatgggatattttattctggattaaatttagtttgtggttaaagctggtgtaaagtatcaaacaggaatagtgttatcgggttgtttgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="165011" stop="166508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="165311" g_stop="165365" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104">
            <donor d_prob="0.766" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="165470" g_stop="165537" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="123" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165842" g_stop="166207" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="489" r_length="366" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="490" polyA_stop="499"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E279916" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="165311" e_stop="165365"/>
          <exon e_start="165470" e_stop="165537"/>
          <exon e_start="165842" e_stop="166207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTGGTGAGTAGCCATATCTAGTGTTCTGTTTCCTCTAGCATACCTTATGCCTTGAACTTAGGTTGAGAATTTTAACTTGTATTTGCTTTTGTATGTCTACTTTGCAGGAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAGGTACATGTCTGCTGATCTGTTGAGTCATCATCTAGATTAGTTACGTCTACAATCTGATCTTGACGTTCCTATATATGTTTGTTAAAATGAGATTCAACTTGTTTCTAATTTTCTTCACAATGACCAGCTGAAAAATGACTATTCTGTTAAGTGTCTTTCACTACGATTATTTATTGCTTCCTTAAACTGTTTGTGCATGGTTTGGAACAATTACAAAAGGGCTCCAATACCTTGCTCTTTTTTTTTTCTGGTGGTTTCTACTTCTGAATGTACAATGGTTAAGACTTGTATCCTGGTTCTTCAGGTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGA</genome_strand>
        <mrna_strand>GATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG........................................................................................................GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG................................................................................................................................................................................................................................................................................................................GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318077" ref_strand="+" ref_description="SGN-E318077 [cTOA-29-G4]">
      <seq>ttttcacattaaatttcctctctttctctctattgatttccgagccgccgacttgcgttgtcacaactgcttctcattttcatcgagtttttcttcattacttttacttataagcaaacccatttactcgaacttagcgactttcccggcagaaagttcacgccggtgattgactttctggtgattttggaatctgggtttttcagctaatttctatgttatggggatttgctattttagcttggtttgatcaaaactggtagttgggtgtatgaaagaaagaaaaacgaaaaagcaagattgactggtagatacggcgaaaagagagaaagtattgactcccccaagaaaagattgatatcaaaaaggtttttttaacataaatgttctaaagatttgcttttttgagcaacccccccccccaaaaaaaaaaaaaaaaaacatgccggccgacccagataactcatccgccatgaacgattctacaggctcaggtgaagcaagcgtttcgtcttcaggtaatcaagtagttcctctgaaagaatcagccaagaagaaacggaatcttcctgggatgccagatttgattttctgtttttggttgctttgattagatcccgatgcagaggttattgctttgtcaccaacaactttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="170461" stop="171776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="170761" g_stop="171341" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="171342" i_stop="171399" i_length="58">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="171400" g_stop="171476" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="658" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E318077" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="170761" e_stop="171341"/>
          <exon e_start="171400" e_stop="171476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCACATTAAATTTCCTCTCTTTCTCTCTATTGATTTCCGAGCCGCCGACTTGCGTTGTCACAACTGCTTCTCATTTTCATCGAGTTTTTCTTCATTACTTTTACTTATAAGCAAACCCATTTACTCGAACTTAGCGACTTTCCCGGCAGAAAGTTCACGCCGGTGATTGACTTTCTGGTGATTTTGGAATCTGGGTTTTTCAGCTAATTTCTATGTTATGGGGATTTGCTATTTTAGCTTGGTTTGATCAAAACTGGTAGTTGGGTGTATGAAAGAAAGAAAAACGAAAAAGCAAGATTGACTGGTAGATACGGCGAAAAGAGAGAAAGTATTGACTCCCCCAAGAAAAGATTGATATCAAAAAGGTTTTTTTAACATAAATGTTCTAAAGATTTGCTTTTTTGAGCAACCCCCCCCCCCCAAAAAAAAAAAAAAAAACATGCCGGCCGACCCAGATAACTCATCCGCCATGAACGATTCTACAGGCTCAGGTGAAGCAAGCGTTTCGTCTTCAGGTAATCAAGTAGTTCCTCTGAAAGAATCAGCCAAGAAGAAACGGAATCTTCCTGGGATGCCAGGTAAATCATGTTCCGTTACGATTCTTGATGAACCCAATTTTACTAATATTCAGCGAAGATTTGATTTTCTGTTTTTGGTTGCTTTGATTAGATCCCGATGCAGAGGTTATTGCTTTGTCACCAACAACTTTGCTG</genome_strand>
        <mrna_strand>TTTTCACATTAAATTTCCTCTCTTTCTCTCTATTGATTTCCGAGCCGCCGACTTGCGTTGTCACAACTGCTTCTCATTTTCATCGAGTTTTTCTTCATTACTTTTACTTATAAGCAAACCCATTTACTCGAACTTAGCGACTTTCCCGGCAGAAAGTTCACGCCGGTGATTGACTTTCTGGTGATTTTGGAATCTGGGTTTTTCAGCTAATTTCTATGTTATGGGGATTTGCTATTTTAGCTTGGTTTGATCAAAACTGGTAGTTGGGTGTATGAAAGAAAGAAAAACGAAAAAGCAAGATTGACTGGTAGATACGGCGAAAAGAGAGAAAGTATTGACTCCCCCAAGAAAAGATTGATATCAAAAAGGTTTTTTTAACATAAATGTTCTAAAGATTTGCTTTTTTGAGCAACCCCCCCCCCCAAAAAAAAAAAAAAAAAACATGCCGGCCGACCCAGATAACTCATCCGCCATGAACGATTCTACAGGCTCAGGTGAAGCAAGCGTTTCGTCTTCAGGTAATCAAGTAGTTCCTCTGAAAGAATCAGCCAAGAAGAAACGGAATCTTCCTGGGATGCCAG..........................................................ATTTGATTTTCTGTTTTTGGTTGCTTTGATTAGATCCCGATGCAGAGGTTATTGCTTTGTCACCAACAACTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367209" ref_strand="+" ref_description="SGN-E367209 [cLPT-5-I7]">
      <seq>accgtcaactgccgtaatgtcatttgcttcctctgttcaaaatcgagaattgcgggagaatccagtcacaaattctgctggagctgctacgaagcaagttctggaggaagcagcagcggtagcaagcttgactggaaactgtagcagctcttgtagtaatggaagtagtagcagcaatgtctttggaagtttgtttgcttcatcaacagcttcgggaagtttgccatctcaagctcctgttttttctgatatgtttcgagccatggcgcctgagcacactcttgagatggcaccaccttcatctacagaaccaatatctctcggcctagcgatgagtcacagttcgtcaatttttagaccagctggtcaagaacggaggcaatatgctcccgcaccacaaccagctatgtcggcaacagcattactgcagaaggcagctcagatgggtgcagcagcaaccagctcatcgttgttgaggggcattggggttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="171840" stop="173394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="172140" g_stop="172186" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="172187" i_stop="172648" i_length="462">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="172649" g_stop="173094" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="493" r_length="446" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E367209" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="172140" e_stop="172186"/>
          <exon e_start="172649" e_stop="173094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGTCAACTGCCGTAATGTCATTTGCTTCCTCCGTTCAAAATCGAGGTACCTTCTCTGCGTTTGATGTTTGTCGCATTTGTGTTTGTTACATATCAAACAAAATAACTTTGTTGTTTCTATATCTTGGAAGCTAGTTAATTTTGTCATTTATTGATCTTTGTTCTTATCTGTATTTATTCTTTGTACAAAATCATTTATCTTTTTCTATTAATCAATCAGAATCTTGTAGACAGAAGTAGGGTCTAAAATAGGAAGGAAAAAAATGAAGAAAATGATCGGATAATTAATTATAAACTAAGATTCAATGTCATGAAACCGTTGGCTAAAGAAAGAATAAGTAGTATAATGCTTAAATAAGGTAAAGATTGTAAAGAAAAGATACTATATTTGGATCTCCTTTTGCAATAGATAATGTTCTTTTTCTATGAAAAGTTTTAACTTTCTCTGTTTCCTTAAAGAAGTATGCTTCTTTTCATCTTTTTAATATAACTGCTACAATTTGTGCAGAATTGCGGGAGAATCCAGTCACAAATTCTGCTGGAGCTGCTACGAAGCAAGTTGTGGAGGAAGCAGCAGTGGTAGCAAGCTTGACTGGAAACTGTAGCAGCTCTTGTAGTAATGGAAGTAGTAGCAGCAATGTCTTTGGAAGTTTGTTTGCTTCATCAACAGCTTCGGGAAGTCTGCCATCTCAAGCTCCTGTTTTTTCTGATATATTTCGAGCCATGGCGCCTGAGCACACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGCCTAGCGATGAGTCACAGTTCGTCAATTTTTAGACCAGCTGGTCAAGAACGGAGGCAATATGCTCCCGCACCACAACCAGCTATGTCGGCAACAGCATTACTGCAGAAGGCAGCTCAGATGGGTGCAGCAGCAACCAGCTCATCGTTCTTGAGGGGCATTGGGGTTATG</genome_strand>
        <mrna_strand>ACCGTCAACTGCCGTAATGTCATTTGCTTCCTCTGTTCAAAATCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCGGGAGAATCCAGTCACAAATTCTGCTGGAGCTGCTACGAAGCAAGTTCTGGAGGAAGCAGCAGCGGTAGCAAGCTTGACTGGAAACTGTAGCAGCTCTTGTAGTAATGGAAGTAGTAGCAGCAATGTCTTTGGAAGTTTGTTTGCTTCATCAACAGCTTCGGGAAGTTTGCCATCTCAAGCTCCTGTTTTTTCTGATATGTTTCGAGCCATGGCGCCTGAGCACACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGCCTAGCGATGAGTCACAGTTCGTCAATTTTTAGACCAGCTGGTCAAGAACGGAGGCAATATGCTCCCGCACCACAACCAGCTATGTCGGCAACAGCATTACTGCAGAAGGCAGCTCAGATGGGTGCAGCAGCAACCAGCTCATCGTTGTTGAGGGGCATTGGGGTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E476388" ref_strand="+" ref_description="SGN-E476388 [cSTB-44-J11]">
      <seq>gtcaactgccgtaatgacatttgcttcctctgttcagaatcaagagttgcgggagaatccaatcacaaattctgctggagctgctacaaaacaagttctggaggaagcagcggcggtagcaagcttgactggaaactgtagcagctcttgtagtaatggaagtagtagcagcagtgtcttcggaagcttgtttgcttcatcaacagcttcgggaaattttgcatctcaaggtcctgttttttctgatatgtttcgagctatggcgcctgagcgcactcttgagatggcaccaccttcatctacagaaccaatatctctcggcctagcgatgagtcacagttcatcaatttttagaccagctggtcaagaacggaggcaatatgctcccgcaccacacccagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="171843" stop="173306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="172143" g_stop="172186" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="172187" i_stop="172648" i_length="462">
            <donor d_prob="0.987" d_score="0.91"/>
            <acceptor a_prob="0.984" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="172649" g_stop="173006" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="402" r_length="358" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E476388" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="172143" e_stop="172186"/>
          <exon e_start="172649" e_stop="173006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAACTGCCGTAATGTCATTTGCTTCCTCCGTTCAAAATCGAGGTACCTTCTCTGCGTTTGATGTTTGTCGCATTTGTGTTTGTTACATATCAAACAAAATAACTTTGTTGTTTCTATATCTTGGAAGCTAGTTAATTTTGTCATTTATTGATCTTTGTTCTTATCTGTATTTATTCTTTGTACAAAATCATTTATCTTTTTCTATTAATCAATCAGAATCTTGTAGACAGAAGTAGGGTCTAAAATAGGAAGGAAAAAAATGAAGAAAATGATCGGATAATTAATTATAAACTAAGATTCAATGTCATGAAACCGTTGGCTAAAGAAAGAATAAGTAGTATAATGCTTAAATAAGGTAAAGATTGTAAAGAAAAGATACTATATTTGGATCTCCTTTTGCAATAGATAATGTTCTTTTTCTATGAAAAGTTTTAACTTTCTCTGTTTCCTTAAAGAAGTATGCTTCTTTTCATCTTTTTAATATAACTGCTACAATTTGTGCAGAATTGCGGGAGAATCCAGTCACAAATTCTGCTGGAGCTGCTACGAAGCAAGTTGTGGAGGAAGCAGCAGTGGTAGCAAGCTTGACTGGAAACTGTAGCAGCTCTTGTAGTAATGGAAGTAGTAGCAGCAATGTCTTTGGAAGTTTGTTTGCTTCATCAACAGCTTCGGGAAGTCTGCCATCTCAAGCTCCTGTTTTTTCTGATATATTTCGAGCCATGGCGCCTGAGCACACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGCCTAGCGATGAGTCACAGTTCGTCAATTTTTAGACCAGCTGGTCAAGAACGGAGGCAATATGCTCCCGCACCACAACCAGC</genome_strand>
        <mrna_strand>GTCAACTGCCGTAATGACATTTGCTTCCTCTGTTCAGAATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGCGGGAGAATCCAATCACAAATTCTGCTGGAGCTGCTACAAAACAAGTTCTGGAGGAAGCAGCGGCGGTAGCAAGCTTGACTGGAAACTGTAGCAGCTCTTGTAGTAATGGAAGTAGTAGCAGCAGTGTCTTCGGAAGCTTGTTTGCTTCATCAACAGCTTCGGGAAATTTTGCATCTCAAGGTCCTGTTTTTTCTGATATGTTTCGAGCTATGGCGCCTGAGCGCACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGCCTAGCGATGAGTCACAGTTCATCAATTTTTAGACCAGCTGGTCAAGAACGGAGGCAATATGCTCCCGCACCACACCCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540144" ref_strand="+" ref_description="SGN-E540144 [TUS-60-E7]">
      <seq>cccactcttgacctccttggattaggaatggcagctagtgtcggtccatcgcctggattatctgcccttttaacatccatgggtagcaatcttgacatggtgacttcagctggatcatttggtagtgcagatttcagtgggaaagacttgggaagaaattcatgatatcttagagtcaggtttaatttattctgtataggacaatgaatttcacttgatgcagcaaaaaacatattggcaagctctcagccccaaagatttgagcataggatggcaggaggaaagaaggcagttggacacttttaagattgttctactgtctcctttgtgtaggaaaagtagaaaggttttttttctgctgtacagtagaagttgaatgtatagctgtattaaaactcctctgctttttgttacagatgaagctgttaatgtgtttagtatataatttgctataagcatatttaaccaagagaggctcatctagtgggaatttttatcaaatggtatctctatttcagacagtgcaaatttttataaaatttgtataattcagatgcataactaatgcagcagggttaaactctttgagcagaaaaaaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="172960" stop="174155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="173260" g_stop="173862" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E540144" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="173260" e_stop="173862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACTCTTGACCTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTTTAACATCCATGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCTGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAGACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAGCAGTGTTAAACTCTTTGAGCAAAAAAGTTTAAA</genome_strand>
        <mrna_strand>CCCACTCTTGACCTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTTTAACATCCATGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCTGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAGACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAGCAGGGTTAAACTCTTTGAGCAGAAAAAAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E286333" ref_strand="+" ref_description="SGN-E286333 [cLES-11-M19]">
      <seq>ccactcttgacctccttggattaggaatggcagctagtgtcggtccatcgcctggattatctgcccttttaacatccatgggtagcaatcttgacatggtgacttcagctggatcatttggtagtgcagatttcagtgggaaagacttgggaagaaattcatgatatcttagagtcaggtttaatttattctgtataggacaatgaatttcacttgatgcagcaaaaaacatattggcaagctctcagccccaaagatttgagcataggatggcaggaggaaagaaggcagttggacacttttaagattgttctactgtctcctttgtgtaggaaaagtagaaaggttttttttctgctgtacagtagaagttgaatgtatagctgtattaaaactcctctgctttttgttacagatgaagctgttaatgtgtttagtatataatttgctataagcatatttaaccaagagaggctcatctagtgggaatttttatcaaatggtatctctatttcagacagtgcaaatttttataaaatttgtataattcagatgcataactaatgcagcagtgttaaactctttgagcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="172961" stop="174155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="173261" g_stop="173862" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="602" r_length="602" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E286333" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="173261" e_stop="173862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTCTTGACCTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTTTAACATCCATGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCTGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAGACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAGCAGTGTTAAACTCTTTGAGCAAAAAAGTTTAAA</genome_strand>
        <mrna_strand>CCACTCTTGACCTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTTTAACATCCATGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCTGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAGACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAGCAGTGTTAAACTCTTTGAGCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E540141" ref_strand="+" ref_description="SGN-E540141 [TUS-60-E7](-)">
      <seq>ctccttggattaggaatggcagctagtgtcggtccatcgcctggattatctgcctttttaacatccctgggtagcaatcttgacatggtgacttcagctggatcatttggtagtgcagatttcagtgggaaagacttgggaagaaattcatgatatcttagagtcaggtttaatttattcggtataggacaatgaatttcacttgatgcagcaaaaaacatattggcaagctctcagccccaaagatttgagcataggatggcaggaggaaagaaggcagttggacacttttaagattgttctactgtctcctttgtgtaggaaaagtagaaaggttttttttctgctgtacagtagaagttgaatgtatagctgtattaaaactcctctgctttttgttacagatgaagctgttaatgtgtttagtatataatttgctataagcatatttaaccaagagaggctcatctagtgggaatttttatcaaatggtatctctatttcagtacagtgcaaatttttataaaatttgtataattcagatgcataactaatgcagacagtgttaaactctttgagcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="+" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="172972" stop="174155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="173272" g_stop="173862" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="593" r_length="593" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="+" ref_id="SGN-E540141" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="173272" e_stop="173862"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTTTAACATCCATGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCTGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAG-ACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAG-CAGTGTTAAACTCTTTGAGCAAAAAAGTTTAAA</genome_strand>
        <mrna_strand>CTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCTTTTTAACATCCCTGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCGGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAGTACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAGACAGTGTTAAACTCTTTGAGCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E711967" ref_strand="+" ref_description="SGN-E711967 [FB03CB01]">
      <seq>ccttagagaggcagagcaagcaaggagagaagaggaagaagcagaaaaaagaaggcaggaggaggaagaatcaaggagagaggagaaagcaagaagaaggcaacaggaggaagcaaggaggagagaggaggaagaagcagcaaaaaggcaacatgaggaagaagcagagagagaggcagaggaagcaagaaggatagaggaggaagaagcacaaagagaggcagaagaagcaaggagaatacaacaggaggaagaagcagagagagcaaggagaagagaagaagaagcagaaacaagaaggaaggaggaggaggaggaagaatcaaggagacaagaggaggaatcaaggaggagtgaagaagaggcagcaagagaggcagagagggaaaggcaagaggaagctgaaagacaagaagaagctaggagacgggaggaagaaacagaagagaggcatcaacaagaagaaaccgaggaagaggagccaggccaacctgaaatgaacggatattcctcaaactagcctatgagtgtgttgtgtaactagtgtactcagcaagttctcaggagctgaatagtctctacgtttttgtataatctcatgtgtgtgtacgtcttttcatttacttttgctgtcatatttatgagtttatgtaataacaccgaaacaagttttcatagatcacttttccctggcaagtctccagcaatgtagcagaaggtgttaggatgttatctggatgaaagcagttcatacatttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="178572" stop="177215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="178276" g_stop="177515" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="762" r_length="762" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E711967" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="178276" e_stop="177515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGAGAGGCAGAGCAAGCAAGGAGAGAAGAGGAAGAAGCAGAAAAAAGAAGGCAGGAGGAGGAAGAATCAAGGAGAGAGGAGAAAGCAAGAAGAAGGCAACAGGAGGAAGCAAGGAGGAGAGAGGAGGAAGAAGCAGCAAAAAGGCAACATGAGGAAGAAGCAGAGAGAGAGGCAGAGGAAGCAAGAAGGATAGAGGAGGAAGAAGCACAAAGAGAGGCAGAAGAAGCAAGGAGAATACAACAGGAGGAAGAAGCAGAGAGAGCAAGGAGAAGAGAAGAAGAAGCAGAAACAAGAAGGAAGGAGGAGGAGGAGGAAGAATCAAGGAGACAAGAGGAGGAATCAAGGAGGAGTGAAGAAGAGGCAGCAAGAGAGGCAGAGAGGGAAAGGCAAGAGGAAGCTGAAAGACAAGAAGAAGCTAGGAGACGGGAGGAAGAAACAGAAGAGAGGCATCAACAAGAAGAAACCGAGGAAGAGGAGCCAGGCCAACCTGAAATGAACGGATATTCCTCAAACTAGCCTATGAGTGTGTTGTGTAACTAGTGTACTCAGCAAGTTCTCAGGAGCTGAATAGTCTCTACGTTTTTGTATAATCTCATGTGTGTGTACGTCTTTTCATTTACTTTTGCTGTCATATTTATGAGTTTATGTAATAACACCGAAACAAGTTTTCATAGATCACTTTTCCCTGGCAAGTCTCCAGCAATGTAGCAGAAGGTGTTAGGATGTTATCTGGATGAAAGCAGTTCATACATTTAAAT</genome_strand>
        <mrna_strand>CCTTAGAGAGGCAGAGCAAGCAAGGAGAGAAGAGGAAGAAGCAGAAAAAAGAAGGCAGGAGGAGGAAGAATCAAGGAGAGAGGAGAAAGCAAGAAGAAGGCAACAGGAGGAAGCAAGGAGGAGAGAGGAGGAAGAAGCAGCAAAAAGGCAACATGAGGAAGAAGCAGAGAGAGAGGCAGAGGAAGCAAGAAGGATAGAGGAGGAAGAAGCACAAAGAGAGGCAGAAGAAGCAAGGAGAATACAACAGGAGGAAGAAGCAGAGAGAGCAAGGAGAAGAGAAGAAGAAGCAGAAACAAGAAGGAAGGAGGAGGAGGAGGAAGAATCAAGGAGACAAGAGGAGGAATCAAGGAGGAGTGAAGAAGAGGCAGCAAGAGAGGCAGAGAGGGAAAGGCAAGAGGAAGCTGAAAGACAAGAAGAAGCTAGGAGACGGGAGGAAGAAACAGAAGAGAGGCATCAACAAGAAGAAACCGAGGAAGAGGAGCCAGGCCAACCTGAAATGAACGGATATTCCTCAAACTAGCCTATGAGTGTGTTGTGTAACTAGTGTACTCAGCAAGTTCTCAGGAGCTGAATAGTCTCTACGTTTTTGTATAATCTCATGTGTGTGTACGTCTTTTCATTTACTTTTGCTGTCATATTTATGAGTTTATGTAATAACACCGAAACAAGTTTTCATAGATCACTTTTCCCTGGCAAGTCTCCAGCAATGTAGCAGAAGGTGTTAGGATGTTATCTGGATGAAAGCAGTTCATACATTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E713545" ref_strand="+" ref_description="SGN-E713545 [FB08DG02]">
      <seq>cggtagaagcagcaaaaaggcaacatgaggaagaagcagagagagaggcagaggaagcaagaaggatagaggaggaagaagcacaaagagaggcagaagaagcaaggagaatacaacaggaggaagaagcagagagagcaaggagaagagaagaagaagcagaaacaagaaggaaggaggaggaggaggaagaatcaaggagacaagaggaggaatcaaggaggagtgaagaagaggcagcaagagaggcagagagggaaaggcaagaggaagctgaaagacaagaagaagctaggagacgggaggaagaaacagaagagaggcatcaacaagaagaaaccgaggaagaggagccaggccaacctgaaatgaacggatattcctcaaactagcctatgagtgtgttgtgtaactagtgtactcagcaagttctcaggagctgaatagtctctacgtttttgtataatctcatgtgtgtgtacgtcttttcatttacttttgctgtcatatttatgagtttatgtaataacaccgaaacaagttttcatannaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0128E12-iyPDT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0128E12.1" temp_strand="-" temp_description="C02SLm0128E12.1  AC215492.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0128E12 sequenced_by:kribb upload_account_name:korea">
        <position start="178447" stop="177300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="178148" g_stop="177599" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="550" r_length="550" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="552" polyA_stop="565"/>
      <MATCH_line gen_id="C02SLm0128E12.1" gen_strand="-" ref_id="SGN-E713545" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0128E12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="178148" e_stop="177599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGAAGCAGCAAAAAGGCAACATGAGGAAGAAGCAGAGAGAGAGGCAGAGGAAGCAAGAAGGATAGAGGAGGAAGAAGCACAAAGAGAGGCAGAAGAAGCAAGGAGAATACAACAGGAGGAAGAAGCAGAGAGAGCAAGGAGAAGAGAAGAAGAAGCAGAAACAAGAAGGAAGGAGGAGGAGGAGGAAGAATCAAGGAGACAAGAGGAGGAATCAAGGAGGAGTGAAGAAGAGGCAGCAAGAGAGGCAGAGAGGGAAAGGCAAGAGGAAGCTGAAAGACAAGAAGAAGCTAGGAGACGGGAGGAAGAAACAGAAGAGAGGCATCAACAAGAAGAAACCGAGGAAGAGGAGCCAGGCCAACCTGAAATGAACGGATATTCCTCAAACTAGCCTATGAGTGTGTTGTGTAACTAGTGTACTCAGCAAGTTCTCAGGAGCTGAATAGTCTCTACGTTTTTGTATAATCTCATGTGTGTGTACGTCTTTTCATTTACTTTTGCTGTCATATTTATGAGTTTATGTAATAACACCGAAACAAGTTTTCATAG</genome_strand>
        <mrna_strand>CGGTAGAAGCAGCAAAAAGGCAACATGAGGAAGAAGCAGAGAGAGAGGCAGAGGAAGCAAGAAGGATAGAGGAGGAAGAAGCACAAAGAGAGGCAGAAGAAGCAAGGAGAATACAACAGGAGGAAGAAGCAGAGAGAGCAAGGAGAAGAGAAGAAGAAGCAGAAACAAGAAGGAAGGAGGAGGAGGAGGAAGAATCAAGGAGACAAGAGGAGGAATCAAGGAGGAGTGAAGAAGAGGCAGCAAGAGAGGCAGAGAGGGAAAGGCAAGAGGAAGCTGAAAGACAAGAAGAAGCTAGGAGACGGGAGGAAGAAACAGAAGAGAGGCATCAACAAGAAGAAACCGAGGAAGAGGAGCCAGGCCAACCTGAAATGAACGGATATTCCTCAAACTAGCCTATGAGTGTGTTGTGTAACTAGTGTACTCAGCAAGTTCTCAGGAGCTGAATAGTCTCTACGTTTTTGTATAATCTCATGTGTGTGTACGTCTTTTCATTTACTTTTGCTGTCATATTTATGAGTTTATGTAATAACACCGAAACAAGTTTTCATAN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>265</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2685" PGL_stop="665"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2685" e_stop="665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="2685" e_stop="665" e_length="2021"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2685" stop="1932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2618" stop="2160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2569" stop="2008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2478" stop="1933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2476" stop="1904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2474" stop="2013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2403" stop="1945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2343" stop="1858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2343" stop="1987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2062" stop="1457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2062" stop="1506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2062" stop="1530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2062" stop="1549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1909" stop="1543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1842" stop="1309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1646" stop="1127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1411" stop="665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1337" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1318" stop="715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1291" stop="875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1125" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226168" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1092" stop="930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1081" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTGACCTTGTTC</gDNA_template>
            <first_frame> R  Y  F  S  S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *  G  T  G  *  L  D  S  I  *  T  L  Q  L  I  R  L  K  K  P  R  *  L  V  F  C  N  Y  H  I  V  L  V  V  C  A  V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  L  T  G  V  L  Q  D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q  K  C  F  V  V  F  *  G  *  *  F  Y  F  C  F  S  *  P  C   </first_frame>
            <second_frame>  D  I  F  L  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  V  Q  A  N  *  I  A  F  E  L  C  N  *  L  D  *  K  N  P  D  S  *  F  F  A  I  I  I  *  Y  W  *  F  V  Q  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S  *  L  V  S  C  K  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  N  A  L  *  F  S  E  V  N  D  F  T  S  V  S  V  D  L  V  </second_frame>
            <third_frame>   I  F  F  F  *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  R  Y  R  L  I  R  *  H  L  N  F  A  I  N  *  T  K  K  T  Q  I  A  S  F  L  Q  L  S  Y  S  I  G  S  L  C  S  Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H  P  N  W  C  P  A  R  F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E  M  L  C  S  F  L  R  L  M  I  L  L  L  F  Q  L  T  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2163" stop="1891"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1827" stop="1588"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVFCNYHIVLVVCAVKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1115" stop="906"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="2685" e_stop="1895"/>
            <exon e_start="1784" e_stop="665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.703" e_score="0.999"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="2685" e_stop="1895" e_length="791"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.703">
            <gDNA_intron_boundary i_start="1894" i_stop="1785" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="1784" e_stop="665" e_length="1120"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2685" stop="1932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2618" stop="2160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2569" stop="2008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2555" stop="1895"/>
              <exon start="1784" stop="1674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2478" stop="1933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2476" stop="1895"/>
              <exon start="1784" stop="1577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2476" stop="1904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2474" stop="2013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2403" stop="1945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2343" stop="1987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2308" stop="1895"/>
              <exon start="1784" stop="1734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1646" stop="1127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1643" stop="1234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1411" stop="665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1337" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1318" stop="715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1291" stop="875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1125" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226168" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1092" stop="930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1081" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTGACCTTGTTC</gDNA_template>
            <first_frame> R  Y  F  S  S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  I :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H  P  N  W  C  P  A  R  F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E  M  L  C  S  F  L  R  L  M  I  L  L  L  F  Q  L  T  L  F </first_frame>
            <second_frame>  D  I  F  L  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K   : F  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  L  T  G  V  L  Q  D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q  K  C  F  V  V  F  *  G  *  *  F  Y  F  C  F  S  *  P  C   </second_frame>
            <third_frame>   I  F  F  F  *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S  *  L  V  S  C  K  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  N  A  L  *  F  S  E  V  N  D  F  T  S  V  S  V  D  L  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2045" stop="1895"/>
                    <exon start="1784" stop="1588"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKFKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2163" stop="1895"/>
                    <exon start="1784" stop="1763"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQIQGRRRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1115" stop="906"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="2685" e_stop="1895"/>
            <exon e_start="1784" e_stop="1615"/>
            <exon e_start="1415" e_stop="665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.703" e_score="0.999"/>
          <exon-intron don_prob="0.968" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="2685" e_stop="1895" e_length="791"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.703">
            <gDNA_intron_boundary i_start="1894" i_stop="1785" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1784" e_stop="1615" e_length="170"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.000">
            <gDNA_intron_boundary i_start="1614" i_stop="1416" i_length="199"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="1415" e_stop="665" e_length="751"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2685" stop="1932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2618" stop="2160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2569" stop="2008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2555" stop="1895"/>
              <exon start="1784" stop="1674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2478" stop="1933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2476" stop="1904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2474" stop="2013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2403" stop="1945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2343" stop="1987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2308" stop="1895"/>
              <exon start="1784" stop="1734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1719" stop="1615"/>
              <exon start="1415" stop="797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1719" stop="1615"/>
              <exon start="1415" stop="808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1411" stop="665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1337" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1318" stop="715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1291" stop="875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1125" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226168" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1092" stop="930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1081" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG : ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTGACCTTGTTC</gDNA_template>
            <first_frame> R  Y  F  S  S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  I :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S   : D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q  K  C  F  V  V  F  *  G  *  *  F  Y  F  C  F  S  *  P  C   </first_frame>
            <second_frame>  D  I  F  L  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K   : F  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  :  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  N  A  L  *  F  S  E  V  N  D  F  T  S  V  S  V  D  L  V  </second_frame>
            <third_frame>   I  F  F  F  *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R :   F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E  M  L  C  S  F  L  R  L  M  I  L  L  L  F  Q  L  T  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2045" stop="1895"/>
                    <exon start="1784" stop="1615"/>
                    <exon start="1415" stop="1404"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKFKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQIQL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2163" stop="1895"/>
                    <exon start="1784" stop="1763"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQIQGRRRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1115" stop="906"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="2685" e_stop="1890"/>
            <exon e_start="1784" e_stop="1615"/>
            <exon e_start="1415" e_stop="665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.703" e_score="0.999"/>
          <exon-intron don_prob="0.968" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="2685" e_stop="1890" e_length="796"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.703">
            <gDNA_intron_boundary i_start="1889" i_stop="1785" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1784" e_stop="1615" e_length="170"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.000">
            <gDNA_intron_boundary i_start="1614" i_stop="1416" i_length="199"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="1415" e_stop="665" e_length="751"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2685" stop="1932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2672" stop="2057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2618" stop="2160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2569" stop="2008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2478" stop="1933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2476" stop="1904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2474" stop="2013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2403" stop="1945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2343" stop="1987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2132" stop="1890"/>
              <exon start="1784" stop="1663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204642" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1719" stop="1615"/>
              <exon start="1415" stop="797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1719" stop="1615"/>
              <exon start="1415" stop="808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1411" stop="665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1337" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1318" stop="715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1291" stop="875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1125" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226168" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1092" stop="930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1081" stop="702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG : ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTGACCTTGTTC</gDNA_template>
            <first_frame> R  Y  F  S  S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *   : V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  :  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  N  A  L  *  F  S  E  V  N  D  F  T  S  V  S  V  D  L  V  </first_frame>
            <second_frame>  D  I  F  L  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R :   F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E  M  L  C  S  F  L  R  L  M  I  L  L  L  F  Q  L  T  L  F </second_frame>
            <third_frame>   I  F  F  F  *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  S :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S   : D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q  K  C  F  V  V  F  *  G  *  *  F  Y  F  C  F  S  *  P  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2163" stop="1891"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1115" stop="906"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2045" stop="1890"/>
                    <exon start="1784" stop="1743"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKCKSRQKKIMKVNVQD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="16117" PGL_stop="16796"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16117" e_stop="16796"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="16117" e_stop="16796" e_length="680"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16117" stop="16796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589154" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACACTATTCATATAAACAGAGAAGGCTTTAATCTTGAAATTCAAAGTTAAACTTGCTCAAAAATATCATCTTTCTATACTAACTTTTTAATCTACAGAGAGCAATGAAATTTAAATTTAAGCACTTAGAAGAAAGTACCTAACAGAACTGATGTAGAACACAATTAGTGCCATGAAGAAACAGTCAAAAGGGGATTATCTTTCCAAGCCAAGGAGAGAAACCCAGGGGCAGAATCAATTAATCCAAATGATGAACTATAATTATAGTTCCAAAGAAGAATTTTTGCTTGACTCATTGCATAATGGCTAAGTGTTACTGGTTTAAAACCAGCCCCTTCCATTAATTCTTTCCAATGTTCTTTATCTTCCATACATTCTCTTCTGGTTCCGCCATCGTCTAGGCCCACCGCTCCGGCAATTCTCCGGCCAAGTATCAGTCTTTCCACTTGTACTCTCTCAGCGGAGTCTCGGGTCAAGCTCGGATCCAATGACTCGAAAATAGTTGAGTAGTATTTCAGTGCGTTCTTAAATCGCTGCAGGAATCCAACATCATTCAAATTCACCTCATACTCACCCAATGTCACAATGCTTGGATTCAATGATTTGGCTAAACTCAGTGCAGTTTTTACACCAACATTTGTTTCGTCCAGTAAATTGTACAGCTGCAACATGAAGTTCACA</gDNA_template>
            <first_frame> T  L  F  I  *  T  E  K  A  L  I  L  K  F  K  V  K  L  A  Q  K  Y  H  L  S  I  L  T  F  *  S  T  E  S  N  E  I  *  I  *  A  L  R  R  K  Y  L  T  E  L  M  *  N  T  I  S  A  M  K  K  Q  S  K  G  D  Y  L  S  K  P  R  R  E  T  Q  G  Q  N  Q  L  I  Q  M  M  N  Y  N  Y  S  S  K  E  E  F  L  L  D  S  L  H  N  G  *  V  L  L  V  *  N  Q  P  L  P  L  I  L  S  N  V  L  Y  L  P  Y  I  L  F  W  F  R  H  R  L  G  P  P  L  R  Q  F  S  G  Q  V  S  V  F  P  L  V  L  S  Q  R  S  L  G  S  S  S  D  P  M  T  R  K  *  L  S  S  I  S  V  R  S  *  I  A  A  G  I  Q  H  H  S  N  S  P  H  T  H  P  M  S  Q  C  L  D  S  M  I  W  L  N  S  V  Q  F  L  H  Q  H  L  F  R  P  V  N  C  T  A  A  T  *  S  S   </first_frame>
            <second_frame>  H  Y  S  Y  K  Q  R  R  L  *  S  *  N  S  K  L  N  L  L  K  N  I  I  F  L  Y  *  L  F  N  L  Q  R  A  M  K  F  K  F  K  H  L  E  E  S  T  *  Q  N  *  C  R  T  Q  L  V  P  *  R  N  S  Q  K  G  I  I  F  P  S  Q  G  E  K  P  R  G  R  I  N  *  S  K  *  *  T  I  I  I  V  P  K  K  N  F  C  L  T  H  C  I  M  A  K  C  Y  W  F  K  T  S  P  F  H  *  F  F  P  M  F  F  I  F  H  T  F  S  S  G  S  A  I  V  *  A  H  R  S  G  N  S  P  A  K  Y  Q  S  F  H  L  Y  S  L  S  G  V  S  G  Q  A  R  I  Q  *  L  E  N  S  *  V  V  F  Q  C  V  L  K  S  L  Q  E  S  N  I  I  Q  I  H  L  I  L  T  Q  C  H  N  A  W  I  Q  *  F  G  *  T  Q  C  S  F  Y  T  N  I  C  F  V  Q  *  I  V  Q  L  Q  H  E  V  H  </second_frame>
            <third_frame>   T  I  H  I  N  R  E  G  F  N  L  E  I  Q  S  *  T  C  S  K  I  S  S  F  Y  T  N  F  L  I  Y  R  E  Q  *  N  L  N  L  S  T  *  K  K  V  P  N  R  T  D  V  E  H  N  *  C  H  E  E  T  V  K  R  G  L  S  F  Q  A  K  E  R  N  P  G  A  E  S  I  N  P  N  D  E  L  *  L  *  F  Q  R  R  I  F  A  *  L  I  A  *  W  L  S  V  T  G  L  K  P  A  P  S  I  N  S  F  Q  C  S  L  S  S  I  H  S  L  L  V  P  P  S  S  R  P  T  A  P  A  I  L  R  P  S  I  S  L  S  T  C  T  L  S  A  E  S  R  V  K  L  G  S  N  D  S  K  I  V  E  *  Y  F  S  A  F  L  N  R  C  R  N  P  T  S  F  K  F  T  S  Y  S  P  N  V  T  M  L  G  F  N  D  L  A  K  L  S  A  V  F  T  P  T  F  V  S  S  S  K  L  Y  S  C  N  M  K  F  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16419" stop="16625"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLSVTGLKPAPSINSFQCSLSSIHSLLVPPSSRPTAPAILRPSISLSTCTLSAESRVKLGSNDSKIVE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="18286" PGL_stop="16137"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18286" e_stop="16137"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="18286" e_stop="16137" e_length="2150"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18286" stop="17903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18220" stop="16137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18203" stop="17687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17814" stop="17113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17446" stop="17020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17367" stop="16541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554527" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTTCAAGATTAAAGCCTTC</gDNA_template>
            <first_frame> *  G  *  A  F  L  N  *  S  *  A  L  L  T  P  F  S  T  L  S  L  F  L  G  L  L  C  *  S  T  Q  N  L  L  T  N  F  F  L  *  L  L  L  L  R  *  C  V  S  S  V  A  *  *  D  L  V  W  R  M  A  Y  M  C  T  D  S  G  N  L  M  A  I  A  Q  Q  V  I  K  Q  K  Q  Q  Q  E  Q  L  Q  Q  Q  E  Q  Q  Q  Q  Q  Q  Q  Q  F  L  G  V  N  P  L  C  L  S  P  W  T  S  N  H  Q  T  L  T  N  S  P  T  L  G  Y  G  L  T  G  S  G  F  A  D  P  F  Q  V  A  G  G  T  D  S  A  E  P  G  F  Q  F  P  N  L  E  H  H  S  T  G  F  R  F  A  D  F  G  G  G  P  G  G  E  F  D  S  D  E  W  M  E  S  L  I  G  G  G  D  S  T  G  S  S  N  L  Q  S  G  C  E  A  W  Q  T  S  S  E  F  T  T  L  Y  G  D  P  F  P  S  C  P  N  R  L  S  I  G  S  A  P  P  P  P  P  S  S  D  L  N  G  V  I  F  S  E  T  Q  K  N  L  S  P  L  Q  P  Q  T  S  P  W  V  A  P  S  S  S  P  P  P  I  V  Q  P  A  S  K  E  S  K  V  V  S  V  D  V  Q  P  C  S  S  P  E  S  F  S  S  K  P  L  L  K  S  L  V  E  C  A  R  L  A  E  S  E  P  E  N  V  V  K  S  L  I  R  L  R  E  S  V  S  Q  Q  G  D  P  M  E  R  V  G  F  Y  F  L  E  A  L  Y  N  R  L  S  S  C  Q  A  E  R  T  P  S  I  F  G  T  A  P  E  E  L  T  L  S  Y  K  A  F  N  D  A  C  P  Y  S  K  F  A  H  L  T  A  N  Q  A  I  L  E  A  T  E  K  A  T  R  I  H  I  V  D  F  G  I  V  H  G  I  Q  W  A  A  F  L  Q  A  L  A  T  R  S  A  G  K  P  V  S  V  R  I  S  G  I  P  S  V  V  L  G  N  S  P  S  A  S  L  L  A  T  G  N  R  L  R  D  F  A  K  L  L  D  L  N  F  E  F  E  P  I  L  T  P  V  Q  E  L  N  G  S  S  F  R  V  D  P  D  E  I  L  A  V  N  F  M  L  Q  L  Y  N  L  L  D  E  T  N  V  G  V  K  T  A  L  S  L  A  K  S  L  N  P  S  I  V  T  L  G  E  Y  E  V  N  L  N  D  V  G  F  L  Q  R  F  K  N  A  L  K  Y  Y  S  T  I  F  E  S  L  D  P  S  L  T  R  D  S  A  E  R  V  Q  V  E  R  L  I  L  G  R  R  I  A  G  A  V  G  L  D  D  G  G  T  R  R  E  C  M  E  D  K  E  H  W  K  E  L  M  E  G  A  G  F  K  P  V  T  L  S  H  Y  A  M  S  Q  A  K  I  L  L  W  N  Y  N  Y  S  S  S  F  G  L  I  D  S  A  P  G  F  L  S  L  A  W  K  D  N  P  L  L  T  V  S  S  W  H  *  L  C  S  T  S  V  L  L  G  T  F  F  *  V  L  K  F  K  F  H  C  S  L  *  I  K  K  L  V  *  K  D  D  I  F  E  Q  V  *  L  *  I  S  R  L  K  P   </first_frame>
            <second_frame>  K  A  E  L  F  S  I  K  A  K  H  F  *  P  P  F  Q  L  S  P  S  S  W  G  Y  S  V  S  P  L  K  T  C  S  P  I  S  S  Y  N  C  C  C  *  G  N  V  *  V  V  *  L  S  K  I  W  C  G  E  W  P  I  C  V  R  T  V  G  I  *  W  Q  L  L  S  K  S  *  S  K  S  S  S  R  S  S  S  N  S  K  S  N  S  S  S  S  N  N  N  S  W  V  L  I  L  C  V  S  A  H  G  L  P  I  T  R  P  *  L  I  A  P  L  *  D  M  D  L  P  G  R  V  L  Q  T  H  F  R  S  P  E  E  Q  I  A  P  S  R  D  F  S  S  L  T  W  N  I  I  R  P  G  L  G  L  L  I  S  A  V  D  R  V  V  S  L  T  Q  M  S  G  W  R  A  *  *  A  A  E  I  L  P  E  A  L  I  F  N  L  V  A  K  P  G  R  R  V  P  N  S  L  P  S  T  E  I  R  S  R  V  V  R  I  D  S  V  S  V  L  L  L  R  L  H  L  L  P  I  S  M  G  S  F  F  R  K  P  R  K  I  *  A  H  Y  N  H  R  H  L  H  G  S  H  H  L  H  L  L  L  Q  L  F  N  P  R  A  K  N  P  R  W  Y  Q  L  M  C  S  H  V  V  P  L  K  V  F  R  Q  N  H  C  *  N  P  W  W  N  V  Q  D  S  L  N  Q  S  L  K  M  *  *  N  H  *  F  D  *  G  N  Q  F  P  N  K  E  I  Q  W  S  E  L  G  S  I  S  *  K  L  F  T  I  G  F  R  R  V  K  Q  R  E  L  R  Q  S  L  V  L  R  R  R  S  S  L  C  H  T  K  P  L  M  M  H  V  P  T  Q  S  L  L  T  *  R  L  I  R  R  F  L  K  Q  L  K  K  Q  R  G  F  T  L  *  I  L  E  L  F  M  V  S  N  G  Q  L  F  Y  K  L  *  Q  L  D  Q  L  V  N  Q  S  V  L  E  S  L  A  F  H  Q  W  Y  W  V  T  L  R  Q  L  H  F  *  L  Q  G  I  V  F  V  T  S  R  S  F  W  I  L  T  S  N  S  N  Q  Y  *  L  Q  F  R  N  L  T  G  L  V  F  E  L  I  Q  M  K  S  *  L  *  T  S  C  C  S  C  T  I  Y  W  T  K  Q  M  L  V  *  K  L  H  *  V  *  P  N  H  *  I  Q  A  L  *  H  W  V  S  M  R  *  I  *  M  M  L  D  S  C  S  D  L  R  T  H  *  N  T  T  Q  L  F  S  S  H  W  I  R  A  *  P  E  T  P  L  R  E  Y  K  W  K  D  *  Y  L  A  G  E  L  P  E  R  W  A  *  T  M  A  E  P  E  E  N  V  W  K  I  K  N  I  G  K  N  *  W  K  G  L  V  L  N  Q  *  H  L  A  I  M  Q  *  V  K  Q  K  F  F  F  G  T  I  I  I  V  H  H  L  D  *  L  I  L  P  L  G  F  S  P  W  L  G  K  I  I  P  F  *  L  F  L  H  G  T  N  C  V  L  H  Q  F  C  *  V  L  S  S  K  C  L  N  L  N  F  I  A  L  C  R  L  K  S  *  Y  R  K  M  I  F  L  S  K  F  N  F  E  F  Q  D  *  S  L  </second_frame>
            <third_frame>   R  L  S  F  S  Q  L  K  L  S  T  S  N  P  L  F  N  S  L  P  L  L  G  A  T  L  L  V  H  S  K  L  A  H  Q  F  L  L  I  T  V  V  V  E  V  M  C  E  *  C  S  L  V  R  F  G  V  E  N  G  L  Y  V  Y  G  Q  W  E  S  N  G  N  C  S  A  S  H  K  A  K  A  A  A  G  A  A  P  T  A  R  A  T  A  A  A  A  T  T  I  L  G  C  *  S  F  V  S  Q  P  M  D  F  Q  S  P  D  L  N  *  *  P  H  F  R  I  W  T  Y  R  V  G  F  C  R  P  I  S  G  R  R  R  N  R  *  R  R  A  G  I  S  V  P  *  L  G  T  S  F  D  R  V  *  V  C  *  F  R  R  W  T  G  W  *  V  *  L  R  *  V  D  G  E  L  D  R  R  R  R  F  Y  R  K  L  *  S  S  I  W  L  R  S  L  A  D  E  F  R  I  H  Y  P  L  R  R  S  V  P  E  L  S  E  S  T  Q  Y  R  F  C  S  S  A  S  T  F  F  R  S  Q  W  G  H  F  F  G  N  P  E  K  S  K  P  T  T  T  T  D  I  S  M  G  R  T  I  F  I  S  S  S  N  C  S  T  R  E  Q  R  I  Q  G  G  I  S  *  C  A  A  M  *  F  P  *  K  F  F  V  K  T  I  V  E  I  L  G  G  M  C  K  T  R  *  I  R  A  *  K  C  S  K  I  I  D  S  T  K  G  I  S  F  P  T  R  R  S  N  G  A  S  W  V  L  F  L  R  S  S  L  Q  *  A  F  V  V  S  S  R  E  N  S  V  N  L  W  Y  C  A  G  G  A  H  F  V  I  Q  S  L  *  *  C  M  S  L  L  K  V  C  S  L  N  G  *  S  G  D  S  *  S  N  *  K  S  N  E  D  S  H  C  R  F  W  N  C  S  W  Y  P  M  G  S  F  F  T  S  F  S  N  *  I  S  W  *  T  S  Q  C  *  N  L  W  H  S  I  S  G  I  G  *  L  S  V  S  F  T  F  S  Y  R  E  S  S  S  *  L  R  E  A  S  G  S  *  L  R  I  R  T  N  I  D  S  S  S  G  T  *  R  V  *  F  S  S  *  S  R  *  N  L  S  C  E  L  H  V  A  A  V  Q  F  T  G  R  N  K  C  W  C  K  N  C  T  E  F  S  Q  I  I  E  S  K  H  C  D  I  G  *  V  *  G  E  F  E  *  C  W  I  P  A  A  I  *  E  R  T  E  I  L  L  N  Y  F  R  V  I  G  S  E  L  D  P  R  L  R  *  E  S  T  S  G  K  T  D  T  W  P  E  N  C  R  S  G  G  P  R  R  W  R  N  Q  K  R  M  Y  G  R  *  R  T  L  E  R  I  N  G  R  G  W  F  *  T  S  N  T  *  P  L  C  N  E  S  S  K  N  S  S  L  E  L  *  L  *  F  I  I  W  I  N  *  F  C  P  W  V  S  L  L  G  L  E  R  *  S  P  F  D  C  F  F  M  A  L  I  V  F  Y  I  S  S  V  R  Y  F  L  L  S  A  *  I  *  I  S  L  L  S  V  D  *  K  V  S  I  E  R  *  Y  F  *  A  S  L  T  L  N  F  K  I  K  A  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18124" stop="16280"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1842</number_coding_nucleotides>
                  <number_encoded_amino_acids>614</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLVWRMAYMCTDSGNLMAIAQQVIKQKQQQEQLQQQEQQQQQQQQFLGVNPLCLSPWTSNHQTLTNSPTLGYGLTGSGFADPFQVAGGTDSAEPGFQFPNLEHHSTGFRFADFGGGPGGEFDSDEWMESLIGGGDSTGSSNLQSGCEAWQTSSEFTTLYGDPFPSCPNRLSIGSAPPPPPSSDLNGVIFSETQKNLSPLQPQTSPWVAPSSSPPPIVQPASKESKVVSVDVQPCSSPESFSSKPLLKSLVECARLAESEPENVVKSLIRLRESVSQQGDPMERVGFYFLEALYNRLSSCQAERTPSIFGTAPEELTLSYKAFNDACPYSKFAHLTANQAILEATEKATRIHIVDFGIVHGIQWAAFLQALATRSAGKPVSVRISGIPSVVLGNSPSASLLATGNRLRDFAKLLDLNFEFEPILTPVQELNGSSFRVDPDEILAVNFMLQLYNLLDETNVGVKTALSLAKSLNPSIVTLGEYEVNLNDVGFLQRFKNALKYYSTIFESLDPSLTRDSAERVQVERLILGRRIAGAVGLDDGGTRRECMEDKEHWKELMEGAGFKPVTLSHYAMSQAKILLWNYNYSSSFGLIDSAPGFLSLAWKDNPLLTVSSWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="25647" PGL_stop="25012"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25647" e_stop="25012"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="25647" e_stop="25012" e_length="636"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25647" stop="25012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547448" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCATCCCAACCCCCATACTCATACACAAGTGGTTATCTTCTTCCCCATCATTCTAATGATTTCAAAAATTTTAGTATCAGTGGTTATCTTCTTCCCCCAACATTCTAATGGTTTCAAAATTCTTAGCATTTTGTTTCATTTATAATTTTTTCGAAGAGATTCTTTTCCCCATTTTTCTCTACCAAAAAAAGAGATGAAGTAAAAAGTTATAATTAATAAAAAAATTGATAAAAAAATTGTCGGATTAAAGATGGAACTGTACAGAGAGGGGAAGGTAGTCATTAATGGAGTTAGAGGAAATGTATGTTTTGTTCCCGTTGAAGGCAGGGTAGTTTAGGTTTTACTTTTTTTTTATTCATTTTTTTTACTTTAATATAATTTTTATTTGTTTTACTTTATAATATAATGTTTAAATAATGTTTTGGATTAGAAAATAACACATGTCATTATTTGATTGGTCAAATTGACATGTCAGCGCGAGTGAATTTCACACATACTCTATTTTTTGTTTATTCTCAAAAAAATGTTCAAATGGTTGAAATTCAGAATAGTTGAAGTGTTCAATAGGTAGTACGTCTAGTTAAGGTGTCTAAATGAATAATCGGGACAAGTTTGAGGGGCCGCATATGACTTTG</gDNA_template>
            <first_frame> P  I  P  T  P  I  L  I  H  K  W  L  S  S  S  P  S  F  *  *  F  Q  K  F  *  Y  Q  W  L  S  S  S  P  N  I  L  M  V  S  K  F  L  A  F  C  F  I  Y  N  F  F  E  E  I  L  F  P  I  F  L  Y  Q  K  K  R  *  S  K  K  L  *  L  I  K  K  L  I  K  K  L  S  D  *  R  W  N  C  T  E  R  G  R  *  S  L  M  E  L  E  E  M  Y  V  L  F  P  L  K  A  G  *  F  R  F  Y  F  F  F  I  H  F  F  Y  F  N  I  I  F  I  C  F  T  L  *  Y  N  V  *  I  M  F  W  I  R  K  *  H  M  S  L  F  D  W  S  N  *  H  V  S  A  S  E  F  H  T  Y  S  I  F  C  L  F  S  K  K  C  S  N  G  *  N  S  E  *  L  K  C  S  I  G  S  T  S  S  *  G  V  *  M  N  N  R  D  K  F  E  G  P  H  M  T  L </first_frame>
            <second_frame>  P  S  Q  P  P  Y  S  Y  T  S  G  Y  L  L  P  H  H  S  N  D  F  K  N  F  S  I  S  G  Y  L  L  P  P  T  F  *  W  F  Q  N  S  *  H  F  V  S  F  I  I  F  S  K  R  F  F  S  P  F  F  S  T  K  K  R  D  E  V  K  S  Y  N  *  *  K  N  *  *  K  N  C  R  I  K  D  G  T  V  Q  R  G  E  G  S  H  *  W  S  *  R  K  C  M  F  C  S  R  *  R  Q  G  S  L  G  F  T  F  F  L  F  I  F  F  T  L  I  *  F  L  F  V  L  L  Y  N  I  M  F  K  *  C  F  G  L  E  N  N  T  C  H  Y  L  I  G  Q  I  D  M  S  A  R  V  N  F  T  H  T  L  F  F  V  Y  S  Q  K  N  V  Q  M  V  E  I  Q  N  S  *  S  V  Q  *  V  V  R  L  V  K  V  S  K  *  I  I  G  T  S  L  R  G  R  I  *  L   </second_frame>
            <third_frame>   H  P  N  P  H  T  H  T  Q  V  V  I  F  F  P  I  I  L  M  I  S  K  I  L  V  S  V  V  I  F  F  P  Q  H  S  N  G  F  K  I  L  S  I  L  F  H  L  *  F  F  R  R  D  S  F  P  H  F  S  L  P  K  K  E  M  K  *  K  V  I  I  N  K  K  I  D  K  K  I  V  G  L  K  M  E  L  Y  R  E  G  K  V  V  I  N  G  V  R  G  N  V  C  F  V  P  V  E  G  R  V  V  *  V  L  L  F  F  Y  S  F  F  L  L  *  Y  N  F  Y  L  F  Y  F  I  I  *  C  L  N  N  V  L  D  *  K  I  T  H  V  I  I  *  L  V  K  L  T  C  Q  R  E  *  I  S  H  I  L  Y  F  L  F  I  L  K  K  M  F  K  W  L  K  F  R  I  V  E  V  F  N  R  *  Y  V  *  L  R  C  L  N  E  *  S  G  Q  V  *  G  A  A  Y  D  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="36286" PGL_stop="29343"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
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            <exon e_start="30830" e_stop="30793"/>
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        </AGS_line>
        <SCR_line>
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          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="36286" e_stop="35975" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35535" e_stop="35368" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538"/>
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          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34829" e_stop="34742" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="34385" e_stop="34239" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="34050" e_stop="33910" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="33614" e_stop="33529" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="33439" e_stop="33347" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="33251" e_stop="33188" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="32984" e_stop="32841" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.943" acc_prob="0.895">
            <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="32082" e_stop="31895" e_length="188"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.999">
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          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="31780" e_stop="31606" e_length="175"/>
          </exon>
          <intron i_serial="11" don_prob="0.997" acc_prob="0.994">
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          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="31532" e_stop="31362" e_length="171"/>
          </exon>
          <intron i_serial="12" don_prob="0.987" acc_prob="0.929">
            <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="31203" e_stop="31134" e_length="70"/>
          </exon>
          <intron i_serial="13" don_prob="0.000" acc_prob="0.969">
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          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="31039" e_stop="30919" e_length="121"/>
          </exon>
          <intron i_serial="14" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="30830" e_stop="30793" e_length="38"/>
          </exon>
          <intron i_serial="15" don_prob="0.999" acc_prob="0.935">
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          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="29775" e_stop="29374" e_length="402"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36286" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36194" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
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              <exon start="34385" stop="34279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36183" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36169" stop="35975"/>
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              <exon start="34050" stop="33958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36168" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36165" stop="35975"/>
              <exon start="35535" stop="35368"/>
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              <exon start="33614" stop="33607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36158" stop="35975"/>
              <exon start="35535" stop="35368"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36126" stop="35975"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36024" stop="35975"/>
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              <exon start="34829" stop="34802"/>
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            <referenceDNA id="SGN-E567756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35454" stop="35368"/>
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              <exon start="32984" stop="32967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705698" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35368"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34780" stop="34742"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34342" stop="34239"/>
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              <exon start="32082" stop="32039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            <referenceDNA id="SGN-E709825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33206" stop="33188"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            <referenceDNA id="SGN-E471190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            <referenceDNA id="SGN-E704284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            <referenceDNA id="SGN-E280540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32917" stop="32841"/>
              <exon start="32082" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258482" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
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            <referenceDNA id="SGN-E699914" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E241684" strand="+"/>
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          <PGS_line>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32004" stop="31895"/>
              <exon start="31780" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31918" stop="31895"/>
              <exon start="31780" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31771" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327077" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31770" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31719" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31671" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31671" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31663" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31142" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29736" stop="29379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG : GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG : GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG : GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG : GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTACCCTG</gDNA_template>
            <first_frame> A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  V  S  R  S  M  T  M  E  I  R  E  G  R  G  V   : G  P  L  K  D  H  I  Y  L  H  L  N  H  L  P  P  E  V  L  K  E  R  L  P  G  I  S  E  T  A  A  I  F  A  G  V  D  V  T  K  E  P  I  P  V  L  P  T  V  H  Y  N  M  G  G  I  P  T  N  Y  H  G  Q  :  V  V  T  K  N  G  D  D  P  D  A  V  I  P  G  L  M  A  A  G  E  A  A  C  A  S  V  H  G  A  N  R  L  G  A  N  S  L  L  D  I  V  V  F  G  R  A  C  A  N  R  V  A  E  I  Q  K  P   : G  A  E  Q  K  P  L  E  K  D  A  G  E  R  T  I  A  W  L  D  K  I  R  N  S  N  G  S  L  P  T  S  K  I  R  L  D  M  Q  R  V  M  Q  N  N  A  A  V  F  R  T  Q  E  T  L  E  E   : G  C  Q  L  I  D  K  T  W  E  S  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y  I  L  Y  F  L  H  F  D  T  I  E  D  I  I  S  L  P   </first_frame>
            <second_frame>  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L  F  P  D  L  *  L  W  K  F  E  K  G  V  V  *  :  D  L  *  R  T  I  S  I  F  T  S  I  T  Y  L  Q  R  F  L  R  R  D  F  R  V  S  L  K  Q  L  P  F  S  L  V  L  M  *  L  R  N  Q  F  L  F  Y  L  P  C  I  I  I  W  E  E  S  Q  L  I  T  M  D  R :   W  S  L  K  T  G  M  I  Q  M  L  *  S  L  D  *  W  L  L  V  K  Q  H  A  H  L  F  M  V  P  I  V  L  V  Q  I  L  F  *  I  L  L  F  L  D  G  H  V  L  I  G  L  Q  R  S  K  N  Q  :  A  R  N  K  S  H  L  K  K  M  L  G  R  G  P  L  H  G  W  T  R  L  G  T  Q  M  V  H  C  P  P  Q  R  *  G  W  T  C  K  E  L  C  K  T  M  L  L  S  S  A  H  K  R  H  *  R  K  :  V  A  S  S  L  T  K  H  G  R  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  Y  S  T  S  C  I  L  T  R  L  K  T  L  S  H  Y  P  </second_frame>
            <third_frame>   R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C  C  F  Q  I  Y  D  Y  G  N  S  R  R  A  W  C  R :   T  F  E  G  P  Y  L  S  S  P  Q  S  L  T  S  R  G  S  *  G  E  T  S  G  Y  L  *  N  S  C  H  F  R  W  C  *  C  N  *  G  T  N  S  C  F  T  Y  R  A  L  *  Y  G  R  N  P  N  *  L  P  W  T   : G  G  H  *  K  R  G  *  S  R  C  C  D  P  W  T  D  G  C  W  *  S  S  M  R  I  C  S  W  C  Q  S  S  W  C  K  F  S  S  R  Y  C  C  F  W  T  G  M  C  *  *  G  C  R  D  P  K  T  R :   R  G  T  K  A  T  *  K  R  C  W  G  E  D  H  C  M  V  G  Q  D  *  E  L  K  W  F  I  A  H  L  K  D  K  A  G  H  A  K  S  Y  A  K  Q  C  C  C  L  P  H  T  R  D  I  R  G  R :   L  P  A  H  *  Q  N  M  G  E  F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  Y  T  L  L  L  A  F  *  H  D  *  R  H  Y  L  I  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36163" stop="35975"/>
                    <exon start="35535" stop="35368"/>
                    <exon start="34829" stop="34742"/>
                    <exon start="34385" stop="34239"/>
                    <exon start="34050" stop="33910"/>
                    <exon start="33614" stop="33529"/>
                    <exon start="33439" stop="33347"/>
                    <exon start="33251" stop="33188"/>
                    <exon start="32984" stop="32841"/>
                    <exon start="32082" stop="31895"/>
                    <exon start="31780" stop="31606"/>
                    <exon start="31532" stop="31362"/>
                    <exon start="31203" stop="31134"/>
                    <exon start="31039" stop="30919"/>
                    <exon start="30830" stop="30793"/>
                    <exon start="29775" stop="29673"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1983</number_coding_nucleotides>
                  <number_encoded_amino_acids>661</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVVTKNGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGAEQKPLEKDAGERTIAWLDKIRNSNGSLPTSKIRLDMQRVMQNNAAVFRTQETLEEGCQLIDKTWESFHDVQLKDRGLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTIGYWEDEKVRLEYRPVHMNTLDDEVESFPPKARVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
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          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
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          <exon-intron don_prob="0.000" acc_prob="0.921" e_score="0.997"/>
          <exon-only e_score="0.643"/>
        </SCR_line>
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            <gDNA_exon_coordinates>
              <exon start="31671" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31663" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31509" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29426"/>
              <exon start="29356" stop="29343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578187" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG : GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG : GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG : GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG : GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATA : AAAAACTAAGCAAG</gDNA_template>
            <first_frame> A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  V  S  R  S  M  T  M  E  I  R  E  G  R  G  V   : G  P  L  K  D  H  I  Y  L  H  L  N  H  L  P  P  E  V  L  K  E  R  L  P  G  I  S  E  T  A  A  I  F  A  G  V  D  V  T  K  E  P  I  P  V  L  P  T  V  H  Y  N  M  G  G  I  P  T  N  Y  H  G  Q  :  V  V  T  K  N  G  D  D  P  D  A  V  I  P  G  L  M  A  A  G  E  A  A  C  A  S  V  H  G  A  N  R  L  G  A  N  S  L  L  D  I  V  V  F  G  R  A  C  A  N  R  V  A  E  I  Q  K  P   : G  A  E  Q  K  P  L  E  K  D  A  G  E  R  T  I  A  W  L  D  K  I  R  N  S  N  G  S  L  P  T  S  K  I  R  L  D  M  Q  R  V  M  Q  N  N  A  A  V  F  R  T  Q  E  T  L  E  E   : G  C  Q  L  I  D  K  T  W  E  S  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y   : K  K  L  S  K </first_frame>
            <second_frame>  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L  F  P  D  L  *  L  W  K  F  E  K  G  V  V  *  :  D  L  *  R  T  I  S  I  F  T  S  I  T  Y  L  Q  R  F  L  R  R  D  F  R  V  S  L  K  Q  L  P  F  S  L  V  L  M  *  L  R  N  Q  F  L  F  Y  L  P  C  I  I  I  W  E  E  S  Q  L  I  T  M  D  R :   W  S  L  K  T  G  M  I  Q  M  L  *  S  L  D  *  W  L  L  V  K  Q  H  A  H  L  F  M  V  P  I  V  L  V  Q  I  L  F  *  I  L  L  F  L  D  G  H  V  L  I  G  L  Q  R  S  K  N  Q  :  A  R  N  K  S  H  L  K  K  M  L  G  R  G  P  L  H  G  W  T  R  L  G  T  Q  M  V  H  C  P  P  Q  R  *  G  W  T  C  K  E  L  C  K  T  M  L  L  S  S  A  H  K  R  H  *  R  K  :  V  A  S  S  L  T  K  H  G  R  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  :  K  N  *  A   </second_frame>
            <third_frame>   R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C  C  F  Q  I  Y  D  Y  G  N  S  R  R  A  W  C  R :   T  F  E  G  P  Y  L  S  S  P  Q  S  L  T  S  R  G  S  *  G  E  T  S  G  Y  L  *  N  S  C  H  F  R  W  C  *  C  N  *  G  T  N  S  C  F  T  Y  R  A  L  *  Y  G  R  N  P  N  *  L  P  W  T   : G  G  H  *  K  R  G  *  S  R  C  C  D  P  W  T  D  G  C  W  *  S  S  M  R  I  C  S  W  C  Q  S  S  W  C  K  F  S  S  R  Y  C  C  F  W  T  G  M  C  *  *  G  C  R  D  P  K  T  R :   R  G  T  K  A  T  *  K  R  C  W  G  E  D  H  C  M  V  G  Q  D  *  E  L  K  W  F  I  A  H  L  K  D  K  A  G  H  A  K  S  Y  A  K  Q  C  C  C  L  P  H  T  R  D  I  R  G  R :   L  P  A  H  *  Q  N  M  G  E  F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  * :   K  T  K  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36163" stop="35975"/>
                    <exon start="35535" stop="35368"/>
                    <exon start="34829" stop="34742"/>
                    <exon start="34385" stop="34239"/>
                    <exon start="34050" stop="33910"/>
                    <exon start="33614" stop="33529"/>
                    <exon start="33439" stop="33347"/>
                    <exon start="33251" stop="33188"/>
                    <exon start="32984" stop="32841"/>
                    <exon start="32082" stop="31895"/>
                    <exon start="31780" stop="31606"/>
                    <exon start="31532" stop="31362"/>
                    <exon start="31203" stop="31134"/>
                    <exon start="31039" stop="30919"/>
                    <exon start="30830" stop="30793"/>
                    <exon start="29775" stop="29673"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1983</number_coding_nucleotides>
                  <number_encoded_amino_acids>661</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVVTKNGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGAEQKPLEKDAGERTIAWLDKIRNSNGSLPTSKIRLDMQRVMQNNAAVFRTQETLEEGCQLIDKTWESFHDVQLKDRGLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTIGYWEDEKVRLEYRPVHMNTLDDEVESFPPKARVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="36286" e_stop="35975"/>
            <exon e_start="35535" e_stop="35368"/>
            <exon e_start="34829" e_stop="34742"/>
            <exon e_start="34385" e_stop="34239"/>
            <exon e_start="34050" e_stop="33910"/>
            <exon e_start="33614" e_stop="33529"/>
            <exon e_start="33439" e_stop="33347"/>
            <exon e_start="33251" e_stop="33188"/>
            <exon e_start="32984" e_stop="32841"/>
            <exon e_start="32082" e_stop="31895"/>
            <exon e_start="31780" e_stop="31362"/>
            <exon e_start="31203" e_stop="31134"/>
            <exon e_start="31039" e_stop="30919"/>
            <exon e_start="30830" e_stop="30793"/>
            <exon e_start="29775" e_stop="29426"/>
            <exon e_start="29356" e_stop="29343"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.977" e_score="0.955"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.895" e_score="0.993"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.929" e_score="0.933"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.921" e_score="0.997"/>
          <exon-only e_score="0.643"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="36286" e_stop="35975" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35535" e_stop="35368" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34829" e_stop="34742" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="34385" e_stop="34239" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="34050" e_stop="33910" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="33614" e_stop="33529" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="33439" e_stop="33347" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="33251" e_stop="33188" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203"/>
          </intron>
          <exon e_serial="9" e_score="0.993">
            <gDNA_exon_boundary e_start="32984" e_stop="32841" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.943" acc_prob="0.895">
            <gDNA_intron_boundary i_start="32840" i_stop="32083" i_length="758"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="32082" e_stop="31895" e_length="188"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114"/>
          </intron>
          <exon e_serial="11" e_score="0.933">
            <gDNA_exon_boundary e_start="31780" e_stop="31362" e_length="419"/>
          </exon>
          <intron i_serial="11" don_prob="0.987" acc_prob="0.929">
            <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="31203" e_stop="31134" e_length="70"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="31039" e_stop="30919" e_length="121"/>
          </exon>
          <intron i_serial="13" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="30830" e_stop="30793" e_length="38"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017"/>
          </intron>
          <exon e_serial="15" e_score="0.997">
            <gDNA_exon_boundary e_start="29775" e_stop="29426" e_length="350"/>
          </exon>
          <intron i_serial="15" don_prob="0.000" acc_prob="0.921">
            <gDNA_intron_boundary i_start="29425" i_stop="29357" i_length="69"/>
          </intron>
          <exon e_serial="16" e_score="0.643">
            <gDNA_exon_boundary e_start="29356" e_stop="29343" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36286" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36194" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36183" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36169" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36168" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36165" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36158" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36126" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36024" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35454" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705698" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35450" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34780" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34342" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32841"/>
              <exon start="32082" stop="32039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33418" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32841"/>
              <exon start="32082" stop="31895"/>
              <exon start="31780" stop="31667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33415" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32841"/>
              <exon start="32082" stop="31895"/>
              <exon start="31780" stop="31632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32975" stop="32841"/>
              <exon start="32082" stop="31895"/>
              <exon start="31780" stop="31719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32917" stop="32841"/>
              <exon start="32082" stop="31981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31775" stop="31387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31509" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29426"/>
              <exon start="29356" stop="29343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578187" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG : GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG : GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG : GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATA : AAAAACTAAGCAAG</gDNA_template>
            <first_frame> A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  V  S  R  S  M  T  M  E  I  R  E  G  R  G  V   : G  P  L  K  D  H  I  Y  L  H  L  N  H  L  P  P  E  V  L  K  E  R  L  P  G  I  S  E  T  A  A  I  F  A  G  V  D  V  T  K  E  P  I  P  V  L  P  T  V  H  Y  N  M  G  G  I  P  T  N  Y  H  G  Q  :  V  V  T  K  N  G  D  D  P  D  A  V  I  P  G  L  M  A  A  G  E  A  A  C  A  S  V  H  G  A  N  R  L  G  A  N  S  L  L  D  I  V  V  F  G  R  A  C  A  N  R  V  A  E  I  Q  K  P  G  *  R  I  C  L  Y  N  F  *  A  C  I  T  C  L  R  F  L  N  F  H  I  S  R  R  G  T  K  A  T  *  K  R  C  W  G  E  D  H  C  M  V  G  Q  D  *  E  L  K  W  F  I  A  H  L  K  D  K  A  G  H  A  K  S  Y  A  K  Q  C  C  C  L  P  H  T  R  D  I  R  G  R :   L  P  A  H  *  Q  N  M  G  E  F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  * :   K  T  K  Q  </first_frame>
            <second_frame>  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L  F  P  D  L  *  L  W  K  F  E  K  G  V  V  *  :  D  L  *  R  T  I  S  I  F  T  S  I  T  Y  L  Q  R  F  L  R  R  D  F  R  V  S  L  K  Q  L  P  F  S  L  V  L  M  *  L  R  N  Q  F  L  F  Y  L  P  C  I  I  I  W  E  E  S  Q  L  I  T  M  D  R :   W  S  L  K  T  G  M  I  Q  M  L  *  S  L  D  *  W  L  L  V  K  Q  H  A  H  L  F  M  V  P  I  V  L  V  Q  I  L  F  *  I  L  L  F  L  D  G  H  V  L  I  G  L  Q  R  S  K  N  Q  V  R  E  F  V  Y  I  I  F  R  H  A  *  H  V  *  D  F  *  T  F  I  S  P  G  A  E  Q  K  P  L  E  K  D  A  G  E  R  T  I  A  W  L  D  K  I  R  N  S  N  G  S  L  P  T  S  K  I  R  L  D  M  Q  R  V  M  Q  N  N  A  A  V  F  R  T  Q  E  T  L  E  E   : G  C  Q  L  I  D  K  T  W  E  S  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y   : K  K  L  S  K </second_frame>
            <third_frame>   R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C  C  F  Q  I  Y  D  Y  G  N  S  R  R  A  W  C  R :   T  F  E  G  P  Y  L  S  S  P  Q  S  L  T  S  R  G  S  *  G  E  T  S  G  Y  L  *  N  S  C  H  F  R  W  C  *  C  N  *  G  T  N  S  C  F  T  Y  R  A  L  *  Y  G  R  N  P  N  *  L  P  W  T   : G  G  H  *  K  R  G  *  S  R  C  C  D  P  W  T  D  G  C  W  *  S  S  M  R  I  C  S  W  C  Q  S  S  W  C  K  F  S  S  R  Y  C  C  F  W  T  G  M  C  *  *  G  C  R  D  P  K  T  R  L  E  N  L  F  I  *  F  L  G  M  H  N  M  F  K  I  S  E  L  S  Y  L  Q  A  R  N  K  S  H  L  K  K  M  L  G  R  G  P  L  H  G  W  T  R  L  G  T  Q  M  V  H  C  P  P  Q  R  *  G  W  T  C  K  E  L  C  K  T  M  L  L  S  S  A  H  K  R  H  *  R  K  :  V  A  S  S  L  T  K  H  G  R  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  :  K  N  *  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36163" stop="35975"/>
                    <exon start="35535" stop="35368"/>
                    <exon start="34829" stop="34742"/>
                    <exon start="34385" stop="34239"/>
                    <exon start="34050" stop="33910"/>
                    <exon start="33614" stop="33529"/>
                    <exon start="33439" stop="33347"/>
                    <exon start="33251" stop="33188"/>
                    <exon start="32984" stop="32841"/>
                    <exon start="32082" stop="31895"/>
                    <exon start="31780" stop="31601"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1485</number_coding_nucleotides>
                  <number_encoded_amino_acids>495</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVVTKNGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31548" stop="31362"/>
                    <exon start="31203" stop="31134"/>
                    <exon start="31039" stop="30919"/>
                    <exon start="30830" stop="30793"/>
                    <exon start="29775" stop="29673"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TFISPGAEQKPLEKDAGERTIAWLDKIRNSNGSLPTSKIRLDMQRVMQNNAAVFRTQETLEEGCQLIDKTWESFHDVQLKDRGLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTIGYWEDEKVRLEYRPVHMNTLDDEVESFPPKARVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="36286" e_stop="35975"/>
            <exon e_start="35535" e_stop="35368"/>
            <exon e_start="34829" e_stop="34742"/>
            <exon e_start="34385" e_stop="34239"/>
            <exon e_start="34050" e_stop="33910"/>
            <exon e_start="33614" e_stop="33529"/>
            <exon e_start="33439" e_stop="33347"/>
            <exon e_start="33251" e_stop="33188"/>
            <exon e_start="32984" e_stop="32887"/>
            <exon e_start="31173" e_stop="31134"/>
            <exon e_start="31039" e_stop="30919"/>
            <exon e_start="30830" e_stop="30793"/>
            <exon e_start="29775" e_stop="29374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.977" e_score="0.955"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="36286" e_stop="35975" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35535" e_stop="35368" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34829" e_stop="34742" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="34385" e_stop="34239" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="34050" e_stop="33910" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="33614" e_stop="33529" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="33439" e_stop="33347" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="33346" i_stop="33252" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="33251" e_stop="33188" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33187" i_stop="32985" i_length="203"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="32984" e_stop="32887" e_length="98"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="32886" i_stop="31174" i_length="1713"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="31173" e_stop="31134" e_length="40"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="31039" e_stop="30919" e_length="121"/>
          </exon>
          <intron i_serial="11" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="30830" e_stop="30793" e_length="38"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="29775" e_stop="29374" e_length="402"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36286" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36194" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36183" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36169" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36168" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36165" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36158" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36126" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36024" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35454" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705698" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34824" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33188"/>
              <exon start="32984" stop="32887"/>
              <exon start="31173" stop="31134"/>
              <exon start="31039" stop="30961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34780" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33347"/>
              <exon start="33251" stop="33196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31142" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29736" stop="29379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTT : GTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTACCCTG</gDNA_template>
            <first_frame> A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  :  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  Y  S  T  S  C  I  L  T  R  L  K  T  L  S  H  Y  P  </first_frame>
            <second_frame>  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L :   F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  Y  T  L  L  L  A  F  *  H  D  *  R  H  Y  L  I  T  L </second_frame>
            <third_frame>   R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C   : C  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y  I  L  Y  F  L  H  F  D  T  I  E  D  I  I  S  L  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36163" stop="35975"/>
                    <exon start="35535" stop="35368"/>
                    <exon start="34829" stop="34742"/>
                    <exon start="34385" stop="34239"/>
                    <exon start="34050" stop="33910"/>
                    <exon start="33614" stop="33529"/>
                    <exon start="33439" stop="33347"/>
                    <exon start="33251" stop="33188"/>
                    <exon start="32984" stop="32887"/>
                    <exon start="31173" stop="31153"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1092</number_coding_nucleotides>
                  <number_encoded_amino_acids>364</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSMMFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="32092" e_stop="31895"/>
            <exon e_start="31780" e_stop="31606"/>
            <exon e_start="31532" e_stop="31362"/>
            <exon e_start="31203" e_stop="31134"/>
            <exon e_start="31039" e_stop="30919"/>
            <exon e_start="30830" e_stop="30793"/>
            <exon e_start="29775" e_stop="29374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="32092" e_stop="31895" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31894" i_stop="31781" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31780" e_stop="31606" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="31605" i_stop="31533" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31532" e_stop="31362" e_length="171"/>
          </exon>
          <intron i_serial="3" don_prob="0.987" acc_prob="0.929">
            <gDNA_intron_boundary i_start="31361" i_stop="31204" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31203" e_stop="31134" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="31133" i_stop="31040" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31039" e_stop="30919" e_length="121"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30830" e_stop="30793" e_length="38"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="30792" i_stop="29776" i_length="1017"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="29775" e_stop="29374" e_length="402"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32092" stop="31895"/>
              <exon start="31780" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32078" stop="31895"/>
              <exon start="31780" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32004" stop="31895"/>
              <exon start="31780" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31918" stop="31895"/>
              <exon start="31780" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31771" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327077" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31770" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31719" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31671" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31671" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31663" stop="31606"/>
              <exon start="31532" stop="31362"/>
              <exon start="31203" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31142" stop="31134"/>
              <exon start="31039" stop="30919"/>
              <exon start="30830" stop="30793"/>
              <exon start="29775" stop="29374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29736" stop="29379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29505"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29727" stop="29509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432879" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG : GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG : GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG : GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGACACGATTGAAGACATTATCTCATTACCCTG</gDNA_template>
            <first_frame> L  L  V  G  P  L  K  D  H  I  Y  L  H  L  N  H  L  P  P  E  V  L  K  E  R  L  P  G  I  S  E  T  A  A  I  F  A  G  V  D  V  T  K  E  P  I  P  V  L  P  T  V  H  Y  N  M  G  G  I  P  T  N  Y  H  G  Q  :  V  V  T  K  N  G  D  D  P  D  A  V  I  P  G  L  M  A  A  G  E  A  A  C  A  S  V  H  G  A  N  R  L  G  A  N  S  L  L  D  I  V  V  F  G  R  A  C  A  N  R  V  A  E  I  Q  K  P   : G  A  E  Q  K  P  L  E  K  D  A  G  E  R  T  I  A  W  L  D  K  I  R  N  S  N  G  S  L  P  T  S  K  I  R  L  D  M  Q  R  V  M  Q  N  N  A  A  V  F  R  T  Q  E  T  L  E  E   : G  C  Q  L  I  D  K  T  W  E  S  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y  I  L  Y  F  L  H  F  D  T  I  E  D  I  I  S  L  P   </first_frame>
            <second_frame>  F  W  *  D  L  *  R  T  I  S  I  F  T  S  I  T  Y  L  Q  R  F  L  R  R  D  F  R  V  S  L  K  Q  L  P  F  S  L  V  L  M  *  L  R  N  Q  F  L  F  Y  L  P  C  I  I  I  W  E  E  S  Q  L  I  T  M  D  R :   W  S  L  K  T  G  M  I  Q  M  L  *  S  L  D  *  W  L  L  V  K  Q  H  A  H  L  F  M  V  P  I  V  L  V  Q  I  L  F  *  I  L  L  F  L  D  G  H  V  L  I  G  L  Q  R  S  K  N  Q  :  A  R  N  K  S  H  L  K  K  M  L  G  R  G  P  L  H  G  W  T  R  L  G  T  Q  M  V  H  C  P  P  Q  R  *  G  W  T  C  K  E  L  C  K  T  M  L  L  S  S  A  H  K  R  H  *  R  K  :  V  A  S  S  L  T  K  H  G  R  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  Y  S  T  S  C  I  L  T  R  L  K  T  L  S  H  Y  P  </second_frame>
            <third_frame>   F  G  R  T  F  E  G  P  Y  L  S  S  P  Q  S  L  T  S  R  G  S  *  G  E  T  S  G  Y  L  *  N  S  C  H  F  R  W  C  *  C  N  *  G  T  N  S  C  F  T  Y  R  A  L  *  Y  G  R  N  P  N  *  L  P  W  T   : G  G  H  *  K  R  G  *  S  R  C  C  D  P  W  T  D  G  C  W  *  S  S  M  R  I  C  S  W  C  Q  S  S  W  C  K  F  S  S  R  Y  C  C  F  W  T  G  M  C  *  *  G  C  R  D  P  K  T  R :   R  G  T  K  A  T  *  K  R  C  W  G  E  D  H  C  M  V  G  Q  D  *  E  L  K  W  F  I  A  H  L  K  D  K  A  G  H  A  K  S  Y  A  K  Q  C  C  C  L  P  H  T  R  D  I  R  G  R :   L  P  A  H  *  Q  N  M  G  E  F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  Y  T  L  L  L  A  F  *  H  D  *  R  H  Y  L  I  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32092" stop="31895"/>
                    <exon start="31780" stop="31606"/>
                    <exon start="31532" stop="31362"/>
                    <exon start="31203" stop="31134"/>
                    <exon start="31039" stop="30919"/>
                    <exon start="30830" stop="30793"/>
                    <exon start="29775" stop="29673"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVVTKNGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGAEQKPLEKDAGERTIAWLDKIRNSNGSLPTSKIRLDMQRVMQNNAAVFRTQETLEEGCQLIDKTWESFHDVQLKDRGLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTIGYWEDEKVRLEYRPVHMNTLDDEVESFPPKARVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="36286" e_stop="35975"/>
            <exon e_start="35535" e_stop="35368"/>
            <exon e_start="34829" e_stop="34742"/>
            <exon e_start="34385" e_stop="34239"/>
            <exon e_start="34050" e_stop="33910"/>
            <exon e_start="33614" e_stop="33529"/>
            <exon e_start="33439" e_stop="33382"/>
            <exon e_start="30938" e_stop="30919"/>
            <exon e_start="30830" e_stop="30793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.977" e_score="0.955"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="0.986"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="36286" e_stop="35975" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="35974" i_stop="35536" i_length="439"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35535" e_stop="35368" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="35367" i_stop="34830" i_length="538"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34829" e_stop="34742" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="34741" i_stop="34386" i_length="356"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="34385" e_stop="34239" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="34238" i_stop="34051" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="34050" e_stop="33910" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="33909" i_stop="33615" i_length="295"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="33614" e_stop="33529" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="33528" i_stop="33440" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="33439" e_stop="33382" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33381" i_stop="30939" i_length="2443"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="30938" e_stop="30919" e_length="20"/>
          </exon>
          <intron i_serial="8" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30918" i_stop="30831" i_length="88"/>
          </intron>
          <exon e_serial="9" e_score="0.974">
            <gDNA_exon_boundary e_start="30830" e_stop="30793" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36286" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36194" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36184" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36183" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36169" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36168" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36165" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36158" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36126" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36024" stop="35975"/>
              <exon start="35535" stop="35368"/>
              <exon start="34829" stop="34802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35482" stop="35368"/>
              <exon start="34829" stop="34742"/>
              <exon start="34385" stop="34239"/>
              <exon start="34050" stop="33910"/>
              <exon start="33614" stop="33529"/>
              <exon start="33439" stop="33382"/>
              <exon start="30938" stop="30919"/>
              <exon start="30830" stop="30793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348802" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTA : ATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG</gDNA_template>
            <first_frame> A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G   : N  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I   </first_frame>
            <second_frame>  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  :  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *  </second_frame>
            <third_frame>   R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  * :   C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36163" stop="35975"/>
                    <exon start="35535" stop="35368"/>
                    <exon start="34829" stop="34742"/>
                    <exon start="34385" stop="34239"/>
                    <exon start="34050" stop="33910"/>
                    <exon start="33614" stop="33529"/>
                    <exon start="33439" stop="33382"/>
                    <exon start="30938" stop="30919"/>
                    <exon start="30830" stop="30795"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>933</number_coding_nucleotides>
                  <number_encoded_amino_acids>311</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAREDFTKRDDEKWMKHTI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="30619" e_stop="30066"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="30619" e_stop="30066" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30619" stop="30066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTC</gDNA_template>
            <first_frame> *  C  D  L  T  S  G  I  W  K  G  G  V  Y  A  D  L  T  P  T  L  L  R  *  K  S  S  F  *  Q  I  L  G  S  R  K  A  *  S  K  T  D  L  T  N  T  K  V  K  A  I  V  K  I  L  W  K  *  E  V  G  A  T  K  T  I  K  I  A  S  V  K  E  T  T  T  K  I  A  E  K  L  K  N  R  I  I  I  I  I  I  L  I  R  G  S  K  Q  G  A  L  S  *  *  P  G  T  M  L  S  R  G  K  E  R  N  C  L  I  T  Y  *  P  P  L  P  C  L  H  V  F  P  S  L  V  M  F  S  M  S  *  R  C  V  I  L  C  L  N  C  F  S  P  I  L  F  R  S  T  S  T  S  C  W  A  H  H  W  Q  P  L  S  S  L  T  S  S  L  E  L  L  C  S  F   </first_frame>
            <second_frame>  S  V  I  S  Q  V  E  F  G  K  V  G  C  M  Q  T  L  R  R  P  C  *  G  R  K  V  V  S  D  R  S  S  A  Q  E  K  H  D  L  K  L  I  *  Q  I  L  K  *  K  L  *  *  K  F  Y  G  N  E  K  *  G  Q  Q  K  Q  *  R  *  P  Q  *  K  R  Q  Q  Q  K  *  L  K  N  *  R  I  G  *  *  *  *  *  F  *  *  E  G  A  N  K  V  L  *  A  S  S  L  E  P  C  S  P  V  G  K  R  E  I  A  *  L  P  T  N  P  L  Y  P  A  F  M  F  S  H  L  W  S  C  S  Q  *  A  E  D  V  L  Y  Y  V  L  I  V  S  P  Q  F  F  F  G  L  P  L  P  L  V  G  P  I  T  G  S  L  S  Q  V  S  P  L  H  W  N  F  C  V  P  S  </second_frame>
            <third_frame>   V  *  S  H  K  W  N  L  E  R  W  G  V  C  R  P  Y  A  D  L  V  E  V  E  K  *  F  L  T  D  P  R  L  K  K  S  M  I  *  N  *  S  D  K  Y  *  S  K  S  Y  S  E  N  F  M  E  M  R  S  R  G  N  K  N  N  K  D  S  L  S  K  R  D  N  N  K  N  S  *  K  T  E  E  *  D  N  N  N  N  N  S  D  K  R  E  Q  T  R  C  S  K  L  V  A  W  N  H  A  L  P  W  E  R  E  K  L  L  D  Y  L  L  T  P  S  T  L  P  S  C  F  P  I  F  G  H  V  L  N  E  L  K  M  C  Y  I  M  S  *  L  F  L  P  N  S  F  S  V  Y  L  Y  L  L  L  G  P  S  L  A  A  S  L  K  S  H  L  F  I  G  T  F  V  F  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="29505" PGL_stop="29727"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29505" e_stop="29727"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="29505" e_stop="29727" e_length="223"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29505" stop="29727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432880" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACGGTGTTCTGCTTCTAATATTTATGAACACTTCACAGGCTGCTTACAATTCATCGCACAAATAAATCAAACAGTTATTACCAAAATTTCACAATTTTCGCGATTTATTGCAACCTTCCTTATTATCAACTTCTACGCCATCCAAATCCCCCTATAAATGAGTATATCAGTAGACACGAGCCTTTGGTGGGAACGACTCGACTTCGTCATCTAGAGTGTTC</gDNA_template>
            <first_frame> K  R  C  S  A  S  N  I  Y  E  H  F  T  G  C  L  Q  F  I  A  Q  I  N  Q  T  V  I  T  K  I  S  Q  F  S  R  F  I  A  T  F  L  I  I  N  F  Y  A  I  Q  I  P  L  *  M  S  I  S  V  D  T  S  L  W  W  E  R  L  D  F  V  I  *  S  V  </first_frame>
            <second_frame>  N  G  V  L  L  L  I  F  M  N  T  S  Q  A  A  Y  N  S  S  H  K  *  I  K  Q  L  L  P  K  F  H  N  F  R  D  L  L  Q  P  S  L  L  S  T  S  T  P  S  K  S  P  Y  K  *  V  Y  Q  *  T  R  A  F  G  G  N  D  S  T  S  S  S  R  V  F </second_frame>
            <third_frame>   T  V  F  C  F  *  Y  L  *  T  L  H  R  L  L  T  I  H  R  T  N  K  S  N  S  Y  Y  Q  N  F  T  I  F  A  I  Y  C  N  L  P  Y  Y  Q  L  L  R  H  P  N  P  P  I  N  E  Y  I  S  R  H  E  P  L  V  G  T  T  R  L  R  H  L  E  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29534" stop="29725"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLHRLLTIHRTNKSNSYYQNFTIFAIYCNLPYYQLLRHPNPPINEYISRHEPLVGTTRLRHLEC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="46597" PGL_stop="45046"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46597" e_stop="46335"/>
            <exon e_start="46268" e_stop="45944"/>
            <exon e_start="45657" e_stop="45505"/>
            <exon e_start="45399" e_stop="45177"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="0.982"/>
          <exon-intron don_prob="0.854" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46597" e_stop="46335" e_length="263"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46334" i_stop="46269" i_length="66"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="46268" e_stop="45944" e_length="325"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="45943" i_stop="45658" i_length="286"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="45657" e_stop="45505" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="0.854" acc_prob="0.983">
            <gDNA_intron_boundary i_start="45504" i_stop="45400" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="45399" e_stop="45177" e_length="223"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46597" stop="46335"/>
              <exon start="46268" stop="45975"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269271" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46579" stop="46335"/>
              <exon start="46268" stop="45944"/>
              <exon start="45657" stop="45505"/>
              <exon start="45399" stop="45379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409145" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46578" stop="46335"/>
              <exon start="46268" stop="45944"/>
              <exon start="45657" stop="45611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46570" stop="46335"/>
              <exon start="46268" stop="45944"/>
              <exon start="45657" stop="45540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46565" stop="46335"/>
              <exon start="46268" stop="46009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46246" stop="46008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272859" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46193" stop="45944"/>
              <exon start="45657" stop="45505"/>
              <exon start="45399" stop="45177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258650" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAG : GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG : TTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG : TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTG</gDNA_template>
            <first_frame> L  L  S  V  E  T  E  K  E  E  E  R  N  R  E  E  G  I  T  S  M  S  D  L  E  F  F  L  F  L  I  P  P  I  L  A  V  L  I  I  L  N  L  F  K  R  K  H  N  F  Q  N  L  P  P  G  D  M  G  W  P  F  L  G  E  T  I  G  Y  L  R  P  Y  S  A  T  T  I  G  D  F  M  Q  D  H  I  S  R :   Y  G  K  I  F  K  S  N  L  F  G  E  P  T  I  V  S  A  D  A  G  L  N  R  Y  I  L  Q  N  E  G  R  L  F  E  C  N  Y  P  R  S  I  G  G  I  L  G  K  W  S  M  L  V  Q  V  G  Q  M  H  R  D  M  R  M  I  S  L  N  F  L  S  N  A  R  L  R  N  Q  L  L  S  E  V  E  K  H  T  L  L  V  L  G  S  W  K  Q  D  S  V  V  C  A  Q  D  E  A  K  K  :  L  T  F  N  F  M  A  E  H  I  M  S  L  Q  P  G  N  P  E  T  E  K  L  K  K  E  Y  I  T  F  M  K  G  V  V  S  A  P  L  N  F  P  G  T  A  Y  R  K  A  L  Q  :  S  R  S  T  I  L  G  F  I  E  R  K  M  E  E  R  L  K  E  M  N  R  N  E  N  D  L  L  G  W  V  L  K  N  S  N  L  S  K  E  Q  I  L  D  L  L  L  S  L  L  F  A  G  H  E  T  S  S  V  A  I  A  L  S  I  F  L  L  E  S  C  P  A  A  </first_frame>
            <second_frame>  Y  *  V  L  K  L  K  K  K  K  K  E  I  E  K  K  E  *  H  Q  C  L  T  *  S  F  F  F  F  L  F  L  Q  S  *  Q  Y  L  *  F  L  I  Y  S  K  E  N  T  T  F  K  I  F  H  Q  G  I  W  V  G  L  F  L  V  K  L  L  V  I  *  D  L  I  Q  L  L  L  L  E  I  S  C  K  I  I  F  L   : G  M  G  K  F  S  S  Q  I  C  L  E  S  Q  Q  *  F  Q  Q  M  Q  G  *  T  D  T  F  C  R  M  K  G  D  Y  L  S  V  I  I  Q  E  V  *  V  G  Y  L  V  N  G  L  C  *  F  K  L  D  K  C  I  E  I  *  G  *  F  L  *  I  F  *  A  M  L  G  *  G  I  N  F  *  V  K  L  K  S  I  L  C  L  F  L  A  L  G  N  R  I  L  L  F  V  H  K  M  K  Q  R  S :   *  H  S  T  L  W  Q  S  I  S  *  V  Y  N  L  E  I  Q  R  Q  R  S  *  K  K  S  T  S  H  L  *  K  E  W  F  L  L  H  *  I  F  Q  E  Q  L  T  E  R  P  Y  S :   L  D  Q  Q  F  L  D  L  L  R  E  K  W  R  R  G  L  R  K  *  T  E  T  K  T  T  F  *  V  G  F  *  R  I  Q  I  S  Q  K  S  K  F  L  I  C  Y  *  V  C  S  L  L  A  M  K  L  H  Q  *  Q  *  L  C  L  F  S  Y  S  K  A  V  L  L  L </second_frame>
            <third_frame>   I  E  C  *  N  *  K  R  R  R  K  K  *  R  R  R  N  N  I  N  V  *  L  R  V  F  S  F  S  Y  S  S  N  L  S  S  T  Y  N  S  *  S  I  Q  K  K  T  Q  L  S  K  S  S  T  R  G  Y  G  L  A  F  S  W  *  N  Y  W  L  F  E  T  L  F  S  Y  Y  Y  W  R  F  H  A  R  S  Y  F  *  :  V  W  E  N  F  Q  V  K  F  V  W  R  A  N  N  S  F  S  R  C  R  A  K  Q  I  H  S  A  E  *  R  E  I  I  *  V  *  L  S  K  K  Y  R  W  D  T  W  *  M  V  Y  V  S  S  S  W  T  N  A  *  R  Y  E  D  D  F  S  E  F  F  E  Q  C  *  A  K  E  S  T  F  K  *  S  *  K  A  Y  F  A  C  S  W  L  L  E  T  G  F  C  C  L  C  T  R  *  S  K  E   : V  N  I  Q  L  Y  G  R  A  Y  H  E  S  T  T  W  K  S  R  D  R  E  A  E  K  R  V  H  H  I  Y  E  R  S  G  F  C  S  I  E  F  S  R  N  S  L  Q  K  G  L  T   : V  S  I  N  N  S  W  I  Y  *  E  K  N  G  G  E  A  *  G  N  E  Q  K  R  K  R  P  S  R  L  G  S  E  E  F  K  S  L  K  R  A  N  S  *  F  A  T  E  F  A  L  C  W  P  *  N  F  I  S  S  N  S  S  V  Y  F  L  T  R  K  L  S  C  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46597" stop="46335"/>
                    <exon start="46268" stop="45944"/>
                    <exon start="45657" stop="45505"/>
                    <exon start="45399" stop="45178"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>963</number_coding_nucleotides>
                  <number_encoded_amino_acids>321</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSVETEKEEERNREEGITSMSDLEFFLFLIPPILAVLIILNLFKRKHNFQNLPPGDMGWPFLGETIGYLRPYSATTIGDFMQDHISRYGKIFKSNLFGEPTIVSADAGLNRYILQNEGRLFECNYPRSIGGILGKWSMLVQVGQMHRDMRMISLNFLSNARLRNQLLSEVEKHTLLVLGSWKQDSVVCAQDEAKKLTFNFMAEHIMSLQPGNPETEKLKKEYITFMKGVVSAPLNFPGTAYRKALQSRSTILGFIERKMEERLKEMNRNENDLLGWVLKNSNLSKEQILDLLLSLLFAGHETSSVAIALSIFLLESCPAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="45667" e_stop="45505"/>
            <exon e_start="45399" e_stop="45163"/>
            <exon e_start="45076" e_stop="45046"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.854" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="45667" e_stop="45505" e_length="163"/>
          </exon>
          <intron i_serial="1" don_prob="0.854" acc_prob="0.983">
            <gDNA_intron_boundary i_start="45504" i_stop="45400" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="45399" e_stop="45163" e_length="237"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="45162" i_stop="45077" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="45076" e_stop="45046" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45667" stop="45505"/>
              <exon start="45399" stop="45163"/>
              <exon start="45076" stop="45046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272147" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG : TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACA : GAAGAGCACTTGGAGATTTCCCGGGCAAAAA</gDNA_template>
            <first_frame> I  S  T  V  N  I  Q  L  Y  G  R  A  Y  H  E  S  T  T  W  K  S  R  D  R  E  A  E  K  R  V  H  H  I  Y  E  R  S  G  F  C  S  I  E  F  S  R  N  S  L  Q  K  G  L  T   : V  S  I  N  N  S  W  I  Y  *  E  K  N  G  G  E  A  *  G  N  E  Q  K  R  K  R  P  S  R  L  G  S  E  E  F  K  S  L  K  R  A  N  S  *  F  A  T  E  F  A  L  C  W  P  *  N  F  I  S  S  N  S  S  V  Y  F  L  T  R  K  L  S  C  C  C  S  T  I  N   : R  R  A  L  G  D  F  P  G  K   </first_frame>
            <second_frame>  F  L  Q  L  T  F  N  F  M  A  E  H  I  M  S  L  Q  P  G  N  P  E  T  E  K  L  K  K  E  Y  I  T  F  M  K  G  V  V  S  A  P  L  N  F  P  G  T  A  Y  R  K  A  L  Q  :  S  R  S  T  I  L  G  F  I  E  R  K  M  E  E  R  L  K  E  M  N  R  N  E  N  D  L  L  G  W  V  L  K  N  S  N  L  S  K  E  Q  I  L  D  L  L  L  S  L  L  F  A  G  H  E  T  S  S  V  A  I  A  L  S  I  F  L  L  E  S  C  P  A  A  V  Q  Q  L  T  :  E  E  H  L  E  I  S  R  A  K  </second_frame>
            <third_frame>   F  Y  S  *  H  S  T  L  W  Q  S  I  S  *  V  Y  N  L  E  I  Q  R  Q  R  S  *  K  K  S  T  S  H  L  *  K  E  W  F  L  L  H  *  I  F  Q  E  Q  L  T  E  R  P  Y  S :   L  D  Q  Q  F  L  D  L  L  R  E  K  W  R  R  G  L  R  K  *  T  E  T  K  T  T  F  *  V  G  F  *  R  I  Q  I  S  Q  K  S  K  F  L  I  C  Y  *  V  C  S  L  L  A  M  K  L  H  Q  *  Q  *  L  C  L  F  S  Y  S  K  A  V  L  L  L  F  N  N  *  Q :   K  S  T  W  R  F  P  G  Q  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45666" stop="45505"/>
                    <exon start="45399" stop="45163"/>
                    <exon start="45076" stop="45047"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLQLTFNFMAEHIMSLQPGNPETEKLKKEYITFMKGVVSAPLNFPGTAYRKALQSRSTILGFIERKMEERLKEMNRNENDLLGWVLKNSNLSKEQILDLLLSLLFAGHETSSVAIALSIFLLESCPAAVQQLTEEHLEISRAK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="65165" PGL_stop="57660"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65103" e_stop="64775"/>
            <exon e_start="59547" e_stop="59124"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65103" e_stop="64775" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="64774" i_stop="59548" i_length="5227"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="59547" e_stop="59124" e_length="424"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65103" stop="64775"/>
              <exon start="59547" stop="59124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65085" stop="64775"/>
              <exon start="59547" stop="59285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65005" stop="64775"/>
              <exon start="59547" stop="59280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245177" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACA</gDNA_template>
            <first_frame> C  V  L  G  S  C  E  S  L  S  V  *  H  F  L  L  R  F  P  F  A  L  D  Q  C  N  S  L  F  G  G  I  V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  W :   A  D  V  A  V  A  L  F  C  A  L  L  F  G  V  L  I  L  S  S  Y  V  A  L  Y  L  R  H  Y  W  S  S  F  L  I  I  S  L  A  I  T  L  P  V  R  L  R  M  L  R  Q  A  H  A  R  K  K  V  R  Q  L  P  L  S  M  *  T  S  F  Y  F  W  K  H  Q  T  V  V  *  V  K  G  I  P  F  A  Q  K  C  S  P  I  V  V  I  Q  F  F  D  L  R  H  I  G  *  P  I  F  C  C  E  R  W  D  T  P  F  I  L  L  L  M  T  H  S  L  R  N  R  I  *  T  I  N  *  L  P  M  K  *  T </first_frame>
            <second_frame>  V  Y  W  G  H  A  N  P  S  Q  F  S  I  F  F  F  V  F  L  L  R  W  T  S  V  T  A  Y  S  E  G  S  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : G  L  M  L  Q  L  L  Y  S  A  P  C  Y  L  V  C  L  Y  Y  H  H  M  W  P  F  I  Y  D  I  T  G  V  P  F  S  L  *  A  L  P  L  P  F  Q  C  V  *  E  C  Y  D  R  L  M  Q  E  R  K  *  D  S  Y  L  C  L  C  E  L  P  S  T  S  G  S  T  K  Q  W  F  K  *  K  E  Y  L  L  H  K  S  A  L  Q  L  *  *  Y  S  S  L  I  F  V  T  *  A  D  Q  S  S  A  V  K  D  G  T  H  P  S  Y  Y  S  *  *  L  I  H  *  E  T  G  F  R  R  S  I  S  S  L  *  N  E   </second_frame>
            <third_frame>   C  T  G  V  M  R  I  P  L  S  L  A  F  S  S  S  F  S  F  C  V  G  P  V  *  Q  L  I  R  R  D  R  F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  G  *  C  C  S  C  F  I  L  R  L  V  I  W  C  A  Y  I  I  I  I  C  G  P  L  F  T  T  L  L  E  F  L  S  H  Y  K  P  C  H  Y  P  S  S  A  S  E  N  V  T  T  G  S  C  K  K  E  S  K  T  V  T  F  V  Y  V  N  F  L  L  L  L  E  A  P  N  S  G  L  S  E  R  N  T  F  C  T  K  V  L  S  N  C  S  N  T  V  L  *  S  S  S  H  R  L  T  N  L  L  L  *  K  M  G  H  T  L  H  I  T  L  D  D  S  F  I  K  K  Q  D  L  D  D  Q  L  A  P  Y  E  M  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64920" stop="64775"/>
                    <exon start="59547" stop="59349"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRRIRFSIVLVNMITRSKLVEQLRDYQIRSQHKCPPLTFFSPKLYLSNWADVAVALFCALLFGVLILSSYVALYLRHYWSSFLIISLAITLPVRLRMLRQAHARKKVRQLPLSM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59541" stop="59251"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCSCFILRLVIWCAYIIIICGPLFTTLLEFLSHYKPCHYPSSASENVTTGSCKKESKTVTFVYVNFLLLLEAPNSGLSERNTFCTKVLSNCSNTVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="65005" e_stop="64775"/>
            <exon e_start="61788" e_stop="61476"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65005" e_stop="64775" e_length="231"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.921">
            <gDNA_intron_boundary i_start="64774" i_stop="61789" i_length="2986"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61788" e_stop="61476" e_length="313"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65005" stop="64775"/>
              <exon start="61788" stop="61476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325277" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : AAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</gDNA_template>
            <first_frame> F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  K  L  H  P  R  C  C  L  V  V  N  E  V  R  R  E  P  *  G  L  K  F  K  S  *  R  R  *  K  D  L  G  V  S  S  H  L  P  K  P  L  R  Q  N  Y  L  V  P  M  L  V  G  D  N  R  C  P  M  E  *  L  R  H  K  Q  A  G  S  D  T  T  I  I  L  K  R  S  M  L  E  I  A  F  F  V  L  H  V  N  N  L  E  N  A  T  D  A  P  I  S  P  V  H  M  </first_frame>
            <second_frame>  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  * :   N  C  T  Q  G  V  A  *  W  S  M  K  *  E  E  N  H  E  V  S  S  S  N  P  S  G  D  K  K  T  W  G  F  L  P  I  C  L  S  L  *  G  K  I  I  W  Y  L  C  W  W  E  I  T  G  A  Q  W  N  N  *  G  T  S  K  Q  A  R  T  P  R  L  F  *  K  E  V  C  W  K  L  L  F  L  F  C  M  *  I  I  *  R  T  P  Q  M  H  Q  Y  L  Q  Y  T  C </second_frame>
            <third_frame>   L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : E  I  A  P  K  V  L  P  S  G  Q  *  S  E  K  R  T  M  R  S  Q  V  Q  I  L  A  E  I  K  R  L  G  G  F  F  P  F  A  *  A  F  E  A  K  L  S  G  T  Y  A  G  G  R  *  Q  V  P  N  G  I  I  K  A  Q  A  S  R  L  G  H  H  D  Y  F  K  K  K  Y  A  G  N  C  F  F  C  F  A  C  E  *  F  R  E  R  H  R  C  T  N  I  S  S  T  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="65037" e_stop="64597"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="65037" e_stop="64597" e_length="441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65037" stop="64597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607946" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGAT</gDNA_template>
            <first_frame> D  Q  C  N  S  L  F  G  G  I  V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  W  Y  V  S  I  F  L  S  V  N  V  F  I  P  A  H  S  N  I  K  F  N  K  F  S  R  E  K  F  L  F  R  L  L  C  F  F  F  F  I  *  F  N  L  F  V  Y  T  *  A  I  C  T  K  K  N  *  F  C  D </first_frame>
            <second_frame>  T  S  V  T  A  Y  S  E  G  S  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T  G  T  S  P  Y  F  S  L  *  M  Y  L  S  L  H  I  V  I  S  S  L  T  N  L  A  G  R  S  F  C  L  D  F  Y  A  F  F  F  L  F  S  S  I  Y  L  C  I  P  E  L  F  V  Q  K  K  T  D  F  V   </second_frame>
            <third_frame>   P  V  *  Q  L  I  R  R  D  R  F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  V  R  L  H  I  S  L  C  K  C  I  Y  P  C  T  *  *  Y  Q  V  *  Q  I  *  Q  G  E  V  S  V  *  T  F  M  L  F  F  F  Y  L  V  Q  F  I  C  V  Y  L  S  Y  L  Y  K  K  K  L  I  L  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64920" stop="64654"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRRIRFSIVLVNMITRSKLVEQLRDYQIRSQHKCPPLTFFSPKLYLSNWYVSIFLSVNVFIPAHSNIKFNKFSREKFLFRLLCFFFFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="65165" e_stop="64775"/>
            <exon e_start="58102" e_stop="57923"/>
            <exon e_start="57683" e_stop="57660"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.300" e_score="0.995"/>
          <exon-intron don_prob="0.000" acc_prob="0.657" e_score="0.978"/>
          <exon-only e_score="0.542"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="65165" e_stop="64775" e_length="391"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.300">
            <gDNA_intron_boundary i_start="64774" i_stop="58103" i_length="6672"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="58102" e_stop="57923" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.657">
            <gDNA_intron_boundary i_start="57922" i_stop="57684" i_length="239"/>
          </intron>
          <exon e_serial="3" e_score="0.542">
            <gDNA_exon_boundary e_start="57683" e_stop="57660" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65165" stop="64775"/>
              <exon start="58102" stop="57923"/>
              <exon start="57683" stop="57660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720672" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTTTCTCTTAATAAAATAGCATACTGTATTAAAAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : AAAAGATGGAAAACATGCTCAACTACACAACAATTCTGTCGGTTCGACGGAACCAAGTAATTTGAAGTCAGTTTCTACGTACGATATACAAAAAAATGTGTATAAATAAAACTGATATAGTTCAAATTTTGGATCAGTCATTTCATTGTTTAAATTATTGCGGTTTTGACTTATCAAACT : AGATATGAATAGATGAATTAAATA</gDNA_template>
            <first_frame> L  F  L  L  I  K  *  H  T  V  L  K  K  S  S  I  L  F  R  L  T  V  Y  W  G  H  A  N  P  S  Q  F  S  I  F  F  F  V  F  L  L  R  W  T  S  V  T  A  Y  S  E  G  S  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : E  K  M  E  N  M  L  N  Y  T  T  I  L  S  V  R  R  N  Q  V  I  *  S  Q  F  L  R  T  I  Y  K  K  M  C  I  N  K  T  D  I  V  Q  I  L  D  Q  S  F  H  C  L  N  Y  C  G  F  D  L  S  N   : *  I  *  I  D  E  L  N  </first_frame>
            <second_frame>  C  F  S  *  *  N  S  I  L  Y  *  K  N  L  L  S  Y  F  V  *  L  C  T  G  V  M  R  I  P  L  S  L  A  F  S  S  S  F  S  F  C  V  G  P  V  *  Q  L  I  R  R  D  R  F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  K  R  W  K  T  C  S  T  T  Q  Q  F  C  R  F  D  G  T  K  *  F  E  V  S  F  Y  V  R  Y  T  K  K  C  V  *  I  K  L  I  *  F  K  F  W  I  S  H  F  I  V  *  I  I  A  V  L  T  Y  Q  T  :  R  Y  E  *  M  N  *  I </second_frame>
            <third_frame>   V  S  L  N  K  I  A  Y  C  I  K  K  I  F  Y  L  I  S  S  N  C  V  L  G  S  C  E  S  L  S  V  *  H  F  L  L  R  F  P  F  A  L  D  Q  C  N  S  L  F  G  G  I  V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  * :   K  D  G  K  H  A  Q  L  H  N  N  S  V  G  S  T  E  P  S  N  L  K  S  V  S  T  Y  D  I  Q  K  N  V  Y  K  *  N  *  Y  S  S  N  F  G  S  V  I  S  L  F  K  L  L  R  F  *  L  I  K  L :   D  M  N  R  *  I  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="68653" PGL_stop="69383"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68653" e_stop="69109"/>
            <exon e_start="69369" e_stop="69383"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.118" acc_prob="0.765" e_score="0.991"/>
          <exon-only e_score="0.467"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="68653" e_stop="69109" e_length="457"/>
          </exon>
          <intron i_serial="1" don_prob="0.118" acc_prob="0.765">
            <gDNA_intron_boundary i_start="69110" i_stop="69368" i_length="259"/>
          </intron>
          <exon e_serial="2" e_score="0.467">
            <gDNA_exon_boundary e_start="69369" e_stop="69383" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68653" stop="69109"/>
              <exon start="69369" stop="69383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68697" stop="69109"/>
              <exon start="69369" stop="69383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226703" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATTTGCAGTACCACAAGTTTGATTACTCAACCATTTAAACAAGAAACCAAGGAAAAGATACTGCTCGACGAGTAAACTGGACATACAGACGTAGAAATGAGGGTTAATAATGCATGGATAGAGGCTCTTACAAGAAAATATCTCCAATCTTTCTCCTCTTATCTTTGTGATTTTTTGGTACATTTATCTGATTTTAGTACAACAATATTGAACAAACAAGATTTTGTCAAATGAGCTCAAGTTAGAAACTGAGCTCAACTCATACCTATACAGATTGGAACAAGGAGGCTGCCTCTGATATATTTTTTCCCCTCTCTTCTCAACAACTTGCATATATTTCTTTTTGGATGAGAACAAGTACAATATTATGTTATAGAGGAGCATGTAAATAATCTAAGATTGGTATGGGTCATTTGTAAGTTCATGAAACCAAGGAATTTTTCCTTGCCAGATCT : TACAACTTAAAATGC</gDNA_template>
            <first_frame> K  F  A  V  P  Q  V  *  L  L  N  H  L  N  K  K  P  R  K  R  Y  C  S  T  S  K  L  D  I  Q  T  *  K  *  G  L  I  M  H  G  *  R  L  L  Q  E  N  I  S  N  L  S  P  L  I  F  V  I  F  W  Y  I  Y  L  I  L  V  Q  Q  Y  *  T  N  K  I  L  S  N  E  L  K  L  E  T  E  L  N  S  Y  L  Y  R  L  E  Q  G  G  C  L  *  Y  I  F  S  P  L  F  S  T  T  C  I  Y  F  F  L  D  E  N  K  Y  N  I  M  L  *  R  S  M  *  I  I  *  D  W  Y  G  S  F  V  S  S  *  N  Q  G  I  F  P  C  Q  I   : L  Q  L  K  M  </first_frame>
            <second_frame>  N  L  Q  Y  H  K  F  D  Y  S  T  I  *  T  R  N  Q  G  K  D  T  A  R  R  V  N  W  T  Y  R  R  R  N  E  G  *  *  C  M  D  R  G  S  Y  K  K  I  S  P  I  F  L  L  L  S  L  *  F  F  G  T  F  I  *  F  *  Y  N  N  I  E  Q  T  R  F  C  Q  M  S  S  S  *  K  L  S  S  T  H  T  Y  T  D  W  N  K  E  A  A  S  D  I  F  F  P  L  S  S  Q  Q  L  A  Y  I  S  F  W  M  R  T  S  T  I  L  C  Y  R  G  A  C  K  *  S  K  I  G  M  G  H  L  *  V  H  E  T  K  E  F  F  L  A  R  S  :  Y  N  L  K  C </second_frame>
            <third_frame>   I  C  S  T  T  S  L  I  T  Q  P  F  K  Q  E  T  K  E  K  I  L  L  D  E  *  T  G  H  T  D  V  E  M  R  V  N  N  A  W  I  E  A  L  T  R  K  Y  L  Q  S  F  S  S  Y  L  C  D  F  L  V  H  L  S  D  F  S  T  T  I  L  N  K  Q  D  F  V  K  *  A  Q  V  R  N  *  A  Q  L  I  P  I  Q  I  G  T  R  R  L  P  L  I  Y  F  F  P  S  L  L  N  N  L  H  I  F  L  F  G  *  E  Q  V  Q  Y  Y  V  I  E  E  H  V  N  N  L  R  L  V  W  V  I  C  K  F  M  K  P  R  N  F  S  L  P  D  L :   T  T  *  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="79551" PGL_stop="78911"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79551" e_stop="79457"/>
            <exon e_start="79336" e_stop="79217"/>
            <exon e_start="79134" e_stop="78911"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.843" acc_prob="0.430" e_score="0.979"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.975"/>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="79551" e_stop="79457" e_length="95"/>
          </exon>
          <intron i_serial="1" don_prob="0.843" acc_prob="0.430">
            <gDNA_intron_boundary i_start="79456" i_stop="79337" i_length="120"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="79336" e_stop="79217" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="79216" i_stop="79135" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.906">
            <gDNA_exon_boundary e_start="79134" e_stop="78911" e_length="224"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79551" stop="79457"/>
              <exon start="79336" stop="79217"/>
              <exon start="79134" stop="78911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420266" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACG : CAACAATTGCTGCAGTAGTTGGTCAACACGTTATAAGAAGAGTAATTGCACTGCTTGGAAGAGCCTCTATAATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAG : GTGGTGTGGGGATAGCAAATATGATAGAGAAGCTGAAGAACAATGACTATATGGGATTTGACAATCTATGTTACCATTCCTAGATATGTAATTTGGATTCAATACAAAGGCTACTTGTGGAAGGATATGAATACTTAATTCCACATTGTAATAAGTAGTTACATTTTCAATTTGTATTGTGTCTATTTGTTTTCAAGAAGAAAACAAAATGATAACTTGGATCC</gDNA_template>
            <first_frame> G  S  K  C  N  I  N  L  F  N  D  F  L  I  L  Y  V  S  C  A  I  L  P  I  E  A  F  P  C  P  I  R :   N  N  C  C  S  S  W  S  T  R  Y  K  K  S  N  C  T  A  W  K  S  L  Y  N  H  I  H  T  G  H  D  N  I  Y  Q  C  N  Q  L  R :   W  C  G  D  S  K  Y  D  R  E  A  E  E  Q  *  L  Y  G  I  *  Q  S  M  L  P  F  L  D  M  *  F  G  F  N  T  K  A  T  C  G  R  I  *  I  L  N  S  T  L  *  *  V  V  T  F  S  I  C  I  V  S  I  C  F  Q  E  E  N  K  M  I  T  W  I  </first_frame>
            <second_frame>  V  A  S  A  T  S  T  F  S  M  T  F  S  S  S  M  S  V  V  Q  Y  Y  L  L  K  R  F  P  V  P  Y   : A  T  I  A  A  V  V  G  Q  H  V  I  R  R  V  I  A  L  L  G  R  A  S  I  I  I  F  I  L  A  M  T  I  F  T  S  A  I  S  L   : G  G  V  G  I  A  N  M  I  E  K  L  K  N  N  D  Y  M  G  F  D  N  L  C  Y  H  S  *  I  C  N  L  D  S  I  Q  R  L  L  V  E  G  Y  E  Y  L  I  P  H  C  N  K  *  L  H  F  Q  F  V  L  C  L  F  V  F  K  K  K  T  K  *  *  L  G  S </second_frame>
            <third_frame>   *  Q  V  Q  H  Q  P  F  Q  *  L  S  H  P  L  C  Q  L  C  N  I  T  Y  *  S  V  S  L  S  H  T  :  Q  Q  L  L  Q  *  L  V  N  T  L  *  E  E  *  L  H  C  L  E  E  P  L  *  S  Y  S  Y  W  P  *  Q  Y  L  P  V  Q  S  A  *  :  V  V  W  G  *  Q  I  *  *  R  S  *  R  T  M  T  I  W  D  L  T  I  Y  V  T  I  P  R  Y  V  I  W  I  Q  Y  K  G  Y  L  W  K  D  M  N  T  *  F  H  I  V  I  S  S  Y  I  F  N  L  Y  C  V  Y  L  F  S  R  R  K  Q  N  D  N  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79550" stop="79457"/>
                    <exon start="79336" stop="79217"/>
                    <exon start="79134" stop="79052"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VASATSTFSMTFSSSMSVVQYYLLKRFPVPYATIAAVVGQHVIRRVIALLGRASIIIFILAMTIFTSAISLGGVGIANMIEKLKNNDYMGFDNLCYHS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79551" stop="79457"/>
                    <exon start="79336" stop="79217"/>
                    <exon start="79134" stop="79089"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSKCNINLFNDFLILYVSCAILPIEAFPCPIRNNCCSSWSTRYKKSNCTAWKSLYNHIHTGHDNIYQCNQLRWCGDSKYDREAEEQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="92043" PGL_stop="84872"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92043" e_stop="91787"/>
            <exon e_start="91010" e_stop="90896"/>
            <exon e_start="90809" e_stop="90730"/>
            <exon e_start="90010" e_stop="89935"/>
            <exon e_start="89854" e_stop="89790"/>
            <exon e_start="89675" e_stop="89613"/>
            <exon e_start="88137" e_stop="88056"/>
            <exon e_start="87981" e_stop="87948"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.980"/>
          <exon-intron don_prob="0.768" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.606" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.962" e_score="0.984"/>
          <exon-intron don_prob="0.719" acc_prob="0.943" e_score="0.988"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="92043" e_stop="91787" e_length="257"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="91786" i_stop="91011" i_length="776"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91010" e_stop="90896" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="0.768" acc_prob="0.985">
            <gDNA_intron_boundary i_start="90895" i_stop="90810" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90809" e_stop="90730" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="90729" i_stop="90011" i_length="719"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90010" e_stop="89935" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.606" acc_prob="0.998">
            <gDNA_intron_boundary i_start="89934" i_stop="89855" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="89854" e_stop="89790" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.950" acc_prob="0.996">
            <gDNA_intron_boundary i_start="89789" i_stop="89676" i_length="114"/>
          </intron>
          <exon e_serial="6" e_score="0.984">
            <gDNA_exon_boundary e_start="89675" e_stop="89613" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.866" acc_prob="0.962">
            <gDNA_intron_boundary i_start="89612" i_stop="88138" i_length="1475"/>
          </intron>
          <exon e_serial="7" e_score="0.988">
            <gDNA_exon_boundary e_start="88137" e_stop="88056" e_length="82"/>
          </exon>
          <intron i_serial="7" don_prob="0.719" acc_prob="0.943">
            <gDNA_intron_boundary i_start="88055" i_stop="87982" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="87981" e_stop="87948" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92043" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92032" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89790"/>
              <exon start="89675" stop="89613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92032" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441533" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92031" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417290" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92031" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92029" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89790"/>
              <exon start="89675" stop="89613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91982" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89790"/>
              <exon start="89675" stop="89613"/>
              <exon start="88137" stop="88056"/>
              <exon start="87981" stop="87948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91982" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89790"/>
              <exon start="89675" stop="89613"/>
              <exon start="88137" stop="88056"/>
              <exon start="87981" stop="87953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91976" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89790"/>
              <exon start="89675" stop="89613"/>
              <exon start="88137" stop="88066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E599715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91951" stop="91787"/>
              <exon start="91010" stop="90896"/>
              <exon start="90809" stop="90730"/>
              <exon start="90010" stop="89935"/>
              <exon start="89854" stop="89790"/>
              <exon start="89675" stop="89613"/>
              <exon start="88137" stop="88056"/>
              <exon start="87981" stop="87956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698225" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTTTATATAAGCCGCTTCTCTGCGCCGGATAAACCCTTGTTTCTATTTTGTTCTTCGTGCCGCCTCAGCTATCTTCTCCATCTCTCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG : ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG : GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG : ACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT : ATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTT : AATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG : GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAG : CTGCGTATAAACAAGCTGATGGAAAGAAGATTGA</gDNA_template>
            <first_frame> V  F  I  *  A  A  S  L  R  R  I  N  P  C  F  Y  F  V  L  R  A  A  S  A  I  F  S  I  S  P  I  V  R  L  T  *  L  H  F  L  W  R  R  F  A  S  S  K  N  P  S  R  L  Q  W  E  T  S  T  M  P  S  C  G  T  T  L  T  F  R  P  V  Q  R  P  R  I  A  L  M  S  C  N  S  S  * :   L  V  K  V  I  Q  L  G  *  L  L  I  F  *  S  C  L  S  P  D  H  L  W  S  T  N  H  P  L  R  R  E  N  A  L  H  I  L  :  G  W  H  N  L  L  V  T  S  L  N  L  V  I  Q  N  M  L  H  Q  S  L  R  L  K  P  R :   L  N  E  E  L  G  S  T  R  Y  G  W  R  R  V  L  K  R  L  L  R  S  L  K  N  :  M  I  L  A  A  T  Q  M  L  P  G  I  H  T  R  H  Y  L  L  Q  D  L :   I  M  R  Q  Q  K  A  E  S  N  A  N  L  R  L  M  V  Q  S  S  G :   F  A  W  L  W  T  R  Q  T  I  N  P  G  V  M  L  S  L  S  M  C  I  H  G  I  *  K  :  L  R  I  N  K  L  M  E  R  R  L  </first_frame>
            <second_frame>  S  L  Y  K  P  L  L  C  A  G  *  T  L  V  S  I  L  F  F  V  P  P  Q  L  S  S  P  S  L  Q  S  S  D  *  R  N  S  T  S  C  G  G  D  S  H  L  A  K  T  L  V  G  F  N  G  R  L  Q  R  C  L  H  A  E  Q  P  *  R  S  G  P  C  K  G  P  E  S  R  *  C  H  A  T  Q  A   : D  W  S  K  S  S  N  W  V  D  C  *  S  S  E  V  V  *  A  P  T  T  F  G  V  Q  T  T  P  *  E  E  K  M  P  F  I  Y  W :   D  G  T  I  C  *  *  L  R  S  T  W  *  S  R  I  C  S  T  N  P  *  G  *  N  P   : D  *  T  K  S  *  D  P  Q  D  T  A  G  G  G  C  *  K  G  C  *  G  A  *  K  I :   *  S  *  Q  R  P  K  C  Y  R  G  S  I  Q  D  T  I  C  C  K  T   : *  L  *  D  N  R  K  Q  S  Q  T  R  I  *  G  L  W  S  N  Q  A   : G  S  L  G  Y  G  Q  D  K  Q  *  T  Q  G  L  C  F  H  *  V  C  A  Y  T  G  Y  E  S :   C  V  *  T  S  *  W  K  E  D  * </second_frame>
            <third_frame>   L  Y  I  S  R  F  S  A  P  D  K  P  L  F  L  F  C  S  S  C  R  L  S  Y  L  L  H  L  S  N  R  P  I  N  V  T  P  L  L  V  A  A  I  R  I  *  Q  K  P  *  S  A  S  M  G  D  F  N  D  A  F  M  R  N  N  P  N  V  Q  A  R  A  K  A  Q  N  R  A  N  V  M  Q  L  K  L  :  I  G  Q  S  H  P  T  G  L  T  A  N  L  L  K  L  F  E  P  R  P  P  L  E  Y  K  P  P  P  E  K  R  K  C  P  S  Y  T   : G  M  A  Q  F  V  S  N  F  A  Q  P  G  D  P  E  Y  A  P  P  I  P  E  V  E  T  P  :  T  E  R  R  A  R  I  H  K  I  R  L  E  E  G  A  K  K  A  A  E  E  L  E  K   : Y  D  P  S  S  D  P  N  A  T  G  D  P  Y  K  T  L  F  V  A  R  L  :  N  Y  E  T  T  E  S  R  V  K  R  E  F  E  A  Y  G  P  I  K  R  :  V  R  L  V  M  D  K  T  N  N  K  P  R  G  Y  A  F  I  E  Y  V  H  T  R  D  M  K   : A  A  Y  K  Q  A  D  G  K  K  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91891" stop="91787"/>
                    <exon start="91010" stop="90896"/>
                    <exon start="90809" stop="90730"/>
                    <exon start="90010" stop="89935"/>
                    <exon start="89854" stop="89790"/>
                    <exon start="89675" stop="89613"/>
                    <exon start="88137" stop="88056"/>
                    <exon start="87981" stop="87950"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SASMGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPSYTGMAQFVSNFAQPGDPEYAPPIPEVETPTERRARIHKIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFEAYGPIKRVRLVMDKTNNKPRGYAFIEYVHTRDMKAAYKQADGKKI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88857" e_stop="88671"/>
            <exon e_start="87354" e_stop="87321"/>
            <exon e_start="87136" e_stop="86466"/>
            <exon e_start="86367" e_stop="86083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.963"/>
          <exon-intron don_prob="0.995" acc_prob="0.986" e_score="0.971"/>
          <exon-intron don_prob="0.994" acc_prob="0.911" e_score="0.959"/>
          <exon-only e_score="0.894"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="88857" e_stop="88671" e_length="187"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88670" i_stop="87355" i_length="1316"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="87354" e_stop="87321" e_length="34"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.986">
            <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="0.959">
            <gDNA_exon_boundary e_start="87136" e_stop="86466" e_length="671"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.911">
            <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.894">
            <gDNA_exon_boundary e_start="86367" e_stop="86083" e_length="285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88857" stop="88671"/>
              <exon start="87354" stop="87321"/>
              <exon start="87136" stop="86697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88857" stop="88671"/>
              <exon start="87354" stop="87321"/>
              <exon start="87136" stop="86915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87000" stop="86466"/>
              <exon start="86367" stop="86153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86815" stop="86466"/>
              <exon start="86367" stop="86166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428204" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86746" stop="86466"/>
              <exon start="86367" stop="86107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425151" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86707" stop="86466"/>
              <exon start="86367" stop="86130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86680" stop="86466"/>
              <exon start="86367" stop="86083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86679" stop="86466"/>
              <exon start="86367" stop="86086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587182" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAG : CTGAGGAGCCAAGAGCACGAGATGACAGGGATAG : GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTG : GAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTGACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTATGTTATGGTATTGTGGCACTTTATT</gDNA_template>
            <first_frame> I  S  F  K  Y  Y  S  F  W  Y  S  F  S  F  *  N  H  K  G  K  D  V  Q  L  L  G  I  F  L  V  R  V  K  L  N  Y  L  V  A  L  C  F  F  E  L  P  N  I  T  I  Q  F  P  S  P  S  Y  I  T  *  N  K   : A  E  E  P  R  A  R  D  D  R  D  R :   D  R  E  K  S  R  E  R  V  R  D  K  D  R  E  K  S  R  E  R  S  H  D  R  P  R  E  R  E  R  D  D  K  H  H  R  E  R  E  R  T  R  E  R  E  K  D  R  G  R  D  R  D  R  D  R  E  R  D  R  T  R  D  R  E  R  G  K  D  R  D  R  D  G  H  R  E  R  D  R  H  R  E  K  D  R  E  R  G  R  D  E  G  E  V  D  Q  G  R  G  R  S  R  D  R  E  Y  D  Y  E  H  V  D  S  K  H  E  R  D  R  H  G  D  K  E  R  N  Y  D  P  A  E  P  E  D  D  H  G  H  Y  D  Y  Y  D  H  H  Q  G  R  G  D  Y  E  N  P  D  A  Q  G  G  D  D  R  Y  K  D  A  S  R  G  H  D  R  Y  D  Q  M  E  E  D  N  Y  A  Y  D  H  G  A  S  E  T  K  E  R  D  R  D  Y  K  R  S  D  R  S  H  S  R  E  Y  D  Y  *  R  *  R  V  C  F  S  L  C  C  C   : G  R  H  G  L  L  I  P  Q  *  K  C  N  Y  L  L  D  Y  L  L  D  *  C  G  D  G  N  I  K  D  D  D  A  A  H  Q  P  M  F  *  I  L  Y  L  L  L  E  L  F  G  K  L  L  A  E  F  *  C  D  L  L  N  A  N  L  L  G  M  C  A  R  *  C  V  C  Y  V  V  L  Y  V  E  Q  I  I  R  L  C  Y  G  I  V  A  L  Y  </first_frame>
            <second_frame>  L  V  S  S  T  I  H  S  G  I  P  L  V  S  R  T  T  K  V  K  M  F  N  S  *  V  F  S  W  *  G  *  N  L  I  I  W  *  L  Y  V  F  L  S  C  Q  T  *  P  F  N  F  Q  V  R  A  T  L  H  E  T  K  :  L  R  S  Q  E  H  E  M  T  G  I   : G  I  G  R  S  P  V  K  G  C  E  I  R  T  E  R  N  L  V  S  V  L  M  T  G  Q  G  N  V  K  E  M  T  N  I  I  G  N  A  R  E  P  E  K  E  K  K  I  V  V  V  T  V  I  E  T  A  N  V  I  G  H  V  T  V  S  E  A  K  T  E  T  G  M  V  T  V  S  E  I  V  T  V  R  R  T  G  K  E  V  G  M  K  V  R  L  T  R  V  V  G  V  L  V  I  E  N  M  I  M  S  M  L  I  Q  N  T  S  E  T  D  T  V  T  K  R  G  I  M  I  L  Q  N  L  K  M  I  M  D  I  M  T  I  M  I  T  T  K  V  E  E  I  M  R  I  Q  M  H  K  V  G  M  I  A  I  K  M  P  V  V  V  M  I  V  M  I  K  W  K  R  I  I  M  L  M  T  T  G  H  L  R  Q  K  K  G  I  G  I  T  S  V  Q  I  G  H  I  L  V  N  M  T  T  D  D  E  E  Y  A  S  A  C  V  A  V  :  E  D  M  A  Y  *  Y  L  S  E  N  A  I  I  C  W  I  T  Y  L  T  S  A  G  M  E  T  L  K  M  M  M  R  R  I  S  P  C  F  E  F  C  I  F  F  W  N  C  L  V  N  Y  L  L  S  S  N  V  T  C  *  M  R  I  Y  W  G  C  V  R  G  N  V  F  V  M  W  Y  C  M  L  N  R  L  F  A  Y  V  M  V  L  W  H  F  I </second_frame>
            <third_frame>   *  F  Q  V  L  F  I  L  V  F  L  *  F  L  E  P  Q  R  *  R  C  S  T  P  R  Y  F  P  G  K  G  K  T  *  L  S  G  S  F  M  F  F  *  V  A  K  H  N  H  S  I  S  K  S  E  L  H  Y  M  K  Q  S :   *  G  A  K  S  T  R  *  Q  G  *  :  G  S  G  E  V  P  *  K  G  A  R  *  G  Q  R  E  I  S  *  A  F  S  *  Q  A  K  G  T  *  K  R  *  Q  T  S  *  G  T  R  E  N  Q  R  K  R  K  R  S  W  S  *  P  *  S  R  P  R  T  *  *  D  T  *  P  *  A  R  Q  R  Q  R  P  G  W  S  P  *  A  R  S  S  P  *  E  G  Q  G  K  R  *  G  *  R  *  G  *  P  G  S  W  A  F  S  *  *  R  I  *  L  *  A  C  *  F  K  T  R  A  R  P  T  R  *  Q  R  E  E  L  *  S  C  R  T  *  R  *  S  W  T  L  *  L  L  *  S  P  P  R  S  R  R  L  *  E  S  R  C  T  R  W  G  *  S  L  *  R  C  Q  S  W  S  *  S  L  *  S  N  G  R  G  *  L  C  L  *  P  R  G  I  *  D  K  R  K  G  S  G  L  Q  A  F  R  *  V  T  F  S  *  I  *  L  L  T  M  K  S  M  L  Q  P  V  L  L  W :   K  T  W  P  T  D  T  S  V  K  M  Q  L  S  V  G  L  P  T  *  L  V  R  G  W  K  H  *  R  *  *  C  G  A  S  A  H  V  L  N  F  V  S  S  F  G  I  V  W  *  I  T  C  *  V  L  M  *  L  V  K  C  E  F  I  G  D  V  C  A  V  M  C  L  L  C  G  I  V  C  *  T  D  Y  S  L  M  L  W  Y  C  G  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88712" stop="88671"/>
                    <exon start="87354" stop="87321"/>
                    <exon start="87136" stop="86466"/>
                    <exon start="86367" stop="86350"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFNFQVRATLHETKLRSQEHEMTGIGIGRSPVKGCEIRTERNLVSVLMTGQGNVKEMTNIIGNAREPEKEKKIVVVTVIETANVIGHVTVSEAKTETGMVTVSEIVTVRRTGKEVGMKVRLTRVVGVLVIENMIMSMLIQNTSETDTVTKRGIMILQNLKMIMDIMTIMITTKVEEIMRIQMHKVGMIAIKMPVVVMIVMIKWKRIIMLMTTGHLRQKKGIGITSVQIGHILVNMTTDDEEYASACVAVEDMAY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88677" stop="88671"/>
                    <exon start="87354" stop="87321"/>
                    <exon start="87136" stop="86500"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKAEEPRARDDRDRDREKSRERVRDKDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDRTRDRERGKDRDRDGHRERDRHREKDRERGRDEGEVDQGRGRSRDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQGRGDYENPDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKRSDRSHSREYDY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="87874" e_stop="87834"/>
            <exon e_start="87389" e_stop="87321"/>
            <exon e_start="87136" e_stop="86466"/>
            <exon e_start="86367" e_stop="86083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.937" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.986" e_score="0.986"/>
          <exon-intron don_prob="0.994" acc_prob="0.911" e_score="0.959"/>
          <exon-only e_score="0.894"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87874" e_stop="87834" e_length="41"/>
          </exon>
          <intron i_serial="1" don_prob="0.937" acc_prob="0.993">
            <gDNA_intron_boundary i_start="87833" i_stop="87390" i_length="444"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="87389" e_stop="87321" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.986">
            <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="0.959">
            <gDNA_exon_boundary e_start="87136" e_stop="86466" e_length="671"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.911">
            <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.894">
            <gDNA_exon_boundary e_start="86367" e_stop="86083" e_length="285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87874" stop="87834"/>
              <exon start="87389" stop="87321"/>
              <exon start="87136" stop="86854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87000" stop="86466"/>
              <exon start="86367" stop="86153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86815" stop="86466"/>
              <exon start="86367" stop="86166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428204" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86746" stop="86466"/>
              <exon start="86367" stop="86107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425151" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86707" stop="86466"/>
              <exon start="86367" stop="86130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86680" stop="86466"/>
              <exon start="86367" stop="86083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86679" stop="86466"/>
              <exon start="86367" stop="86086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587182" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAG : AGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG : GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTG : GAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTGACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTATGTTATGGTATTGTGGCACTTTATT</gDNA_template>
            <first_frame> G  L  G  T  T  R  V  G  N  E  D  A  T  R :   E  V  V  Q  P  G  R  A  A  S  R  S  E  E  P  R  A  R  D  D  R  D  R :   D  R  E  K  S  R  E  R  V  R  D  K  D  R  E  K  S  R  E  R  S  H  D  R  P  R  E  R  E  R  D  D  K  H  H  R  E  R  E  R  T  R  E  R  E  K  D  R  G  R  D  R  D  R  D  R  E  R  D  R  T  R  D  R  E  R  G  K  D  R  D  R  D  G  H  R  E  R  D  R  H  R  E  K  D  R  E  R  G  R  D  E  G  E  V  D  Q  G  R  G  R  S  R  D  R  E  Y  D  Y  E  H  V  D  S  K  H  E  R  D  R  H  G  D  K  E  R  N  Y  D  P  A  E  P  E  D  D  H  G  H  Y  D  Y  Y  D  H  H  Q  G  R  G  D  Y  E  N  P  D  A  Q  G  G  D  D  R  Y  K  D  A  S  R  G  H  D  R  Y  D  Q  M  E  E  D  N  Y  A  Y  D  H  G  A  S  E  T  K  E  R  D  R  D  Y  K  R  S  D  R  S  H  S  R  E  Y  D  Y  *  R  *  R  V  C  F  S  L  C  C  C   : G  R  H  G  L  L  I  P  Q  *  K  C  N  Y  L  L  D  Y  L  L  D  *  C  G  D  G  N  I  K  D  D  D  A  A  H  Q  P  M  F  *  I  L  Y  L  L  L  E  L  F  G  K  L  L  A  E  F  *  C  D  L  L  N  A  N  L  L  G  M  C  A  R  *  C  V  C  Y  V  V  L  Y  V  E  Q  I  I  R  L  C  Y  G  I  V  A  L  Y  </first_frame>
            <second_frame>  D  L  E  Q  Q  E  L  E  M  K  M  L  L   : E  R  W  F  S  L  E  G  Q  H  L  A  L  R  S  Q  E  H  E  M  T  G  I   : G  I  G  R  S  P  V  K  G  C  E  I  R  T  E  R  N  L  V  S  V  L  M  T  G  Q  G  N  V  K  E  M  T  N  I  I  G  N  A  R  E  P  E  K  E  K  K  I  V  V  V  T  V  I  E  T  A  N  V  I  G  H  V  T  V  S  E  A  K  T  E  T  G  M  V  T  V  S  E  I  V  T  V  R  R  T  G  K  E  V  G  M  K  V  R  L  T  R  V  V  G  V  L  V  I  E  N  M  I  M  S  M  L  I  Q  N  T  S  E  T  D  T  V  T  K  R  G  I  M  I  L  Q  N  L  K  M  I  M  D  I  M  T  I  M  I  T  T  K  V  E  E  I  M  R  I  Q  M  H  K  V  G  M  I  A  I  K  M  P  V  V  V  M  I  V  M  I  K  W  K  R  I  I  M  L  M  T  T  G  H  L  R  Q  K  K  G  I  G  I  T  S  V  Q  I  G  H  I  L  V  N  M  T  T  D  D  E  E  Y  A  S  A  C  V  A  V  :  E  D  M  A  Y  *  Y  L  S  E  N  A  I  I  C  W  I  T  Y  L  T  S  A  G  M  E  T  L  K  M  M  M  R  R  I  S  P  C  F  E  F  C  I  F  F  W  N  C  L  V  N  Y  L  L  S  S  N  V  T  C  *  M  R  I  Y  W  G  C  V  R  G  N  V  F  V  M  W  Y  C  M  L  N  R  L  F  A  Y  V  M  V  L  W  H  F  I </second_frame>
            <third_frame>   T  W  N  N  K  S  W  K  *  R  C  Y  *  :  R  G  G  S  A  W  K  G  S  I  S  L  *  G  A  K  S  T  R  *  Q  G  *  :  G  S  G  E  V  P  *  K  G  A  R  *  G  Q  R  E  I  S  *  A  F  S  *  Q  A  K  G  T  *  K  R  *  Q  T  S  *  G  T  R  E  N  Q  R  K  R  K  R  S  W  S  *  P  *  S  R  P  R  T  *  *  D  T  *  P  *  A  R  Q  R  Q  R  P  G  W  S  P  *  A  R  S  S  P  *  E  G  Q  G  K  R  *  G  *  R  *  G  *  P  G  S  W  A  F  S  *  *  R  I  *  L  *  A  C  *  F  K  T  R  A  R  P  T  R  *  Q  R  E  E  L  *  S  C  R  T  *  R  *  S  W  T  L  *  L  L  *  S  P  P  R  S  R  R  L  *  E  S  R  C  T  R  W  G  *  S  L  *  R  C  Q  S  W  S  *  S  L  *  S  N  G  R  G  *  L  C  L  *  P  R  G  I  *  D  K  R  K  G  S  G  L  Q  A  F  R  *  V  T  F  S  *  I  *  L  L  T  M  K  S  M  L  Q  P  V  L  L  W :   K  T  W  P  T  D  T  S  V  K  M  Q  L  S  V  G  L  P  T  *  L  V  R  G  W  K  H  *  R  *  *  C  G  A  S  A  H  V  L  N  F  V  S  S  F  G  I  V  W  *  I  T  C  *  V  L  M  *  L  V  K  C  E  F  I  G  D  V  C  A  V  M  C  L  L  C  G  I  V  C  *  T  D  Y  S  L  M  L  W  Y  C  G  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87873" stop="87834"/>
                    <exon start="87389" stop="87321"/>
                    <exon start="87136" stop="86466"/>
                    <exon start="86367" stop="86350"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLEQQELEMKMLLERWFSLEGQHLALRSQEHEMTGIGIGRSPVKGCEIRTERNLVSVLMTGQGNVKEMTNIIGNAREPEKEKKIVVVTVIETANVIGHVTVSEAKTETGMVTVSEIVTVRRTGKEVGMKVRLTRVVGVLVIENMIMSMLIQNTSETDTVTKRGIMILQNLKMIMDIMTIMITTKVEEIMRIQMHKVGMIAIKMPVVVMIVMIKWKRIIMLMTTGHLRQKKGIGITSVQIGHILVNMTTDDEEYASACVAVEDMAY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87874" stop="87834"/>
                    <exon start="87389" stop="87321"/>
                    <exon start="87136" stop="86500"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLGTTRVGNEDATREVVQPGRAASRSEEPRARDDRDRDREKSRERVRDKDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDRTRDRERGKDRDRDGHRERDRHREKDRERGRDEGEVDQGRGRSRDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQGRGDYENPDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKRSDRSHSREYDY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="88857" e_stop="88671"/>
            <exon e_start="87354" e_stop="87321"/>
            <exon e_start="87136" e_stop="86466"/>
            <exon e_start="86367" e_stop="86113"/>
            <exon e_start="84916" e_stop="84872"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.963"/>
          <exon-intron don_prob="0.995" acc_prob="0.986" e_score="0.971"/>
          <exon-intron don_prob="0.994" acc_prob="0.911" e_score="0.959"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="0.895"/>
          <exon-only e_score="0.467"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="88857" e_stop="88671" e_length="187"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88670" i_stop="87355" i_length="1316"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="87354" e_stop="87321" e_length="34"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.986">
            <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="0.959">
            <gDNA_exon_boundary e_start="87136" e_stop="86466" e_length="671"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.911">
            <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.895">
            <gDNA_exon_boundary e_start="86367" e_stop="86113" e_length="255"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="86112" i_stop="84917" i_length="1196"/>
          </intron>
          <exon e_serial="5" e_score="0.467">
            <gDNA_exon_boundary e_start="84916" e_stop="84872" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88857" stop="88671"/>
              <exon start="87354" stop="87321"/>
              <exon start="87136" stop="86697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88857" stop="88671"/>
              <exon start="87354" stop="87321"/>
              <exon start="87136" stop="86915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87000" stop="86466"/>
              <exon start="86367" stop="86153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86815" stop="86466"/>
              <exon start="86367" stop="86166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428204" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86707" stop="86466"/>
              <exon start="86367" stop="86130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86681" stop="86466"/>
              <exon start="86367" stop="86113"/>
              <exon start="84916" stop="84872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417291" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAG : CTGAGGAGCCAAGAGCACGAGATGACAGGGATAG : GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTG : GAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTGACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTC : GGGTGTACAAAATCGAATCGAAAATCGAATCAAACCGCAAACCGA</gDNA_template>
            <first_frame> I  S  F  K  Y  Y  S  F  W  Y  S  F  S  F  *  N  H  K  G  K  D  V  Q  L  L  G  I  F  L  V  R  V  K  L  N  Y  L  V  A  L  C  F  F  E  L  P  N  I  T  I  Q  F  P  S  P  S  Y  I  T  *  N  K   : A  E  E  P  R  A  R  D  D  R  D  R :   D  R  E  K  S  R  E  R  V  R  D  K  D  R  E  K  S  R  E  R  S  H  D  R  P  R  E  R  E  R  D  D  K  H  H  R  E  R  E  R  T  R  E  R  E  K  D  R  G  R  D  R  D  R  D  R  E  R  D  R  T  R  D  R  E  R  G  K  D  R  D  R  D  G  H  R  E  R  D  R  H  R  E  K  D  R  E  R  G  R  D  E  G  E  V  D  Q  G  R  G  R  S  R  D  R  E  Y  D  Y  E  H  V  D  S  K  H  E  R  D  R  H  G  D  K  E  R  N  Y  D  P  A  E  P  E  D  D  H  G  H  Y  D  Y  Y  D  H  H  Q  G  R  G  D  Y  E  N  P  D  A  Q  G  G  D  D  R  Y  K  D  A  S  R  G  H  D  R  Y  D  Q  M  E  E  D  N  Y  A  Y  D  H  G  A  S  E  T  K  E  R  D  R  D  Y  K  R  S  D  R  S  H  S  R  E  Y  D  Y  *  R  *  R  V  C  F  S  L  C  C  C   : G  R  H  G  L  L  I  P  Q  *  K  C  N  Y  L  L  D  Y  L  L  D  *  C  G  D  G  N  I  K  D  D  D  A  A  H  Q  P  M  F  *  I  L  Y  L  L  L  E  L  F  G  K  L  L  A  E  F  *  C  D  L  L  N  A  N  L  L  G  M  C  A  R  *  C  V  C  Y  V  V  L  Y  V  E  Q  I  I   : R  V  Y  K  I  E  S  K  I  E  S  N  R  K  P  </first_frame>
            <second_frame>  L  V  S  S  T  I  H  S  G  I  P  L  V  S  R  T  T  K  V  K  M  F  N  S  *  V  F  S  W  *  G  *  N  L  I  I  W  *  L  Y  V  F  L  S  C  Q  T  *  P  F  N  F  Q  V  R  A  T  L  H  E  T  K  :  L  R  S  Q  E  H  E  M  T  G  I   : G  I  G  R  S  P  V  K  G  C  E  I  R  T  E  R  N  L  V  S  V  L  M  T  G  Q  G  N  V  K  E  M  T  N  I  I  G  N  A  R  E  P  E  K  E  K  K  I  V  V  V  T  V  I  E  T  A  N  V  I  G  H  V  T  V  S  E  A  K  T  E  T  G  M  V  T  V  S  E  I  V  T  V  R  R  T  G  K  E  V  G  M  K  V  R  L  T  R  V  V  G  V  L  V  I  E  N  M  I  M  S  M  L  I  Q  N  T  S  E  T  D  T  V  T  K  R  G  I  M  I  L  Q  N  L  K  M  I  M  D  I  M  T  I  M  I  T  T  K  V  E  E  I  M  R  I  Q  M  H  K  V  G  M  I  A  I  K  M  P  V  V  V  M  I  V  M  I  K  W  K  R  I  I  M  L  M  T  T  G  H  L  R  Q  K  K  G  I  G  I  T  S  V  Q  I  G  H  I  L  V  N  M  T  T  D  D  E  E  Y  A  S  A  C  V  A  V  :  E  D  M  A  Y  *  Y  L  S  E  N  A  I  I  C  W  I  T  Y  L  T  S  A  G  M  E  T  L  K  M  M  M  R  R  I  S  P  C  F  E  F  C  I  F  F  W  N  C  L  V  N  Y  L  L  S  S  N  V  T  C  *  M  R  I  Y  W  G  C  V  R  G  N  V  F  V  M  W  Y  C  M  L  N  R  L  F  :  G  C  T  K  S  N  R  K  S  N  Q  T  A  N  R </second_frame>
            <third_frame>   *  F  Q  V  L  F  I  L  V  F  L  *  F  L  E  P  Q  R  *  R  C  S  T  P  R  Y  F  P  G  K  G  K  T  *  L  S  G  S  F  M  F  F  *  V  A  K  H  N  H  S  I  S  K  S  E  L  H  Y  M  K  Q  S :   *  G  A  K  S  T  R  *  Q  G  *  :  G  S  G  E  V  P  *  K  G  A  R  *  G  Q  R  E  I  S  *  A  F  S  *  Q  A  K  G  T  *  K  R  *  Q  T  S  *  G  T  R  E  N  Q  R  K  R  K  R  S  W  S  *  P  *  S  R  P  R  T  *  *  D  T  *  P  *  A  R  Q  R  Q  R  P  G  W  S  P  *  A  R  S  S  P  *  E  G  Q  G  K  R  *  G  *  R  *  G  *  P  G  S  W  A  F  S  *  *  R  I  *  L  *  A  C  *  F  K  T  R  A  R  P  T  R  *  Q  R  E  E  L  *  S  C  R  T  *  R  *  S  W  T  L  *  L  L  *  S  P  P  R  S  R  R  L  *  E  S  R  C  T  R  W  G  *  S  L  *  R  C  Q  S  W  S  *  S  L  *  S  N  G  R  G  *  L  C  L  *  P  R  G  I  *  D  K  R  K  G  S  G  L  Q  A  F  R  *  V  T  F  S  *  I  *  L  L  T  M  K  S  M  L  Q  P  V  L  L  W :   K  T  W  P  T  D  T  S  V  K  M  Q  L  S  V  G  L  P  T  *  L  V  R  G  W  K  H  *  R  *  *  C  G  A  S  A  H  V  L  N  F  V  S  S  F  G  I  V  W  *  I  T  C  *  V  L  M  *  L  V  K  C  E  F  I  G  D  V  C  A  V  M  C  L  L  C  G  I  V  C  *  T  D  Y  S :   G  V  Q  N  R  I  E  N  R  I  K  P  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88712" stop="88671"/>
                    <exon start="87354" stop="87321"/>
                    <exon start="87136" stop="86466"/>
                    <exon start="86367" stop="86350"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFNFQVRATLHETKLRSQEHEMTGIGIGRSPVKGCEIRTERNLVSVLMTGQGNVKEMTNIIGNAREPEKEKKIVVVTVIETANVIGHVTVSEAKTETGMVTVSEIVTVRRTGKEVGMKVRLTRVVGVLVIENMIMSMLIQNTSETDTVTKRGIMILQNLKMIMDIMTIMITTKVEEIMRIQMHKVGMIAIKMPVVVMIVMIKWKRIIMLMTTGHLRQKKGIGITSVQIGHILVNMTTDDEEYASACVAVEDMAY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88677" stop="88671"/>
                    <exon start="87354" stop="87321"/>
                    <exon start="87136" stop="86500"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKAEEPRARDDRDRDREKSRERVRDKDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDRTRDRERGKDRDRDGHRERDRHREKDRERGRDEGEVDQGRGRSRDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQGRGDYENPDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKRSDRSHSREYDY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="87864" e_stop="87834"/>
            <exon e_start="87389" e_stop="87321"/>
            <exon e_start="87136" e_stop="86964"/>
            <exon e_start="86828" e_stop="86466"/>
            <exon e_start="86367" e_stop="86083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.937" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.911" e_score="0.957"/>
          <exon-only e_score="0.894"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87864" e_stop="87834" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.937" acc_prob="0.993">
            <gDNA_intron_boundary i_start="87833" i_stop="87390" i_length="444"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87389" e_stop="87321" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.986">
            <gDNA_intron_boundary i_start="87320" i_stop="87137" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="87136" e_stop="86964" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86963" i_stop="86829" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="0.957">
            <gDNA_exon_boundary e_start="86828" e_stop="86466" e_length="363"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.911">
            <gDNA_intron_boundary i_start="86465" i_stop="86368" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="0.894">
            <gDNA_exon_boundary e_start="86367" e_stop="86083" e_length="285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87864" stop="87834"/>
              <exon start="87389" stop="87321"/>
              <exon start="87136" stop="86964"/>
              <exon start="86828" stop="86536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86815" stop="86466"/>
              <exon start="86367" stop="86166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428204" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86746" stop="86466"/>
              <exon start="86367" stop="86107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425151" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86707" stop="86466"/>
              <exon start="86367" stop="86130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86680" stop="86466"/>
              <exon start="86367" stop="86083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86679" stop="86466"/>
              <exon start="86367" stop="86086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587182" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACAAGAGTTGGAAATGAAGATGCTACTAG : AGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG : GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAAC : GTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGTTCAGATAGGTCACATTCTCGTGAATATGACTACTGACGATGAAGAGTATGCTTCAGCCTGTGTTGCTGTG : GAAGACATGGCCTACTGATACCTCAGTGAAAATGCAATTATCTGTTGGATTACCTACTTGACTAGTGCGGGGATGGAAACATTAAAGATGATGATGCGGCGCATCAGCCCATGTTTTGAATTTTGTATCTTCTTTTGGAATTGTTTGGTAAATTACTTGCTGAGTTCTAATGTGACTTGTTAAATGCGAATTTATTGGGGATGTGTGCGCGGTAATGTGTTTGTTATGTGGTATTGTATGTTGAACAGATTATTCGCTTATGTTATGGTATTGTGGCACTTTATT</gDNA_template>
            <first_frame> Q  Q  E  L  E  M  K  M  L  L   : E  R  W  F  S  L  E  G  Q  H  L  A  L  R  S  Q  E  H  E  M  T  G  I   : G  I  G  R  S  P  V  K  G  C  E  I  R  T  E  R  N  L  V  S  V  L  M  T  G  Q  G  N  V  K  E  M  T  N  I  I  G  N  A  R  E  P  E  K  E  K  K  I  V  V  V  T  V  I  E  T  A  N  :  V  I  E  N  M  I  M  S  M  L  I  Q  N  T  S  E  T  D  T  V  T  K  R  G  I  M  I  L  Q  N  L  K  M  I  M  D  I  M  T  I  M  I  T  T  K  V  E  E  I  M  R  I  Q  M  H  K  V  G  M  I  A  I  K  M  P  V  V  V  M  I  V  M  I  K  W  K  R  I  I  M  L  M  T  T  G  H  L  R  Q  K  K  G  I  G  I  T  S  V  Q  I  G  H  I  L  V  N  M  T  T  D  D  E  E  Y  A  S  A  C  V  A  V  :  E  D  M  A  Y  *  Y  L  S  E  N  A  I  I  C  W  I  T  Y  L  T  S  A  G  M  E  T  L  K  M  M  M  R  R  I  S  P  C  F  E  F  C  I  F  F  W  N  C  L  V  N  Y  L  L  S  S  N  V  T  C  *  M  R  I  Y  W  G  C  V  R  G  N  V  F  V  M  W  Y  C  M  L  N  R  L  F  A  Y  V  M  V  L  W  H  F  I </first_frame>
            <second_frame>  N  K  S  W  K  *  R  C  Y  *  :  R  G  G  S  A  W  K  G  S  I  S  L  *  G  A  K  S  T  R  *  Q  G  *  :  G  S  G  E  V  P  *  K  G  A  R  *  G  Q  R  E  I  S  *  A  F  S  *  Q  A  K  G  T  *  K  R  *  Q  T  S  *  G  T  R  E  N  Q  R  K  R  K  R  S  W  S  *  P  *  S  R  P  R  T :   *  *  R  I  *  L  *  A  C  *  F  K  T  R  A  R  P  T  R  *  Q  R  E  E  L  *  S  C  R  T  *  R  *  S  W  T  L  *  L  L  *  S  P  P  R  S  R  R  L  *  E  S  R  C  T  R  W  G  *  S  L  *  R  C  Q  S  W  S  *  S  L  *  S  N  G  R  G  *  L  C  L  *  P  R  G  I  *  D  K  R  K  G  S  G  L  Q  A  F  R  *  V  T  F  S  *  I  *  L  L  T  M  K  S  M  L  Q  P  V  L  L  W :   K  T  W  P  T  D  T  S  V  K  M  Q  L  S  V  G  L  P  T  *  L  V  R  G  W  K  H  *  R  *  *  C  G  A  S  A  H  V  L  N  F  V  S  S  F  G  I  V  W  *  I  T  C  *  V  L  M  *  L  V  K  C  E  F  I  G  D  V  C  A  V  M  C  L  L  C  G  I  V  C  *  T  D  Y  S  L  M  L  W  Y  C  G  T  L   </second_frame>
            <third_frame>   T  R  V  G  N  E  D  A  T  R :   E  V  V  Q  P  G  R  A  A  S  R  S  E  E  P  R  A  R  D  D  R  D  R :   D  R  E  K  S  R  E  R  V  R  D  K  D  R  E  K  S  R  E  R  S  H  D  R  P  R  E  R  E  R  D  D  K  H  H  R  E  R  E  R  T  R  E  R  E  K  D  R  G  R  D  R  D  R  D  R  E   : R  D  R  E  Y  D  Y  E  H  V  D  S  K  H  E  R  D  R  H  G  D  K  E  R  N  Y  D  P  A  E  P  E  D  D  H  G  H  Y  D  Y  Y  D  H  H  Q  G  R  G  D  Y  E  N  P  D  A  Q  G  G  D  D  R  Y  K  D  A  S  R  G  H  D  R  Y  D  Q  M  E  E  D  N  Y  A  Y  D  H  G  A  S  E  T  K  E  R  D  R  D  Y  K  R  S  D  R  S  H  S  R  E  Y  D  Y  *  R  *  R  V  C  F  S  L  C  C  C   : G  R  H  G  L  L  I  P  Q  *  K  C  N  Y  L  L  D  Y  L  L  D  *  C  G  D  G  N  I  K  D  D  D  A  A  H  Q  P  M  F  *  I  L  Y  L  L  L  E  L  F  G  K  L  L  A  E  F  *  C  D  L  L  N  A  N  L  L  G  M  C  A  R  *  C  V  C  Y  V  V  L  Y  V  E  Q  I  I  R  L  C  Y  G  I  V  A  L  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87864" stop="87834"/>
                    <exon start="87389" stop="87321"/>
                    <exon start="87136" stop="86964"/>
                    <exon start="86828" stop="86466"/>
                    <exon start="86367" stop="86350"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QQELEMKMLLERWFSLEGQHLALRSQEHEMTGIGIGRSPVKGCEIRTERNLVSVLMTGQGNVKEMTNIIGNAREPEKEKKIVVVTVIETANVIENMIMSMLIQNTSETDTVTKRGIMILQNLKMIMDIMTIMITTKVEEIMRIQMHKVGMIAIKMPVVVMIVMIKWKRIIMLMTTGHLRQKKGIGITSVQIGHILVNMTTDDEEYASACVAVEDMAY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87862" stop="87834"/>
                    <exon start="87389" stop="87321"/>
                    <exon start="87136" stop="86964"/>
                    <exon start="86828" stop="86500"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRVGNEDATREVVQPGRAASRSEEPRARDDRDRDREKSRERVRDKDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQGRGDYENPDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKRSDRSHSREYDY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="96592" PGL_stop="96005"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96592" e_stop="96581"/>
            <exon e_start="96474" e_stop="96005"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="96592" e_stop="96581" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="96580" i_stop="96475" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="96474" e_stop="96005" e_length="470"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96592" stop="96581"/>
              <exon start="96474" stop="96005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361855" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACATCTTTCAG : GAGCATTGAAGATTTGTTGAGACGAGCAGCTAACGGGAGAGGTTGAATTTCTGGGCTGCCGGAAATTTCACCGTTGTTGAAATATGCAATCACCTCCTAGTACTGCTTCGTCCGACAAAGATGAGACTACTTCCTCTTCTCCTTCTAATTCCTCCCCGTCTCCCCCACCACCAGCTCCGCCTACCTCCCCACCCCCAGAATCTCCTCCACCTGTAAATTCTCCGCCACCGTCAAAGGAATCTTCTCCTCCGTCATCACCACCACCCTCAGCTTCTGAATCACCACCACCTCCGTCAGATTCCACTACCACGTCACTCAATGCTCCTGAGGCGTCTCCTCCTACCTCATCCAAATTTAATCCTCCACCACCAGTTTCCTCAGGATCACCTTCATTATCTGCTGGAAAATTATCTCCTCCTCCACCTTCAGAAAAATCAGCACCTTTTGAAAAACCAGACGGTGCACAACAT</gDNA_template>
            <first_frame> Y  I  F  Q  :  E  H  *  R  F  V  E  T  S  S  *  R  E  R  L  N  F  W  A  A  G  N  F  T  V  V  E  I  C  N  H  L  L  V  L  L  R  P  T  K  M  R  L  L  P  L  L  L  L  I  P  P  R  L  P  H  H  Q  L  R  L  P  P  H  P  Q  N  L  L  H  L  *  I  L  R  H  R  Q  R  N  L  L  L  R  H  H  H  H  P  Q  L  L  N  H  H  H  L  R  Q  I  P  L  P  R  H  S  M  L  L  R  R  L  L  L  P  H  P  N  L  I  L  H  H  Q  F  P  Q  D  H  L  H  Y  L  L  E  N  Y  L  L  L  H  L  Q  K  N  Q  H  L  L  K  N  Q  T  V  H  N   </first_frame>
            <second_frame>  T  S  F  R :   S  I  E  D  L  L  R  R  A  A  N  G  R  G  *  I  S  G  L  P  E  I  S  P  L  L  K  Y  A  I  T  S  *  Y  C  F  V  R  Q  R  *  D  Y  F  L  F  S  F  *  F  L  P  V  S  P  T  T  S  S  A  Y  L  P  T  P  R  I  S  S  T  C  K  F  S  A  T  V  K  G  I  F  S  S  V  I  T  T  T  L  S  F  *  I  T  T  T  S  V  R  F  H  Y  H  V  T  Q  C  S  *  G  V  S  S  Y  L  I  Q  I  *  S  S  T  T  S  F  L  R  I  T  F  I  I  C  W  K  I  I  S  S  S  T  F  R  K  I  S  T  F  *  K  T  R  R  C  T  T  </second_frame>
            <third_frame>   H  L  S   : G  A  L  K  I  C  *  D  E  Q  L  T  G  E  V  E  F  L  G  C  R  K  F  H  R  C  *  N  M  Q  S  P  P  S  T  A  S  S  D  K  D  E  T  T  S  S  S  P  S  N  S  S  P  S  P  P  P  P  A  P  P  T  S  P  P  P  E  S  P  P  P  V  N  S  P  P  P  S  K  E  S  S  P  P  S  S  P  P  P  S  A  S  E  S  P  P  P  P  S  D  S  T  T  T  S  L  N  A  P  E  A  S  P  P  T  S  S  K  F  N  P  P  P  P  V  S  S  G  S  P  S  L  S  A  G  K  L  S  P  P  P  P  S  E  K  S  A  P  F  E  K  P  D  G  A  Q  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96394" stop="96005"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMQSPPSTASSDKDETTSSSPSNSSPSPPPPAPPTSPPPESPPPVNSPPPSKESSPPSSPPPSASESPPPPSDSTTTSLNAPEASPPTSSKFNPPPPVSSGSPSLSAGKLSPPPPSEKSAPFEKPDGAQH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="97775" PGL_stop="97066"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97775" e_stop="97066"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="97775" e_stop="97066" e_length="710"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97775" stop="97066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374767" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTCGATGTGAAAAATGAGATTCCAGCAGTTCTACATTTACCTGTTCTTCAATCTGGACAACGTGGTGCCTTGACGCAGATAGGAGATGAGGTTTGCTATGTTACTGCTTATAATGACTGTGGAAGTGTTTTCATAATAGACATCTATGGAGGTGTAGACATGGGCCTGAAGCGCAGTGTCAGTGTAAATCTTGGTAGCAAGAAGCCTCGTACTCAAGTGCTTGGAATACCCAATGAGAAGTGTTGTGAGGTACTACCTTGTACTGTCAGTGATACTGTGGTGATCCACACGGACACAACAATATACTTTTATCACCTTAGGGACCAGAAGGTTGAGACACTGCAGAGTCCGGGACGAGTGGATACTGATAAGAGGTTCTTACCCTACATAAACAGCCTTGTTATGGTACACAATGCTGGAGAATAACCCAAGGGAGCAGAACAGTGTGGAGTCTGGGACGAATACTGATGAGAGGTTCTCAGCCTACATAAGCTGCCTCGTTATGTTACAAGGATCTGGAGAATATGAAGTAGTGCCCTTGATGATTGTTTCATTTGGGCTAGTAGTATGATTTGTTTTTGTCCTCCAGTCATTTTACTTTCTTGCTGCTAGTTTTCAGTTTTGGTTCTAAACAAGTGCAAACTGTTGGAATTGTATAGTCAGGTTCTCTTTTGACGATAATACTTACAGTTTGGAACTATTACATAT</gDNA_template>
            <first_frame> H  S  M  *  K  M  R  F  Q  Q  F  Y  I  Y  L  F  F  N  L  D  N  V  V  P  *  R  R  *  E  M  R  F  A  M  L  L  L  I  M  T  V  E  V  F  S  *  *  T  S  M  E  V  *  T  W  A  *  S  A  V  S  V  *  I  L  V  A  R  S  L  V  L  K  C  L  E  Y  P  M  R  S  V  V  R  Y  Y  L  V  L  S  V  I  L  W  *  S  T  R  T  Q  Q  Y  T  F  I  T  L  G  T  R  R  L  R  H  C  R  V  R  D  E  W  I  L  I  R  G  S  Y  P  T  *  T  A  L  L  W  Y  T  M  L  E  N  N  P  R  E  Q  N  S  V  E  S  G  T  N  T  D  E  R  F  S  A  Y  I  S  C  L  V  M  L  Q  G  S  G  E  Y  E  V  V  P  L  M  I  V  S  F  G  L  V  V  *  F  V  F  V  L  Q  S  F  Y  F  L  A  A  S  F  Q  F  W  F  *  T  S  A  N  C  W  N  C  I  V  R  F  S  F  D  D  N  T  Y  S  L  E  L  L  H   </first_frame>
            <second_frame>  I  R  C  E  K  *  D  S  S  S  S  T  F  T  C  S  S  I  W  T  T  W  C  L  D  A  D  R  R  *  G  L  L  C  Y  C  L  *  *  L  W  K  C  F  H  N  R  H  L  W  R  C  R  H  G  P  E  A  Q  C  Q  C  K  S  W  *  Q  E  A  S  Y  S  S  A  W  N  T  Q  *  E  V  L  *  G  T  T  L  Y  C  Q  *  Y  C  G  D  P  H  G  H  N  N  I  L  L  S  P  *  G  P  E  G  *  D  T  A  E  S  G  T  S  G  Y  *  *  E  V  L  T  L  H  K  Q  P  C  Y  G  T  Q  C  W  R  I  T  Q  G  S  R  T  V  W  S  L  G  R  I  L  M  R  G  S  Q  P  T  *  A  A  S  L  C  Y  K  D  L  E  N  M  K  *  C  P  *  *  L  F  H  L  G  *  *  Y  D  L  F  L  S  S  S  H  F  T  F  L  L  L  V  F  S  F  G  S  K  Q  V  Q  T  V  G  I  V  *  S  G  S  L  L  T  I  I  L  T  V  W  N  Y  Y  I  </second_frame>
            <third_frame>   F  D  V  K  N  E  I  P  A  V  L  H  L  P  V  L  Q  S  G  Q  R  G  A  L  T  Q  I  G  D  E  V  C  Y  V  T  A  Y  N  D  C  G  S  V  F  I  I  D  I  Y  G  G  V  D  M  G  L  K  R  S  V  S  V  N  L  G  S  K  K  P  R  T  Q  V  L  G  I  P  N  E  K  C  C  E  V  L  P  C  T  V  S  D  T  V  V  I  H  T  D  T  T  I  Y  F  Y  H  L  R  D  Q  K  V  E  T  L  Q  S  P  G  R  V  D  T  D  K  R  F  L  P  Y  I  N  S  L  V  M  V  H  N  A  G  E  *  P  K  G  A  E  Q  C  G  V  W  D  E  Y  *  *  E  V  L  S  L  H  K  L  P  R  Y  V  T  R  I  W  R  I  *  S  S  A  L  D  D  C  F  I  W  A  S  S  M  I  C  F  C  P  P  V  I  L  L  S  C  C  *  F  S  V  L  V  L  N  K  C  K  L  L  E  L  Y  S  Q  V  L  F  *  R  *  Y  L  Q  F  G  T  I  T  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97773" stop="97348"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDVKNEIPAVLHLPVLQSGQRGALTQIGDEVCYVTAYNDCGSVFIIDIYGGVDMGLKRSVSVNLGSKKPRTQVLGIPNEKCCEVLPCTVSDTVVIHTDTTIYFYHLRDQKVETLQSPGRVDTDKRFLPYINSLVMVHNAGE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="99936" PGL_stop="97785"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99936" e_stop="99851"/>
            <exon e_start="99509" e_stop="99459"/>
            <exon e_start="99367" e_stop="99250"/>
            <exon e_start="98499" e_stop="97785"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="99936" e_stop="99851" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.990">
            <gDNA_intron_boundary i_start="99850" i_stop="99510" i_length="341"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="99509" e_stop="99459" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99458" i_stop="99368" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="99367" e_stop="99250" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99249" i_stop="98500" i_length="750"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98499" e_stop="97785" e_length="715"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99936" stop="99851"/>
              <exon start="99509" stop="99459"/>
              <exon start="99367" stop="99250"/>
              <exon start="98499" stop="98182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99918" stop="99851"/>
              <exon start="99509" stop="99459"/>
              <exon start="99367" stop="99250"/>
              <exon start="98499" stop="98105"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99918" stop="99851"/>
              <exon start="99509" stop="99459"/>
              <exon start="99367" stop="99250"/>
              <exon start="98499" stop="98166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98455" stop="97785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98455" stop="97821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98455" stop="97852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98455" stop="97965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209227" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGTTAGGGTTTTCCGGCGATTCTTTGCCATTCTTTCTTGGTTTTCCGGCGACTTTACTCACCAGAATTTTAGCGCATTGCACTTT : TACAGTGAAATTTCTTGAAACCCAAGTTATCATCAAGGGCTCTGCTGATAG : AAAAATGGCATGTTCTGGGATTGACATGCTGAATGATGAATCTTTGGAGGAGGACATGTATTCTGACTCCTCTGAGTTTTACGTTGCTGTTAAACCTCAGGGTGGTGGGATTGACTCG : TTAGCAGAGTTTGACTTGAGAACTGCTGCTTATAAGGTGGAGGAAGGGAACAATGGTTCTAAATATCCTGTCGAAATCATAATGAGAGTGAACATGACGATCAAAGATGTAGCGAAGAGACATATACTGCCTTTCCTCCCCGCTAAATCACTGATGAAGCTTCGGGCAGTCTCCAAAGAATGGAATCAGTGGATAGCTAGTCCATTACTTGCGTACAATCAAAGTTCAACATTTCAGAAGCTTTCAGGCTACTTTTATCAAAGACTGGATAATGTAGATGATCCTCCTATACTTTTGTCTCTGCATCGTTCTGCAATTGGAGTCCCGAGTCCTTCACTTCGTTTCTTGCCTGTGAAGGTTAAAGTACTAAGTTCTAGCAGCGGGTTGCTCCTTTGTCAAGGGAAGGACAGCTATTATGTTTGCAATCCTGCAACCAAAGACTGGAAAAAGCTTCCTCCTCCTCAATATTACCACGGATCTGATCCTGCTGTTGCTCTTGCATTTGATCCTCAGTTCAATATTGAATCATTTTATCGTGTGGTCGCTGCAGTCCCTGTTCTTGATAATCCAGTTGTATGCTTTGAGATTTACTGTTCTGAATCAGATTCATGGAGGTGCTCTCCTTCAGACTGTCTAGAGCTGGAAAATACAAGACTTGCAGGTGGAGGATATTATATGAAGGGGGTGGCTTACTGGAGGAATACATCATCGAATG</gDNA_template>
            <first_frame> S  L  G  F  S  G  D  S  L  P  F  F  L  G  F  P  A  T  L  L  T  R  I  L  A  H  C  T  F :   T  V  K  F  L  E  T  Q  V  I  I  K  G  S  A  D  R :   K  M  A  C  S  G  I  D  M  L  N  D  E  S  L  E  E  D  M  Y  S  D  S  S  E  F  Y  V  A  V  K  P  Q  G  G  G  I  D  S  :  L  A  E  F  D  L  R  T  A  A  Y  K  V  E  E  G  N  N  G  S  K  Y  P  V  E  I  I  M  R  V  N  M  T  I  K  D  V  A  K  R  H  I  L  P  F  L  P  A  K  S  L  M  K  L  R  A  V  S  K  E  W  N  Q  W  I  A  S  P  L  L  A  Y  N  Q  S  S  T  F  Q  K  L  S  G  Y  F  Y  Q  R  L  D  N  V  D  D  P  P  I  L  L  S  L  H  R  S  A  I  G  V  P  S  P  S  L  R  F  L  P  V  K  V  K  V  L  S  S  S  S  G  L  L  L  C  Q  G  K  D  S  Y  Y  V  C  N  P  A  T  K  D  W  K  K  L  P  P  P  Q  Y  Y  H  G  S  D  P  A  V  A  L  A  F  D  P  Q  F  N  I  E  S  F  Y  R  V  V  A  A  V  P  V  L  D  N  P  V  V  C  F  E  I  Y  C  S  E  S  D  S  W  R  C  S  P  S  D  C  L  E  L  E  N  T  R  L  A  G  G  G  Y  Y  M  K  G  V  A  Y  W  R  N  T  S  S  N  </first_frame>
            <second_frame>  R  *  G  F  P  A  I  L  C  H  S  F  L  V  F  R  R  L  Y  S  P  E  F  *  R  I  A  L   : L  Q  *  N  F  L  K  P  K  L  S  S  R  A  L  L  I   : E  K  W  H  V  L  G  L  T  C  *  M  M  N  L  W  R  R  T  C  I  L  T  P  L  S  F  T  L  L  L  N  L  R  V  V  G  L  T  R :   *  Q  S  L  T  *  E  L  L  L  I  R  W  R  K  G  T  M  V  L  N  I  L  S  K  S  *  *  E  *  T  *  R  S  K  M  *  R  R  D  I  Y  C  L  S  S  P  L  N  H  *  *  S  F  G  Q  S  P  K  N  G  I  S  G  *  L  V  H  Y  L  R  T  I  K  V  Q  H  F  R  S  F  Q  A  T  F  I  K  D  W  I  M  *  M  I  L  L  Y  F  C  L  C  I  V  L  Q  L  E  S  R  V  L  H  F  V  S  C  L  *  R  L  K  Y  *  V  L  A  A  G  C  S  F  V  K  G  R  T  A  I  M  F  A  I  L  Q  P  K  T  G  K  S  F  L  L  L  N  I  T  T  D  L  I  L  L  L  L  L  H  L  I  L  S  S  I  L  N  H  F  I  V  W  S  L  Q  S  L  F  L  I  I  Q  L  Y  A  L  R  F  T  V  L  N  Q  I  H  G  G  A  L  L  Q  T  V  *  S  W  K  I  Q  D  L  Q  V  E  D  I  I  *  R  G  W  L  T  G  G  I  H  H  R  M </second_frame>
            <third_frame>   V  R  V  F  R  R  F  F  A  I  L  S  W  F  S  G  D  F  T  H  Q  N  F  S  A  L  H  F  :  Y  S  E  I  S  *  N  P  S  Y  H  Q  G  L  C  *  *  :  K  N  G  M  F  W  D  *  H  A  E  *  *  I  F  G  G  G  H  V  F  *  L  L  *  V  L  R  C  C  *  T  S  G  W  W  D  *  L   : V  S  R  V  *  L  E  N  C  C  L  *  G  G  G  R  E  Q  W  F  *  I  S  C  R  N  H  N  E  S  E  H  D  D  Q  R  C  S  E  E  T  Y  T  A  F  P  P  R  *  I  T  D  E  A  S  G  S  L  Q  R  M  E  S  V  D  S  *  S  I  T  C  V  Q  S  K  F  N  I  S  E  A  F  R  L  L  L  S  K  T  G  *  C  R  *  S  S  Y  T  F  V  S  A  S  F  C  N  W  S  P  E  S  F  T  S  F  L  A  C  E  G  *  S  T  K  F  *  Q  R  V  A  P  L  S  R  E  G  Q  L  L  C  L  Q  S  C  N  Q  R  L  E  K  A  S  S  S  S  I  L  P  R  I  *  S  C  C  C  S  C  I  *  S  S  V  Q  Y  *  I  I  L  S  C  G  R  C  S  P  C  S  *  *  S  S  C  M  L  *  D  L  L  F  *  I  R  F  M  E  V  L  S  F  R  L  S  R  A  G  K  Y  K  T  C  R  W  R  I  L  Y  E  G  G  G  L  L  E  E  Y  I  I  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99936" stop="99851"/>
                    <exon start="99509" stop="99459"/>
                    <exon start="99367" stop="99250"/>
                    <exon start="98499" stop="97786"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLGFSGDSLPFFLGFPATLLTRILAHCTFTVKFLETQVIIKGSADRKMACSGIDMLNDESLEEDMYSDSSEFYVAVKPQGGGIDSLAEFDLRTAAYKVEEGNNGSKYPVEIIMRVNMTIKDVAKRHILPFLPAKSLMKLRAVSKEWNQWIASPLLAYNQSSTFQKLSGYFYQRLDNVDDPPILLSLHRSAIGVPSPSLRFLPVKVKVLSSSSGLLLCQGKDSYYVCNPATKDWKKLPPPQYYHGSDPAVALAFDPQFNIESFYRVVAAVPVLDNPVVCFEIYCSESDSWRCSPSDCLELENTRLAGGGYYMKGVAYWRNTSSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="105134" PGL_stop="104598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105134" e_stop="104598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="105134" e_stop="104598" e_length="537"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105134" stop="104598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAATCAAATGCTTATCATGGATCAGATCCAGCAATTGTGCTCTTATTTGAACCATCATTGCTCAACTTTGTAGCAGAGTACAAAATTATATGTGCTTTTCCATCGACAGATTTTGACAAGGCAACTGAATTTGATATATATTACTCAAGAGAGGGTTGTTGGAAAATTGCTGAGGAGATGTGCTTTGGAAGTAGAACAATATTTCCAAAATCAGGGATCCATGTGAATGGCGTTGTTTACTGGATGACAAGTAAGAATATTCTTGCTTTTGATCTAACAAAGGGTAGGACACAGCTCCTTGAAAGCTATGGCACTCGTGGGTTCTTGGGGACTTTTAGTGGAAAGCTCTGTAAGGTTGATGTCAGTGGTGATATAATCAGCTTAAACGTTTTGGCTAATACCCACTCAAATACAATGCAAATAGGTAGCCAAATCAAAATGTGGTCAGAGAAAGAGATTGTTGTTCTTGACAGTGAAATTGTTGGGGATGGTGCAGCAAGGAACCACACAGTTTTACATGTTGACAGTGATATAA</gDNA_template>
            <first_frame> Q  N  Q  M  L  I  M  D  Q  I  Q  Q  L  C  S  Y  L  N  H  H  C  S  T  L  *  Q  S  T  K  L  Y  V  L  F  H  R  Q  I  L  T  R  Q  L  N  L  I  Y  I  T  Q  E  R  V  V  G  K  L  L  R  R  C  A  L  E  V  E  Q  Y  F  Q  N  Q  G  S  M  *  M  A  L  F  T  G  *  Q  V  R  I  F  L  L  L  I  *  Q  R  V  G  H  S  S  L  K  A  M  A  L  V  G  S  W  G  L  L  V  E  S  S  V  R  L  M  S  V  V  I  *  S  A  *  T  F  W  L  I  P  T  Q  I  Q  C  K  *  V  A  K  S  K  C  G  Q  R  K  R  L  L  F  L  T  V  K  L  L  G  M  V  Q  Q  G  T  T  Q  F  Y  M  L  T  V  I  * </first_frame>
            <second_frame>  K  I  K  C  L  S  W  I  R  S  S  N  C  A  L  I  *  T  I  I  A  Q  L  C  S  R  V  Q  N  Y  M  C  F  S  I  D  R  F  *  Q  G  N  *  I  *  Y  I  L  L  K  R  G  L  L  E  N  C  *  G  D  V  L  W  K  *  N  N  I  S  K  I  R  D  P  C  E  W  R  C  L  L  D  D  K  *  E  Y  S  C  F  *  S  N  K  G  *  D  T  A  P  *  K  L  W  H  S  W  V  L  G  D  F  *  W  K  A  L  *  G  *  C  Q  W  *  Y  N  Q  L  K  R  F  G  *  Y  P  L  K  Y  N  A  N  R  *  P  N  Q  N  V  V  R  E  R  D  C  C  S  *  Q  *  N  C  W  G  W  C  S  K  E  P  H  S  F  T  C  *  Q  *  Y   </second_frame>
            <third_frame>   K  S  N  A  Y  H  G  S  D  P  A  I  V  L  L  F  E  P  S  L  L  N  F  V  A  E  Y  K  I  I  C  A  F  P  S  T  D  F  D  K  A  T  E  F  D  I  Y  Y  S  R  E  G  C  W  K  I  A  E  E  M  C  F  G  S  R  T  I  F  P  K  S  G  I  H  V  N  G  V  V  Y  W  M  T  S  K  N  I  L  A  F  D  L  T  K  G  R  T  Q  L  L  E  S  Y  G  T  R  G  F  L  G  T  F  S  G  K  L  C  K  V  D  V  S  G  D  I  I  S  L  N  V  L  A  N  T  H  S  N  T  M  Q  I  G  S  Q  I  K  M  W  S  E  K  E  I  V  V  L  D  S  E  I  V  G  D  G  A  A  R  N  H  T  V  L  H  V  D  S  D  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105132" stop="104599"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSNAYHGSDPAIVLLFEPSLLNFVAEYKIICAFPSTDFDKATEFDIYYSREGCWKIAEEMCFGSRTIFPKSGIHVNGVVYWMTSKNILAFDLTKGRTQLLESYGTRGFLGTFSGKLCKVDVSGDIISLNVLANTHSNTMQIGSQIKMWSEKEIVVLDSEIVGDGAARNHTVLHVDSDI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="111661" PGL_stop="108531"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111661" e_stop="111037"/>
            <exon e_start="109490" e_stop="109336"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.970"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="111661" e_stop="111037" e_length="625"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="111036" i_stop="109491" i_length="1546"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="109490" e_stop="109336" e_length="155"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111661" stop="111037"/>
              <exon start="109490" stop="109336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111661" stop="111037"/>
              <exon start="109490" stop="109429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427371" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGTACTGCAATTCCCCACGCCTAGCTAGTTGAAATCAGAAAAATGCGGTGTCCGTACTGCTCGGCGGAGCAAGGGCGGTGTACCAGCAGCACCAGTGGCAGACCGATAACCGAGTGCACATCCTGCGGCCGGGTAGTGGAGGAGCGATTAACCCAATCCCACCATCTTTTTCATACCCGTGCCCAAGATTCTCCTCTGTGCCTGGCTACTTCTGATCTCCCCACTCTTCCCATCTCCGCCACTAACGACGATGAAGACCCATTTGAACCCACTGGTTTCATCACCACTTTCTCTACTTGGTCTCTCGAACCCTACCCAGTATTTGCCCAATCCTCCATTTCATTCGCCGGTCACCTTGCAGAGCTCGAGCGGGTCCTCGAAATGACGTCAACTTCCTCCAGTTCGTCCTCTTCTTCTGTCGTGGTGGAAAATCTCCGGGCTTATTTGCAGATTATTGATGTGGCTTCTATTCTGCGACTGGATTCTGATATTTCGGACCACGCGTTTCAGCTCTTCAGGGATTGTTCTTCAGCAACTTGCTTAAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTGCACGCTATCAGGGAAGCCCAAGAGCCGAGAACTCTCCAG : GAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGC</gDNA_template>
            <first_frame> Q  Y  C  N  S  P  R  L  A  S  *  N  Q  K  N  A  V  S  V  L  L  G  G  A  R  A  V  Y  Q  Q  H  Q  W  Q  T  D  N  R  V  H  I  L  R  P  G  S  G  G  A  I  N  P  I  P  P  S  F  S  Y  P  C  P  R  F  S  S  V  P  G  Y  F  *  S  P  H  S  S  H  L  R  H  *  R  R  *  R  P  I  *  T  H  W  F  H  H  H  F  L  Y  L  V  S  R  T  L  P  S  I  C  P  I  L  H  F  I  R  R  S  P  C  R  A  R  A  G  P  R  N  D  V  N  F  L  Q  F  V  L  F  F  C  R  G  G  K  S  P  G  L  F  A  D  Y  *  C  G  F  Y  S  A  T  G  F  *  Y  F  G  P  R  V  S  A  L  Q  G  L  F  F  S  N  L  L  K  E  S  E  C  *  S  A  C  Y  C  C  S  C  A  R  Y  Q  G  S  P  R  A  E  N  S  P   : G  N  I  S  C  G  Q  F  T  S  E  G  N  R  E  V  H  K  D  S  W  R  S  V  T  T  Q  S  T  Y  Q  *  *  F  Y  I  S  P  Y  A  K  V  L  Y  T  P  S  A  E  *  I  C </first_frame>
            <second_frame>  S  T  A  I  P  H  A  *  L  V  E  I  R  K  M  R  C  P  Y  C  S  A  E  Q  G  R  C  T  S  S  T  S  G  R  P  I  T  E  C  T  S  C  G  R  V  V  E  E  R  L  T  Q  S  H  H  L  F  H  T  R  A  Q  D  S  P  L  C  L  A  T  S  D  L  P  T  L  P  I  S  A  T  N  D  D  E  D  P  F  E  P  T  G  F  I  T  T  F  S  T  W  S  L  E  P  Y  P  V  F  A  Q  S  S  I  S  F  A  G  H  L  A  E  L  E  R  V  L  E  M  T  S  T  S  S  S  S  S  S  S  S  V  V  V  E  N  L  R  A  Y  L  Q  I  I  D  V  A  S  I  L  R  L  D  S  D  I  S  D  H  A  F  Q  L  F  R  D  C  S  S  A  T  C  L  R  N  R  S  V  E  A  L  A  T  A  A  L  V  H  A  I  R  E  A  Q  E  P  R  T  L  Q  :  E  I  S  V  A  A  N  L  P  Q  K  E  I  G  K  Y  I  K  I  L  G  E  A  L  Q  L  S  Q  P  I  N  S  N  S  I  S  V  H  M  P  R  F  C  T  L  L  Q  L  N  K  S   </second_frame>
            <third_frame>   V  L  Q  F  P  T  P  S  *  L  K  S  E  K  C  G  V  R  T  A  R  R  S  K  G  G  V  P  A  A  P  V  A  D  R  *  P  S  A  H  P  A  A  G  *  W  R  S  D  *  P  N  P  T  I  F  F  I  P  V  P  K  I  L  L  C  A  W  L  L  L  I  S  P  L  F  P  S  P  P  L  T  T  M  K  T  H  L  N  P  L  V  S  S  P  L  S  L  L  G  L  S  N  P  T  Q  Y  L  P  N  P  P  F  H  S  P  V  T  L  Q  S  S  S  G  S  S  K  *  R  Q  L  P  P  V  R  P  L  L  L  S  W  W  K  I  S  G  L  I  C  R  L  L  M  W  L  L  F  C  D  W  I  L  I  F  R  T  T  R  F  S  S  S  G  I  V  L  Q  Q  L  A  *  G  I  G  V  L  K  R  L  L  L  L  L  L  C  T  L  S  G  K  P  K  S  R  E  L  S  R :   K  Y  Q  L  R  P  I  Y  L  R  R  K  S  G  S  T  *  R  F  L  E  K  R  Y  N  S  V  N  L  S  I  V  I  L  Y  Q  S  I  C  Q  G  F  V  H  S  F  S  *  I  N  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111636" stop="111037"/>
                    <exon start="109490" stop="109338"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>753</number_coding_nucleotides>
                  <number_encoded_amino_acids>251</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVEIRKMRCPYCSAEQGRCTSSTSGRPITECTSCGRVVEERLTQSHHLFHTRAQDSPLCLATSDLPTLPISATNDDEDPFEPTGFITTFSTWSLEPYPVFAQSSISFAGHLAELERVLEMTSTSSSSSSSSVVVENLRAYLQIIDVASILRLDSDISDHAFQLFRDCSSATCLRNRSVEALATAALVHAIREAQEPRTLQEISVAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="109600" e_stop="109577"/>
            <exon e_start="109490" e_stop="109332"/>
            <exon e_start="109078" e_stop="108531"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.993" e_score="0.958"/>
          <exon-intron don_prob="0.988" acc_prob="0.963" e_score="1.000"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="109600" e_stop="109577" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="109576" i_stop="109491" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="109490" e_stop="109332" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.963">
            <gDNA_intron_boundary i_start="109331" i_stop="109079" i_length="253"/>
          </intron>
          <exon e_serial="3" e_score="0.968">
            <gDNA_exon_boundary e_start="109078" e_stop="108531" e_length="548"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109600" stop="109577"/>
              <exon start="109490" stop="109332"/>
              <exon start="109078" stop="108849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109068" stop="108531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446983" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGCTTATTTTTTGCAACTGAGTG : GAAATATCAGTTGCGGCCAATTTACCTCAGAAGGAAATCGGGAAGTACATAAAGATTCTTGGAGAAGCGTTACAACTCAGTCAACCTATCAATAGTAATTCTATATCAGTCCATATGCCAAGGTTTTGTACACTCCTTCAGCTGAATAAATCTGCTCAG : GAGCTGGCGACTCACATTGGTGAAGTAATCATCAATAAATGCTTTTGCACTAGAAGGAATCCAATTAGCATCTCTGCTGCTGCTATATATTTGGCATGTCAACTAGAGGACAAGCGGAAGACCCAGGCTGAAATATGTAAGGTGACTGGACTAACTGAGGTTACTCTTCGTAAGGTGTACAAGGAGCTTTTGGAGAACTGGGATGATCTCCTACCATCAAGTTATAAACCAGTTGTTCCACCAGAGAAGGCTTTTCCTTCAGCTACCATTGCTACAGGCCGTTCATCAACACCGAGAGTTGATATAGTTGAGGGAACTTCATCTGAGAGGGACAAGCCAGTTAAACCAGTCGACTCATTAGATATATCTCCTCAGATCAGAGGCAAGGAGGACTCCGACAGCAAAGATAATATTAATACAACTCAATTATCTTGGCCACCACCATTTTGGAAGCCTCAAGCTCCTGCTGAAGGTGGTGTTAAATCAGCTACAGATAAGAGTCAGAATGCTACTGAAGAAATGGAGATTGATTTATAATATAAATCTCA</gDNA_template>
            <first_frame> M  L  I  F  C  N  *  V  :  E  I  S  V  A  A  N  L  P  Q  K  E  I  G  K  Y  I  K  I  L  G  E  A  L  Q  L  S  Q  P  I  N  S  N  S  I  S  V  H  M  P  R  F  C  T  L  L  Q  L  N  K  S  A  Q  :  E  L  A  T  H  I  G  E  V  I  I  N  K  C  F  C  T  R  R  N  P  I  S  I  S  A  A  A  I  Y  L  A  C  Q  L  E  D  K  R  K  T  Q  A  E  I  C  K  V  T  G  L  T  E  V  T  L  R  K  V  Y  K  E  L  L  E  N  W  D  D  L  L  P  S  S  Y  K  P  V  V  P  P  E  K  A  F  P  S  A  T  I  A  T  G  R  S  S  T  P  R  V  D  I  V  E  G  T  S  S  E  R  D  K  P  V  K  P  V  D  S  L  D  I  S  P  Q  I  R  G  K  E  D  S  D  S  K  D  N  I  N  T  T  Q  L  S  W  P  P  P  F  W  K  P  Q  A  P  A  E  G  G  V  K  S  A  T  D  K  S  Q  N  A  T  E  E  M  E  I  D  L  *  Y  K  S   </first_frame>
            <second_frame>  C  L  F  F  A  T  E  W :   K  Y  Q  L  R  P  I  Y  L  R  R  K  S  G  S  T  *  R  F  L  E  K  R  Y  N  S  V  N  L  S  I  V  I  L  Y  Q  S  I  C  Q  G  F  V  H  S  F  S  *  I  N  L  L  R :   S  W  R  L  T  L  V  K  *  S  S  I  N  A  F  A  L  E  G  I  Q  L  A  S  L  L  L  L  Y  I  W  H  V  N  *  R  T  S  G  R  P  R  L  K  Y  V  R  *  L  D  *  L  R  L  L  F  V  R  C  T  R  S  F  W  R  T  G  M  I  S  Y  H  Q  V  I  N  Q  L  F  H  Q  R  R  L  F  L  Q  L  P  L  L  Q  A  V  H  Q  H  R  E  L  I  *  L  R  E  L  H  L  R  G  T  S  Q  L  N  Q  S  T  H  *  I  Y  L  L  R  S  E  A  R  R  T  P  T  A  K  I  I  L  I  Q  L  N  Y  L  G  H  H  H  F  G  S  L  K  L  L  L  K  V  V  L  N  Q  L  Q  I  R  V  R  M  L  L  K  K  W  R  L  I  Y  N  I  N  L  </second_frame>
            <third_frame>   A  Y  F  L  Q  L  S   : G  N  I  S  C  G  Q  F  T  S  E  G  N  R  E  V  H  K  D  S  W  R  S  V  T  T  Q  S  T  Y  Q  *  *  F  Y  I  S  P  Y  A  K  V  L  Y  T  P  S  A  E  *  I  C  S   : G  A  G  D  S  H  W  *  S  N  H  Q  *  M  L  L  H  *  K  E  S  N  *  H  L  C  C  C  Y  I  F  G  M  S  T  R  G  Q  A  E  D  P  G  *  N  M  *  G  D  W  T  N  *  G  Y  S  S  *  G  V  Q  G  A  F  G  E  L  G  *  S  P  T  I  K  L  *  T  S  C  S  T  R  E  G  F  S  F  S  Y  H  C  Y  R  P  F  I  N  T  E  S  *  Y  S  *  G  N  F  I  *  E  G  Q  A  S  *  T  S  R  L  I  R  Y  I  S  S  D  Q  R  Q  G  G  L  R  Q  Q  R  *  Y  *  Y  N  S  I  I  L  A  T  T  I  L  E  A  S  S  S  C  *  R  W  C  *  I  S  Y  R  *  E  S  E  C  Y  *  R  N  G  D  *  F  I  I  *  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109579" stop="109577"/>
                    <exon start="109490" stop="109332"/>
                    <exon start="109078" stop="108542"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEISVAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVIINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSSYKPVVPPEKAFPSATIATGRSSTPRVDIVEGTSSERDKPVKPVDSLDISPQIRGKEDSDSKDNINTTQLSWPPPFWKPQAPAEGGVKSATDKSQNATEEMEIDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="112939" PGL_stop="117340"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112939" e_stop="113320"/>
            <exon e_start="113484" e_stop="113699"/>
            <exon e_start="117174" e_stop="117340"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.862"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="112939" e_stop="113320" e_length="382"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="1.000">
            <gDNA_intron_boundary i_start="113321" i_stop="113483" i_length="163"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="113484" e_stop="113699" e_length="216"/>
          </exon>
          <intron i_serial="2" don_prob="0.923" acc_prob="0.996">
            <gDNA_intron_boundary i_start="113700" i_stop="117173" i_length="3474"/>
          </intron>
          <exon e_serial="3" e_score="0.862">
            <gDNA_exon_boundary e_start="117174" e_stop="117340" e_length="167"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112939" stop="113320"/>
              <exon start="113484" stop="113699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112939" stop="113315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113058" stop="113320"/>
              <exon start="113484" stop="113699"/>
              <exon start="117174" stop="117340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619944" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAATAGATTATCCAGGAGAATCCCAGAATAGAGATGCAATCAAATTCAAATAAACCAAACGTACATATAAAAGGGAAAAGGGAAAAGGCAAAAAGGAATTTTATTTGTTCAAAAAAGAGAAAGAAGGAATGAGGGATGACGATCTTCCCATATCAACGCCAACAGCACCTTCATCGTCGTTCACGACTTCGAAGAAGGAAACTTCCTATTTTGCCATTTTCGGTAGAGGTCGTTATAAGTTTTGGGCCTTTGCCGCTATCTCATTGTTAGCTTTGTGGTCTATGTTCACCGGAACTGTTACCCTCCGTTGGTCCGCCGGTAACCTCAACGCCATATCCGATGACATCGACATTCCCCTCCCCGAAGATCTTGACGTTCTC : GAAATGGAAGAAAGGGAGAAGTTAGTGAAGCATATGTGGGATGTATACACAAACAGCCGTGGGATCAAATTGTTAAAGTTTTGGCAGGAAGCATTTGAGGCTGCCTATGAGGAGTTAGCCAGTGACGTCCCTGGAGTCCCAGAGGATGCCCTTTCTGAGATTGCTAAGATGTCTGTACGCTACATTCCTATTGAATCACCACCTCTTCATTCGTCG : GGAATTCGTGAATTAAGTCTAAGGCAAATGAAGAGGGAGCAAACAACTGCAACAGGGAGAAAGTTATGACTTGGAGAATATCAATCCCCATTTGTGTGGTCACCGCTTTTCACACACATGAATGATAGATTTATCCCATCTGCTGTCTGGTTATTGTGAAATAGCAT</gDNA_template>
            <first_frame> E  N  R  L  S  R  R  I  P  E  *  R  C  N  Q  I  Q  I  N  Q  T  Y  I  *  K  G  K  G  K  R  Q  K  G  I  L  F  V  Q  K  R  E  R  R  N  E  G  *  R  S  S  H  I  N  A  N  S  T  F  I  V  V  H  D  F  E  E  G  N  F  L  F  C  H  F  R  *  R  S  L  *  V  L  G  L  C  R  Y  L  I  V  S  F  V  V  Y  V  H  R  N  C  Y  P  P  L  V  R  R  *  P  Q  R  H  I  R  *  H  R  H  S  P  P  R  R  S  *  R  S   : R  N  G  R  K  G  E  V  S  E  A  Y  V  G  C  I  H  K  Q  P  W  D  Q  I  V  K  V  L  A  G  S  I  *  G  C  L  *  G  V  S  Q  *  R  P  W  S  P  R  G  C  P  F  *  D  C  *  D  V  C  T  L  H  S  Y  *  I  T  T  S  S  F  V   : G  N  S  *  I  K  S  K  A  N  E  E  G  A  N  N  C  N  R  E  K  V  M  T  W  R  I  S  I  P  I  C  V  V  T  A  F  H  T  H  E  *  *  I  Y  P  I  C  C  L  V  I  V  K  *  H </first_frame>
            <second_frame>  K  I  D  Y  P  G  E  S  Q  N  R  D  A  I  K  F  K  *  T  K  R  T  Y  K  R  E  K  G  K  G  K  K  E  F  Y  L  F  K  K  E  K  E  G  M  R  D  D  D  L  P  I  S  T  P  T  A  P  S  S  S  F  T  T  S  K  K  E  T  S  Y  F  A  I  F  G  R  G  R  Y  K  F  W  A  F  A  A  I  S  L  L  A  L  W  S  M  F  T  G  T  V  T  L  R  W  S  A  G  N  L  N  A  I  S  D  D  I  D  I  P  L  P  E  D  L  D  V  L  :  E  M  E  E  R  E  K  L  V  K  H  M  W  D  V  Y  T  N  S  R  G  I  K  L  L  K  F  W  Q  E  A  F  E  A  A  Y  E  E  L  A  S  D  V  P  G  V  P  E  D  A  L  S  E  I  A  K  M  S  V  R  Y  I  P  I  E  S  P  P  L  H  S  S  :  G  I  R  E  L  S  L  R  Q  M  K  R  E  Q  T  T  A  T  G  R  K  L  *  L  G  E  Y  Q  S  P  F  V  W  S  P  L  F  T  H  M  N  D  R  F  I  P  S  A  V  W  L  L  *  N  S   </second_frame>
            <third_frame>   K  *  I  I  Q  E  N  P  R  I  E  M  Q  S  N  S  N  K  P  N  V  H  I  K  G  K  R  E  K  A  K  R  N  F  I  C  S  K  K  R  K  K  E  *  G  M  T  I  F  P  Y  Q  R  Q  Q  H  L  H  R  R  S  R  L  R  R  R  K  L  P  I  L  P  F  S  V  E  V  V  I  S  F  G  P  L  P  L  S  H  C  *  L  C  G  L  C  S  P  E  L  L  P  S  V  G  P  P  V  T  S  T  P  Y  P  M  T  S  T  F  P  S  P  K  I  L  T  F  S :   K  W  K  K  G  R  S  *  *  S  I  C  G  M  Y  T  Q  T  A  V  G  S  N  C  *  S  F  G  R  K  H  L  R  L  P  M  R  S  *  P  V  T  S  L  E  S  Q  R  M  P  F  L  R  L  L  R  C  L  Y  A  T  F  L  L  N  H  H  L  F  I  R  R :   E  F  V  N  *  V  *  G  K  *  R  G  S  K  Q  L  Q  Q  G  E  S  Y  D  L  E  N  I  N  P  H  L  C  G  H  R  F  S  H  T  *  M  I  D  L  S  H  L  L  S  G  Y  C  E  I  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112994" stop="113320"/>
                    <exon start="113484" stop="113699"/>
                    <exon start="117174" stop="117242"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKRTYKREKGKGKKEFYLFKKEKEGMRDDDLPISTPTAPSSSFTTSKKETSYFAIFGRGRYKFWAFAAISLLALWSMFTGTVTLRWSAGNLNAISDDIDIPLPEDLDVLEMEEREKLVKHMWDVYTNSRGIKLLKFWQEAFEAAYEELASDVPGVPEDALSEIAKMSVRYIPIESPPLHSSGIRELSLRQMKREQTTATGRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="126740" PGL_stop="128345"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126740" e_stop="127433"/>
            <exon e_start="127981" e_stop="128345"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="126740" e_stop="127433" e_length="694"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="127434" i_stop="127980" i_length="547"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="127981" e_stop="128345" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126740" stop="127433"/>
              <exon start="127981" stop="128345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126740" stop="127315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551210" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126745" stop="127433"/>
              <exon start="127981" stop="128025"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262920" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126745" stop="127337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126745" stop="127228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126747" stop="127315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689027" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGGGAAAAAGTTTGAAGCTTCGGTTCTCCAGAGTTATTGCTTCTTTCAATTCGTGCCGTTCGAAAAACCCTTCTTCTCTTCCCCAAAATCCTAATTTCTTCCCACATAAGCTCACTAGTACAAAACACATTTCCCCCGATTTCCCTCTTATTGATCAAAATCAAAATCAAAATCACCGTAATTACGTGCCAGAATCCACGATGATCTCCGTTGGGTGTTGTAGATCAGAATTCAAGTGGGAGAAAGAAGAGAAGTTTCACGTGGTTTCTAGTTCCTTCGTGTCTGAAGAAGAAGAATGTGAAGAGGAGATCAATTTGGCCTTACGACCTCCTCTTACACCTCCGCGATTCAGTAGAATTGTTGTTGAGAAGAAGAAGAAGAAACAACAGCGAGTTAAAAAAACGAAAACAAAAAGTAGAATCATCCGAATGAGTACTTCCTCAGCTGATGAGTACAGCGGGATATTAAGCGGTACTAATACTGATTGGGATAATAATGAAGAGGAAACTGAATCTTTAGTTTCATCTTCCAGAAGCTGTTACGATTTCTCAAGCGATGACTCATCTACTGATTTCAACCCTCACTTAGAAACCATATGTGAGACCACTACAATGAGGCGTCGTCACAAGAGAAATGCCAACACCAAGAGGAGATCAATCAAGCAATCCAGACCAAGTTTTTCCTCTTCAAAAG : GTAGAAGATCGTCGGTTTCTACGTCATCAGATAGCGAGCTACCGGCAAGGTTATCGGTGTTTAAGAAGCTGATACCGTGTAGTGTGGATGGGAAAGTGAAGGAGAGTTTCGCGATAGTGAAGAAATCTCAGGACCCGTACTAAGATTTCAAGAGATCGATGATGGAAATGATTTTAGAGAAGGAAATGTTTGAGAAGAATGAGCTGGAACAGCTTTTACAATGTTTTCTGTCGTTGAACGGAAAGCATTATCATGGAGTGATAGTTGAGGCGTTCTCAGACATTTGGGAGACTTTGTTTTTAGGTAATAATGATAGAGTAAGGAGGATGTCAATTCATGATCCCACACCCACCTACTGTAGGTAG</gDNA_template>
            <first_frame> M  G  K  S  L  K  L  R  F  S  R  V  I  A  S  F  N  S  C  R  S  K  N  P  S  S  L  P  Q  N  P  N  F  F  P  H  K  L  T  S  T  K  H  I  S  P  D  F  P  L  I  D  Q  N  Q  N  Q  N  H  R  N  Y  V  P  E  S  T  M  I  S  V  G  C  C  R  S  E  F  K  W  E  K  E  E  K  F  H  V  V  S  S  S  F  V  S  E  E  E  E  C  E  E  E  I  N  L  A  L  R  P  P  L  T  P  P  R  F  S  R  I  V  V  E  K  K  K  K  K  Q  Q  R  V  K  K  T  K  T  K  S  R  I  I  R  M  S  T  S  S  A  D  E  Y  S  G  I  L  S  G  T  N  T  D  W  D  N  N  E  E  E  T  E  S  L  V  S  S  S  R  S  C  Y  D  F  S  S  D  D  S  S  T  D  F  N  P  H  L  E  T  I  C  E  T  T  T  M  R  R  R  H  K  R  N  A  N  T  K  R  R  S  I  K  Q  S  R  P  S  F  S  S  S  K   : G  R  R  S  S  V  S  T  S  S  D  S  E  L  P  A  R  L  S  V  F  K  K  L  I  P  C  S  V  D  G  K  V  K  E  S  F  A  I  V  K  K  S  Q  D  P  Y  *  D  F  K  R  S  M  M  E  M  I  L  E  K  E  M  F  E  K  N  E  L  E  Q  L  L  Q  C  F  L  S  L  N  G  K  H  Y  H  G  V  I  V  E  A  F  S  D  I  W  E  T  L  F  L  G  N  N  D  R  V  R  R  M  S  I  H  D  P  T  P  T  Y  C  R  * </first_frame>
            <second_frame>  W  E  K  V  *  S  F  G  S  P  E  L  L  L  L  S  I  R  A  V  R  K  T  L  L  L  F  P  K  I  L  I  S  S  H  I  S  S  L  V  Q  N  T  F  P  P  I  S  L  L  L  I  K  I  K  I  K  I  T  V  I  T  C  Q  N  P  R  *  S  P  L  G  V  V  D  Q  N  S  S  G  R  K  K  R  S  F  T  W  F  L  V  P  S  C  L  K  K  K  N  V  K  R  R  S  I  W  P  Y  D  L  L  L  H  L  R  D  S  V  E  L  L  L  R  R  R  R  R  N  N  S  E  L  K  K  R  K  Q  K  V  E  S  S  E  *  V  L  P  Q  L  M  S  T  A  G  Y  *  A  V  L  I  L  I  G  I  I  M  K  R  K  L  N  L  *  F  H  L  P  E  A  V  T  I  S  Q  A  M  T  H  L  L  I  S  T  L  T  *  K  P  Y  V  R  P  L  Q  *  G  V  V  T  R  E  M  P  T  P  R  G  D  Q  S  S  N  P  D  Q  V  F  P  L  Q  K  :  V  E  D  R  R  F  L  R  H  Q  I  A  S  Y  R  Q  G  Y  R  C  L  R  S  *  Y  R  V  V  W  M  G  K  *  R  R  V  S  R  *  *  R  N  L  R  T  R  T  K  I  S  R  D  R  *  W  K  *  F  *  R  R  K  C  L  R  R  M  S  W  N  S  F  Y  N  V  F  C  R  *  T  E  S  I  I  M  E  *  *  L  R  R  S  Q  T  F  G  R  L  C  F  *  V  I  M  I  E  *  G  G  C  Q  F  M  I  P  H  P  P  T  V  G   </second_frame>
            <third_frame>   G  K  K  F  E  A  S  V  L  Q  S  Y  C  F  F  Q  F  V  P  F  E  K  P  F  F  S  S  P  K  S  *  F  L  P  T  *  A  H  *  Y  K  T  H  F  P  R  F  P  S  Y  *  S  K  S  K  S  K  S  P  *  L  R  A  R  I  H  D  D  L  R  W  V  L  *  I  R  I  Q  V  G  E  R  R  E  V  S  R  G  F  *  F  L  R  V  *  R  R  R  M  *  R  G  D  Q  F  G  L  T  T  S  S  Y  T  S  A  I  Q  *  N  C  C  *  E  E  E  E  E  T  T  A  S  *  K  N  E  N  K  K  *  N  H  P  N  E  Y  F  L  S  *  *  V  Q  R  D  I  K  R  Y  *  Y  *  L  G  *  *  *  R  G  N  *  I  F  S  F  I  F  Q  K  L  L  R  F  L  K  R  *  L  I  Y  *  F  Q  P  S  L  R  N  H  M  *  D  H  Y  N  E  A  S  S  Q  E  K  C  Q  H  Q  E  E  I  N  Q  A  I  Q  T  K  F  F  L  F  K  R :   *  K  I  V  G  F  Y  V  I  R  *  R  A  T  G  K  V  I  G  V  *  E  A  D  T  V  *  C  G  W  E  S  E  G  E  F  R  D  S  E  E  I  S  G  P  V  L  R  F  Q  E  I  D  D  G  N  D  F  R  E  G  N  V  *  E  E  *  A  G  T  A  F  T  M  F  S  V  V  E  R  K  A  L  S  W  S  D  S  *  G  V  L  R  H  L  G  D  F  V  F  R  *  *  *  *  S  K  E  D  V  N  S  *  S  H  T  H  L  L  *  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126740" stop="127433"/>
                    <exon start="127981" stop="128123"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>834</number_coding_nucleotides>
                  <number_encoded_amino_acids>278</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGKSLKLRFSRVIASFNSCRSKNPSSLPQNPNFFPHKLTSTKHISPDFPLIDQNQNQNHRNYVPESTMISVGCCRSEFKWEKEEKFHVVSSSFVSEEEECEEEINLALRPPLTPPRFSRIVVEKKKKKQQRVKKTKTKSRIIRMSTSSADEYSGILSGTNTDWDNNEEETESLVSSSRSCYDFSSDDSSTDFNPHLETICETTTMRRRHKRNANTKRRSIKQSRPSFSSSKGRRSSVSTSSDSELPARLSVFKKLIPCSVDGKVKESFAIVKKSQDPY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128124" stop="128345"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DFKRSMMEMILEKEMFEKNELEQLLQCFLSLNGKHYHGVIVEAFSDIWETLFLGNNDRVRRMSIHDPTPTYCR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="131410" PGL_stop="137159"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131410" e_stop="131440"/>
            <exon e_start="136756" e_stop="136768"/>
            <exon e_start="136861" e_stop="137159"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.797" e_score="0.645"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.769"/>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.645">
            <gDNA_exon_boundary e_start="131410" e_stop="131440" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.797">
            <gDNA_intron_boundary i_start="131441" i_stop="136755" i_length="5315"/>
          </intron>
          <exon e_serial="2" e_score="0.769">
            <gDNA_exon_boundary e_start="136756" e_stop="136768" e_length="13"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136769" i_stop="136860" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="0.906">
            <gDNA_exon_boundary e_start="136861" e_stop="137159" e_length="299"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131410" stop="131440"/>
              <exon start="136756" stop="136768"/>
              <exon start="136861" stop="137159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E609332" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCAATTATAATTTTTTAAAAAAATAAAAA : GGGTGGGAGGATA : TCTAGCTTTAAAGACAACAGAGACATAATTTTTACATTAAGCAATAACATCAAAATGATAATTCATGATGTTACTACAAGCTTAGTCTAAGGTTTACCAACAATTTGAAGAATATGACTCTGGCAATATGATGATAAAAATCTAAAATCACTTGTAGATAAGGGCATCACGACCAGGTCCTATACCAATGTAATGGATAGGTACCCCAACAAGCTCCTCTATCCTTTCTACATACTCGCGTGCAGCCTTAGGCAAGTCAGAATACTTCCTGATGGAAGAAATATCACTCTTCCACCCAG</gDNA_template>
            <first_frame> F  Q  L  *  F  F  K  K  I  K   : R  V  G  G  Y :   L  A  L  K  T  T  E  T  *  F  L  H  *  A  I  T  S  K  *  *  F  M  M  L  L  Q  A  *  S  K  V  Y  Q  Q  F  E  E  Y  D  S  G  N  M  M  I  K  I  *  N  H  L  *  I  R  A  S  R  P  G  P  I  P  M  *  W  I  G  T  P  T  S  S  S  I  L  S  T  Y  S  R  A  A  L  G  K  S  E  Y  F  L  M  E  E  I  S  L  F  H  P  </first_frame>
            <second_frame>  F  N  Y  N  F  L  K  K  *  K  :  G  W  E  D   : I  *  L  *  R  Q  Q  R  H  N  F  Y  I  K  Q  *  H  Q  N  D  N  S  *  C  Y  Y  K  L  S  L  R  F  T  N  N  L  K  N  M  T  L  A  I  *  *  *  K  S  K  I  T  C  R  *  G  H  H  D  Q  V  L  Y  Q  C  N  G  *  V  P  Q  Q  A  P  L  S  F  L  H  T  R  V  Q  P  *  A  S  Q  N  T  S  *  W  K  K  Y  H  S  S  T  Q </second_frame>
            <third_frame>   S  I  I  I  F  *  K  N  K  K :   G  G  R  I  :  S  S  F  K  D  N  R  D  I  I  F  T  L  S  N  N  I  K  M  I  I  H  D  V  T  T  S  L  V  *  G  L  P  T  I  *  R  I  *  L  W  Q  Y  D  D  K  N  L  K  S  L  V  D  K  G  I  T  T  R  S  Y  T  N  V  M  D  R  Y  P  N  K  L  L  Y  P  F  Y  I  L  A  C  S  L  R  Q  V  R  I  L  P  D  G  R  N  I  T  L  P  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="139799" PGL_stop="131733"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139799" e_stop="139386"/>
            <exon e_start="138905" e_stop="138213"/>
            <exon e_start="137903" e_stop="137592"/>
            <exon e_start="137178" e_stop="136836"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="0.929"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="139799" e_stop="139386" e_length="414"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.976">
            <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480"/>
          </intron>
          <exon e_serial="2" e_score="0.929">
            <gDNA_exon_boundary e_start="138905" e_stop="138213" e_length="693"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="137903" e_stop="137592" e_length="312"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="137178" e_stop="136836" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139799" stop="139386"/>
              <exon start="138905" stop="138705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139799" stop="139386"/>
              <exon start="138905" stop="138851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139793" stop="139386"/>
              <exon start="138905" stop="138715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139789" stop="139386"/>
              <exon start="138905" stop="138761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139772" stop="139386"/>
              <exon start="138905" stop="138640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139656" stop="139386"/>
              <exon start="138905" stop="138525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139536" stop="139386"/>
              <exon start="138905" stop="138519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139484" stop="139386"/>
              <exon start="138905" stop="138244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138725" stop="138213"/>
              <exon start="137903" stop="137654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138725" stop="138213"/>
              <exon start="137903" stop="137805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138714" stop="138213"/>
              <exon start="137903" stop="137691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138588" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="137088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588852" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138578" stop="138213"/>
              <exon start="137903" stop="137658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480880" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138550" stop="138213"/>
              <exon start="137903" stop="137592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138326" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605780" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138308" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539416" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138292" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450579" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138254" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137828" stop="137592"/>
              <exon start="137178" stop="136837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284434" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137149" stop="136877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217414" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAACATTTCTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAG : GGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTG : GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG : GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAGGAAA</gDNA_template>
            <first_frame> N  N  I  S  Y  S  S  L  L  H  I  S  V  Y  S  V  H  S  A  T  A  R  R  R  G  T  T  I  T  M  N  I  S  T  L  R  L  D  S  N  P  I  T  T  A  T  A  T  H  R  N  G  I  L  G  C  N  G  T  Y  S  Y  R  F  N  Q  F  Q  Q  R  K  K  T  A  S  I  V  V  C  S  T  K  P  L  A  S  V  V  D  H  Q  G  V  N  E  S  G  L  R  R  I  E  S  L  S  Q  V  S  G  V  L  G  C  Q  W  G  D  E  G  K  G  K  L  V  D  I  L  A  K  H  F  D  I  V  A  R  C  Q  :  G  G  A  N  A  G  H  T  I  Y  N  S  E  G  K  K  F  A  L  H  L  V  P  S  G  I  L  N  E  E  T  L  C  V  I  G  N  G  V  V  V  H  L  P  G  L  F  K  E  I  D  G  L  E  A  N  G  V  S  C  Q  G  R  I  L  V  S  D  R  A  H  L  L  F  D  F  H  Q  E  I  D  G  L  R  E  A  E  L  A  K  S  F  I  G  T  T  K  R  G  I  G  P  C  Y  S  S  K  V  I  R  N  G  L  R  V  S  D  L  R  H  M  D  T  F  P  Q  K  L  D  L  L  L  S  D  A  A  A  R  F  P  G  F  K  Y  G  P  D  M  L  R  E  E  V  E  R  Y  K  K  F  A  E  R  L  E  P  F  V  T  D  T  V  H  F  M  N  D  A  I  S  Q  K  K  K  I  L  V  E  G  G  Q  A  T  M  L  D  I  D  F  G  T  Y  P  F  V  T  S  S  S  P  S  A  G  G  I  C  T  G  L  G  I  A  P  K  V  V  G  D  L  V  G  V  :  V  K  A  Y  T  T  R  V  G  S  G  P  F  P  T  E  I  M  G  K  G  G  D  L  L  R  F  A  G  Q  E  F  G  T  T  T  G  R  P  R  R  C  G  W  L  D  I  V  A  L  K  F  C  C  Q  I  N  G  F  A  S  L  N  L  T  K  L  D  V  L  S  D  L  P  E  I  Q  L  G  V  T  Y  R  H  P  D  G  S  A  L  H  S  F  P  S  D  L  R  L  L  E  Q  I  K  :  V  E  Y  E  V  L  P  G  W  K  S  D  I  S  S  I  R  K  Y  S  D  L  P  K  A  A  R  E  Y  V  E  R  I  E  E  L  V  G  V  P  I  H  Y  I  G  I  G  P  G  R  D  A  L  I  Y  K  *  F  *  I  F  I  I  I  L  P  E  S  Y  S  S  N  C  W  *  T  L  D  *  A  C  S  N  I  M  N  Y  H  F  D  V  I  A  *  C  K  N  Y  V  S  V  V  F  K  A  R  N  F  V  R  P  P  K  E  </first_frame>
            <second_frame>  I  T  F  L  I  P  L  S  C  I  S  P  F  I  A  C  T  A  Q  P  H  A  A  A  A  L  P  L  P  *  T  S  Q  L  *  D  S  I  P  I  Q  S  L  R  Q  R  R  L  T  G  M  G  S  S  V  A  M  G  P  I  V  I  G  S  I  S  S  S  R  G  R  R  L  L  Q  L  S  F  V  R  Q  S  L  L  P  R  *  W  T  I  R  G  L  M  S  Q  D  *  D  E  L  S  H  S  V  R  Y  P  A  C  W  V  A  N  G  A  M  K  E  R  E  S  S  L  I  Y  W  L  N  I  S  T  L  L  L  V  V  R :   V  E  P  M  L  G  I  L  Y  T  I  L  R  G  R  S  L  L  C  T  L  S  L  L  G  F  S  T  R  K  L  C  V  L  L  V  M  E  L  W  C  I  Y  R  D  F  L  K  K  L  M  V  L  K  L  M  E  F  L  A  K  E  G  S  W  Y  L  I  V  H  T  C  Y  L  I  F  T  K  K  *  M  G  L  E  K  L  S  *  L  N  P  L  L  E  P  P  R  E  A  L  G  H  A  I  Q  A  R  L  L  E  M  A  *  E  *  V  I  *  G  I  W  T  H  S  P  K  S  L  I  F  Y  Y  Q  M  P  L  Q  D  S  Q  A  L  S  M  V  L  T  C  S  G  K  K  W  N  A  T  R  N  L  L  R  G  W  N  P  S  L  Q  I  P  C  T  S  *  M  M  L  Y  L  R  K  R  R  F  W  W  K  V  V  R  Q  Q  C  W  I  *  I  L  E  H  T  L  L  *  L  H  P  V  H  R  L  V  E  S  A  Q  V  L  A  L  L  P  K  L  L  V  I  L  L  V  W :   L  R  H  I  P  Q  E  L  V  L  V  L  F  Q  Q  K  S  W  A  K  V  V  T  F  F  V  L  L  G  R  S  L  A  Q  P  L  D  V  R  V  V  V  V  G  *  T  *  L  R  *  N  S  A  V  K  *  M  D  L  L  L  L  T  L  Q  N  *  T  C  C  Q  I  Y  Q  K  F  N  W  V  L  L  T  G  I  L  M  A  Q  H  Y  I  L  F  P  L  I  F  V  F  L  S  K  *  R :   W  S  M  K  F  C  L  G  G  R  V  I  F  L  P  S  G  S  I  L  T  C  L  R  L  H  A  S  M  *  K  G  *  R  S  L  L  G  Y  L  S  I  T  L  V  *  D  L  V  V  M  P  L  S  T  S  D  F  R  F  L  S  S  Y  C  Q  S  H  I  L  Q  I  V  G  K  P  *  T  K  L  V  V  T  S  *  I  I  I  L  M  L  L  L  N  V  K  I  M  S  L  L  S  L  K  L  E  I  L  L  D  L  P  R  K </second_frame>
            <third_frame>   *  H  F  L  F  L  S  L  A  Y  L  R  L  *  R  A  Q  R  N  R  T  P  P  R  H  Y  H  Y  H  E  H  L  N  S  K  T  R  F  Q  S  N  H  Y  G  N  G  D  S  P  E  W  D  P  R  L  Q  W  D  L  *  L  *  V  Q  S  V  P  A  E  E  E  D  C  F  N  C  R  L  F  D  K  A  S  C  L  G  S  G  P  S  G  G  *  *  V  R  T  E  T  N  *  V  T  Q  S  G  I  R  R  V  G  L  P  M  G  R  *  R  K  G  K  A  R  *  Y  T  G  *  T  F  R  H  C  C  S  L  S   : G  W  S  Q  C  W  A  Y  Y  I  Q  F  *  G  E  E  V  C  S  A  P  C  P  F  W  D  S  Q  R  G  N  S  V  C  Y  W  *  W  S  C  G  A  S  T  G  T  F  *  R  N  *  W  S  *  S  *  W  S  F  L  P  R  K  D  L  G  I  *  S  C  T  L  V  I  *  F  S  P  R  N  R  W  A  *  R  S  *  A  S  *  I  L  Y  W  N  H  Q  E  R  H  W  A  M  L  F  K  Q  G  Y  *  K  W  L  K  S  K  *  F  K  A  Y  G  H  I  P  P  K  A  *  S  F  I  I  R  C  R  C  K  I  P  R  L  *  V  W  S  *  H  A  Q  G  R  S  G  T  L  Q  E  I  C  *  E  V  G  T  L  R  Y  R  Y  R  A  L  H  E  *  C  Y  I  S  E  K  E  D  F  G  G  R  W  S  G  N  N  V  G  Y  R  F  W  N  I  P  F  C  D  F  I  Q  S  I  G  W  W  N  L  H  R  S  W  H  C  S  Q  S  C  W  *  S  C  W  C   : G  *  G  I  Y  H  K  S  W  F  W  S  F  S  N  R  N  H  G  Q  R  W  *  P  S  S  F  C  W  A  G  V  W  H  N  H  W  T  S  A  S  L  W  L  A  R  H  S  C  A  E  I  L  L  S  N  K  W  I  C  F  S  *  P  Y  K  T  R  R  A  V  R  S  T  R  N  S  I  G  C  Y  L  Q  A  S  *  W  L  S  I  T  F  F  S  L  *  S  S  S  S  *  A  N  K   : G  G  V  *  S  F  A  W  V  E  E  *  Y  F  F  H  Q  E  V  F  *  L  A  *  G  C  T  R  V  C  R  K  D  R  G  A  C  W  G  T  Y  P  L  H  W  Y  R  T  W  S  *  C  P  Y  L  Q  V  I  L  D  F  Y  H  H  I  A  R  V  I  F  F  K  L  L  V  N  L  R  L  S  L  *  *  H  H  E  L  S  F  *  C  Y  C  L  M  *  K  L  C  L  C  C  L  *  S  *  K  F  C  *  T  S  Q  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139799" stop="139386"/>
                    <exon start="138905" stop="138213"/>
                    <exon start="137903" stop="137592"/>
                    <exon start="137178" stop="137008"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1587</number_coding_nucleotides>
                  <number_encoded_amino_acids>529</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNISYSSLLHISVYSVHSATARRRGTTITMNISTLRLDSNPITTATATHRNGILGCNGTYSYRFNQFQQRKKTASIVVCSTKPLASVVDHQGVNESGLRRIESLSQVSGVLGCQWGDEGKGKLVDILAKHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEETLCVIGNGVVVHLPGLFKEIDGLEANGVSCQGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGLRVSDLRHMDTFPQKLDLLLSDAAARFPGFKYGPDMLREEVERYKKFAERLEPFVTDTVHFMNDAISQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPKVVGDLVGVVKAYTTRVGSGPFPTEIMGKGGDLLRFAGQEFGTTTGRPRRCGWLDIVALKFCCQINGFASLNLTKLDVLSDLPEIQLGVTYRHPDGSALHSFPSDLRLLEQIKVEYEVLPGWKSDISSIRKYSDLPKAAREYVERIEELVGVPIHYIGIGPGRDALIYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="139799" e_stop="139386"/>
            <exon e_start="138905" e_stop="138213"/>
            <exon e_start="137903" e_stop="137592"/>
            <exon e_start="137178" e_stop="136896"/>
            <exon e_start="132208" e_stop="132176"/>
            <exon e_start="131745" e_stop="131733"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="0.929"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.974"/>
          <exon-intron don_prob="0.000" acc_prob="0.372" e_score="0.980"/>
          <exon-intron don_prob="0.909" acc_prob="0.011" e_score="0.697"/>
          <exon-only e_score="0.846"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="139799" e_stop="139386" e_length="414"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.976">
            <gDNA_intron_boundary i_start="139385" i_stop="138906" i_length="480"/>
          </intron>
          <exon e_serial="2" e_score="0.929">
            <gDNA_exon_boundary e_start="138905" e_stop="138213" e_length="693"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309"/>
          </intron>
          <exon e_serial="3" e_score="0.974">
            <gDNA_exon_boundary e_start="137903" e_stop="137592" e_length="312"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="137178" e_stop="136896" e_length="283"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.372">
            <gDNA_intron_boundary i_start="136895" i_stop="132209" i_length="4687"/>
          </intron>
          <exon e_serial="5" e_score="0.697">
            <gDNA_exon_boundary e_start="132208" e_stop="132176" e_length="33"/>
          </exon>
          <intron i_serial="5" don_prob="0.909" acc_prob="0.011">
            <gDNA_intron_boundary i_start="132175" i_stop="131746" i_length="430"/>
          </intron>
          <exon e_serial="6" e_score="0.846">
            <gDNA_exon_boundary e_start="131745" e_stop="131733" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139799" stop="139386"/>
              <exon start="138905" stop="138705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139799" stop="139386"/>
              <exon start="138905" stop="138851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139793" stop="139386"/>
              <exon start="138905" stop="138715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139789" stop="139386"/>
              <exon start="138905" stop="138761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139772" stop="139386"/>
              <exon start="138905" stop="138640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139656" stop="139386"/>
              <exon start="138905" stop="138525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139536" stop="139386"/>
              <exon start="138905" stop="138519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139484" stop="139386"/>
              <exon start="138905" stop="138244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138725" stop="138213"/>
              <exon start="137903" stop="137654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138725" stop="138213"/>
              <exon start="137903" stop="137805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138714" stop="138213"/>
              <exon start="137903" stop="137691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138588" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="137088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588852" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138578" stop="138213"/>
              <exon start="137903" stop="137658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480880" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138550" stop="138213"/>
              <exon start="137903" stop="137592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138326" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605780" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138254" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137141" stop="136896"/>
              <exon start="132208" stop="132176"/>
              <exon start="131745" stop="131733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222166" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAACATTTCTTATTCCTCTCTCTTGCATATCTCCGTTTATAGCGTGCACAGCGCAACCGCACGCCGCCGCGGCACTACCATTACCATGAACATCTCAACTCTAAGACTCGATTCCAATCCAATCACTACGGCAACGGCGACTCACCGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTATAGGTTCAATCAGTTCCAGCAGAGGAAGAAGACTGCTTCAATTGTCGTTTGTTCGACAAAGCCTCTTGCCTCGGTAGTGGACCATCAGGGGGTTAATGAGTCAGGACTGAGACGAATTGAGTCACTCAGTCAGGTATCCGGCGTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAACATTTCGACATTGTTGCTCGTTGTCAG : GGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTG : GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG : GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAAT : GATCAGAAACAACAAATTCAAAGAAATAAGAAA : GTAAAAAAAAAAA</gDNA_template>
            <first_frame> N  N  I  S  Y  S  S  L  L  H  I  S  V  Y  S  V  H  S  A  T  A  R  R  R  G  T  T  I  T  M  N  I  S  T  L  R  L  D  S  N  P  I  T  T  A  T  A  T  H  R  N  G  I  L  G  C  N  G  T  Y  S  Y  R  F  N  Q  F  Q  Q  R  K  K  T  A  S  I  V  V  C  S  T  K  P  L  A  S  V  V  D  H  Q  G  V  N  E  S  G  L  R  R  I  E  S  L  S  Q  V  S  G  V  L  G  C  Q  W  G  D  E  G  K  G  K  L  V  D  I  L  A  K  H  F  D  I  V  A  R  C  Q  :  G  G  A  N  A  G  H  T  I  Y  N  S  E  G  K  K  F  A  L  H  L  V  P  S  G  I  L  N  E  E  T  L  C  V  I  G  N  G  V  V  V  H  L  P  G  L  F  K  E  I  D  G  L  E  A  N  G  V  S  C  Q  G  R  I  L  V  S  D  R  A  H  L  L  F  D  F  H  Q  E  I  D  G  L  R  E  A  E  L  A  K  S  F  I  G  T  T  K  R  G  I  G  P  C  Y  S  S  K  V  I  R  N  G  L  R  V  S  D  L  R  H  M  D  T  F  P  Q  K  L  D  L  L  L  S  D  A  A  A  R  F  P  G  F  K  Y  G  P  D  M  L  R  E  E  V  E  R  Y  K  K  F  A  E  R  L  E  P  F  V  T  D  T  V  H  F  M  N  D  A  I  S  Q  K  K  K  I  L  V  E  G  G  Q  A  T  M  L  D  I  D  F  G  T  Y  P  F  V  T  S  S  S  P  S  A  G  G  I  C  T  G  L  G  I  A  P  K  V  V  G  D  L  V  G  V  :  V  K  A  Y  T  T  R  V  G  S  G  P  F  P  T  E  I  M  G  K  G  G  D  L  L  R  F  A  G  Q  E  F  G  T  T  T  G  R  P  R  R  C  G  W  L  D  I  V  A  L  K  F  C  C  Q  I  N  G  F  A  S  L  N  L  T  K  L  D  V  L  S  D  L  P  E  I  Q  L  G  V  T  Y  R  H  P  D  G  S  A  L  H  S  F  P  S  D  L  R  L  L  E  Q  I  K  :  V  E  Y  E  V  L  P  G  W  K  S  D  I  S  S  I  R  K  Y  S  D  L  P  K  A  A  R  E  Y  V  E  R  I  E  E  L  V  G  V  P  I  H  Y  I  G  I  G  P  G  R  D  A  L  I  Y  K  *  F  *  I  F  I  I  I  L  P  E  S  Y  S  S  N  C  W  *  T  L  D  *  A  C  S  N  I  M  N  Y  H  F  D  V  I  A  *   : *  S  E  T  T  N  S  K  K  *  E   : S  K  K  K   </first_frame>
            <second_frame>  I  T  F  L  I  P  L  S  C  I  S  P  F  I  A  C  T  A  Q  P  H  A  A  A  A  L  P  L  P  *  T  S  Q  L  *  D  S  I  P  I  Q  S  L  R  Q  R  R  L  T  G  M  G  S  S  V  A  M  G  P  I  V  I  G  S  I  S  S  S  R  G  R  R  L  L  Q  L  S  F  V  R  Q  S  L  L  P  R  *  W  T  I  R  G  L  M  S  Q  D  *  D  E  L  S  H  S  V  R  Y  P  A  C  W  V  A  N  G  A  M  K  E  R  E  S  S  L  I  Y  W  L  N  I  S  T  L  L  L  V  V  R :   V  E  P  M  L  G  I  L  Y  T  I  L  R  G  R  S  L  L  C  T  L  S  L  L  G  F  S  T  R  K  L  C  V  L  L  V  M  E  L  W  C  I  Y  R  D  F  L  K  K  L  M  V  L  K  L  M  E  F  L  A  K  E  G  S  W  Y  L  I  V  H  T  C  Y  L  I  F  T  K  K  *  M  G  L  E  K  L  S  *  L  N  P  L  L  E  P  P  R  E  A  L  G  H  A  I  Q  A  R  L  L  E  M  A  *  E  *  V  I  *  G  I  W  T  H  S  P  K  S  L  I  F  Y  Y  Q  M  P  L  Q  D  S  Q  A  L  S  M  V  L  T  C  S  G  K  K  W  N  A  T  R  N  L  L  R  G  W  N  P  S  L  Q  I  P  C  T  S  *  M  M  L  Y  L  R  K  R  R  F  W  W  K  V  V  R  Q  Q  C  W  I  *  I  L  E  H  T  L  L  *  L  H  P  V  H  R  L  V  E  S  A  Q  V  L  A  L  L  P  K  L  L  V  I  L  L  V  W :   L  R  H  I  P  Q  E  L  V  L  V  L  F  Q  Q  K  S  W  A  K  V  V  T  F  F  V  L  L  G  R  S  L  A  Q  P  L  D  V  R  V  V  V  V  G  *  T  *  L  R  *  N  S  A  V  K  *  M  D  L  L  L  L  T  L  Q  N  *  T  C  C  Q  I  Y  Q  K  F  N  W  V  L  L  T  G  I  L  M  A  Q  H  Y  I  L  F  P  L  I  F  V  F  L  S  K  *  R :   W  S  M  K  F  C  L  G  G  R  V  I  F  L  P  S  G  S  I  L  T  C  L  R  L  H  A  S  M  *  K  G  *  R  S  L  L  G  Y  L  S  I  T  L  V  *  D  L  V  V  M  P  L  S  T  S  D  F  R  F  L  S  S  Y  C  Q  S  H  I  L  Q  I  V  G  K  P  *  T  K  L  V  V  T  S  *  I  I  I  L  M  L  L  L  N  :  D  Q  K  Q  Q  I  Q  R  N  K  K  :  V  K  K  K  </second_frame>
            <third_frame>   *  H  F  L  F  L  S  L  A  Y  L  R  L  *  R  A  Q  R  N  R  T  P  P  R  H  Y  H  Y  H  E  H  L  N  S  K  T  R  F  Q  S  N  H  Y  G  N  G  D  S  P  E  W  D  P  R  L  Q  W  D  L  *  L  *  V  Q  S  V  P  A  E  E  E  D  C  F  N  C  R  L  F  D  K  A  S  C  L  G  S  G  P  S  G  G  *  *  V  R  T  E  T  N  *  V  T  Q  S  G  I  R  R  V  G  L  P  M  G  R  *  R  K  G  K  A  R  *  Y  T  G  *  T  F  R  H  C  C  S  L  S   : G  W  S  Q  C  W  A  Y  Y  I  Q  F  *  G  E  E  V  C  S  A  P  C  P  F  W  D  S  Q  R  G  N  S  V  C  Y  W  *  W  S  C  G  A  S  T  G  T  F  *  R  N  *  W  S  *  S  *  W  S  F  L  P  R  K  D  L  G  I  *  S  C  T  L  V  I  *  F  S  P  R  N  R  W  A  *  R  S  *  A  S  *  I  L  Y  W  N  H  Q  E  R  H  W  A  M  L  F  K  Q  G  Y  *  K  W  L  K  S  K  *  F  K  A  Y  G  H  I  P  P  K  A  *  S  F  I  I  R  C  R  C  K  I  P  R  L  *  V  W  S  *  H  A  Q  G  R  S  G  T  L  Q  E  I  C  *  E  V  G  T  L  R  Y  R  Y  R  A  L  H  E  *  C  Y  I  S  E  K  E  D  F  G  G  R  W  S  G  N  N  V  G  Y  R  F  W  N  I  P  F  C  D  F  I  Q  S  I  G  W  W  N  L  H  R  S  W  H  C  S  Q  S  C  W  *  S  C  W  C   : G  *  G  I  Y  H  K  S  W  F  W  S  F  S  N  R  N  H  G  Q  R  W  *  P  S  S  F  C  W  A  G  V  W  H  N  H  W  T  S  A  S  L  W  L  A  R  H  S  C  A  E  I  L  L  S  N  K  W  I  C  F  S  *  P  Y  K  T  R  R  A  V  R  S  T  R  N  S  I  G  C  Y  L  Q  A  S  *  W  L  S  I  T  F  F  S  L  *  S  S  S  S  *  A  N  K   : G  G  V  *  S  F  A  W  V  E  E  *  Y  F  F  H  Q  E  V  F  *  L  A  *  G  C  T  R  V  C  R  K  D  R  G  A  C  W  G  T  Y  P  L  H  W  Y  R  T  W  S  *  C  P  Y  L  Q  V  I  L  D  F  Y  H  H  I  A  R  V  I  F  F  K  L  L  V  N  L  R  L  S  L  *  *  H  H  E  L  S  F  *  C  Y  C  L  M :   I  R  N  N  K  F  K  E  I  R  K :   *  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139799" stop="139386"/>
                    <exon start="138905" stop="138213"/>
                    <exon start="137903" stop="137592"/>
                    <exon start="137178" stop="137008"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1587</number_coding_nucleotides>
                  <number_encoded_amino_acids>529</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNISYSSLLHISVYSVHSATARRRGTTITMNISTLRLDSNPITTATATHRNGILGCNGTYSYRFNQFQQRKKTASIVVCSTKPLASVVDHQGVNESGLRRIESLSQVSGVLGCQWGDEGKGKLVDILAKHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEETLCVIGNGVVVHLPGLFKEIDGLEANGVSCQGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGLRVSDLRHMDTFPQKLDLLLSDAAARFPGFKYGPDMLREEVERYKKFAERLEPFVTDTVHFMNDAISQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPKVVGDLVGVVKAYTTRVGSGPFPTEIMGKGGDLLRFAGQEFGTTTGRPRRCGWLDIVALKFCCQINGFASLNLTKLDVLSDLPEIQLGVTYRHPDGSALHSFPSDLRLLEQIKVEYEVLPGWKSDISSIRKYSDLPKAAREYVERIEELVGVPIHYIGIGPGRDALIYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="138960" e_stop="138213"/>
            <exon e_start="137903" e_stop="137592"/>
            <exon e_start="137178" e_stop="136836"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="0.961"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="138960" e_stop="138213" e_length="748"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="138212" i_stop="137904" i_length="309"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="137903" e_stop="137592" e_length="312"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="137591" i_stop="137179" i_length="413"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="137178" e_stop="136836" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138960" stop="138317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138960" stop="138663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138956" stop="138241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138725" stop="138213"/>
              <exon start="137903" stop="137654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138725" stop="138213"/>
              <exon start="137903" stop="137805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138714" stop="138213"/>
              <exon start="137903" stop="137691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138588" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="137088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588852" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138578" stop="138213"/>
              <exon start="137903" stop="137658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480880" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138550" stop="138213"/>
              <exon start="137903" stop="137592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138326" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605780" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138308" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539416" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138292" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450579" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138254" stop="138213"/>
              <exon start="137903" stop="137592"/>
              <exon start="137178" stop="136964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474825" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137828" stop="137592"/>
              <exon start="137178" stop="136837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284434" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137149" stop="136877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217414" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATAAACTTGTTAGCTATGATAGCTAAGCTTTTCAATAACGTTTCTTGCTGTCAGGGTGGAGCCAATGCTGGGCATACTATATACAATTCTGAGGGGAAGAAGTTTGCTCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACTCTGTGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATTGATGGTCTTGAAGCTAATGGAGTTTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACACTTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCCTTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAATGGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTATTATCAGATGCCGCTGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAAGAAGTGGAACGCTACAAGAAATTTGCTGAGAGGTTGGAACCCTTCGTTACAGATACCGTGCACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCAACAATGTTGGATATAGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCTGGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAAAGTTGTTGGTGATCTTGTTGGTGTG : GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAAGGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACCACTGGACGTCCGCGTCGTTGTGGTTGGCTAGACATAGTTGCGCTGAAATTCTGCTGTCAAATAAATGGATTTGCTTCTCTTAACCTTACAAAACTAGACGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTTACTTACAGGCATCCTGATGGCTCAGCATTACATTCTTTTCCCTCTGATCTTCGTCTTCTTGAGCAAATAAAG : GTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATCAGGAAGTATTCTGACTTGCCTAAGGCTGCACGCGAGTATGTAGAAAGGATAGAGGAGCTTGTTGGGGTACCTATCCATTACATTGGTATAGGACCTGGTCGTGATGCCCTTATCTACAAGTGATTTTAGATTTTTATCATCATATTGCCAGAGTCATATTCTTCAAATTGTTGGTAAACCTTAGACTAAGCTTGTAGTAACATCATGAATTATCATTTTGATGTTATTGCTTAATGTAAAAATTATGTCTCTGTTGTCTTTAAAGCTAGAAATTTTGTTAGACCTCCCAAGGAAA</gDNA_template>
            <first_frame> D  K  L  V  S  Y  D  S  *  A  F  Q  *  R  F  L  L  S  G  W  S  Q  C  W  A  Y  Y  I  Q  F  *  G  E  E  V  C  S  A  P  C  P  F  W  D  S  Q  R  G  N  S  V  C  Y  W  *  W  S  C  G  A  S  T  G  T  F  *  R  N  *  W  S  *  S  *  W  S  F  L  P  R  K  D  L  G  I  *  S  C  T  L  V  I  *  F  S  P  R  N  R  W  A  *  R  S  *  A  S  *  I  L  Y  W  N  H  Q  E  R  H  W  A  M  L  F  K  Q  G  Y  *  K  W  L  K  S  K  *  F  K  A  Y  G  H  I  P  P  K  A  *  S  F  I  I  R  C  R  C  K  I  P  R  L  *  V  W  S  *  H  A  Q  G  R  S  G  T  L  Q  E  I  C  *  E  V  G  T  L  R  Y  R  Y  R  A  L  H  E  *  C  Y  I  S  E  K  E  D  F  G  G  R  W  S  G  N  N  V  G  Y  R  F  W  N  I  P  F  C  D  F  I  Q  S  I  G  W  W  N  L  H  R  S  W  H  C  S  Q  S  C  W  *  S  C  W  C   : G  *  G  I  Y  H  K  S  W  F  W  S  F  S  N  R  N  H  G  Q  R  W  *  P  S  S  F  C  W  A  G  V  W  H  N  H  W  T  S  A  S  L  W  L  A  R  H  S  C  A  E  I  L  L  S  N  K  W  I  C  F  S  *  P  Y  K  T  R  R  A  V  R  S  T  R  N  S  I  G  C  Y  L  Q  A  S  *  W  L  S  I  T  F  F  S  L  *  S  S  S  S  *  A  N  K   : G  G  V  *  S  F  A  W  V  E  E  *  Y  F  F  H  Q  E  V  F  *  L  A  *  G  C  T  R  V  C  R  K  D  R  G  A  C  W  G  T  Y  P  L  H  W  Y  R  T  W  S  *  C  P  Y  L  Q  V  I  L  D  F  Y  H  H  I  A  R  V  I  F  F  K  L  L  V  N  L  R  L  S  L  *  *  H  H  E  L  S  F  *  C  Y  C  L  M  *  K  L  C  L  C  C  L  *  S  *  K  F  C  *  T  S  Q  G   </first_frame>
            <second_frame>  I  N  L  L  A  M  I  A  K  L  F  N  N  V  S  C  C  Q  G  G  A  N  A  G  H  T  I  Y  N  S  E  G  K  K  F  A  L  H  L  V  P  S  G  I  L  N  E  E  T  L  C  V  I  G  N  G  V  V  V  H  L  P  G  L  F  K  E  I  D  G  L  E  A  N  G  V  S  C  Q  G  R  I  L  V  S  D  R  A  H  L  L  F  D  F  H  Q  E  I  D  G  L  R  E  A  E  L  A  K  S  F  I  G  T  T  K  R  G  I  G  P  C  Y  S  S  K  V  I  R  N  G  L  R  V  S  D  L  R  H  M  D  T  F  P  Q  K  L  D  L  L  L  S  D  A  A  A  R  F  P  G  F  K  Y  G  P  D  M  L  R  E  E  V  E  R  Y  K  K  F  A  E  R  L  E  P  F  V  T  D  T  V  H  F  M  N  D  A  I  S  Q  K  K  K  I  L  V  E  G  G  Q  A  T  M  L  D  I  D  F  G  T  Y  P  F  V  T  S  S  S  P  S  A  G  G  I  C  T  G  L  G  I  A  P  K  V  V  G  D  L  V  G  V  :  V  K  A  Y  T  T  R  V  G  S  G  P  F  P  T  E  I  M  G  K  G  G  D  L  L  R  F  A  G  Q  E  F  G  T  T  T  G  R  P  R  R  C  G  W  L  D  I  V  A  L  K  F  C  C  Q  I  N  G  F  A  S  L  N  L  T  K  L  D  V  L  S  D  L  P  E  I  Q  L  G  V  T  Y  R  H  P  D  G  S  A  L  H  S  F  P  S  D  L  R  L  L  E  Q  I  K  :  V  E  Y  E  V  L  P  G  W  K  S  D  I  S  S  I  R  K  Y  S  D  L  P  K  A  A  R  E  Y  V  E  R  I  E  E  L  V  G  V  P  I  H  Y  I  G  I  G  P  G  R  D  A  L  I  Y  K  *  F  *  I  F  I  I  I  L  P  E  S  Y  S  S  N  C  W  *  T  L  D  *  A  C  S  N  I  M  N  Y  H  F  D  V  I  A  *  C  K  N  Y  V  S  V  V  F  K  A  R  N  F  V  R  P  P  K  E  </second_frame>
            <third_frame>   *  T  C  *  L  *  *  L  S  F  S  I  T  F  L  A  V  R  V  E  P  M  L  G  I  L  Y  T  I  L  R  G  R  S  L  L  C  T  L  S  L  L  G  F  S  T  R  K  L  C  V  L  L  V  M  E  L  W  C  I  Y  R  D  F  L  K  K  L  M  V  L  K  L  M  E  F  L  A  K  E  G  S  W  Y  L  I  V  H  T  C  Y  L  I  F  T  K  K  *  M  G  L  E  K  L  S  *  L  N  P  L  L  E  P  P  R  E  A  L  G  H  A  I  Q  A  R  L  L  E  M  A  *  E  *  V  I  *  G  I  W  T  H  S  P  K  S  L  I  F  Y  Y  Q  M  P  L  Q  D  S  Q  A  L  S  M  V  L  T  C  S  G  K  K  W  N  A  T  R  N  L  L  R  G  W  N  P  S  L  Q  I  P  C  T  S  *  M  M  L  Y  L  R  K  R  R  F  W  W  K  V  V  R  Q  Q  C  W  I  *  I  L  E  H  T  L  L  *  L  H  P  V  H  R  L  V  E  S  A  Q  V  L  A  L  L  P  K  L  L  V  I  L  L  V  W :   L  R  H  I  P  Q  E  L  V  L  V  L  F  Q  Q  K  S  W  A  K  V  V  T  F  F  V  L  L  G  R  S  L  A  Q  P  L  D  V  R  V  V  V  V  G  *  T  *  L  R  *  N  S  A  V  K  *  M  D  L  L  L  L  T  L  Q  N  *  T  C  C  Q  I  Y  Q  K  F  N  W  V  L  L  T  G  I  L  M  A  Q  H  Y  I  L  F  P  L  I  F  V  F  L  S  K  *  R :   W  S  M  K  F  C  L  G  G  R  V  I  F  L  P  S  G  S  I  L  T  C  L  R  L  H  A  S  M  *  K  G  *  R  S  L  L  G  Y  L  S  I  T  L  V  *  D  L  V  V  M  P  L  S  T  S  D  F  R  F  L  S  S  Y  C  Q  S  H  I  L  Q  I  V  G  K  P  *  T  K  L  V  V  T  S  *  I  I  I  L  M  L  L  L  N  V  K  I  M  S  L  L  S  L  K  L  E  I  L  L  D  L  P  R  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="138959" stop="138213"/>
                    <exon start="137903" stop="137592"/>
                    <exon start="137178" stop="137008"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1227</number_coding_nucleotides>
                  <number_encoded_amino_acids>409</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INLLAMIAKLFNNVSCCQGGANAGHTIYNSEGKKFALHLVPSGILNEETLCVIGNGVVVHLPGLFKEIDGLEANGVSCQGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGLRVSDLRHMDTFPQKLDLLLSDAAARFPGFKYGPDMLREEVERYKKFAERLEPFVTDTVHFMNDAISQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPKVVGDLVGVVKAYTTRVGSGPFPTEIMGKGGDLLRFAGQEFGTTTGRPRRCGWLDIVALKFCCQINGFASLNLTKLDVLSDLPEIQLGVTYRHPDGSALHSFPSDLRLLEQIKVEYEVLPGWKSDISSIRKYSDLPKAAREYVERIEELVGVPIHYIGIGPGRDALIYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="143291" PGL_stop="139849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="143291" e_stop="142619"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="143291" e_stop="142619" e_length="673"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143291" stop="142686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143286" stop="142679"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143278" stop="142679"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712073" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143273" stop="142793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143271" stop="142698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143271" stop="142700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143270" stop="142703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143264" stop="142666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143248" stop="142692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143210" stop="142778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143198" stop="142796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143187" stop="142694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143179" stop="142655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143175" stop="142689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143153" stop="142619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403493" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143134" stop="142672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216826" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143123" stop="142667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143102" stop="142658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143094" stop="142873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143080" stop="142660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143040" stop="142658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142907" stop="142657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287695" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACACTTTCGTTCATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAATGCATATTGTTCGCTTGTAATTGTGTTTAATAGTATGTTATG</gDNA_template>
            <first_frame> H  T  F  V  H  L  S  N  D  A  V  R  E  T  L  S  D  R  R  R  R  A  T  S  P  C  *  F  G  P  P  H  Q  R  R  T  R  A  E  S  I  H  H  C  G  P  P  G  S  T  *  R  I  P  I  Q  P  C  S  T  T  A  W  T  V  P  *  M  G  G  L  G  T  P  L  L  H  H  Q  L  L  H  H  R  H  P  G  C  G  T  Q  C  Q  A  R  S  H  P  *  N  L  G  P  P  R  S  P  K  T  P  R  T  *  I  R  R  C  G  I  I  C  G  S  A  R  V  W  F  *  I  P  P  F  F  G  L  S  N  *  G  F  D  K  W  G  *  F  S  L  F  I  V  C  V  F  R  K  L  G  N  K  C  *  N  F  *  A  *  T  *  S  L  S  L  L  F  C  S  V  L  M  K  R  W  M  L  *  T  Q  Q  Y  D  N  C  E  M  T  M  V  D  N  I  I  L  F  Q  F  H  S  G  M  H  I  V  R  L  *  L  C  L  I  V  C  Y  </first_frame>
            <second_frame>  T  L  S  F  I  C  P  T  M  P  S  V  K  P  L  A  T  A  A  G  A  L  R  A  R  V  S  S  G  L  R  T  R  G  G  H  G  P  N  P  F  T  T  A  G  H  Q  D  R  P  N  G  Y  L  F  N  R  V  P  P  P  P  G  Q  S  R  K  W  E  D  W  E  L  P  C  Y  I  T  S  F  F  T  I  V  I  L  G  V  G  L  N  A  K  P  D  L  T  L  E  T  W  A  H  Q  E  A  L  K  R  L  E  L  E  S  A  D  A  E  *  Y  V  D  L  L  G  Y  G  F  E  F  R  P  F  L  D  C  Q  I  R  A  S  I  N  G  D  S  F  P  C  L  *  F  V  F  L  E  S  W  E  I  N  V  K  T  F  K  R  R  L  E  V  *  A  Y  C  F  V  Q  F  *  *  N  V  G  C  C  K  R  S  N  M  I  I  V  K  *  Q  W  L  T  I  L  F  F  F  S  F  T  R  E  C  I  L  F  A  C  N  C  V  *  *  Y  V  M </second_frame>
            <third_frame>   H  F  R  S  S  V  Q  R  C  R  P  *  N  P  *  R  P  P  P  A  R  Y  E  P  V  L  V  R  A  S  A  P  E  E  D  T  G  R  I  H  S  P  L  R  A  T  R  I  D  L  T  D  T  Y  S  T  V  F  H  H  R  L  D  S  P  V  N  G  R  I  G  N  S  L  A  T  S  P  A  S  S  P  S  S  S  W  V  W  D  S  M  P  S  P  I  S  P  L  K  L  G  P  T  K  K  P  *  N  A  S  N  L  N  P  P  M  R  N  N  M  W  I  C  S  G  M  V  L  N  S  A  L  F  W  I  V  K  L  G  L  R  *  M  G  I  V  F  L  V  Y  S  L  C  F  *  K  V  G  K  *  M  L  K  L  L  S  V  D  L  K  F  E  L  T  V  L  F  S  S  N  E  T  L  D  A  V  N  A  A  I  *  *  L  *  N  D  N  G  *  Q  Y  Y  S  F  S  V  S  L  G  N  A  Y  C  S  L  V  I  V  F  N  S  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143290" stop="142934"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLSFICPTMPSVKPLATAAGALRARVSSGLRTRGGHGPNPFTTAGHQDRPNGYLFNRVPPPPGQSRKWEDWELPCYITSFFTIVILGVGLNAKPDLTLETWAHQEALKRLELESADAE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143244" stop="142969"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RPPPARYEPVLVRASAPEEDTGRIHSPLRATRIDLTDTYSTVFHHRLDSPVNGRIGNSLATSPASSPSSSWVWDSMPSPISPLKLGPTKKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="143291" e_stop="142661"/>
            <exon e_start="142431" e_stop="142390"/>
            <exon e_start="141292" e_stop="141238"/>
            <exon e_start="140695" e_stop="140664"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.995"/>
          <exon-intron don_prob="0.000" acc_prob="0.821" e_score="0.571"/>
          <exon-intron don_prob="0.347" acc_prob="0.960" e_score="0.545"/>
          <exon-only e_score="0.469"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="143291" e_stop="142661" e_length="631"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="142660" i_stop="142432" i_length="229"/>
          </intron>
          <exon e_serial="2" e_score="0.571">
            <gDNA_exon_boundary e_start="142431" e_stop="142390" e_length="42"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.821">
            <gDNA_intron_boundary i_start="142389" i_stop="141293" i_length="1097"/>
          </intron>
          <exon e_serial="3" e_score="0.545">
            <gDNA_exon_boundary e_start="141292" e_stop="141238" e_length="55"/>
          </exon>
          <intron i_serial="3" don_prob="0.347" acc_prob="0.960">
            <gDNA_intron_boundary i_start="141237" i_stop="140696" i_length="542"/>
          </intron>
          <exon e_serial="4" e_score="0.469">
            <gDNA_exon_boundary e_start="140695" e_stop="140664" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143291" stop="142686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143286" stop="142679"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143278" stop="142679"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143273" stop="142793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143271" stop="142698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143271" stop="142700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143270" stop="142703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143264" stop="142666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143248" stop="142692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143210" stop="142778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143198" stop="142796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143187" stop="142694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143175" stop="142689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143134" stop="142672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216826" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143123" stop="142667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143108" stop="142661"/>
              <exon start="142431" stop="142390"/>
              <exon start="141292" stop="141238"/>
              <exon start="140695" stop="140664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143094" stop="142873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351800" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACACTTTCGTTCATCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAAATGACAATGGTTGACAATATTATTCTTTTTCAGTTTCACTCGGGAA : AACTAGGCAAGAAAACTACTTTGAGAAGGATGAATTATGCTT : AATGAATTGATGGACGAGGCAGAGATGGTTTATGAGGATCTGGAGAAAAATGAGT : GTTAACCAGGCATGAAATATGTAATACACAAA</gDNA_template>
            <first_frame> H  T  F  V  H  L  S  N  D  A  V  R  E  T  L  S  D  R  R  R  R  A  T  S  P  C  *  F  G  P  P  H  Q  R  R  T  R  A  E  S  I  H  H  C  G  P  P  G  S  T  *  R  I  P  I  Q  P  C  S  T  T  A  W  T  V  P  *  M  G  G  L  G  T  P  L  L  H  H  Q  L  L  H  H  R  H  P  G  C  G  T  Q  C  Q  A  R  S  H  P  *  N  L  G  P  P  R  S  P  K  T  P  R  T  *  I  R  R  C  G  I  I  C  G  S  A  R  V  W  F  *  I  P  P  F  F  G  L  S  N  *  G  F  D  K  W  G  *  F  S  L  F  I  V  C  V  F  R  K  L  G  N  K  C  *  N  F  *  A  *  T  *  S  L  S  L  L  F  C  S  V  L  M  K  R  W  M  L  *  T  Q  Q  Y  D  N  C  E  M  T  M  V  D  N  I  I  L  F  Q  F  H  S  G   : K  L  G  K  K  T  T  L  R  R  M  N  Y  A   : *  *  I  D  G  R  G  R  D  G  L  *  G  S  G  E  K  *  V :   L  T  R  H  E  I  C  N  T  Q  </first_frame>
            <second_frame>  T  L  S  F  I  C  P  T  M  P  S  V  K  P  L  A  T  A  A  G  A  L  R  A  R  V  S  S  G  L  R  T  R  G  G  H  G  P  N  P  F  T  T  A  G  H  Q  D  R  P  N  G  Y  L  F  N  R  V  P  P  P  P  G  Q  S  R  K  W  E  D  W  E  L  P  C  Y  I  T  S  F  F  T  I  V  I  L  G  V  G  L  N  A  K  P  D  L  T  L  E  T  W  A  H  Q  E  A  L  K  R  L  E  L  E  S  A  D  A  E  *  Y  V  D  L  L  G  Y  G  F  E  F  R  P  F  L  D  C  Q  I  R  A  S  I  N  G  D  S  F  P  C  L  *  F  V  F  L  E  S  W  E  I  N  V  K  T  F  K  R  R  L  E  V  *  A  Y  C  F  V  Q  F  *  *  N  V  G  C  C  K  R  S  N  M  I  I  V  K  *  Q  W  L  T  I  L  F  F  F  S  F  T  R  E  :  N  *  A  R  K  L  L  *  E  G  *  I  M  L  :  N  E  L  M  D  E  A  E  M  V  Y  E  D  L  E  K  N  E   : C  *  P  G  M  K  Y  V  I  H  K </second_frame>
            <third_frame>   H  F  R  S  S  V  Q  R  C  R  P  *  N  P  *  R  P  P  P  A  R  Y  E  P  V  L  V  R  A  S  A  P  E  E  D  T  G  R  I  H  S  P  L  R  A  T  R  I  D  L  T  D  T  Y  S  T  V  F  H  H  R  L  D  S  P  V  N  G  R  I  G  N  S  L  A  T  S  P  A  S  S  P  S  S  S  W  V  W  D  S  M  P  S  P  I  S  P  L  K  L  G  P  T  K  K  P  *  N  A  S  N  L  N  P  P  M  R  N  N  M  W  I  C  S  G  M  V  L  N  S  A  L  F  W  I  V  K  L  G  L  R  *  M  G  I  V  F  L  V  Y  S  L  C  F  *  K  V  G  K  *  M  L  K  L  L  S  V  D  L  K  F  E  L  T  V  L  F  S  S  N  E  T  L  D  A  V  N  A  A  I  *  *  L  *  N  D  N  G  *  Q  Y  Y  S  F  S  V  S  L  G  K :   T  R  Q  E  N  Y  F  E  K  D  E  L  C  L :   M  N  *  W  T  R  Q  R  W  F  M  R  I  W  R  K  M  S  :  V  N  Q  A  *  N  M  *  Y  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143290" stop="142934"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLSFICPTMPSVKPLATAAGALRARVSSGLRTRGGHGPNPFTTAGHQDRPNGYLFNRVPPPPGQSRKWEDWELPCYITSFFTIVILGVGLNAKPDLTLETWAHQEALKRLELESADAE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143244" stop="142969"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RPPPARYEPVLVRASAPEEDTGRIHSPLRATRIDLTDTYSTVFHHRLDSPVNGRIGNSLATSPASSPSSSWVWDSMPSPISPLKLGPTKKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="143277" e_stop="142707"/>
            <exon e_start="139911" e_stop="139849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.843" e_score="1.000"/>
          <exon-only e_score="0.571"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="143277" e_stop="142707" e_length="571"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.843">
            <gDNA_intron_boundary i_start="142706" i_stop="139912" i_length="2795"/>
          </intron>
          <exon e_serial="2" e_score="0.571">
            <gDNA_exon_boundary e_start="139911" e_stop="139849" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143277" stop="142767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143274" stop="142720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143273" stop="142793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143262" stop="142707"/>
              <exon start="139911" stop="139849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142806"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688579" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143238" stop="142807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143210" stop="142778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143198" stop="142796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143094" stop="142873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351800" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTGTCCAACGATGCCGTCCGTGAAACCCTTAGCGACCGCCGCCGGCGCGCTACGAGCCCGTGTTAGTTCGGGCCTCCGCACCAGAGGAGGACACGGGCCGAATCCATTCACCACTGCGGGCCACCAGGATCGACCTAACGGATACCTATTCAACCGTGTTCCACCACCGCCTGGACAGTCCCGTAAATGGGAGGATTGGGAACTCCCTTGCTACATCACCAGCTTCTTCACCATCGTCATCCTGGGTGTGGGACTCAATGCCAAGCCCGATCTCACCCTTGAAACTTGGGCCCACCAAGAAGCCCTAAAACGCCTCGAACTTGAATCCGCCGATGCGGAATAATATGTGGATCTGCTCGGGTATGGTTTTGAATTCCGCCCTTTTTTGGATTGTCAAATTAGGGCTTCGATAAATGGGGATAGTTTTCCTTGTTTATAGTTTGTGTTTTTAGAAAGTTGGGAAATAAATGTTAAAACTTTTAAGCGTAGACTTGAAGTTTGAGCTTACTGTTTTGTTCAGTTCTAATGAAACGTTGGATGCTGTAAACGCAGCAATATGATAATTGTGAA : GATAATAAAGTTGTTCAATAAAACTAGAAAAAGGAAACAAAGAGAGAAACGAGAAGATATGAA</gDNA_template>
            <first_frame> S  V  Q  R  C  R  P  *  N  P  *  R  P  P  P  A  R  Y  E  P  V  L  V  R  A  S  A  P  E  E  D  T  G  R  I  H  S  P  L  R  A  T  R  I  D  L  T  D  T  Y  S  T  V  F  H  H  R  L  D  S  P  V  N  G  R  I  G  N  S  L  A  T  S  P  A  S  S  P  S  S  S  W  V  W  D  S  M  P  S  P  I  S  P  L  K  L  G  P  T  K  K  P  *  N  A  S  N  L  N  P  P  M  R  N  N  M  W  I  C  S  G  M  V  L  N  S  A  L  F  W  I  V  K  L  G  L  R  *  M  G  I  V  F  L  V  Y  S  L  C  F  *  K  V  G  K  *  M  L  K  L  L  S  V  D  L  K  F  E  L  T  V  L  F  S  S  N  E  T  L  D  A  V  N  A  A  I  *  *  L  *   : R  *  *  S  C  S  I  K  L  E  K  G  N  K  E  R  N  E  K  I  *  </first_frame>
            <second_frame>  L  S  N  D  A  V  R  E  T  L  S  D  R  R  R  R  A  T  S  P  C  *  F  G  P  P  H  Q  R  R  T  R  A  E  S  I  H  H  C  G  P  P  G  S  T  *  R  I  P  I  Q  P  C  S  T  T  A  W  T  V  P  *  M  G  G  L  G  T  P  L  L  H  H  Q  L  L  H  H  R  H  P  G  C  G  T  Q  C  Q  A  R  S  H  P  *  N  L  G  P  P  R  S  P  K  T  P  R  T  *  I  R  R  C  G  I  I  C  G  S  A  R  V  W  F  *  I  P  P  F  F  G  L  S  N  *  G  F  D  K  W  G  *  F  S  L  F  I  V  C  V  F  R  K  L  G  N  K  C  *  N  F  *  A  *  T  *  S  L  S  L  L  F  C  S  V  L  M  K  R  W  M  L  *  T  Q  Q  Y  D  N  C  E  :  D  N  K  V  V  Q  *  N  *  K  K  E  T  K  R  E  T  R  R  Y  E </second_frame>
            <third_frame>   C  P  T  M  P  S  V  K  P  L  A  T  A  A  G  A  L  R  A  R  V  S  S  G  L  R  T  R  G  G  H  G  P  N  P  F  T  T  A  G  H  Q  D  R  P  N  G  Y  L  F  N  R  V  P  P  P  P  G  Q  S  R  K  W  E  D  W  E  L  P  C  Y  I  T  S  F  F  T  I  V  I  L  G  V  G  L  N  A  K  P  D  L  T  L  E  T  W  A  H  Q  E  A  L  K  R  L  E  L  E  S  A  D  A  E  *  Y  V  D  L  L  G  Y  G  F  E  F  R  P  F  L  D  C  Q  I  R  A  S  I  N  G  D  S  F  P  C  L  *  F  V  F  L  E  S  W  E  I  N  V  K  T  F  K  R  R  L  E  V  *  A  Y  C  F  V  Q  F  *  *  N  V  G  C  C  K  R  S  N  M  I  I  V  K :   I  I  K  L  F  N  K  T  R  K  R  K  Q  R  E  K  R  E  D  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143275" stop="142934"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPTMPSVKPLATAAGALRARVSSGLRTRGGHGPNPFTTAGHQDRPNGYLFNRVPPPPGQSRKWEDWELPCYITSFFTIVILGVGLNAKPDLTLETWAHQEALKRLELESADAE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143244" stop="142969"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RPPPARYEPVLVRASAPEEDTGRIHSPLRATRIDLTDTYSTVFHHRLDSPVNGRIGNSLATSPASSPSSSWVWDSMPSPISPLKLGPTKKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="142091" PGL_stop="143271"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="142675" e_stop="143271"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="142675" e_stop="143271" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142675" stop="143271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142691" stop="142908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293050" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAAAAGAATAATATTGTCAACCATTGTCATTTCACAATTATCATATTGCTGCGTTTACAGCATCCAACGTTTCATTAGAACTGAACAAAACAGTAAGCTCAAACTTCAAGTCTACGCTTAAAAGTTTTAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAAAACCATACCCGAGCAGATCCACATATTATTCCGCATCGGCGGATTCAAGTTCGAGGCGTTTTAGGGCTTCTTGGTGGGCCCAAGTTTCAAGGGTGAGATCGGGCTTGGCATTGAGTCCCACACCCAGGATGACGATGGTGAAGAAGCTGGTGATGTAGCAAGGGAGTTCCCAATCCTCCCATTTACGGGACTGTCCAGGCGGTGGTGGAACACGGTTGAATAGGTATCCGTTAGGTCGATCCTGGTGGCCCGCAGTGGTGAATGGATTCGGCCCGTGTCCTCCTCTGGTGCGGAGGCCCGAACTAACACGGGCTCGTAGCGCGCCGGCGGCGGTCGCTAAGGGTTTCACGGACGGCATCGTTG</gDNA_template>
            <first_frame> *  K  R  I  I  L  S  T  I  V  I  S  Q  L  S  Y  C  C  V  Y  S  I  Q  R  F  I  R  T  E  Q  N  S  K  L  K  L  Q  V  Y  A  *  K  F  *  H  L  F  P  N  F  L  K  T  Q  T  I  N  K  E  N  Y  P  H  L  S  K  P  *  F  D  N  P  K  K  G  G  I  Q  N  H  T  R  A  D  P  H  I  I  P  H  R  R  I  Q  V  R  G  V  L  G  L  L  G  G  P  K  F  Q  G  *  D  R  A  W  H  *  V  P  H  P  G  *  R  W  *  R  S  W  *  C  S  K  G  V  P  N  P  P  I  Y  G  T  V  Q  A  V  V  E  H  G  *  I  G  I  R  *  V  D  P  G  G  P  Q  W  *  M  D  S  A  R  V  L  L  W  C  G  G  P  N  *  H  G  L  V  A  R  R  R  R  S  L  R  V  S  R  T  A  S  L </first_frame>
            <second_frame>  E  K  E  *  Y  C  Q  P  L  S  F  H  N  Y  H  I  A  A  F  T  A  S  N  V  S  L  E  L  N  K  T  V  S  S  N  F  K  S  T  L  K  S  F  N  I  Y  F  P  T  F  *  K  H  K  L  *  T  R  K  T  I  P  I  Y  R  S  P  N  L  T  I  Q  K  R  A  E  F  K  T  I  P  E  Q  I  H  I  L  F  R  I  G  G  F  K  F  E  A  F  *  G  F  L  V  G  P  S  F  K  G  E  I  G  L  G  I  E  S  H  T  Q  D  D  D  G  E  E  A  G  D  V  A  R  E  F  P  I  L  P  F  T  G  L  S  R  R  W  W  N  T  V  E  *  V  S  V  R  S  I  L  V  A  R  S  G  E  W  I  R  P  V  S  S  S  G  A  E  A  R  T  N  T  G  S  *  R  A  G  G  G  R  *  G  F  H  G  R  H  R   </second_frame>
            <third_frame>   K  K  N  N  I  V  N  H  C  H  F  T  I  I  I  L  L  R  L  Q  H  P  T  F  H  *  N  *  T  K  Q  *  A  Q  T  S  S  L  R  L  K  V  L  T  F  I  S  Q  L  S  K  N  T  N  Y  K  Q  G  K  L  S  P  F  I  E  A  L  I  *  Q  S  K  K  G  R  N  S  K  P  Y  P  S  R  S  T  Y  Y  S  A  S  A  D  S  S  S  R  R  F  R  A  S  W  W  A  Q  V  S  R  V  R  S  G  L  A  L  S  P  T  P  R  M  T  M  V  K  K  L  V  M  *  Q  G  S  S  Q  S  S  H  L  R  D  C  P  G  G  G  G  T  R  L  N  R  Y  P  L  G  R  S  W  W  P  A  V  V  N  G  F  G  P  C  P  P  L  V  R  R  P  E  L  T  R  A  R  S  A  P  A  A  V  A  K  G  F  T  D  G  I  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143067" stop="143270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGSSQSSHLRDCPGGGGTRLNRYPLGRSWWPAVVNGFGPCPPLVRRPELTRARSAPAAVAKGFTDGIV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="142091" e_stop="142107"/>
            <exon e_start="142442" e_stop="142453"/>
            <exon e_start="142700" e_stop="143110"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.141" acc_prob="0.874" e_score="0.588"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.588">
            <gDNA_exon_boundary e_start="142091" e_stop="142107" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.141" acc_prob="0.874">
            <gDNA_intron_boundary i_start="142108" i_stop="142441" i_length="334"/>
          </intron>
          <exon e_serial="2" e_score="0.750">
            <gDNA_exon_boundary e_start="142442" e_stop="142453" e_length="12"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="142454" i_stop="142699" i_length="246"/>
          </intron>
          <exon e_serial="3" e_score="0.917">
            <gDNA_exon_boundary e_start="142700" e_stop="143110" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142091" stop="142107"/>
              <exon start="142442" stop="142453"/>
              <exon start="142700" stop="143110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457397" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTCTCAAGTAACAT : GTTTTCTTTTTG : TTGTCATTTCACAATTATCATATTGCTGCGTTTACAGCATCCAACGTTTCATTAGAACTGAACAAAACAGTAAGCTCAAACTTCAAGTCTACGCTTAAAAGTTTTAACATTTATTTCCCAACTTTCTAAAAACACAAACTATAAACAAGGAAAACTATCCCCATTTATCGAAGCCCTAATTTGACAATCCAAAAAAGGGCGGAATTCAAAACCATACCCGAGCAGATCCACATATTATTCCGCATCGGCGGATTCAAGTTCGAGGCGTTTTAGGGCTTCTTGGTGGGCCCAAGTTTCAAGGGTGAGATCGGGCTTGGCATTGAGTCCCACACCCAGGATGACGATGGTGAAGAAGCTGGTGATGTAGCAAGGGAGTTCCCAATCCTCCCATTTACGGGACTGTCCAGGCGG</gDNA_template>
            <first_frame> Q  F  S  S  N  M :   F  S  F  C :   C  H  F  T  I  I  I  L  L  R  L  Q  H  P  T  F  H  *  N  *  T  K  Q  *  A  Q  T  S  S  L  R  L  K  V  L  T  F  I  S  Q  L  S  K  N  T  N  Y  K  Q  G  K  L  S  P  F  I  E  A  L  I  *  Q  S  K  K  G  R  N  S  K  P  Y  P  S  R  S  T  Y  Y  S  A  S  A  D  S  S  S  R  R  F  R  A  S  W  W  A  Q  V  S  R  V  R  S  G  L  A  L  S  P  T  P  R  M  T  M  V  K  K  L  V  M  *  Q  G  S  S  Q  S  S  H  L  R  D  C  P  G   </first_frame>
            <second_frame>  N  S  Q  V  T   : C  F  L  F   : V  V  I  S  Q  L  S  Y  C  C  V  Y  S  I  Q  R  F  I  R  T  E  Q  N  S  K  L  K  L  Q  V  Y  A  *  K  F  *  H  L  F  P  N  F  L  K  T  Q  T  I  N  K  E  N  Y  P  H  L  S  K  P  *  F  D  N  P  K  K  G  G  I  Q  N  H  T  R  A  D  P  H  I  I  P  H  R  R  I  Q  V  R  G  V  L  G  L  L  G  G  P  K  F  Q  G  *  D  R  A  W  H  *  V  P  H  P  G  *  R  W  *  R  S  W  *  C  S  K  G  V  P  N  P  P  I  Y  G  T  V  Q  A  </second_frame>
            <third_frame>   I  L  K  *  H  :  V  F  F  L  :  L  S  F  H  N  Y  H  I  A  A  F  T  A  S  N  V  S  L  E  L  N  K  T  V  S  S  N  F  K  S  T  L  K  S  F  N  I  Y  F  P  T  F  *  K  H  K  L  *  T  R  K  T  I  P  I  Y  R  S  P  N  L  T  I  Q  K  R  A  E  F  K  T  I  P  E  Q  I  H  I  L  F  R  I  G  G  F  K  F  E  A  F  *  G  F  L  V  G  P  S  F  K  G  E  I  G  L  G  I  E  S  H  T  Q  D  D  D  G  E  E  A  G  D  V  A  R  E  F  P  I  L  P  F  T  G  L  S  R  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="144732" PGL_stop="144188"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="144732" e_stop="144188"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="144732" e_stop="144188" e_length="545"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144732" stop="144188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365448" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAAATTTATCATCAGATGGATGATTTAGGCACCCCCAGACCAGTTATTTCCTTCAATGTGCTTTTATCAGCTTGCGTGCGCTCAAAACTATATGATTGTGTCCCCCAGCTGCTTGATGAAATTTCAGTGAAGTATGGATTTTTACCAGATAAAGTGTCGTACGATATACTAATTAGGTCATATTGTGAAATGAGATCGTCGAAAATGGCAATAAAAATACTCAAGGTGATAGAGGAGAAAAGTGTGGAGATTACAACGATTACTTTCACTACCATACTTCATTCATTCTACAAGAAAGGGAAGAATGATGAGGCGGAGAAGGTATGGAACGAGATGGTGAACAAAGGGTGTGGTCCAGATGTTGGTGCATACAATGTGAAGATCATAAACATTCAGGGGGGTGATTTGGAGGGCGTGAAAGCTTTAATTGAGGAAATGACGATGTTGGATTGAAACCTGATACGACTAGCTACAATTACTTGATGACTTGTTATTGTAACAATGAATTGATGGACGAGGCACAAATAGTTTATGATGATCTGG</gDNA_template>
            <first_frame> S  K  F  I  I  R  W  M  I  *  A  P  P  D  Q  L  F  P  S  M  C  F  Y  Q  L  A  C  A  Q  N  Y  M  I  V  S  P  S  C  L  M  K  F  Q  *  S  M  D  F  Y  Q  I  K  C  R  T  I  Y  *  L  G  H  I  V  K  *  D  R  R  K  W  Q  *  K  Y  S  R  *  *  R  R  K  V  W  R  L  Q  R  L  L  S  L  P  Y  F  I  H  S  T  R  K  G  R  M  M  R  R  R  R  Y  G  T  R  W  *  T  K  G  V  V  Q  M  L  V  H  T  M  *  R  S  *  T  F  R  G  V  I  W  R  A  *  K  L  *  L  R  K  *  R  C  W  I  E  T  *  Y  D  *  L  Q  L  L  D  D  L  L  L  *  Q  *  I  D  G  R  G  T  N  S  L  *  *  S   </first_frame>
            <second_frame>  Q  N  L  S  S  D  G  *  F  R  H  P  Q  T  S  Y  F  L  Q  C  A  F  I  S  L  R  A  L  K  T  I  *  L  C  P  P  A  A  *  *  N  F  S  E  V  W  I  F  T  R  *  S  V  V  R  Y  T  N  *  V  I  L  *  N  E  I  V  E  N  G  N  K  N  T  Q  G  D  R  G  E  K  C  G  D  Y  N  D  Y  F  H  Y  H  T  S  F  I  L  Q  E  R  E  E  *  *  G  G  E  G  M  E  R  D  G  E  Q  R  V  W  S  R  C  W  C  I  Q  C  E  D  H  K  H  S  G  G  *  F  G  G  R  E  S  F  N  *  G  N  D  D  V  G  L  K  P  D  T  T  S  Y  N  Y  L  M  T  C  Y  C  N  N  E  L  M  D  E  A  Q  I  V  Y  D  D  L  </second_frame>
            <third_frame>   K  I  Y  H  Q  M  D  D  L  G  T  P  R  P  V  I  S  F  N  V  L  L  S  A  C  V  R  S  K  L  Y  D  C  V  P  Q  L  L  D  E  I  S  V  K  Y  G  F  L  P  D  K  V  S  Y  D  I  L  I  R  S  Y  C  E  M  R  S  S  K  M  A  I  K  I  L  K  V  I  E  E  K  S  V  E  I  T  T  I  T  F  T  T  I  L  H  S  F  Y  K  K  G  K  N  D  E  A  E  K  V  W  N  E  M  V  N  K  G  C  G  P  D  V  G  A  Y  N  V  K  I  I  N  I  Q  G  G  D  L  E  G  V  K  A  L  I  E  E  M  T  M  L  D  *  N  L  I  R  L  A  T  I  T  *  *  L  V  I  V  T  M  N  *  W  T  R  H  K  *  F  M  M  I  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="144730" stop="144278"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIYHQMDDLGTPRPVISFNVLLSACVRSKLYDCVPQLLDEISVKYGFLPDKVSYDILIRSYCEMRSSKMAIKILKVIEEKSVEITTITFTTILHSFYKKGKNDEAEKVWNEMVNKGCGPDVGAYNVKIINIQGGDLEGVKALIEEMTMLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="146194" PGL_stop="159694"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146194" e_stop="146570"/>
            <exon e_start="146660" e_stop="146728"/>
            <exon e_start="146868" e_stop="146975"/>
            <exon e_start="147883" e_stop="147954"/>
            <exon e_start="148582" e_stop="148740"/>
            <exon e_start="149334" e_stop="149369"/>
            <exon e_start="149625" e_stop="149731"/>
            <exon e_start="150742" e_stop="150813"/>
            <exon e_start="153173" e_stop="153221"/>
            <exon e_start="153354" e_stop="153946"/>
            <exon e_start="155209" e_stop="155391"/>
            <exon e_start="155465" e_stop="155585"/>
            <exon e_start="159162" e_stop="159694"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.958" e_score="0.978"/>
          <exon-intron don_prob="0.985" acc_prob="1.000" e_score="0.971"/>
          <exon-intron don_prob="0.982" acc_prob="0.665" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.992" e_score="0.972"/>
          <exon-intron don_prob="0.962" acc_prob="0.997" e_score="0.987"/>
          <exon-intron don_prob="0.990" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.889" acc_prob="0.982" e_score="0.981"/>
          <exon-intron don_prob="0.978" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.958" e_score="0.983"/>
          <exon-intron don_prob="0.978" acc_prob="0.876" e_score="0.978"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.983"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="146194" e_stop="146570" e_length="377"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.958">
            <gDNA_intron_boundary i_start="146571" i_stop="146659" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="146660" e_stop="146728" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="1.000">
            <gDNA_intron_boundary i_start="146729" i_stop="146867" i_length="139"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="146868" e_stop="146975" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.665">
            <gDNA_intron_boundary i_start="146976" i_stop="147882" i_length="907"/>
          </intron>
          <exon e_serial="4" e_score="0.972">
            <gDNA_exon_boundary e_start="147883" e_stop="147954" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.992">
            <gDNA_intron_boundary i_start="147955" i_stop="148581" i_length="627"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="148582" e_stop="148740" e_length="159"/>
          </exon>
          <intron i_serial="5" don_prob="0.962" acc_prob="0.997">
            <gDNA_intron_boundary i_start="148741" i_stop="149333" i_length="593"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="149334" e_stop="149369" e_length="36"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.955">
            <gDNA_intron_boundary i_start="149370" i_stop="149624" i_length="255"/>
          </intron>
          <exon e_serial="7" e_score="0.981">
            <gDNA_exon_boundary e_start="149625" e_stop="149731" e_length="107"/>
          </exon>
          <intron i_serial="7" don_prob="0.889" acc_prob="0.982">
            <gDNA_intron_boundary i_start="149732" i_stop="150741" i_length="1010"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="150742" e_stop="150813" e_length="72"/>
          </exon>
          <intron i_serial="8" don_prob="0.978" acc_prob="0.935">
            <gDNA_intron_boundary i_start="150814" i_stop="153172" i_length="2359"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="153173" e_stop="153221" e_length="49"/>
          </exon>
          <intron i_serial="9" don_prob="0.954" acc_prob="0.977">
            <gDNA_intron_boundary i_start="153222" i_stop="153353" i_length="132"/>
          </intron>
          <exon e_serial="10" e_score="0.983">
            <gDNA_exon_boundary e_start="153354" e_stop="153946" e_length="593"/>
          </exon>
          <intron i_serial="10" don_prob="0.989" acc_prob="0.958">
            <gDNA_intron_boundary i_start="153947" i_stop="155208" i_length="1262"/>
          </intron>
          <exon e_serial="11" e_score="0.978">
            <gDNA_exon_boundary e_start="155209" e_stop="155391" e_length="183"/>
          </exon>
          <intron i_serial="11" don_prob="0.978" acc_prob="0.876">
            <gDNA_intron_boundary i_start="155392" i_stop="155464" i_length="73"/>
          </intron>
          <exon e_serial="12" e_score="0.983">
            <gDNA_exon_boundary e_start="155465" e_stop="155585" e_length="121"/>
          </exon>
          <intron i_serial="12" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="155586" i_stop="159161" i_length="3576"/>
          </intron>
          <exon e_serial="13" e_score="0.925">
            <gDNA_exon_boundary e_start="159162" e_stop="159694" e_length="533"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146194" stop="146570"/>
              <exon start="146660" stop="146728"/>
              <exon start="146868" stop="146975"/>
              <exon start="147883" stop="147954"/>
              <exon start="148582" stop="148602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146206" stop="146570"/>
              <exon start="146660" stop="146728"/>
              <exon start="146868" stop="146975"/>
              <exon start="147883" stop="147954"/>
              <exon start="148582" stop="148740"/>
              <exon start="149334" stop="149369"/>
              <exon start="149625" stop="149731"/>
              <exon start="150742" stop="150813"/>
              <exon start="153173" stop="153221"/>
              <exon start="153354" stop="153946"/>
              <exon start="155209" stop="155391"/>
              <exon start="155465" stop="155585"/>
              <exon start="159162" stop="159694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146206" stop="146570"/>
              <exon start="146660" stop="146728"/>
              <exon start="146868" stop="146975"/>
              <exon start="147883" stop="147954"/>
              <exon start="148582" stop="148638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146206" stop="146570"/>
              <exon start="146660" stop="146728"/>
              <exon start="146868" stop="146933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146207" stop="146570"/>
              <exon start="146660" stop="146728"/>
              <exon start="146868" stop="146906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146358" stop="146570"/>
              <exon start="146660" stop="146728"/>
              <exon start="146868" stop="146975"/>
              <exon start="147883" stop="147954"/>
              <exon start="148582" stop="148696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150754" stop="150813"/>
              <exon start="153173" stop="153221"/>
              <exon start="153354" stop="153602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268671" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150756" stop="150813"/>
              <exon start="153173" stop="153221"/>
              <exon start="153354" stop="153625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269479" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGAGTTGAAGTTTCACTTTTCCATCCAGAAAATTGCAGTGATGGATTTGGACTTCGACGGTCCAAGTAAAGTCCCGAGCAGGCAAGCTCGTTTCGCTCCCAAGAACTCCAAATTAAAGCCCCAACCCAAAAGTGAAACACTGCCATTGAAGGTAGATTCAGAGATTCCGACTAAAAAGGAAGAATTTGTATCACAACCCCCTCTAAGAGATCATATAGTGAAAAACGGAGAGGCAAAAGTTGAGGACGACGTTCTTTTGAATGGAGAGACTACGGGAAACGATCTTGCAGAAGAACAAGTCGGAATGGAAACTGATAGCGATCAGGATGAAGTTGTTCGTGAAGTTGACGTGTGGCTTACCCCTTCCGCCAATGAG : TTCTATGTACTCCAATATCCGTTGAGGTCCGAATGGCGTCCCTATGGTTTGGATGAAAGATGCCAAGAT : GTGAGGTTGAGACCTTCATCGGCAGAAATGGAAGTTGATTTGGCAATAGATTTTGATTCTAAAAATTTCGACAGAGACTCTGTACATGCAGCAACAATAAAAAAACAG : ATTGTTTCTACAAAATGGGTGCCATCATCTACTTGTGCTGACTTTGCTGTTGGGATCTTCATTGGTGATAAG : TTCCACCTCAATCCTGTTCATGCAATTGTACAGCTCCGACCATCACTGCAGCATCGTAAGGAAAGTGAGTTGAAGAACCTTACCACCAGCAATGATGAAAAAAGTTGTGAAAACGAAGACGTCAAGGAGAAAAAGCCTGTGGGTCTGTCAAAGAAGCAG : AACAAACTACCTGGGAACTACAAGGATATTGGAGAG : CATTGGTTACATCTAAAATACCATGGGACTAGGAGTGACATTTCAGCCAGACATCTTCAAAAAATGGCTATGGAGGGAGGCTCCCCAGTACCATTTTCAATGATCCC : GAGTGATTATCTGAATGCCATTTGTCCTGCAAGACCAACTGACATTGACAGATTAAGAAATCTTAGAACAAG : GTTGTCTCAGAAACCTTTTGAAGAACGTGTTAGAACTTGGCTTCTTGAG : GGACCTCCAATTCATCGTTTTGATACTCTAAAGCACCTAGCTCCAGATAATCCTGTTGATGAGATTTTGGAAGTTCTCAAAAGTTGCGCACAATTAGTTCAAGGATTGTGGGTTGCAAAAAGTTCATTAGTCTATGACACAAACAATGGAGTCGAAGTTTTAGCGAGGAATTTTGTTCTTTATGAGTTTACCAAGAGTACTTTAATTAAGAAGTCAGTGTTTGGCAGGAGGCCTGAATTCCTTAAAGCTGCGACACCAGTTCTAAAATCATTAGCTGTTGAGAGGCCTGACCTGGATGATTGGAAGCTCAAAGAGCTTCCTGACAAGAAATTCGAAAACCTCTATGGTGATGTTGTAAGAGAGCAGGAAGCTATCTGGGAGTCCATGGGGAAACAGATCAATGATATTATGCATGGAGGAAGAAACAGGCCTACTTTGAAGAATCCTCTAAACCCAAAGGCCAACATTCCTGCGTTGTCAAGTAGTGATAAGCCCACTCCTACGACATTTTTGAGAACATCTCTGTCAGAAGAAATTCGTGGAGCTTTACCTAAGGCGCTTCAAAATGTTTTTAGAATCCATAAGGTTTGCAG : TTTGCTTCAAATTTGCGAACTGATGGAAAAGGAAGATCCAATGAAAGCTATAATTTCACCCGCGGGTATTTCTGATGCACTTCGAAAGGAGATAGAGGCAGTGGTTAATCAGATTGCTGTAAACATCCACGGTGTCTATGTTTTGAAGTCATCGCCAGATAATCCACAGTATGATGCATTGAG : GAAAGTTGTAATTGATCTTTTTATGGCCGAAGGGTCGAATGCAAAGCTAAAGAAAGCATCTATAGTTGAAGCTGCCAAGTTGCAACTGGGAAGGGATGTCACCACTGTGGAGTTTCAAAAG : GTTATGAAGGAACTATGTCGTTCAGAAAACTCAGCATGGGTTTTGGGAATCAGTGACAGCAATCCACAACAGTAGTCTGCTATTTTTGATTAAGTCGTACAGGTCATGGGAAGTTCACTGCTAGCTGCAGAAATTCTCAATGCTGAGGAGAAGTTGGCTTTTCTTGAAGTTCCACTTTACTCTTGAGAGTCATAATTGTTCAGTTTTGAGGTTAACACGGAGTCTCGCGTATATGGTTGAGCTGTTGATACGCTTCGCGGTGCATTTGCAAATCTGGGAGAAAATTTAGTTAGGATTAGCAGATGTCAAGCCTTTTTTGCTCATTCTTTTATCATTCAATTTATTCTTTTCATGAACGAAAATATAGTCAGATGTTTCTTTTCAATGTCTTGAATATCTCTGTTAAAATGTATGAATTGTTGCATCTCTTTACTTGCAGAAGAAAATCATTCAGCATATTTGTACCATCAGAAGAAAAATACAAGTTAAAAAGTTTGCCGTTCTTGTAATTATATACGTATTTGATTCACCAA</gDNA_template>
            <first_frame> W  S  *  S  F  T  F  P  S  R  K  L  Q  *  W  I  W  T  S  T  V  Q  V  K  S  R  A  G  K  L  V  S  L  P  R  T  P  N  *  S  P  N  P  K  V  K  H  C  H  *  R  *  I  Q  R  F  R  L  K  R  K  N  L  Y  H  N  P  L  *  E  I  I  *  *  K  T  E  R  Q  K  L  R  T  T  F  F  *  M  E  R  L  R  E  T  I  L  Q  K  N  K  S  E  W  K  L  I  A  I  R  M  K  L  F  V  K  L  T  C  G  L  P  L  P  P  M  S :   S  M  Y  S  N  I  R  *  G  P  N  G  V  P  M  V  W  M  K  D  A  K  M :   *  G  *  D  L  H  R  Q  K  W  K  L  I  W  Q  *  I  L  I  L  K  I  S  T  E  T  L  Y  M  Q  Q  Q  *  K  N  R :   L  F  L  Q  N  G  C  H  H  L  L  V  L  T  L  L  L  G  S  S  L  V  I  S :   S  T  S  I  L  F  M  Q  L  Y  S  S  D  H  H  C  S  I  V  R  K  V  S  *  R  T  L  P  P  A  M  M  K  K  V  V  K  T  K  T  S  R  R  K  S  L  W  V  C  Q  R  S  R :   T  N  Y  L  G  T  T  R  I  L  E  S :   I  G  Y  I  *  N  T  M  G  L  G  V  T  F  Q  P  D  I  F  K  K  W  L  W  R  E  A  P  Q  Y  H  F  Q  *  S   : R  V  I  I  *  M  P  F  V  L  Q  D  Q  L  T  L  T  D  *  E  I  L  E  Q   : G  C  L  R  N  L  L  K  N  V  L  E  L  G  F  L  R :   D  L  Q  F  I  V  L  I  L  *  S  T  *  L  Q  I  I  L  L  M  R  F  W  K  F  S  K  V  A  H  N  *  F  K  D  C  G  L  Q  K  V  H  *  S  M  T  Q  T  M  E  S  K  F  *  R  G  I  L  F  F  M  S  L  P  R  V  L  *  L  R  S  Q  C  L  A  G  G  L  N  S  L  K  L  R  H  Q  F  *  N  H  *  L  L  R  G  L  T  W  M  I  G  S  S  K  S  F  L  T  R  N  S  K  T  S  M  V  M  L  *  E  S  R  K  L  S  G  S  P  W  G  N  R  S  M  I  L  C  M  E  E  E  T  G  L  L  *  R  I  L  *  T  Q  R  P  T  F  L  R  C  Q  V  V  I  S  P  L  L  R  H  F  *  E  H  L  C  Q  K  K  F  V  E  L  Y  L  R  R  F  K  M  F  L  E  S  I  R  F  A   : V  C  F  K  F  A  N  *  W  K  R  K  I  Q  *  K  L  *  F  H  P  R  V  F  L  M  H  F  E  R  R  *  R  Q  W  L  I  R  L  L  *  T  S  T  V  S  M  F  *  S  H  R  Q  I  I  H  S  M  M  H  *   : G  K  L  *  L  I  F  L  W  P  K  G  R  M  Q  S  *  R  K  H  L  *  L  K  L  P  S  C  N  W  E  G  M  S  P  L  W  S  F  K  R :   L  *  R  N  Y  V  V  Q  K  T  Q  H  G  F  W  E  S  V  T  A  I  H  N  S  S  L  L  F  L  I  K  S  Y  R  S  W  E  V  H  C  *  L  Q  K  F  S  M  L  R  R  S  W  L  F  L  K  F  H  F  T  L  E  S  H  N  C  S  V  L  R  L  T  R  S  L  A  Y  M  V  E  L  L  I  R  F  A  V  H  L  Q  I  W  E  K  I  *  L  G  L  A  D  V  K  P  F  L  L  I  L  L  S  F  N  L  F  F  S  *  T  K  I  *  S  D  V  S  F  Q  C  L  E  Y  L  C  *  N  V  *  I  V  A  S  L  Y  L  Q  K  K  I  I  Q  H  I  C  T  I  R  R  K  I  Q  V  K  K  F  A  V  L  V  I  I  Y  V  F  D  S  P  </first_frame>
            <second_frame>  G  V  E  V  S  L  F  H  P  E  N  C  S  D  G  F  G  L  R  R  S  K  *  S  P  E  Q  A  S  S  F  R  S  Q  E  L  Q  I  K  A  P  T  Q  K  *  N  T  A  I  E  G  R  F  R  D  S  D  *  K  G  R  I  C  I  T  T  P  S  K  R  S  Y  S  E  K  R  R  G  K  S  *  G  R  R  S  F  E  W  R  D  Y  G  K  R  S  C  R  R  T  S  R  N  G  N  *  *  R  S  G  *  S  C  S  *  S  *  R  V  A  Y  P  F  R  Q  *   : V  L  C  T  P  I  S  V  E  V  R  M  A  S  L  W  F  G  *  K  M  P  R   : C  E  V  E  T  F  I  G  R  N  G  S  *  F  G  N  R  F  *  F  *  K  F  R  Q  R  L  C  T  C  S  N  N  K  K  T   : D  C  F  Y  K  M  G  A  I  I  Y  L  C  *  L  C  C  W  D  L  H  W  *  *   : V  P  P  Q  S  C  S  C  N  C  T  A  P  T  I  T  A  A  S  *  G  K  *  V  E  E  P  Y  H  Q  Q  *  *  K  K  L  *  K  R  R  R  Q  G  E  K  A  C  G  S  V  K  E  A   : E  Q  T  T  W  E  L  Q  G  Y  W  R   : A  L  V  T  S  K  I  P  W  D  *  E  *  H  F  S  Q  T  S  S  K  N  G  Y  G  G  R  L  P  S  T  I  F  N  D  P  :  E  *  L  S  E  C  H  L  S  C  K  T  N  *  H  *  Q  I  K  K  S  *  N  K  :  V  V  S  E  T  F  *  R  T  C  *  N  L  A  S  *   : G  T  S  N  S  S  F  *  Y  S  K  A  P  S  S  R  *  S  C  *  *  D  F  G  S  S  Q  K  L  R  T  I  S  S  R  I  V  G  C  K  K  F  I  S  L  *  H  K  Q  W  S  R  S  F  S  E  E  F  C  S  L  *  V  Y  Q  E  Y  F  N  *  E  V  S  V  W  Q  E  A  *  I  P  *  S  C  D  T  S  S  K  I  I  S  C  *  E  A  *  P  G  *  L  E  A  Q  R  A  S  *  Q  E  I  R  K  P  L  W  *  C  C  K  R  A  G  S  Y  L  G  V  H  G  E  T  D  Q  *  Y  Y  A  W  R  K  K  Q  A  Y  F  E  E  S  S  K  P  K  G  Q  H  S  C  V  V  K  *  *  *  A  H  S  Y  D  I  F  E  N  I  S  V  R  R  N  S  W  S  F  T  *  G  A  S  K  C  F  *  N  P  *  G  L  Q  :  F  A  S  N  L  R  T  D  G  K  G  R  S  N  E  S  Y  N  F  T  R  G  Y  F  *  C  T  S  K  G  D  R  G  S  G  *  S  D  C  C  K  H  P  R  C  L  C  F  E  V  I  A  R  *  S  T  V  *  C  I  E  :  E  S  C  N  *  S  F  Y  G  R  R  V  E  C  K  A  K  E  S  I  Y  S  *  S  C  Q  V  A  T  G  K  G  C  H  H  C  G  V  S  K   : G  Y  E  G  T  M  S  F  R  K  L  S  M  G  F  G  N  Q  *  Q  Q  S  T  T  V  V  C  Y  F  *  L  S  R  T  G  H  G  K  F  T  A  S  C  R  N  S  Q  C  *  G  E  V  G  F  S  *  S  S  T  L  L  L  R  V  I  I  V  Q  F  *  G  *  H  G  V  S  R  I  W  L  S  C  *  Y  A  S  R  C  I  C  K  S  G  R  K  F  S  *  D  *  Q  M  S  S  L  F  C  S  F  F  Y  H  S  I  Y  S  F  H  E  R  K  Y  S  Q  M  F  L  F  N  V  L  N  I  S  V  K  M  Y  E  L  L  H  L  F  T  C  R  R  K  S  F  S  I  F  V  P  S  E  E  K  Y  K  L  K  S  L  P  F  L  *  L  Y  T  Y  L  I  H  Q </second_frame>
            <third_frame>   E  L  K  F  H  F  S  I  Q  K  I  A  V  M  D  L  D  F  D  G  P  S  K  V  P  S  R  Q  A  R  F  A  P  K  N  S  K  L  K  P  Q  P  K  S  E  T  L  P  L  K  V  D  S  E  I  P  T  K  K  E  E  F  V  S  Q  P  P  L  R  D  H  I  V  K  N  G  E  A  K  V  E  D  D  V  L  L  N  G  E  T  T  G  N  D  L  A  E  E  Q  V  G  M  E  T  D  S  D  Q  D  E  V  V  R  E  V  D  V  W  L  T  P  S  A  N  E  :  F  Y  V  L  Q  Y  P  L  R  S  E  W  R  P  Y  G  L  D  E  R  C  Q  D  :  V  R  L  R  P  S  S  A  E  M  E  V  D  L  A  I  D  F  D  S  K  N  F  D  R  D  S  V  H  A  A  T  I  K  K  Q  :  I  V  S  T  K  W  V  P  S  S  T  C  A  D  F  A  V  G  I  F  I  G  D  K  :  F  H  L  N  P  V  H  A  I  V  Q  L  R  P  S  L  Q  H  R  K  E  S  E  L  K  N  L  T  T  S  N  D  E  K  S  C  E  N  E  D  V  K  E  K  K  P  V  G  L  S  K  K  Q  :  N  K  L  P  G  N  Y  K  D  I  G  E  :  H  W  L  H  L  K  Y  H  G  T  R  S  D  I  S  A  R  H  L  Q  K  M  A  M  E  G  G  S  P  V  P  F  S  M  I  P :   S  D  Y  L  N  A  I  C  P  A  R  P  T  D  I  D  R  L  R  N  L  R  T  R :   L  S  Q  K  P  F  E  E  R  V  R  T  W  L  L  E  :  G  P  P  I  H  R  F  D  T  L  K  H  L  A  P  D  N  P  V  D  E  I  L  E  V  L  K  S  C  A  Q  L  V  Q  G  L  W  V  A  K  S  S  L  V  Y  D  T  N  N  G  V  E  V  L  A  R  N  F  V  L  Y  E  F  T  K  S  T  L  I  K  K  S  V  F  G  R  R  P  E  F  L  K  A  A  T  P  V  L  K  S  L  A  V  E  R  P  D  L  D  D  W  K  L  K  E  L  P  D  K  K  F  E  N  L  Y  G  D  V  V  R  E  Q  E  A  I  W  E  S  M  G  K  Q  I  N  D  I  M  H  G  G  R  N  R  P  T  L  K  N  P  L  N  P  K  A  N  I  P  A  L  S  S  S  D  K  P  T  P  T  T  F  L  R  T  S  L  S  E  E  I  R  G  A  L  P  K  A  L  Q  N  V  F  R  I  H  K  V  C  S :   L  L  Q  I  C  E  L  M  E  K  E  D  P  M  K  A  I  I  S  P  A  G  I  S  D  A  L  R  K  E  I  E  A  V  V  N  Q  I  A  V  N  I  H  G  V  Y  V  L  K  S  S  P  D  N  P  Q  Y  D  A  L  R :   K  V  V  I  D  L  F  M  A  E  G  S  N  A  K  L  K  K  A  S  I  V  E  A  A  K  L  Q  L  G  R  D  V  T  T  V  E  F  Q  K  :  V  M  K  E  L  C  R  S  E  N  S  A  W  V  L  G  I  S  D  S  N  P  Q  Q  *  S  A  I  F  D  *  V  V  Q  V  M  G  S  S  L  L  A  A  E  I  L  N  A  E  E  K  L  A  F  L  E  V  P  L  Y  S  *  E  S  *  L  F  S  F  E  V  N  T  E  S  R  V  Y  G  *  A  V  D  T  L  R  G  A  F  A  N  L  G  E  N  L  V  R  I  S  R  C  Q  A  F  F  A  H  S  F  I  I  Q  F  I  L  F  M  N  E  N  I  V  R  C  F  F  S  M  S  *  I  S  L  L  K  C  M  N  C  C  I  S  L  L  A  E  E  N  H  S  A  Y  L  Y  H  Q  K  K  N  T  S  *  K  V  C  R  S  C  N  Y  I  R  I  *  F  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146196" stop="146570"/>
                    <exon start="146660" stop="146728"/>
                    <exon start="146868" stop="146975"/>
                    <exon start="147883" stop="147954"/>
                    <exon start="148582" stop="148740"/>
                    <exon start="149334" stop="149369"/>
                    <exon start="149625" stop="149731"/>
                    <exon start="150742" stop="150813"/>
                    <exon start="153173" stop="153221"/>
                    <exon start="153354" stop="153946"/>
                    <exon start="155209" stop="155391"/>
                    <exon start="155465" stop="155585"/>
                    <exon start="159162" stop="159236"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2016</number_coding_nucleotides>
                  <number_encoded_amino_acids>672</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELKFHFSIQKIAVMDLDFDGPSKVPSRQARFAPKNSKLKPQPKSETLPLKVDSEIPTKKEEFVSQPPLRDHIVKNGEAKVEDDVLLNGETTGNDLAEEQVGMETDSDQDEVVREVDVWLTPSANEFYVLQYPLRSEWRPYGLDERCQDVRLRPSSAEMEVDLAIDFDSKNFDRDSVHAATIKKQIVSTKWVPSSTCADFAVGIFIGDKFHLNPVHAIVQLRPSLQHRKESELKNLTTSNDEKSCENEDVKEKKPVGLSKKQNKLPGNYKDIGEHWLHLKYHGTRSDISARHLQKMAMEGGSPVPFSMIPSDYLNAICPARPTDIDRLRNLRTRLSQKPFEERVRTWLLEGPPIHRFDTLKHLAPDNPVDEILEVLKSCAQLVQGLWVAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPDLDDWKLKELPDKKFENLYGDVVREQEAIWESMGKQINDIMHGGRNRPTLKNPLNPKANIPALSSSDKPTPTTFLRTSLSEEIRGALPKALQNVFRIHKVCSLLQICELMEKEDPMKAIISPAGISDALRKEIEAVVNQIAVNIHGVYVLKSSPDNPQYDALRKVVIDLFMAEGSNAKLKKASIVEAAKLQLGRDVTTVEFQKVMKELCRSENSAWVLGISDSNPQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="159461" stop="159670"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QMSSLFCSFFYHSIYSFHERKYSQMFLFNVLNISVKMYELLHLFTCRRKSFSIFVPSEEKYKLKSLPFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="160177" PGL_stop="166236"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="160177" e_stop="160316"/>
            <exon e_start="160993" e_stop="161273"/>
            <exon e_start="161564" e_stop="161671"/>
            <exon e_start="162327" e_stop="162397"/>
            <exon e_start="163007" e_stop="163080"/>
            <exon e_start="163158" e_stop="163202"/>
            <exon e_start="163289" e_stop="163348"/>
            <exon e_start="164063" e_stop="164123"/>
            <exon e_start="164212" e_stop="164324"/>
            <exon e_start="164677" e_stop="165123"/>
            <exon e_start="165230" e_stop="165365"/>
            <exon e_start="165470" e_stop="165537"/>
            <exon e_start="165842" e_stop="166236"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.813" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.815" e_score="1.000"/>
          <exon-intron don_prob="0.766" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="160177" e_stop="160316" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="160993" e_stop="161273" e_length="281"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="1.000">
            <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="161564" e_stop="161671" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.813">
            <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="162327" e_stop="162397" e_length="71"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="163007" e_stop="163080" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.978">
            <gDNA_intron_boundary i_start="163081" i_stop="163157" i_length="77"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="163158" e_stop="163202" e_length="45"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="163289" e_stop="163348" e_length="60"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.916">
            <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="164063" e_stop="164123" e_length="61"/>
          </exon>
          <intron i_serial="8" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="164212" e_stop="164324" e_length="113"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="164677" e_stop="165123" e_length="447"/>
          </exon>
          <intron i_serial="10" don_prob="0.989" acc_prob="0.815">
            <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="165230" e_stop="165365" e_length="136"/>
          </exon>
          <intron i_serial="11" don_prob="0.766" acc_prob="0.999">
            <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="165470" e_stop="165537" e_length="68"/>
          </exon>
          <intron i_serial="12" don_prob="0.989" acc_prob="0.994">
            <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="165842" e_stop="166236" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160177" stop="160316"/>
              <exon start="160993" stop="161273"/>
              <exon start="161564" stop="161578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160182" stop="160316"/>
              <exon start="160993" stop="161271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160235" stop="160316"/>
              <exon start="160993" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="163007" stop="163065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="161161" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="163007" stop="163050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="161163" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="163007" stop="163080"/>
              <exon start="163158" stop="163197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="161227" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="163007" stop="163080"/>
              <exon start="163158" stop="163202"/>
              <exon start="163289" stop="163315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="162356" stop="162397"/>
              <exon start="163007" stop="163080"/>
              <exon start="163158" stop="163202"/>
              <exon start="163289" stop="163348"/>
              <exon start="164063" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="164951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164073" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164820" stop="165123"/>
              <exon start="165230" stop="165352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164823" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423257" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164910" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164957" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577139" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164959" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572245" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165311" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279916" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACTCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG : CATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG : GCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAG : CAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG : GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAG : TTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG : GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG : TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG : GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG : GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAG : AGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG : GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG : GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGAATGTCTTTTTTCTTTTTATAATTATGGCT</gDNA_template>
            <first_frame> K  T  H  F  *  P  *  F  C  T  E  E  K  N  *  G  K  N  V  V  E  R  C  R  N  M  K  V  M  E  K  I  *  R  I  M  V  L  L  L  T  V  T  P  S  L  S :   I  L  L  V  T  P  R  K  K  G  A  H  Q  E  A  G  R  R  R  G  R  K  G  V  I  K  T  G  T  G  T  G  I  E  I  E  I  E  T  G  T  E  V  R  K  G  T  K  I  G  I  G  T  E  R  G  R  R  T  V  I  V  I  T  E  I  V  I  G  I  G  V  I  G  G  R  G  S  E  I  E  M  K  M  I  F  S  E  L  E  I  T  I   : G  E  E  T  M  T  K  I  E  R  T  D  R  D  T  S  L  A  L  G  V  D  P  S  I  D  Q  G  L  D  H  G  H  H  L  R   : A  K  G  S  V  V  L  I  W  H  L  P  P  V  H  C  Y  L  A  L  L  M  L  Q  :  V  K  F  L  G  P  L  T  H  Q  Y  L  E  C  F  L  T  C  F  L  *  Q  Q  A  S :   L  E  L  S  L  L  C  Q  S  R  Q  *  H  S  R :   L  P  D  M  L  G  E  F  M  L  V  D  F  R  L  L  Q  M  N  S :   R  L  L  P  S  L  V  M  S  C  M  Q  S  E  E  I  L  L  V  Q  :  G  M  L  L  S  T  F  I  *  T  M  R  R  S  L  P  L  L  K  *  D  L  L  R  K  L  V  M  Q  W  L  W  M  V  S  F  L  R :   A  D  R  L  R  L  E  D  P  V  I  T  I  L  P  W  Q  L  H  L  V  L  V  N  R  A  P  T  S  T  W  Q  L  L  D  *  H  Q  V  L  P  E  G  L  K  D  L  T  V  Y  L  L  V  V  Y  P  I  I  L  Q  N  H  K  S  G  N  F  *  S  L  L  V  N  F  E  D  L  I  W  S  K  I  E  K  L  G  I  Q  K  V  M  L  F  V  C  T  R  M  S  L  L  L  I  L  L  V  Q  L  L  M  G  L  R  W  G  I  K  L  L  L  L  G  G  L  T  R  A  Q  P  N  P  T  L  S  K  R  V  Y  C  C  M  H  N  S  R  *  L  C  R :   G  S  C  Y  N  L  V  H  *  P  Q  R  F  C  A  *  Q  K  W  L  A  *  M  S  S  K  M  M  M  T  I  K  I  F  W  K  I  *  G  L  N  V  V  N  L  :  E  L  S  *  M  L  S  F  H  V  Q  I  L  M  A  S  L  H  L  D  S  G  R :   Y  S  W  S  M  Q  M  L  T  V  P  A  K  L  A  K  G  *  M  E  E  N  L  V  V  T  K  L  L  L  S  S  I  Q  R  T  S  S  L  R  E  I  T  R  L  N  C  N  H  Y  S  C  D  I  I  F  R  L  L  Q  G  V  V  C  M  S  Y  R  N  Y  I  P  L  L  T  K  I  I  S  V  L  S  F  F  L  L  L  F  C  F  G  E  H  G  I  F  Y  S  G  L  N  L  V  C  G  *  S  W  C  K  V  S  N  R  N  S  V  I  G  L  F  E  C  L  F  S  F  Y  N  Y  G  </first_frame>
            <second_frame>  K  L  I  S  S  P  S  F  V  L  K  R  K  I  R  V  K  T  *  W  N  D  A  G  I  *  R  *  W  R  R  Y  R  E  *  W  F  F  S  L  Q  *  L  Q  V  S   : A  Y  F  S  *  P  R  E  R  K  G  L  I  K  K  Q  G  E  G  E  G  E  R  A  *  *  R  P  G  Q  G  Q  E  *  R  *  R  *  R  Q  G  Q  R  *  G  K  G  Q  R  *  G  *  G  Q  R  E  G  E  G  P  *  S  S  S  Q  R  S  S  *  G  S  E  *  *  E  G  E  D  Q  R  S  R  *  R  *  S  S  A  N  S  R  L  R  *  :  A  K  R  Q  *  Q  R  *  R  G  P  T  E  T  Q  A  *  L  *  G  *  I  R  A  *  I  K  V  *  I  T  V  T  I  *  E  :  Q  K  D  Q  W  F  *  Y  G  T  S  H  Q  C  I  A  I  W  R  Y  *  C  C  R :   S  S  S  W  D  H  *  P  I  N  T  W  N  V  F  *  H  V  S  S  S  S  R  P   : V  W  S  S  P  Y  Y  A  S  P  G  N  D  T  A   : G  Y  Q  T  C  S  A  S  L  C  W  W  T  S  A  Y  C  K  *  T   : V  G  C  Y  L  L  *  S  C  H  V  C  N  R  R  K  Y  C  W  S  R :   G  C  C  C  Q  R  L  Y  K  P  *  E  E  V  C  L  C  *  N  E  I  C  *  G  S  *  *  C  N  G  F  G  W  C  H  F  *   : G  R  T  G  *  G  *  K  T  Q  *  L  Q  S  F  L  G  S  Y  T  W  S  *  S  T  E  P  Q  P  Q  P  G  S  C  W  I  D  T  R  F  F  R  R  A  *  R  T  *  P  Y  I  C  W  W  F  T  L  L  F  Y  R  I  T  N  Q  G  T  F  R  V  F  W  S  T  S  R  I  *  S  G  Q  R  *  R  N  W  E  F  K  R  L  C  F  L  C  V  P  G  C  L  C  Y  *  Y  C  L  C  S  S  *  W  D  *  D  G  G  *  N  S  Y  C  *  A  G  *  P  G  H  N  P  T  Q  P  *  A  R  E  C  I  V  A  C  T  T  A  D  S  F  A   : E  V  H  V  T  T  W  C  I  S  H  K  G  F  V  L  D  R  S  G  *  R  R  *  A  Q  R  *  *  *  L  S  R  Y  F  G  R  Y  E  D  *  M  W  *  I  W :   S  S  P  E  C  C  H  S  T  S  K  S  *  W  R  A  Y  T  W  T  R  E   : G  I  P  G  V  C  R  C  *  Q  F  Q  Q  S  S  P  R  A  E  W  K  K  I  W  W  *  P  S  Y  C  C  L  L  S  R  E  Q  V  L  *  G  R  L  R  G  L  T  V  T  T  I  A  V  T  *  Y  S  D  Y  Y  R  E  L  F  A  C  P  I  G  I  I  S  P  F  *  Q  R  L  L  V  S  C  L  F  F  F  C  F  F  V  L  V  S  M  G  Y  F  I  L  D  *  I  *  F  V  V  K  A  G  V  K  Y  Q  T  G  I  V  L  S  G  C  L  N  V  F  F  L  F  I  I  M  A </second_frame>
            <third_frame>   N  S  F  L  A  L  V  L  Y  *  R  E  K  L  G  *  K  R  S  G  T  M  Q  E  Y  E  G  N  G  E  D  I  E  N  N  G  S  S  P  Y  S  D  S  K  S  Q  :  H  T  S  R  D  P  E  K  E  R  G  S  S  R  S  R  E  K  E  R  E  K  G  R  D  K  D  R  D  R  D  R  N  R  D  R  D  R  D  R  D  R  G  K  E  R  D  K  D  R  D  R  D  R  E  R  E  K  D  R  D  R  H  H  R  D  R  H  R  D  R  S  D  R  R  E  R  I  R  D  R  D  E  D  D  L  Q  R  T  R  D  Y  D  R :   R  R  D  N  D  K  D  R  E  D  R  Q  R  H  K  P  S  S  R  G  R  S  E  H  R  S  R  S  R  S  R  S  P  S  K  S :   K  R  I  S  G  F  D  M  A  P  P  T  S  A  L  L  S  G  A  T  D  V  A   : G  Q  V  P  G  T  T  N  P  S  I  P  G  M  F  S  N  M  F  P  L  A  A  G  Q  :  F  G  A  L  P  I  M  P  V  Q  A  M  T  Q  Q  :  A  T  R  H  A  R  R  V  Y  V  G  G  L  P  P  T  A  N  E  Q  :  S  V  A  T  F  F  S  H  V  M  Y  A  I  G  G  N  T  A  G  P   : G  D  A  V  V  N  V  Y  I  N  H  E  K  K  F  A  F  V  E  M  R  S  V  E  E  A  S  N  A  M  A  L  D  G  V  I  F  E  :  G  G  P  V  K  V  R  R  P  S  D  Y  N  P  S  L  A  A  T  L  G  P  S  Q  P  S  P  N  L  N  L  A  A  V  G  L  T  P  G  S  S  G  G  L  E  G  P  D  R  I  F  V  G  G  L  P  Y  Y  F  T  E  S  Q  I  R  E  L  L  E  S  F  G  Q  L  R  G  F  D  L  V  K  D  R  E  T  G  N  S  K  G  Y  A  F  C  V  Y  Q  D  V  S  V  T  D  I  A  C  A  A  L  N  G  I  K  M  G  D  K  T  L  T  V  R  R  A  N  Q  G  T  T  Q  P  N  P  E  Q  E  S  V  L  L  H  A  Q  Q  Q  I  A  L  Q  :  R  F  M  L  Q  P  G  A  L  A  T  K  V  L  C  L  T  E  V  V  S  V  D  E  L  K  D  D  D  D  Y  Q  D  I  L  E  D  M  R  I  E  C  G  K  F   : G  A  L  L  N  V  V  I  P  R  P  N  P  N  G  E  P  T  P  G  L  G  K  :  V  F  L  E  Y  A  D  V  D  S  S  S  K  A  R  Q  G  L  N  G  R  K  F  G  G  N  Q  V  I  A  V  F  Y  P  E  N  K  F  S  E  G  D  Y  E  A  *  L  *  P  L  *  L  *  H  N  I  Q  I  I  T  G  S  C  L  H  V  L  *  E  L  Y  P  P  F  D  K  D  Y  *  C  P  V  F  F  S  F  A  F  L  F  W  *  A  W  D  I  L  F  W  I  K  F  S  L  W  L  K  L  V  *  S  I  K  Q  E  *  C  Y  R  V  V  *  M  S  F  F  F  L  *  L  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="160227" stop="160316"/>
                    <exon start="160993" stop="161273"/>
                    <exon start="161564" stop="161671"/>
                    <exon start="162327" stop="162397"/>
                    <exon start="163007" stop="163080"/>
                    <exon start="163158" stop="163202"/>
                    <exon start="163289" stop="163348"/>
                    <exon start="164063" stop="164123"/>
                    <exon start="164212" stop="164324"/>
                    <exon start="164677" stop="165123"/>
                    <exon start="165230" stop="165365"/>
                    <exon start="165470" stop="165537"/>
                    <exon start="165842" stop="165979"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1689</number_coding_nucleotides>
                  <number_encoded_amino_acids>563</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRSGTMQEYEGNGEDIENNGSSPYSDSKSQHTSRDPEKERGSSRSREKEREKGRDKDRDRDRNRDRDRDRDRGKERDKDRDRDREREKDRDRHHRDRHRDRSDRRERIRDRDEDDLQRTRDYDRRRDNDKDREDRQRHKPSSRGRSEHRSRSRSRSPSKSKRISGFDMAPPTSALLSGATDVAGQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="160177" e_stop="160316"/>
            <exon e_start="160993" e_stop="161273"/>
            <exon e_start="161564" e_stop="161671"/>
            <exon e_start="162327" e_stop="162397"/>
            <exon e_start="163007" e_stop="163202"/>
            <exon e_start="163289" e_stop="163348"/>
            <exon e_start="164063" e_stop="164123"/>
            <exon e_start="164212" e_stop="164324"/>
            <exon e_start="164677" e_stop="165123"/>
            <exon e_start="165230" e_stop="165365"/>
            <exon e_start="165470" e_stop="165537"/>
            <exon e_start="165842" e_stop="166236"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.813" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.815" e_score="1.000"/>
          <exon-intron don_prob="0.766" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="160177" e_stop="160316" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="160993" e_stop="161273" e_length="281"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="1.000">
            <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="161564" e_stop="161671" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.813">
            <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="162327" e_stop="162397" e_length="71"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="162398" i_stop="163006" i_length="609"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="163007" e_stop="163202" e_length="196"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="163289" e_stop="163348" e_length="60"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.916">
            <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="164063" e_stop="164123" e_length="61"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="164212" e_stop="164324" e_length="113"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="164677" e_stop="165123" e_length="447"/>
          </exon>
          <intron i_serial="9" don_prob="0.989" acc_prob="0.815">
            <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="165230" e_stop="165365" e_length="136"/>
          </exon>
          <intron i_serial="10" don_prob="0.766" acc_prob="0.999">
            <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="165470" e_stop="165537" e_length="68"/>
          </exon>
          <intron i_serial="11" don_prob="0.989" acc_prob="0.994">
            <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="165842" e_stop="166236" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160177" stop="160316"/>
              <exon start="160993" stop="161273"/>
              <exon start="161564" stop="161578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160182" stop="160316"/>
              <exon start="160993" stop="161271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160235" stop="160316"/>
              <exon start="160993" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="163007" stop="163065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="161161" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="163007" stop="163050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="162342" stop="162397"/>
              <exon start="163007" stop="163202"/>
              <exon start="163289" stop="163348"/>
              <exon start="164063" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="164803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="162342" stop="162397"/>
              <exon start="163007" stop="163202"/>
              <exon start="163289" stop="163348"/>
              <exon start="164063" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="164803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="162343" stop="162397"/>
              <exon start="163007" stop="163202"/>
              <exon start="163289" stop="163348"/>
              <exon start="164063" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="164918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164073" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164820" stop="165123"/>
              <exon start="165230" stop="165352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164823" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423257" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164910" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164957" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577139" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164959" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572245" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165311" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279916" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACTCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG : CATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG : GCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAG : CAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG : GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAGGTACTGTGACAGATCCTTCTTAGCATACCTTCACTGGTTATCTATATTCTCATATATTTGTTTTGTGGCTTCTCTAGTTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG : GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG : TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG : GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG : GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAG : AGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG : GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG : GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGAATGTCTTTTTTCTTTTTATAATTATGGCT</gDNA_template>
            <first_frame> K  T  H  F  *  P  *  F  C  T  E  E  K  N  *  G  K  N  V  V  E  R  C  R  N  M  K  V  M  E  K  I  *  R  I  M  V  L  L  L  T  V  T  P  S  L  S :   I  L  L  V  T  P  R  K  K  G  A  H  Q  E  A  G  R  R  R  G  R  K  G  V  I  K  T  G  T  G  T  G  I  E  I  E  I  E  T  G  T  E  V  R  K  G  T  K  I  G  I  G  T  E  R  G  R  R  T  V  I  V  I  T  E  I  V  I  G  I  G  V  I  G  G  R  G  S  E  I  E  M  K  M  I  F  S  E  L  E  I  T  I   : G  E  E  T  M  T  K  I  E  R  T  D  R  D  T  S  L  A  L  G  V  D  P  S  I  D  Q  G  L  D  H  G  H  H  L  R   : A  K  G  S  V  V  L  I  W  H  L  P  P  V  H  C  Y  L  A  L  L  M  L  Q  :  V  K  F  L  G  P  L  T  H  Q  Y  L  E  C  F  L  T  C  F  L  *  Q  Q  A  R  Y  C  D  R  S  F  L  A  Y  L  H  W  L  S  I  F  S  Y  I  C  F  V  A  S  L  V  W  S  S  P  Y  Y  A  S  P  G  N  D  T  A   : G  Y  Q  T  C  S  A  S  L  C  W  W  T  S  A  Y  C  K  *  T   : V  G  C  Y  L  L  *  S  C  H  V  C  N  R  R  K  Y  C  W  S  R :   G  C  C  C  Q  R  L  Y  K  P  *  E  E  V  C  L  C  *  N  E  I  C  *  G  S  *  *  C  N  G  F  G  W  C  H  F  *   : G  R  T  G  *  G  *  K  T  Q  *  L  Q  S  F  L  G  S  Y  T  W  S  *  S  T  E  P  Q  P  Q  P  G  S  C  W  I  D  T  R  F  F  R  R  A  *  R  T  *  P  Y  I  C  W  W  F  T  L  L  F  Y  R  I  T  N  Q  G  T  F  R  V  F  W  S  T  S  R  I  *  S  G  Q  R  *  R  N  W  E  F  K  R  L  C  F  L  C  V  P  G  C  L  C  Y  *  Y  C  L  C  S  S  *  W  D  *  D  G  G  *  N  S  Y  C  *  A  G  *  P  G  H  N  P  T  Q  P  *  A  R  E  C  I  V  A  C  T  T  A  D  S  F  A   : E  V  H  V  T  T  W  C  I  S  H  K  G  F  V  L  D  R  S  G  *  R  R  *  A  Q  R  *  *  *  L  S  R  Y  F  G  R  Y  E  D  *  M  W  *  I  W :   S  S  P  E  C  C  H  S  T  S  K  S  *  W  R  A  Y  T  W  T  R  E   : G  I  P  G  V  C  R  C  *  Q  F  Q  Q  S  S  P  R  A  E  W  K  K  I  W  W  *  P  S  Y  C  C  L  L  S  R  E  Q  V  L  *  G  R  L  R  G  L  T  V  T  T  I  A  V  T  *  Y  S  D  Y  Y  R  E  L  F  A  C  P  I  G  I  I  S  P  F  *  Q  R  L  L  V  S  C  L  F  F  F  C  F  F  V  L  V  S  M  G  Y  F  I  L  D  *  I  *  F  V  V  K  A  G  V  K  Y  Q  T  G  I  V  L  S  G  C  L  N  V  F  F  L  F  I  I  M  A </first_frame>
            <second_frame>  K  L  I  S  S  P  S  F  V  L  K  R  K  I  R  V  K  T  *  W  N  D  A  G  I  *  R  *  W  R  R  Y  R  E  *  W  F  F  S  L  Q  *  L  Q  V  S   : A  Y  F  S  *  P  R  E  R  K  G  L  I  K  K  Q  G  E  G  E  G  E  R  A  *  *  R  P  G  Q  G  Q  E  *  R  *  R  *  R  Q  G  Q  R  *  G  K  G  Q  R  *  G  *  G  Q  R  E  G  E  G  P  *  S  S  S  Q  R  S  S  *  G  S  E  *  *  E  G  E  D  Q  R  S  R  *  R  *  S  S  A  N  S  R  L  R  *  :  A  K  R  Q  *  Q  R  *  R  G  P  T  E  T  Q  A  *  L  *  G  *  I  R  A  *  I  K  V  *  I  T  V  T  I  *  E  :  Q  K  D  Q  W  F  *  Y  G  T  S  H  Q  C  I  A  I  W  R  Y  *  C  C  R :   S  S  S  W  D  H  *  P  I  N  T  W  N  V  F  *  H  V  S  S  S  S  R  P  G  T  V  T  D  P  S  *  H  T  F  T  G  Y  L  Y  S  H  I  F  V  L  W  L  L  *  F  G  A  L  P  I  M  P  V  Q  A  M  T  Q  Q  :  A  T  R  H  A  R  R  V  Y  V  G  G  L  P  P  T  A  N  E  Q  :  S  V  A  T  F  F  S  H  V  M  Y  A  I  G  G  N  T  A  G  P   : G  D  A  V  V  N  V  Y  I  N  H  E  K  K  F  A  F  V  E  M  R  S  V  E  E  A  S  N  A  M  A  L  D  G  V  I  F  E  :  G  G  P  V  K  V  R  R  P  S  D  Y  N  P  S  L  A  A  T  L  G  P  S  Q  P  S  P  N  L  N  L  A  A  V  G  L  T  P  G  S  S  G  G  L  E  G  P  D  R  I  F  V  G  G  L  P  Y  Y  F  T  E  S  Q  I  R  E  L  L  E  S  F  G  Q  L  R  G  F  D  L  V  K  D  R  E  T  G  N  S  K  G  Y  A  F  C  V  Y  Q  D  V  S  V  T  D  I  A  C  A  A  L  N  G  I  K  M  G  D  K  T  L  T  V  R  R  A  N  Q  G  T  T  Q  P  N  P  E  Q  E  S  V  L  L  H  A  Q  Q  Q  I  A  L  Q  :  R  F  M  L  Q  P  G  A  L  A  T  K  V  L  C  L  T  E  V  V  S  V  D  E  L  K  D  D  D  D  Y  Q  D  I  L  E  D  M  R  I  E  C  G  K  F   : G  A  L  L  N  V  V  I  P  R  P  N  P  N  G  E  P  T  P  G  L  G  K  :  V  F  L  E  Y  A  D  V  D  S  S  S  K  A  R  Q  G  L  N  G  R  K  F  G  G  N  Q  V  I  A  V  F  Y  P  E  N  K  F  S  E  G  D  Y  E  A  *  L  *  P  L  *  L  *  H  N  I  Q  I  I  T  G  S  C  L  H  V  L  *  E  L  Y  P  P  F  D  K  D  Y  *  C  P  V  F  F  S  F  A  F  L  F  W  *  A  W  D  I  L  F  W  I  K  F  S  L  W  L  K  L  V  *  S  I  K  Q  E  *  C  Y  R  V  V  *  M  S  F  F  F  L  *  L  W   </second_frame>
            <third_frame>   N  S  F  L  A  L  V  L  Y  *  R  E  K  L  G  *  K  R  S  G  T  M  Q  E  Y  E  G  N  G  E  D  I  E  N  N  G  S  S  P  Y  S  D  S  K  S  Q  :  H  T  S  R  D  P  E  K  E  R  G  S  S  R  S  R  E  K  E  R  E  K  G  R  D  K  D  R  D  R  D  R  N  R  D  R  D  R  D  R  D  R  G  K  E  R  D  K  D  R  D  R  D  R  E  R  E  K  D  R  D  R  H  H  R  D  R  H  R  D  R  S  D  R  R  E  R  I  R  D  R  D  E  D  D  L  Q  R  T  R  D  Y  D  R :   R  R  D  N  D  K  D  R  E  D  R  Q  R  H  K  P  S  S  R  G  R  S  E  H  R  S  R  S  R  S  R  S  P  S  K  S :   K  R  I  S  G  F  D  M  A  P  P  T  S  A  L  L  S  G  A  T  D  V  A   : G  Q  V  P  G  T  T  N  P  S  I  P  G  M  F  S  N  M  F  P  L  A  A  G  Q  V  L  *  Q  I  L  L  S  I  P  S  L  V  I  Y  I  L  I  Y  L  F  C  G  F  S  S  L  E  L  S  L  L  C  Q  S  R  Q  *  H  S  R :   L  P  D  M  L  G  E  F  M  L  V  D  F  R  L  L  Q  M  N  S :   R  L  L  P  S  L  V  M  S  C  M  Q  S  E  E  I  L  L  V  Q  :  G  M  L  L  S  T  F  I  *  T  M  R  R  S  L  P  L  L  K  *  D  L  L  R  K  L  V  M  Q  W  L  W  M  V  S  F  L  R :   A  D  R  L  R  L  E  D  P  V  I  T  I  L  P  W  Q  L  H  L  V  L  V  N  R  A  P  T  S  T  W  Q  L  L  D  *  H  Q  V  L  P  E  G  L  K  D  L  T  V  Y  L  L  V  V  Y  P  I  I  L  Q  N  H  K  S  G  N  F  *  S  L  L  V  N  F  E  D  L  I  W  S  K  I  E  K  L  G  I  Q  K  V  M  L  F  V  C  T  R  M  S  L  L  L  I  L  L  V  Q  L  L  M  G  L  R  W  G  I  K  L  L  L  L  G  G  L  T  R  A  Q  P  N  P  T  L  S  K  R  V  Y  C  C  M  H  N  S  R  *  L  C  R :   G  S  C  Y  N  L  V  H  *  P  Q  R  F  C  A  *  Q  K  W  L  A  *  M  S  S  K  M  M  M  T  I  K  I  F  W  K  I  *  G  L  N  V  V  N  L  :  E  L  S  *  M  L  S  F  H  V  Q  I  L  M  A  S  L  H  L  D  S  G  R :   Y  S  W  S  M  Q  M  L  T  V  P  A  K  L  A  K  G  *  M  E  E  N  L  V  V  T  K  L  L  L  S  S  I  Q  R  T  S  S  L  R  E  I  T  R  L  N  C  N  H  Y  S  C  D  I  I  F  R  L  L  Q  G  V  V  C  M  S  Y  R  N  Y  I  P  L  L  T  K  I  I  S  V  L  S  F  F  L  L  L  F  C  F  G  E  H  G  I  F  Y  S  G  L  N  L  V  C  G  *  S  W  C  K  V  S  N  R  N  S  V  I  G  L  F  E  C  L  F  S  F  Y  N  Y  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="163158" stop="163202"/>
                    <exon start="163289" stop="163348"/>
                    <exon start="164063" stop="164123"/>
                    <exon start="164212" stop="164324"/>
                    <exon start="164677" stop="165123"/>
                    <exon start="165230" stop="165365"/>
                    <exon start="165470" stop="165537"/>
                    <exon start="165842" stop="165979"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1065</number_coding_nucleotides>
                  <number_encoded_amino_acids>355</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYEA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="160227" stop="160316"/>
                    <exon start="160993" stop="161273"/>
                    <exon start="161564" stop="161671"/>
                    <exon start="162327" stop="162397"/>
                    <exon start="163007" stop="163089"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRSGTMQEYEGNGEDIENNGSSPYSDSKSQHTSRDPEKERGSSRSREKEREKGRDKDRDRDRNRDRDRDRDRGKERDKDRDRDREREKDRDRHHRDRHRDRSDRRERIRDRDEDDLQRTRDYDRRRDNDKDREDRQRHKPSSRGRSEHRSRSRSRSPSKSKRISGFDMAPPTSALLSGATDVAGQVPGTTNPSIPGMFSNMFPLAAGQVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="162668" e_stop="162765"/>
            <exon e_start="163007" e_stop="163080"/>
            <exon e_start="163158" e_stop="163202"/>
            <exon e_start="163289" e_stop="163348"/>
            <exon e_start="164063" e_stop="164123"/>
            <exon e_start="164212" e_stop="164324"/>
            <exon e_start="164677" e_stop="165123"/>
            <exon e_start="165230" e_stop="165365"/>
            <exon e_start="165470" e_stop="165537"/>
            <exon e_start="165842" e_stop="166236"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.956" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.978" e_score="0.959"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.916" e_score="0.983"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.815" e_score="1.000"/>
          <exon-intron don_prob="0.766" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="162668" e_stop="162765" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.956" acc_prob="0.986">
            <gDNA_intron_boundary i_start="162766" i_stop="163006" i_length="241"/>
          </intron>
          <exon e_serial="2" e_score="0.959">
            <gDNA_exon_boundary e_start="163007" e_stop="163080" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.978">
            <gDNA_intron_boundary i_start="163081" i_stop="163157" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="163158" e_stop="163202" e_length="45"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="163203" i_stop="163288" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="0.983">
            <gDNA_exon_boundary e_start="163289" e_stop="163348" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.916">
            <gDNA_intron_boundary i_start="163349" i_stop="164062" i_length="714"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="164063" e_stop="164123" e_length="61"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="164124" i_stop="164211" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="164212" e_stop="164324" e_length="113"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="164325" i_stop="164676" i_length="352"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="164677" e_stop="165123" e_length="447"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.815">
            <gDNA_intron_boundary i_start="165124" i_stop="165229" i_length="106"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="165230" e_stop="165365" e_length="136"/>
          </exon>
          <intron i_serial="8" don_prob="0.766" acc_prob="0.999">
            <gDNA_intron_boundary i_start="165366" i_stop="165469" i_length="104"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="165470" e_stop="165537" e_length="68"/>
          </exon>
          <intron i_serial="9" don_prob="0.989" acc_prob="0.994">
            <gDNA_intron_boundary i_start="165538" i_stop="165841" i_length="304"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="165842" e_stop="166236" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="162668" stop="162765"/>
              <exon start="163007" stop="163080"/>
              <exon start="163158" stop="163202"/>
              <exon start="163289" stop="163348"/>
              <exon start="164063" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="164986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164073" stop="164123"/>
              <exon start="164212" stop="164324"/>
              <exon start="164677" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164820" stop="165123"/>
              <exon start="165230" stop="165352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164823" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423257" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164910" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164957" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577139" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="164959" stop="165123"/>
              <exon start="165230" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572245" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165310" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="165311" stop="165365"/>
              <exon start="165470" stop="165537"/>
              <exon start="165842" stop="166207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279916" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCTAAGAAGGCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAG : GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTAGCAGCAGGCCAG : TTTGGAGCTCTCCCTATTATGCCAGTCCAGGCAATGACACAGCAG : GCTACCAGACATGCTCGGCGAGTTTATGTTGGTGGACTTCCGCCTACTGCAAATGAACAG : TCGGTTGCTACCTTCTTTAGTCATGTCATGTATGCAATCGGAGGAAATACTGCTGGTCCAG : GGGATGCTGTTGTCAACGTTTATATAAACCATGAGAAGAAGTTTGCCTTTGTTGAAATGAGATCTGTTGAGGAAGCTAGTAATGCAATGGCTTTGGATGGTGTCATTTTTGAG : GGCGGACCGGTTAAGGTTAGAAGACCCAGTGATTACAATCCTTCCTTGGCAGCTACACTTGGTCCTAGTCAACCGAGCCCCAACCTCAACCTGGCAGCTGTTGGATTGACACCAGGTTCTTCCGGAGGGCTTGAAGGACCTGACCGTATATTTGTTGGTGGTTTACCCTATTATTTTACAGAATCACAAATCAGGGAACTTTTAGAGTCTTTTGGTCAACTTCGAGGATTTGATCTGGTCAAAGATAGAGAAACTGGGAATTCAAAAGGTTATGCTTTTTGTGTGTACCAGGATGTCTCTGTTACTGATATTGCTTGTGCAGCTCTTAATGGGATTAAGATGGGGGATAAAACTCTTACTGTTAGGCGGGCTAACCAGGGCACAACCCAACCCAACCCTGAGCAAGAGAGTGTATTGTTGCATGCACAACAGCAGATAGCTTTGCAG : AGGTTCATGTTACAACCTGGTGCATTAGCCACAAAGGTTTTGTGCTTGACAGAAGTGGTTAGCGTAGATGAGCTCAAAGATGATGATGACTATCAAGATATTTTGGAAGATATGAGGATTGAATGTGGTAAATTTG : GAGCTCTCCTGAATGTTGTCATTCCACGTCCAAATCCTAATGGCGAGCCTACACCTGGACTCGGGAAG : GTATTCCTGGAGTATGCAGATGTTGACAGTTCCAGCAAAGCTCGCCAAGGGCTGAATGGAAGAAAATTTGGTGGTAACCAAGTTATTGCTGTCTTCTATCCAGAGAACAAGTTCTCTGAGGGAGATTACGAGGCTTAACTGTAACCACTATAGCTGTGACATAATATTCAGATTATTACAGGGAGTTGTTTGCATGTCCTATAGGAATTATATCCCCCTTTTGACAAAGATTATTAGTGTCCTGTCTTTTTTTCTTTTGCTTTTTTGTTTTGGTGAGCATGGGATATTTTATTCTGGATTAAATTTAGTTTGTGGTTAAAGCTGGTGTAAAGTATCAAACAGGAATAGTGTTATCGGGTTGTTTGAATGTCTTTTTTCTTTTTATAATTATGGCT</gDNA_template>
            <first_frame> V  L  R  R  Q  C  W  A  T  C  P  T  V  L  T  M  G  V  S  R  L  L  *  L  I  C  T  R  K  N  R  Y  R :   S  S  S  W  D  H  *  P  I  N  T  W  N  V  F  *  H  V  S  S  S  S  R  P   : V  W  S  S  P  Y  Y  A  S  P  G  N  D  T  A   : G  Y  Q  T  C  S  A  S  L  C  W  W  T  S  A  Y  C  K  *  T   : V  G  C  Y  L  L  *  S  C  H  V  C  N  R  R  K  Y  C  W  S  R :   G  C  C  C  Q  R  L  Y  K  P  *  E  E  V  C  L  C  *  N  E  I  C  *  G  S  *  *  C  N  G  F  G  W  C  H  F  *   : G  R  T  G  *  G  *  K  T  Q  *  L  Q  S  F  L  G  S  Y  T  W  S  *  S  T  E  P  Q  P  Q  P  G  S  C  W  I  D  T  R  F  F  R  R  A  *  R  T  *  P  Y  I  C  W  W  F  T  L  L  F  Y  R  I  T  N  Q  G  T  F  R  V  F  W  S  T  S  R  I  *  S  G  Q  R  *  R  N  W  E  F  K  R  L  C  F  L  C  V  P  G  C  L  C  Y  *  Y  C  L  C  S  S  *  W  D  *  D  G  G  *  N  S  Y  C  *  A  G  *  P  G  H  N  P  T  Q  P  *  A  R  E  C  I  V  A  C  T  T  A  D  S  F  A   : E  V  H  V  T  T  W  C  I  S  H  K  G  F  V  L  D  R  S  G  *  R  R  *  A  Q  R  *  *  *  L  S  R  Y  F  G  R  Y  E  D  *  M  W  *  I  W :   S  S  P  E  C  C  H  S  T  S  K  S  *  W  R  A  Y  T  W  T  R  E   : G  I  P  G  V  C  R  C  *  Q  F  Q  Q  S  S  P  R  A  E  W  K  K  I  W  W  *  P  S  Y  C  C  L  L  S  R  E  Q  V  L  *  G  R  L  R  G  L  T  V  T  T  I  A  V  T  *  Y  S  D  Y  Y  R  E  L  F  A  C  P  I  G  I  I  S  P  F  *  Q  R  L  L  V  S  C  L  F  F  F  C  F  F  V  L  V  S  M  G  Y  F  I  L  D  *  I  *  F  V  V  K  A  G  V  K  Y  Q  T  G  I  V  L  S  G  C  L  N  V  F  F  L  F  I  I  M  A </first_frame>
            <second_frame>  F  *  E  G  N  V  G  L  L  A  P  L  C  *  Q  W  A  *  A  D  F  C  S  L  Y  V  Q  G  R  I  D  T   : G  Q  V  P  G  T  T  N  P  S  I  P  G  M  F  S  N  M  F  P  L  A  A  G  Q  :  F  G  A  L  P  I  M  P  V  Q  A  M  T  Q  Q  :  A  T  R  H  A  R  R  V  Y  V  G  G  L  P  P  T  A  N  E  Q  :  S  V  A  T  F  F  S  H  V  M  Y  A  I  G  G  N  T  A  G  P   : G  D  A  V  V  N  V  Y  I  N  H  E  K  K  F  A  F  V  E  M  R  S  V  E  E  A  S  N  A  M  A  L  D  G  V  I  F  E  :  G  G  P  V  K  V  R  R  P  S  D  Y  N  P  S  L  A  A  T  L  G  P  S  Q  P  S  P  N  L  N  L  A  A  V  G  L  T  P  G  S  S  G  G  L  E  G  P  D  R  I  F  V  G  G  L  P  Y  Y  F  T  E  S  Q  I  R  E  L  L  E  S  F  G  Q  L  R  G  F  D  L  V  K  D  R  E  T  G  N  S  K  G  Y  A  F  C  V  Y  Q  D  V  S  V  T  D  I  A  C  A  A  L  N  G  I  K  M  G  D  K  T  L  T  V  R  R  A  N  Q  G  T  T  Q  P  N  P  E  Q  E  S  V  L  L  H  A  Q  Q  Q  I  A  L  Q  :  R  F  M  L  Q  P  G  A  L  A  T  K  V  L  C  L  T  E  V  V  S  V  D  E  L  K  D  D  D  D  Y  Q  D  I  L  E  D  M  R  I  E  C  G  K  F   : G  A  L  L  N  V  V  I  P  R  P  N  P  N  G  E  P  T  P  G  L  G  K  :  V  F  L  E  Y  A  D  V  D  S  S  S  K  A  R  Q  G  L  N  G  R  K  F  G  G  N  Q  V  I  A  V  F  Y  P  E  N  K  F  S  E  G  D  Y  E  A  *  L  *  P  L  *  L  *  H  N  I  Q  I  I  T  G  S  C  L  H  V  L  *  E  L  Y  P  P  F  D  K  D  Y  *  C  P  V  F  F  S  F  A  F  L  F  W  *  A  W  D  I  L  F  W  I  K  F  S  L  W  L  K  L  V  *  S  I  K  Q  E  *  C  Y  R  V  V  *  M  S  F  F  F  L  *  L  W   </second_frame>
            <third_frame>   S  K  K  A  M  L  G  Y  L  P  H  C  A  D  N  G  R  E  P  T  S  V  A  Y  M  Y  K  E  E  S  I  Q  :  V  K  F  L  G  P  L  T  H  Q  Y  L  E  C  F  L  T  C  F  L  *  Q  Q  A  S :   L  E  L  S  L  L  C  Q  S  R  Q  *  H  S  R :   L  P  D  M  L  G  E  F  M  L  V  D  F  R  L  L  Q  M  N  S :   R  L  L  P  S  L  V  M  S  C  M  Q  S  E  E  I  L  L  V  Q  :  G  M  L  L  S  T  F  I  *  T  M  R  R  S  L  P  L  L  K  *  D  L  L  R  K  L  V  M  Q  W  L  W  M  V  S  F  L  R :   A  D  R  L  R  L  E  D  P  V  I  T  I  L  P  W  Q  L  H  L  V  L  V  N  R  A  P  T  S  T  W  Q  L  L  D  *  H  Q  V  L  P  E  G  L  K  D  L  T  V  Y  L  L  V  V  Y  P  I  I  L  Q  N  H  K  S  G  N  F  *  S  L  L  V  N  F  E  D  L  I  W  S  K  I  E  K  L  G  I  Q  K  V  M  L  F  V  C  T  R  M  S  L  L  L  I  L  L  V  Q  L  L  M  G  L  R  W  G  I  K  L  L  L  L  G  G  L  T  R  A  Q  P  N  P  T  L  S  K  R  V  Y  C  C  M  H  N  S  R  *  L  C  R :   G  S  C  Y  N  L  V  H  *  P  Q  R  F  C  A  *  Q  K  W  L  A  *  M  S  S  K  M  M  M  T  I  K  I  F  W  K  I  *  G  L  N  V  V  N  L  :  E  L  S  *  M  L  S  F  H  V  Q  I  L  M  A  S  L  H  L  D  S  G  R :   Y  S  W  S  M  Q  M  L  T  V  P  A  K  L  A  K  G  *  M  E  E  N  L  V  V  T  K  L  L  L  S  S  I  Q  R  T  S  S  L  R  E  I  T  R  L  N  C  N  H  Y  S  C  D  I  I  F  R  L  L  Q  G  V  V  C  M  S  Y  R  N  Y  I  P  L  L  T  K  I  I  S  V  L  S  F  F  L  L  L  F  C  F  G  E  H  G  I  F  Y  S  G  L  N  L  V  C  G  *  S  W  C  K  V  S  N  R  N  S  V  I  G  L  F  E  C  L  F  S  F  Y  N  Y  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="162723" stop="162765"/>
                    <exon start="163007" stop="163080"/>
                    <exon start="163158" stop="163202"/>
                    <exon start="163289" stop="163348"/>
                    <exon start="164063" stop="164123"/>
                    <exon start="164212" stop="164324"/>
                    <exon start="164677" stop="165123"/>
                    <exon start="165230" stop="165365"/>
                    <exon start="165470" stop="165537"/>
                    <exon start="165842" stop="165979"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1182</number_coding_nucleotides>
                  <number_encoded_amino_acids>394</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ADFCSLYVQGRIDTGQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="160177" e_stop="160316"/>
            <exon e_start="160993" e_stop="161273"/>
            <exon e_start="161564" e_stop="161671"/>
            <exon e_start="162327" e_stop="162397"/>
            <exon e_start="162679" e_stop="162765"/>
            <exon e_start="163007" e_stop="163068"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.813" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.986" e_score="0.989"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="160177" e_stop="160316" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="160317" i_stop="160992" i_length="676"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="160993" e_stop="161273" e_length="281"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="1.000">
            <gDNA_intron_boundary i_start="161274" i_stop="161563" i_length="290"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="161564" e_stop="161671" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.813">
            <gDNA_intron_boundary i_start="161672" i_stop="162326" i_length="655"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="162327" e_stop="162397" e_length="71"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="162398" i_stop="162678" i_length="281"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="162679" e_stop="162765" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.956" acc_prob="0.986">
            <gDNA_intron_boundary i_start="162766" i_stop="163006" i_length="241"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="163007" e_stop="163068" e_length="62"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160177" stop="160316"/>
              <exon start="160993" stop="161273"/>
              <exon start="161564" stop="161578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160182" stop="160316"/>
              <exon start="160993" stop="161271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="160241" stop="160316"/>
              <exon start="160993" stop="161273"/>
              <exon start="161564" stop="161671"/>
              <exon start="162327" stop="162397"/>
              <exon start="162679" stop="162765"/>
              <exon start="163007" stop="163068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257326" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACTCATTTCTAGCCCTAGTTTTGTACTGAAGAGAAAAATTAGGGTAAAAACGTAGTGGAACGATGCAGGAATATGAAGGTAATGGAGAAGATATAGAGAATAATGGTTCTTCTCCTTACAGTGACTCCAAGTCTCAG : CATACTTCTCGTGACCCCGAGAAAGAAAGGGGCTCATCAAGAAGCAGGGAGAAGGAGAGGGAGAAAGGGCGTGATAAAGACCGGGACAGGGACAGGAATAGAGATAGAGATAGAGACAGGGACAGAGGTAAGGAAAGGGACAAAGATAGGGATAGGGACAGAGAGAGGGAGAAGGACCGTGATCGTCATCACAGAGATCGTCATAGGGATCGGAGTGATAGGAGGGAGAGGATCAGAGATCGAGATGAAGATGATCTTCAGCGAACTCGAGATTACGATAG : GCGAAGAGACAATGACAAAGATAGAGAGGACCGACAGAGACACAAGCCTAGCTCTAGGGGTAGATCCGAGCATAGATCAAGGTCTAGATCACGGTCACCATCTAAGAG : CAAAAGGATCAGTGGTTTTGATATGGCACCTCCCACCAGTGCATTGCTATCTGGCGCTACTGATGTTGCAG : GCAATGTTGGGCTACTTGCCCCACTGTGCTGACAATGGGCGTGAGCCGACTTCTGTAGCTTATATGTACAAGGAAGAATCGATACAG : GTCAAGTTCCTGGGACCACTAACCCATCAATACCTGGAATGTTTTCTAACATGTTTCCTCTA</gDNA_template>
            <first_frame> K  T  H  F  *  P  *  F  C  T  E  E  K  N  *  G  K  N  V  V  E  R  C  R  N  M  K  V  M  E  K  I  *  R  I  M  V  L  L  L  T  V  T  P  S  L  S :   I  L  L  V  T  P  R  K  K  G  A  H  Q  E  A  G  R  R  R  G  R  K  G  V  I  K  T  G  T  G  T  G  I  E  I  E  I  E  T  G  T  E  V  R  K  G  T  K  I  G  I  G  T  E  R  G  R  R  T  V  I  V  I  T  E  I  V  I  G  I  G  V  I  G  G  R  G  S  E  I  E  M  K  M  I  F  S  E  L  E  I  T  I   : G  E  E  T  M  T  K  I  E  R  T  D  R  D  T  S  L  A  L  G  V  D  P  S  I  D  Q  G  L  D  H  G  H  H  L  R   : A  K  G  S  V  V  L  I  W  H  L  P  P  V  H  C  Y  L  A  L  L  M  L  Q  :  A  M  L  G  Y  L  P  H  C  A  D  N  G  R  E  P  T  S  V  A  Y  M  Y  K  E  E  S  I  Q  :  V  K  F  L  G  P  L  T  H  Q  Y  L  E  C  F  L  T  C  F  L   </first_frame>
            <second_frame>  K  L  I  S  S  P  S  F  V  L  K  R  K  I  R  V  K  T  *  W  N  D  A  G  I  *  R  *  W  R  R  Y  R  E  *  W  F  F  S  L  Q  *  L  Q  V  S   : A  Y  F  S  *  P  R  E  R  K  G  L  I  K  K  Q  G  E  G  E  G  E  R  A  *  *  R  P  G  Q  G  Q  E  *  R  *  R  *  R  Q  G  Q  R  *  G  K  G  Q  R  *  G  *  G  Q  R  E  G  E  G  P  *  S  S  S  Q  R  S  S  *  G  S  E  *  *  E  G  E  D  Q  R  S  R  *  R  *  S  S  A  N  S  R  L  R  *  :  A  K  R  Q  *  Q  R  *  R  G  P  T  E  T  Q  A  *  L  *  G  *  I  R  A  *  I  K  V  *  I  T  V  T  I  *  E  :  Q  K  D  Q  W  F  *  Y  G  T  S  H  Q  C  I  A  I  W  R  Y  *  C  C  R :   Q  C  W  A  T  C  P  T  V  L  T  M  G  V  S  R  L  L  *  L  I  C  T  R  K  N  R  Y  R :   S  S  S  W  D  H  *  P  I  N  T  W  N  V  F  *  H  V  S  S  </second_frame>
            <third_frame>   N  S  F  L  A  L  V  L  Y  *  R  E  K  L  G  *  K  R  S  G  T  M  Q  E  Y  E  G  N  G  E  D  I  E  N  N  G  S  S  P  Y  S  D  S  K  S  Q  :  H  T  S  R  D  P  E  K  E  R  G  S  S  R  S  R  E  K  E  R  E  K  G  R  D  K  D  R  D  R  D  R  N  R  D  R  D  R  D  R  D  R  G  K  E  R  D  K  D  R  D  R  D  R  E  R  E  K  D  R  D  R  H  H  R  D  R  H  R  D  R  S  D  R  R  E  R  I  R  D  R  D  E  D  D  L  Q  R  T  R  D  Y  D  R :   R  R  D  N  D  K  D  R  E  D  R  Q  R  H  K  P  S  S  R  G  R  S  E  H  R  S  R  S  R  S  R  S  P  S  K  S :   K  R  I  S  G  F  D  M  A  P  P  T  S  A  L  L  S  G  A  T  D  V  A   : G  N  V  G  L  L  A  P  L  C  *  Q  W  A  *  A  D  F  C  S  L  Y  V  Q  G  R  I  D  T   : G  Q  V  P  G  T  T  N  P  S  I  P  G  M  F  S  N  M  F  P  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="160276" stop="160316"/>
                    <exon start="160993" stop="161273"/>
                    <exon start="161564" stop="161671"/>
                    <exon start="162327" stop="162397"/>
                    <exon start="162679" stop="162765"/>
                    <exon start="163007" stop="163066"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIMVLLLTVTPSLSILLVTPRKKGAHQEAGRRRGRKGVIKTGTGTGIEIEIETGTEVRKGTKIGIGTERGRRTVIVITEIVIGIGVIGGRGSEIEMKMIFSELEITIGEETMTKIERTDRDTSLALGVDPSIDQGLDHGHHLRAKGSVVLIWHLPPVHCYLALLMLQAMLGYLPHCADNGREPTSVAYMYKEESIQVKFLGPLTHQYLECFLTCFL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="160227" stop="160316"/>
                    <exon start="160993" stop="161273"/>
                    <exon start="161564" stop="161671"/>
                    <exon start="162327" stop="162397"/>
                    <exon start="162679" stop="162710"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>579</number_coding_nucleotides>
                  <number_encoded_amino_acids>193</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRSGTMQEYEGNGEDIENNGSSPYSDSKSQHTSRDPEKERGSSRSREKEREKGRDKDRDRDRNRDRDRDRDRGKERDKDRDRDREREKDRDRHHRDRHRDRSDRRERIRDRDEDDLQRTRDYDRRRDNDKDREDRQRHKPSSRGRSEHRSRSRSRSPSKSKRISGFDMAPPTSALLSGATDVAGNVGLLAPLC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="170761" PGL_stop="171476"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="170761" e_stop="171341"/>
            <exon e_start="171400" e_stop="171476"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="170761" e_stop="171341" e_length="581"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.000">
            <gDNA_intron_boundary i_start="171342" i_stop="171399" i_length="58"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="171400" e_stop="171476" e_length="77"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="170761" stop="171341"/>
              <exon start="171400" stop="171476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318077" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCACATTAAATTTCCTCTCTTTCTCTCTATTGATTTCCGAGCCGCCGACTTGCGTTGTCACAACTGCTTCTCATTTTCATCGAGTTTTTCTTCATTACTTTTACTTATAAGCAAACCCATTTACTCGAACTTAGCGACTTTCCCGGCAGAAAGTTCACGCCGGTGATTGACTTTCTGGTGATTTTGGAATCTGGGTTTTTCAGCTAATTTCTATGTTATGGGGATTTGCTATTTTAGCTTGGTTTGATCAAAACTGGTAGTTGGGTGTATGAAAGAAAGAAAAACGAAAAAGCAAGATTGACTGGTAGATACGGCGAAAAGAGAGAAAGTATTGACTCCCCCAAGAAAAGATTGATATCAAAAAGGTTTTTTTAACATAAATGTTCTAAAGATTTGCTTTTTTGAGCAACCCCCCCCCCCCAAAAAAAAAAAAAAAAACATGCCGGCCGACCCAGATAACTCATCCGCCATGAACGATTCTACAGGCTCAGGTGAAGCAAGCGTTTCGTCTTCAGGTAATCAAGTAGTTCCTCTGAAAGAATCAGCCAAGAAGAAACGGAATCTTCCTGGGATGCCAG : ATTTGATTTTCTGTTTTTGGTTGCTTTGATTAGATCCCGATGCAGAGGTTATTGCTTTGTCACCAACAACTTTGCTG</gDNA_template>
            <first_frame> F  S  H  *  I  S  S  L  S  L  Y  *  F  P  S  R  R  L  A  L  S  Q  L  L  L  I  F  I  E  F  F  F  I  T  F  T  Y  K  Q  T  H  L  L  E  L  S  D  F  P  G  R  K  F  T  P  V  I  D  F  L  V  I  L  E  S  G  F  F  S  *  F  L  C  Y  G  D  L  L  F  *  L  G  L  I  K  T  G  S  W  V  Y  E  R  K  K  N  E  K  A  R  L  T  G  R  Y  G  E  K  R  E  S  I  D  S  P  K  K  R  L  I  S  K  R  F  F  *  H  K  C  S  K  D  L  L  F  *  A  T  P  P  P  Q  K  K  K  K  K  H  A  G  R  P  R  *  L  I  R  H  E  R  F  Y  R  L  R  *  S  K  R  F  V  F  R  *  S  S  S  S  S  E  R  I  S  Q  E  E  T  E  S  S  W  D  A  R :   F  D  F  L  F  L  V  A  L  I  R  S  R  C  R  G  Y  C  F  V  T  N  N  F  A  </first_frame>
            <second_frame>  F  H  I  K  F  P  L  F  L  S  I  D  F  R  A  A  D  L  R  C  H  N  C  F  S  F  S  S  S  F  S  S  L  L  L  L  I  S  K  P  I  Y  S  N  L  A  T  F  P  A  E  S  S  R  R  *  L  T  F  W  *  F  W  N  L  G  F  S  A  N  F  Y  V  M  G  I  C  Y  F  S  L  V  *  S  K  L  V  V  G  C  M  K  E  R  K  T  K  K  Q  D  *  L  V  D  T  A  K  R  E  K  V  L  T  P  P  R  K  D  *  Y  Q  K  G  F  F  N  I  N  V  L  K  I  C  F  F  E  Q  P  P  P  P  K  K  K  K  K  N  M  P  A  D  P  D  N  S  S  A  M  N  D  S  T  G  S  G  E  A  S  V  S  S  S  G  N  Q  V  V  P  L  K  E  S  A  K  K  K  R  N  L  P  G  M  P   : D  L  I  F  C  F  W  L  L  *  L  D  P  D  A  E  V  I  A  L  S  P  T  T  L  L </second_frame>
            <third_frame>   F  T  L  N  F  L  S  F  S  L  L  I  S  E  P  P  T  C  V  V  T  T  A  S  H  F  H  R  V  F  L  H  Y  F  Y  L  *  A  N  P  F  T  R  T  *  R  L  S  R  Q  K  V  H  A  G  D  *  L  S  G  D  F  G  I  W  V  F  Q  L  I  S  M  L  W  G  F  A  I  L  A  W  F  D  Q  N  W  *  L  G  V  *  K  K  E  K  R  K  S  K  I  D  W  *  I  R  R  K  E  R  K  Y  *  L  P  Q  E  K  I  D  I  K  K  V  F  L  T  *  M  F  *  R  F  A  F  L  S  N  P  P  P  P  K  K  K  K  K  T  C  R  P  T  Q  I  T  H  P  P  *  T  I  L  Q  A  Q  V  K  Q  A  F  R  L  Q  V  I  K  *  F  L  *  K  N  Q  P  R  R  N  G  I  F  L  G  C  Q  :  I  *  F  S  V  F  G  C  F  D  *  I  P  M  Q  R  L  L  L  C  H  Q  Q  L  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="171119" stop="171341"/>
                    <exon start="171400" stop="171428"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YQKGFFNINVLKICFFEQPPPPKKKKKNMPADPDNSSAMNDSTGSGEASVSSSGNQVVPLKESAKKKRNLPGMPDLIFCFWLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="172140" PGL_stop="173094"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="172140" e_stop="172186"/>
            <exon e_start="172649" e_stop="173094"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.984" e_score="0.979"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="172140" e_stop="172186" e_length="47"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.984">
            <gDNA_intron_boundary i_start="172187" i_stop="172648" i_length="462"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="172649" e_stop="173094" e_length="446"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="172140" stop="172186"/>
              <exon start="172649" stop="173094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="172143" stop="172186"/>
              <exon start="172649" stop="173006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476388" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCGTCAACTGCCGTAATGTCATTTGCTTCCTCCGTTCAAAATCGAG : AATTGCGGGAGAATCCAGTCACAAATTCTGCTGGAGCTGCTACGAAGCAAGTTGTGGAGGAAGCAGCAGTGGTAGCAAGCTTGACTGGAAACTGTAGCAGCTCTTGTAGTAATGGAAGTAGTAGCAGCAATGTCTTTGGAAGTTTGTTTGCTTCATCAACAGCTTCGGGAAGTCTGCCATCTCAAGCTCCTGTTTTTTCTGATATATTTCGAGCCATGGCGCCTGAGCACACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGCCTAGCGATGAGTCACAGTTCGTCAATTTTTAGACCAGCTGGTCAAGAACGGAGGCAATATGCTCCCGCACCACAACCAGCTATGTCGGCAACAGCATTACTGCAGAAGGCAGCTCAGATGGGTGCAGCAGCAACCAGCTCATCGTTCTTGAGGGGCATTGGGGTTATG</gDNA_template>
            <first_frame> T  V  N  C  R  N  V  I  C  F  L  R  S  K  S  R :   I  A  G  E  S  S  H  K  F  C  W  S  C  Y  E  A  S  C  G  G  S  S  S  G  S  K  L  D  W  K  L  *  Q  L  L  *  *  W  K  *  *  Q  Q  C  L  W  K  F  V  C  F  I  N  S  F  G  K  S  A  I  S  S  S  C  F  F  *  Y  I  S  S  H  G  A  *  A  H  S  *  D  G  T  T  F  I  Y  R  T  N  I  S  R  P  S  D  E  S  Q  F  V  N  F  *  T  S  W  S  R  T  E  A  I  C  S  R  T  T  T  S  Y  V  G  N  S  I  T  A  E  G  S  S  D  G  C  S  S  N  Q  L  I  V  L  E  G  H  W  G  Y  </first_frame>
            <second_frame>  P  S  T  A  V  M  S  F  A  S  S  V  Q  N  R   : E  L  R  E  N  P  V  T  N  S  A  G  A  A  T  K  Q  V  V  E  E  A  A  V  V  A  S  L  T  G  N  C  S  S  S  C  S  N  G  S  S  S  S  N  V  F  G  S  L  F  A  S  S  T  A  S  G  S  L  P  S  Q  A  P  V  F  S  D  I  F  R  A  M  A  P  E  H  T  L  E  M  A  P  P  S  S  T  E  P  I  S  L  G  L  A  M  S  H  S  S  S  I  F  R  P  A  G  Q  E  R  R  Q  Y  A  P  A  P  Q  P  A  M  S  A  T  A  L  L  Q  K  A  A  Q  M  G  A  A  A  T  S  S  S  F  L  R  G  I  G  V  M </second_frame>
            <third_frame>   R  Q  L  P  *  C  H  L  L  P  P  F  K  I  E  :  N  C  G  R  I  Q  S  Q  I  L  L  E  L  L  R  S  K  L  W  R  K  Q  Q  W  *  Q  A  *  L  E  T  V  A  A  L  V  V  M  E  V  V  A  A  M  S  L  E  V  C  L  L  H  Q  Q  L  R  E  V  C  H  L  K  L  L  F  F  L  I  Y  F  E  P  W  R  L  S  T  L  L  R  W  H  H  L  H  L  Q  N  Q  Y  L  S  A  *  R  *  V  T  V  R  Q  F  L  D  Q  L  V  K  N  G  G  N  M  L  P  H  H  N  Q  L  C  R  Q  Q  H  Y  C  R  R  Q  L  R  W  V  Q  Q  Q  P  A  H  R  S  *  G  A  L  G  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="+"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="172141" stop="172186"/>
                    <exon start="172649" stop="173094"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSTAVMSFASSVQNRELRENPVTNSAGAATKQVVEEAAVVASLTGNCSSSCSNGSSSSNVFGSLFASSTASGSLPSQAPVFSDIFRAMAPEHTLEMAPPSSTEPISLGLAMSHSSSIFRPAGQERRQYAPAPQPAMSATALLQKAAQMGAAATSSSFLRGIGVM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="173260" PGL_stop="173862"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="173260" e_stop="173862"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="173260" e_stop="173862" e_length="603"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="173260" stop="173862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="173261" stop="173862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286333" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="173272" stop="173862"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540141" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCACTCTTGACCTCCTTGGATTAGGAATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTTTAACATCCATGGGTAGCAATCTTGACATGGTGACTTCAGCTGGATCATTTGGTAGTGCAGATTTCAGTGGGAAAGACTTGGGAAGAAATTCATGATATCTTAGAGTCAGGTTTAATTTATTCTGTATAGGACAATGAATTTCACTTGATGCAGCAAAAAACATATTGGCAAGCTCTCAGCCCCAAAGATTTGAGCATAGGATGGCAGGAGGAAAGAAGGCAGTTGGACACTTTTAAGATTGTTCTACTGTCTCCTTTGTGTAGGAAAAGTAGAAAGGTTTTTTTTCTGCTGTACAGTAGAAGTTGAATGTATAGCTGTATTAAAACTCCTCTGCTTTTTGTTACAGATGAAGCTGTTAATGTGTTTAGTATATAATTTGCTATAAGCATATTTAACCAAGAGAGGCTCATCTAGTGGGAATTTTTATCAAATGGTATCTCTATTTCAGACAGTGCAAATTTTTATAAAATTTGTATAATTCAGATGCATAACTAATGCAGCAGTGTTAAACTCTTTGAGCAAAAAAGTTTAAA</gDNA_template>
            <first_frame> P  T  L  D  L  L  G  L  G  M  A  A  S  V  G  P  S  P  G  L  S  A  L  L  T  S  M  G  S  N  L  D  M  V  T  S  A  G  S  F  G  S  A  D  F  S  G  K  D  L  G  R  N  S  *  Y  L  R  V  R  F  N  L  F  C  I  G  Q  *  I  S  L  D  A  A  K  N  I  L  A  S  S  Q  P  Q  R  F  E  H  R  M  A  G  G  K  K  A  V  G  H  F  *  D  C  S  T  V  S  F  V  *  E  K  *  K  G  F  F  S  A  V  Q  *  K  L  N  V  *  L  Y  *  N  S  S  A  F  C  Y  R  *  S  C  *  C  V  *  Y  I  I  C  Y  K  H  I  *  P  R  E  A  H  L  V  G  I  F  I  K  W  Y  L  Y  F  R  Q  C  K  F  L  *  N  L  Y  N  S  D  A  *  L  M  Q  Q  C  *  T  L  *  A  K  K  F  K </first_frame>
            <second_frame>  P  L  L  T  S  L  D  *  E  W  Q  L  V  S  V  H  R  L  D  Y  L  P  F  *  H  P  W  V  A  I  L  T  W  *  L  Q  L  D  H  L  V  V  Q  I  S  V  G  K  T  W  E  E  I  H  D  I  L  E  S  G  L  I  Y  S  V  *  D  N  E  F  H  L  M  Q  Q  K  T  Y  W  Q  A  L  S  P  K  D  L  S  I  G  W  Q  E  E  R  R  Q  L  D  T  F  K  I  V  L  L  S  P  L  C  R  K  S  R  K  V  F  F  L  L  Y  S  R  S  *  M  Y  S  C  I  K  T  P  L  L  F  V  T  D  E  A  V  N  V  F  S  I  *  F  A  I  S  I  F  N  Q  E  R  L  I  *  W  E  F  L  S  N  G  I  S  I  S  D  S  A  N  F  Y  K  I  C  I  I  Q  M  H  N  *  C  S  S  V  K  L  F  E  Q  K  S  L   </second_frame>
            <third_frame>   H  S  *  P  P  W  I  R  N  G  S  *  C  R  S  I  A  W  I  I  C  P  F  N  I  H  G  *  Q  S  *  H  G  D  F  S  W  I  I  W  *  C  R  F  Q  W  E  R  L  G  K  K  F  M  I  S  *  S  Q  V  *  F  I  L  Y  R  T  M  N  F  T  *  C  S  K  K  H  I  G  K  L  S  A  P  K  I  *  A  *  D  G  R  R  K  E  G  S  W  T  L  L  R  L  F  Y  C  L  L  C  V  G  K  V  E  R  F  F  F  C  C  T  V  E  V  E  C  I  A  V  L  K  L  L  C  F  L  L  Q  M  K  L  L  M  C  L  V  Y  N  L  L  *  A  Y  L  T  K  R  G  S  S  S  G  N  F  Y  Q  M  V  S  L  F  Q  T  V  Q  I  F  I  K  F  V  *  F  R  C  I  T  N  A  A  V  L  N  S  L  S  K  K  V  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0128E12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="-" PGL_start="178276" PGL_stop="177515"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="178276" e_stop="177515"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="178276" e_stop="177515" e_length="762"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="178276" stop="177515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="178148" stop="177599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAAAGAGAGGCAGAGCAAGCAAGGAGAGAAGAGGAAGAAGCAGAAAAAAGAAGGCAGGAGGAGGAAGAATCAAGGAGAGAGGAGAAAGCAAGAAGAAGGCAACAGGAGGAAGCAAGGAGGAGAGAGGAGGAAGAAGCAGCAAAAAGGCAACATGAGGAAGAAGCAGAGAGAGAGGCAGAGGAAGCAAGAAGGATAGAGGAGGAAGAAGCACAAAGAGAGGCAGAAGAAGCAAGGAGAATACAACAGGAGGAAGAAGCAGAGAGAGCAAGGAGAAGAGAAGAAGAAGCAGAAACAAGAAGGAAGGAGGAGGAGGAGGAAGAATCAAGGAGACAAGAGGAGGAATCAAGGAGGAGTGAAGAAGAGGCAGCAAGAGAGGCAGAGAGGGAAAGGCAAGAGGAAGCTGAAAGACAAGAAGAAGCTAGGAGACGGGAGGAAGAAACAGAAGAGAGGCATCAACAAGAAGAAACCGAGGAAGAGGAGCCAGGCCAACCTGAAATGAACGGATATTCCTCAAACTAGCCTATGAGTGTGTTGTGTAACTAGTGTACTCAGCAAGTTCTCAGGAGCTGAATAGTCTCTACGTTTTTGTATAATCTCATGTGTGTGTACGTCTTTTCATTTACTTTTGCTGTCATATTTATGAGTTTATGTAATAACACCGAAACAAGTTTTCATAGATCACTTTTCCCTGGCAAGTCTCCAGCAATGTAGCAGAAGGTGTTAGGATGTTATCTGGATGAAAGCAGTTCATACATTTAAAT</gDNA_template>
            <first_frame> T  K  R  G  R  A  S  K  E  R  R  G  R  S  R  K  K  K  A  G  G  G  R  I  K  E  R  G  E  S  K  K  K  A  T  G  G  S  K  E  E  R  G  G  R  S  S  K  K  A  T  *  G  R  S  R  E  R  G  R  G  S  K  K  D  R  G  G  R  S  T  K  R  G  R  R  S  K  E  N  T  T  G  G  R  S  R  E  S  K  E  K  R  R  R  S  R  N  K  K  E  G  G  G  G  G  R  I  K  E  T  R  G  G  I  K  E  E  *  R  R  G  S  K  R  G  R  E  G  K  A  R  G  S  *  K  T  R  R  S  *  E  T  G  G  R  N  R  R  E  A  S  T  R  R  N  R  G  R  G  A  R  P  T  *  N  E  R  I  F  L  K  L  A  Y  E  C  V  V  *  L  V  Y  S  A  S  S  Q  E  L  N  S  L  Y  V  F  V  *  S  H  V  C  V  R  L  F  I  Y  F  C  C  H  I  Y  E  F  M  *  *  H  R  N  K  F  S  *  I  T  F  P  W  Q  V  S  S  N  V  A  E  G  V  R  M  L  S  G  *  K  Q  F  I  H  L  N </first_frame>
            <second_frame>  Q  R  E  A  E  Q  A  R  R  E  E  E  E  A  E  K  R  R  Q  E  E  E  E  S  R  R  E  E  K  A  R  R  R  Q  Q  E  E  A  R  R  R  E  E  E  E  A  A  K  R  Q  H  E  E  E  A  E  R  E  A  E  E  A  R  R  I  E  E  E  E  A  Q  R  E  A  E  E  A  R  R  I  Q  Q  E  E  E  A  E  R  A  R  R  R  E  E  E  A  E  T  R  R  K  E  E  E  E  E  E  S  R  R  Q  E  E  E  S  R  R  S  E  E  E  A  A  R  E  A  E  R  E  R  Q  E  E  A  E  R  Q  E  E  A  R  R  R  E  E  E  T  E  E  R  H  Q  Q  E  E  T  E  E  E  E  P  G  Q  P  E  M  N  G  Y  S  S  N  *  P  M  S  V  L  C  N  *  C  T  Q  Q  V  L  R  S  *  I  V  S  T  F  L  Y  N  L  M  C  V  Y  V  F  S  F  T  F  A  V  I  F  M  S  L  C  N  N  T  E  T  S  F  H  R  S  L  F  P  G  K  S  P  A  M  *  Q  K  V  L  G  C  Y  L  D  E  S  S  S  Y  I  *   </second_frame>
            <third_frame>   K  E  R  Q  S  K  Q  G  E  K  R  K  K  Q  K  K  E  G  R  R  R  K  N  Q  G  E  R  R  K  Q  E  E  G  N  R  R  K  Q  G  G  E  R  R  K  K  Q  Q  K  G  N  M  R  K  K  Q  R  E  R  Q  R  K  Q  E  G  *  R  R  K  K  H  K  E  R  Q  K  K  Q  G  E  Y  N  R  R  K  K  Q  R  E  Q  G  E  E  K  K  K  Q  K  Q  E  G  R  R  R  R  R  K  N  Q  G  D  K  R  R  N  Q  G  G  V  K  K  R  Q  Q  E  R  Q  R  G  K  G  K  R  K  L  K  D  K  K  K  L  G  D  G  R  K  K  Q  K  R  G  I  N  K  K  K  P  R  K  R  S  Q  A  N  L  K  *  T  D  I  P  Q  T  S  L  *  V  C  C  V  T  S  V  L  S  K  F  S  G  A  E  *  S  L  R  F  C  I  I  S  C  V  C  T  S  F  H  L  L  L  L  S  Y  L  *  V  Y  V  I  T  P  K  Q  V  F  I  D  H  F  S  L  A  S  L  Q  Q  C  S  R  R  C  *  D  V  I  W  M  K  A  V  H  T  F  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0128E12.1" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="178275" stop="177757"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QREAEQARREEEEAEKRRQEEEESRREEKARRRQQEEARRREEEEAAKRQHEEEAEREAEEARRIEEEEAQREAEEARRIQQEEEAERARRREEEAETRRKEEEEEESRRQEEESRRSEEEAAREAERERQEEAERQEEARRREEETEERHQQEETEEEEPGQPEMNGYSSN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 401 chains have been computed
$ 
$ memory statistics:
$ 3889096 bytes spliced alignments in total
$ 265 spliced alignments have been stored
$ 14675 bytes was the average size of a spliced alignment
$ 50504 bytes predicted gene locations in total
$ 29 predicted gene locations have been stored
$ 1741 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 456 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 12:07:08
-->
