<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 23:52:17"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312955" ref_strand="+" ref_description="SGN-E312955 [cTOA-14-M19]">
      <seq>tctcctataacacatccgccactctattttactctataaatactctatctttcaattttaaccacatttcaaatttcagaatctaatccttcatcgctcctcttcaatttcagactagcagaaacactttccgcacggtgtttcagaatctaaacaatcatcgatctctgctttaatttcaggtggtcttgttctagacagatgccagggaacaagtataccggcaaccaagcggttgctagcactcgattggagaggctattgagagaaagagagcttaggaaaagtagcaaagtttctcactttccaaatgaatctactgataacaataggggaaacgagctctctgaccatgattttcgccaaggagaagctgataatggaggagtttcatatgtcgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="1" stop="4126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90" g_stop="202" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="203" i_stop="317" i_length="115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="318" g_stop="386" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="182" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="387" i_stop="3604" i_length="3218">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.802" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3605" g_stop="3826" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="404" r_length="222" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E312955" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90" e_stop="202"/>
          <exon e_start="318" e_stop="386"/>
          <exon e_start="3605" e_stop="3826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCTATAACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAGGTATATATATATGTATACTTCTTCTGTAATCCATCCGATGTTTAATTTGTTGCATTCAATTTTTTCATGATTGAGTAATCTGGATTTGAATTTGCAATCGCAAAATCGGTTGCAGACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAGGTACGTTTTTCATTTTTTTTTCTCCGTTCTGGAATCTGCCGATTGTTGATGATGTTTATCTATCTATATGCATGAAATTTATCACGAAATCGCTGAAATTCTGGTTGTTATAAGCAGTTTGCTATATATATATATTCTGTTTGTACGATTTTTGGATGAAGTTTTATATATATACTATATATAGATATAGATATCGTTGAACGTGAAATAGAAAAGAATTGCTTGGTCAGATCTAGATAGTAAATTTTTGAATTTTGAGGAGAGTACAAATGGAAGTGTATCTGCAAGGTGACGTAAAAAAGGTGCACTGGTAGTCCGCCACTCCATCCTGAATGCAGGAGCTGTACTGTTGTGTTTGCCCACTCAACTTGCCAAATTTCAAAAGCATGAAAAATTGGTAAACGAAACATTTTATTAAGAAATAAAATAATATTAACATAACAAACTAGATATTTTTTAGTCTTACTTGCTTATGTGGATTGTAGAATTTTTTTTAAAAAACGTTAAATTCACTCTAAGTCCTTTATTTTTATTTTTTTTGGTAAAAATGTAAAGTCCTTTAATTCATTTTTTTTATATAAAATATATTGAAAAATTATAGTCAAAAATAAAAGTGACGCATAAATACAAACGGACGGAGGTTGAAATTTATAACTTATGGGTGGAAAATTTTTTCCACTTTTTTGGAAAATAAGTACTTTTCATATTTAGTTTCAATTTTATCTCAAAAATATTATGACAGGGATAGGATGGTCTAAGGATATAAAATATTACTTTGTTTTCTCTGGAACTTGAAAATACTTTATGAAAATTATATTTCGTTATACCAACTCACCTTATATTAGAGTTTACATTTATATCTTATATATATATATATATATATATATTTAAATACTAATATAAAGTCTAGATAAAAATTATTATGTTCGTCTGAATCCAGACCTAATATTATAATTTAGGATTTCCCTTATAATTTCATTCAAGAAATTAATCTGTAAATGTCACCTTTCACTTTATTTTCCACTATACTGTTGCAAAAGAGAGAAATCAGAAAAGCTTGTGAATTTTATTTTGTTGTTGCTCTTATTGTTATTTTTTTTTGAAAAGATTCGGTTAGTTATGAGGATTGATGTGAACGCTAACCTCGTGAATCATAAATATTAAACCCACATTGATTCCGTTGTTATATATACAGCTCATCATACACACAAATTTTGTAATATCTCATTTTAATTTATTTATCCAATTTTAAAAAATTAAAATGTTATAATATCATTTCATACTGTCAAAGTATTTTTACTTGGTATAACGAATTATTATTGTTATCGACTCTTTGTCTTTGTGTCATTTAAATATGTGTTGAAACTTTTACTAACAATTATGATTATGTTGAGAATTTTTAGAAGCCTCATACTTTGCTGGACCCACCTTGTATAGGTTGGTGAGACAACGCTATATTAATATGGGTCCCTAATGCCTTATACAAAGGAAAATCATATTCTAGATTCCTTCTCAGATATTTAAAACAAAGGATTATTTTTTTATATACAAACACAAGGCAGTTCATTGCAAAATTCCACAGATTGTGAAAATAATAAAAAGCTTTTCGATATATAGTAAGTAAAGTAAATTAAATTTTTTTTGTTACTGTTTGTTTGTTTGCTTTTTTTTTTAATATTAGTTATGCCTTATTACTTGTCCGTTTTGACAAATCAAGAAATGATAATTTTTTTTTACCTATTATATCCTCAATTAATTATTTTAAAAAGGTAATTTTTTTTTGTTCTTATTAATAGATGTATCAATTCAATAATGGATAAGTAGATTTTCATAAATAAAATATGAGTATCTCTTGAGGCGTCGTATTAATAAATCATGTATCTTCAAATTTCTTTTAATAAATAATTTTATAAAGATTCAATAATAGTAATAACTAATTATTCTTTAATATAATTTTTTTATTTTTTTTATTTAAGTTTTGTAAAATTTAAAGGTATAAATCTTTCTTTTTACAACATATAAATTTATGATGAAGCTTTACATTTTTATACGGCTGATTATCTACTTTGTTTATTAAAGGTTTATCCCAAAATAATAAAATAACAAAAAATATAACATTAATCAAAATTAAAATTAATGATAATGATGGAGAATTAAAATTCGAGGTGGGCTAGATAGATGAGTAATTTTAGATTAATTCCAGGAATGTGCAGTCCGCGCAGCCTTTGAGGCCTTTTAAAAATAGGAATCTGAAAAAATAAAAAATCTGTGTGTCAGCTGCATGGCTGTAAGGCTTTATGCACCTTTTAAAGCTTACACGAGGATTCGTCTGCTCTTCCACTTCCCCTCTTTAGCTATGATAATAATTCCTCTGCCACCCGGTATTATCGATTTGCTCTCACAAATTCATCATCAAATGCTACTAATTTTTAATAATTACTCATAATTATTGTTGTGATCAAGCTTTTCCGGCCGGTTATCGATGTTGAGATCAGATTAGGCCAGGAATCCTTCCCCTTGTTTTTCACATCGGTTTTACAGGTAATTTGACACAGTCTGGATTTGATTTACCGTGGTTTCTGAAATGGGTTAATTAGCTGTCACAGAAATCTCTGTGCCTGTGTTCTTTTACAGCTTTCTCAATGAATTCGGGGTTTGGTTTTCTGCATGCAATGTGTTTGTGCCGGTGTCCGCTTTGAATCTGATAGCTGTTCTTTTTAATCTGGTGGGTCTTTATATGTTCGCACTTGCCTCATTGTATTTTGCTTGAACTGAAACTGGGATACCAAATGAATTTATATTTAAAATCCTGGACAGAAAAAGCCAAGACTCTTGGGGTGGTAGACCCCATTTCCCTAGAGAATTCTGTGGATCCCATTCTCCACACGTTATCTCTTTCTTAGTTTAAATCCTTTTTCTCTCTAGTACTACTGATTTTCAATAATTTTAAGTATTGGATTTATATGGGTCTAAATGGAGTGACATGGTTAGTGAAGTGGTGTTATTGTTGTAGTGGTTTATTCAACTAGGATGCTGATGTCCTATTCATTTATGTTAGCCTTGGCTGTGAAATTGCATTTTCACTGTTTGTACTTGAGGCTATTGTGGAATTGTATAAGTTTTTATATAATTCACGCGGGAGTTTCATCTTTTGTTACCTCTTATTATGAAAGATGGTTGTTTCCAGGGACATCATAACTCTATTAAATTCATCATAGGTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACA</genome_strand>
        <mrna_strand>TCTCCTATAACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAG...................................................................................................................ACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E394102" ref_strand="+" ref_description="SGN-E394102 [TUS-40-J9]">
      <seq>aacacatccgccactctattttactctataaatactctatctttcaattttaaccacatttcaaatttcagaatctaatccttcatcgctcctcttcaatttcagactagcagaaacactttccgcacggtgtttcagaatctaaacaatcatcgatctctgctttaatttcaggtggtcttgttctagacagatgccagggaacaagtataccggcaaccaagcggttgctagcactcgattggagaggctattgagagaaagagagcttaggaaaagtagcaaagtttctcactttccaaatgaatctactgataacaataggggaaacgagctctctgaccatgattttcgccaaggagaagctgataatggaggagtttcatatgtcgaacagtacctcgaaggagctgcactagcgtataatgaaggatgggagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="1" stop="4171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98" g_stop="202" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="203" i_stop="317" i_length="115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="318" g_stop="386" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="174" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="387" i_stop="3604" i_length="3218">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.802" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3605" g_stop="3871" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="441" r_length="267" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E394102" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98" e_stop="202"/>
          <exon e_start="318" e_stop="386"/>
          <exon e_start="3605" e_stop="3871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAGGTATATATATATGTATACTTCTTCTGTAATCCATCCGATGTTTAATTTGTTGCATTCAATTTTTTCATGATTGAGTAATCTGGATTTGAATTTGCAATCGCAAAATCGGTTGCAGACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAGGTACGTTTTTCATTTTTTTTTCTCCGTTCTGGAATCTGCCGATTGTTGATGATGTTTATCTATCTATATGCATGAAATTTATCACGAAATCGCTGAAATTCTGGTTGTTATAAGCAGTTTGCTATATATATATATTCTGTTTGTACGATTTTTGGATGAAGTTTTATATATATACTATATATAGATATAGATATCGTTGAACGTGAAATAGAAAAGAATTGCTTGGTCAGATCTAGATAGTAAATTTTTGAATTTTGAGGAGAGTACAAATGGAAGTGTATCTGCAAGGTGACGTAAAAAAGGTGCACTGGTAGTCCGCCACTCCATCCTGAATGCAGGAGCTGTACTGTTGTGTTTGCCCACTCAACTTGCCAAATTTCAAAAGCATGAAAAATTGGTAAACGAAACATTTTATTAAGAAATAAAATAATATTAACATAACAAACTAGATATTTTTTAGTCTTACTTGCTTATGTGGATTGTAGAATTTTTTTTAAAAAACGTTAAATTCACTCTAAGTCCTTTATTTTTATTTTTTTTGGTAAAAATGTAAAGTCCTTTAATTCATTTTTTTTATATAAAATATATTGAAAAATTATAGTCAAAAATAAAAGTGACGCATAAATACAAACGGACGGAGGTTGAAATTTATAACTTATGGGTGGAAAATTTTTTCCACTTTTTTGGAAAATAAGTACTTTTCATATTTAGTTTCAATTTTATCTCAAAAATATTATGACAGGGATAGGATGGTCTAAGGATATAAAATATTACTTTGTTTTCTCTGGAACTTGAAAATACTTTATGAAAATTATATTTCGTTATACCAACTCACCTTATATTAGAGTTTACATTTATATCTTATATATATATATATATATATATATTTAAATACTAATATAAAGTCTAGATAAAAATTATTATGTTCGTCTGAATCCAGACCTAATATTATAATTTAGGATTTCCCTTATAATTTCATTCAAGAAATTAATCTGTAAATGTCACCTTTCACTTTATTTTCCACTATACTGTTGCAAAAGAGAGAAATCAGAAAAGCTTGTGAATTTTATTTTGTTGTTGCTCTTATTGTTATTTTTTTTTGAAAAGATTCGGTTAGTTATGAGGATTGATGTGAACGCTAACCTCGTGAATCATAAATATTAAACCCACATTGATTCCGTTGTTATATATACAGCTCATCATACACACAAATTTTGTAATATCTCATTTTAATTTATTTATCCAATTTTAAAAAATTAAAATGTTATAATATCATTTCATACTGTCAAAGTATTTTTACTTGGTATAACGAATTATTATTGTTATCGACTCTTTGTCTTTGTGTCATTTAAATATGTGTTGAAACTTTTACTAACAATTATGATTATGTTGAGAATTTTTAGAAGCCTCATACTTTGCTGGACCCACCTTGTATAGGTTGGTGAGACAACGCTATATTAATATGGGTCCCTAATGCCTTATACAAAGGAAAATCATATTCTAGATTCCTTCTCAGATATTTAAAACAAAGGATTATTTTTTTATATACAAACACAAGGCAGTTCATTGCAAAATTCCACAGATTGTGAAAATAATAAAAAGCTTTTCGATATATAGTAAGTAAAGTAAATTAAATTTTTTTTGTTACTGTTTGTTTGTTTGCTTTTTTTTTTAATATTAGTTATGCCTTATTACTTGTCCGTTTTGACAAATCAAGAAATGATAATTTTTTTTTACCTATTATATCCTCAATTAATTATTTTAAAAAGGTAATTTTTTTTTGTTCTTATTAATAGATGTATCAATTCAATAATGGATAAGTAGATTTTCATAAATAAAATATGAGTATCTCTTGAGGCGTCGTATTAATAAATCATGTATCTTCAAATTTCTTTTAATAAATAATTTTATAAAGATTCAATAATAGTAATAACTAATTATTCTTTAATATAATTTTTTTATTTTTTTTATTTAAGTTTTGTAAAATTTAAAGGTATAAATCTTTCTTTTTACAACATATAAATTTATGATGAAGCTTTACATTTTTATACGGCTGATTATCTACTTTGTTTATTAAAGGTTTATCCCAAAATAATAAAATAACAAAAAATATAACATTAATCAAAATTAAAATTAATGATAATGATGGAGAATTAAAATTCGAGGTGGGCTAGATAGATGAGTAATTTTAGATTAATTCCAGGAATGTGCAGTCCGCGCAGCCTTTGAGGCCTTTTAAAAATAGGAATCTGAAAAAATAAAAAATCTGTGTGTCAGCTGCATGGCTGTAAGGCTTTATGCACCTTTTAAAGCTTACACGAGGATTCGTCTGCTCTTCCACTTCCCCTCTTTAGCTATGATAATAATTCCTCTGCCACCCGGTATTATCGATTTGCTCTCACAAATTCATCATCAAATGCTACTAATTTTTAATAATTACTCATAATTATTGTTGTGATCAAGCTTTTCCGGCCGGTTATCGATGTTGAGATCAGATTAGGCCAGGAATCCTTCCCCTTGTTTTTCACATCGGTTTTACAGGTAATTTGACACAGTCTGGATTTGATTTACCGTGGTTTCTGAAATGGGTTAATTAGCTGTCACAGAAATCTCTGTGCCTGTGTTCTTTTACAGCTTTCTCAATGAATTCGGGGTTTGGTTTTCTGCATGCAATGTGTTTGTGCCGGTGTCCGCTTTGAATCTGATAGCTGTTCTTTTTAATCTGGTGGGTCTTTATATGTTCGCACTTGCCTCATTGTATTTTGCTTGAACTGAAACTGGGATACCAAATGAATTTATATTTAAAATCCTGGACAGAAAAAGCCAAGACTCTTGGGGTGGTAGACCCCATTTCCCTAGAGAATTCTGTGGATCCCATTCTCCACACGTTATCTCTTTCTTAGTTTAAATCCTTTTTCTCTCTAGTACTACTGATTTTCAATAATTTTAAGTATTGGATTTATATGGGTCTAAATGGAGTGACATGGTTAGTGAAGTGGTGTTATTGTTGTAGTGGTTTATTCAACTAGGATGCTGATGTCCTATTCATTTATGTTAGCCTTGGCTGTGAAATTGCATTTTCACTGTTTGTACTTGAGGCTATTGTGGAATTGTATAAGTTTTTATATAATTCACGCGGGAGTTTCATCTTTTGTTACCTCTTATTATGAAAGATGGTTGTTTCCAGGGACATCATAACTCTATTAAATTCATCATAGGTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACAGTACCTCGAAGGAGCTGCACTAGCATATAATGAAGGATGGGAGCG</genome_strand>
        <mrna_strand>AACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAG...................................................................................................................ACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACAGTACCTCGAAGGAGCTGCACTAGCGTATAATGAAGGATGGGAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329790" ref_strand="+" ref_description="SGN-E329790 [cTOD-3-K4]">
      <seq>acacatccgccactctattttactctataaatactctatctttcaattttaaccacatttcaaatttcagaatctaatccttcatcgctcctcttcaatttcagactagcagaaacactttccgcacggtgtttcagaatctaaacaatcatcgatctctgctttaatttcaggtggtcttgttctagacagatgccagggaacaagtataccggcaaccaagcggttgctagcactcgattggagaggctattgagagaaagagagcttaggaaaagtagcaaagtttctcactttccaaatgaatctactgataacaataggggaaacgagctctctgaccatgattttcgccaaggagaagctgataatggaggagtttcatatgtcgaacagtacctcgaaggagctgcactagcatataatgaaggatgggagcggcctgatggaaagcccaccagacaacgactcttggttgtggcaaacaggttacctgtctctgcagtaaggagaggcgaggaatcctggtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="1" stop="4263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99" g_stop="202" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="203" i_stop="317" i_length="115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="318" g_stop="386" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="173" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="387" i_stop="3604" i_length="3218">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.802" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3605" g_stop="3963" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="532" r_length="359" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E329790" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99" e_stop="202"/>
          <exon e_start="318" e_stop="386"/>
          <exon e_start="3605" e_stop="3963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAGGTATATATATATGTATACTTCTTCTGTAATCCATCCGATGTTTAATTTGTTGCATTCAATTTTTTCATGATTGAGTAATCTGGATTTGAATTTGCAATCGCAAAATCGGTTGCAGACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAGGTACGTTTTTCATTTTTTTTTCTCCGTTCTGGAATCTGCCGATTGTTGATGATGTTTATCTATCTATATGCATGAAATTTATCACGAAATCGCTGAAATTCTGGTTGTTATAAGCAGTTTGCTATATATATATATTCTGTTTGTACGATTTTTGGATGAAGTTTTATATATATACTATATATAGATATAGATATCGTTGAACGTGAAATAGAAAAGAATTGCTTGGTCAGATCTAGATAGTAAATTTTTGAATTTTGAGGAGAGTACAAATGGAAGTGTATCTGCAAGGTGACGTAAAAAAGGTGCACTGGTAGTCCGCCACTCCATCCTGAATGCAGGAGCTGTACTGTTGTGTTTGCCCACTCAACTTGCCAAATTTCAAAAGCATGAAAAATTGGTAAACGAAACATTTTATTAAGAAATAAAATAATATTAACATAACAAACTAGATATTTTTTAGTCTTACTTGCTTATGTGGATTGTAGAATTTTTTTTAAAAAACGTTAAATTCACTCTAAGTCCTTTATTTTTATTTTTTTTGGTAAAAATGTAAAGTCCTTTAATTCATTTTTTTTATATAAAATATATTGAAAAATTATAGTCAAAAATAAAAGTGACGCATAAATACAAACGGACGGAGGTTGAAATTTATAACTTATGGGTGGAAAATTTTTTCCACTTTTTTGGAAAATAAGTACTTTTCATATTTAGTTTCAATTTTATCTCAAAAATATTATGACAGGGATAGGATGGTCTAAGGATATAAAATATTACTTTGTTTTCTCTGGAACTTGAAAATACTTTATGAAAATTATATTTCGTTATACCAACTCACCTTATATTAGAGTTTACATTTATATCTTATATATATATATATATATATATATTTAAATACTAATATAAAGTCTAGATAAAAATTATTATGTTCGTCTGAATCCAGACCTAATATTATAATTTAGGATTTCCCTTATAATTTCATTCAAGAAATTAATCTGTAAATGTCACCTTTCACTTTATTTTCCACTATACTGTTGCAAAAGAGAGAAATCAGAAAAGCTTGTGAATTTTATTTTGTTGTTGCTCTTATTGTTATTTTTTTTTGAAAAGATTCGGTTAGTTATGAGGATTGATGTGAACGCTAACCTCGTGAATCATAAATATTAAACCCACATTGATTCCGTTGTTATATATACAGCTCATCATACACACAAATTTTGTAATATCTCATTTTAATTTATTTATCCAATTTTAAAAAATTAAAATGTTATAATATCATTTCATACTGTCAAAGTATTTTTACTTGGTATAACGAATTATTATTGTTATCGACTCTTTGTCTTTGTGTCATTTAAATATGTGTTGAAACTTTTACTAACAATTATGATTATGTTGAGAATTTTTAGAAGCCTCATACTTTGCTGGACCCACCTTGTATAGGTTGGTGAGACAACGCTATATTAATATGGGTCCCTAATGCCTTATACAAAGGAAAATCATATTCTAGATTCCTTCTCAGATATTTAAAACAAAGGATTATTTTTTTATATACAAACACAAGGCAGTTCATTGCAAAATTCCACAGATTGTGAAAATAATAAAAAGCTTTTCGATATATAGTAAGTAAAGTAAATTAAATTTTTTTTGTTACTGTTTGTTTGTTTGCTTTTTTTTTTAATATTAGTTATGCCTTATTACTTGTCCGTTTTGACAAATCAAGAAATGATAATTTTTTTTTACCTATTATATCCTCAATTAATTATTTTAAAAAGGTAATTTTTTTTTGTTCTTATTAATAGATGTATCAATTCAATAATGGATAAGTAGATTTTCATAAATAAAATATGAGTATCTCTTGAGGCGTCGTATTAATAAATCATGTATCTTCAAATTTCTTTTAATAAATAATTTTATAAAGATTCAATAATAGTAATAACTAATTATTCTTTAATATAATTTTTTTATTTTTTTTATTTAAGTTTTGTAAAATTTAAAGGTATAAATCTTTCTTTTTACAACATATAAATTTATGATGAAGCTTTACATTTTTATACGGCTGATTATCTACTTTGTTTATTAAAGGTTTATCCCAAAATAATAAAATAACAAAAAATATAACATTAATCAAAATTAAAATTAATGATAATGATGGAGAATTAAAATTCGAGGTGGGCTAGATAGATGAGTAATTTTAGATTAATTCCAGGAATGTGCAGTCCGCGCAGCCTTTGAGGCCTTTTAAAAATAGGAATCTGAAAAAATAAAAAATCTGTGTGTCAGCTGCATGGCTGTAAGGCTTTATGCACCTTTTAAAGCTTACACGAGGATTCGTCTGCTCTTCCACTTCCCCTCTTTAGCTATGATAATAATTCCTCTGCCACCCGGTATTATCGATTTGCTCTCACAAATTCATCATCAAATGCTACTAATTTTTAATAATTACTCATAATTATTGTTGTGATCAAGCTTTTCCGGCCGGTTATCGATGTTGAGATCAGATTAGGCCAGGAATCCTTCCCCTTGTTTTTCACATCGGTTTTACAGGTAATTTGACACAGTCTGGATTTGATTTACCGTGGTTTCTGAAATGGGTTAATTAGCTGTCACAGAAATCTCTGTGCCTGTGTTCTTTTACAGCTTTCTCAATGAATTCGGGGTTTGGTTTTCTGCATGCAATGTGTTTGTGCCGGTGTCCGCTTTGAATCTGATAGCTGTTCTTTTTAATCTGGTGGGTCTTTATATGTTCGCACTTGCCTCATTGTATTTTGCTTGAACTGAAACTGGGATACCAAATGAATTTATATTTAAAATCCTGGACAGAAAAAGCCAAGACTCTTGGGGTGGTAGACCCCATTTCCCTAGAGAATTCTGTGGATCCCATTCTCCACACGTTATCTCTTTCTTAGTTTAAATCCTTTTTCTCTCTAGTACTACTGATTTTCAATAATTTTAAGTATTGGATTTATATGGGTCTAAATGGAGTGACATGGTTAGTGAAGTGGTGTTATTGTTGTAGTGGTTTATTCAACTAGGATGCTGATGTCCTATTCATTTATGTTAGCCTTGGCTGTGAAATTGCATTTTCACTGTTTGTACTTGAGGCTATTGTGGAATTGTATAAGTTTTTATATAATTCACGCGGGAGTTTCATCTTTTGTTACCTCTTATTATGAAAGATGGTTGTTTCCAGGGACATCATAACTCTATTAAATTCATCATAGGTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACAGTACCTCGAAGGAGCTGCACTAGCATATAATGAAGGATGGGAGCGGCCTGATGGAAAGCCCACCAGACAACGACTCTTGGTTGTGGCAAACAGGTTACCTGTCTCTGCAGTAAGGAGAGGCGAGGAATCCTGGTCTC</genome_strand>
        <mrna_strand>ACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAG...................................................................................................................ACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACAGTACCTCGAAGGAGCTGCACTAGCATATAATGAAGGATGGGAGCGGCCTGATGGAAAGCCCACCAGACAACGACTCTTGGTTGTGGCAAACAGGTTACCTGTCTCTGCAGTAAGGAGAGGCGAGGAATCCTGGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709070" ref_strand="+" ref_description="SGN-E709070 [FA42CD12]">
      <seq>cggtcttgttagtgctcttcttggtgtgaaggagtttgaggctagatggattggttgggcaggtgtgaatgtgccagatgaggctgggcagagggcacttactaaggcactggcagaaaagaggtgtatccctgtattcctggatgaagaaattgttcatcagtattacaacggttactgcaacaatatattgtggcctcttttccattatcttggacttccgcaagaagaccgccttgcgactaccagaagtttccagtctcagtttgctgcttataagaaagcaaatcaaatgtttgctgatgttgtgaatgaacattacgaagaaggtgatgtggtatggtgtcatgactaccatctcatgttcctgccaaaatgtctcaaggattacaacagccaaatgaaagtcggttggtttctacacacaccctttccatcctcggaaatacacaggacactgccgtctagatcagagctgctccgagcagttcttgctgctgacttggttggttttcatacctatgactatgcaaggcattttgttagtgcatgtactcgtatcctgggacttgaaggaacacctgaaggagtagaagatcaaggtagactgacccgcgttgctgcgtttcctattggtatagattcagaacgatttattcgagcacttgaagttactcaagttcaggaacacataaaagaactaaaagagagatttgctgggagaaaggttatgctaggagttgatcgccttgatatgattaaaggaattcccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="3681" stop="7388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3980" g_stop="4002" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4003" i_stop="4142" i_length="140">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4143" g_stop="4240" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="121" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4241" i_stop="4400" i_length="160">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4401" g_stop="4789" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="510" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4790" i_stop="5540" i_length="751">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5541" g_stop="5655" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="625" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5656" i_stop="5843" i_length="188">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5844" g_stop="5945" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="727" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5946" i_stop="7041" i_length="1096">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="7042" g_stop="7088" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="774" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E709070" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3980" e_stop="4002"/>
          <exon e_start="4143" e_stop="4240"/>
          <exon e_start="4401" e_stop="4789"/>
          <exon e_start="5541" e_stop="5655"/>
          <exon e_start="5844" e_stop="5945"/>
          <exon e_start="7042" e_stop="7088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCTTGTTAGTGCTCTTCTTGGTAAGCTAGCGTCTTCCCAGTCATTTCTGTTTTTACATTTGATCTTATTGTTTACCTTAACACTAATTATCTATTTCGCGTCTTTCATATTCATATTGTTGAAAAGAGTGCCTAATAGTTATGTTAATAATTTATTGAAGGTGTGAAGGAGTTTGAGGCTAGATGGATTGGTTGGGCAGGTGTGAATGTGCCAGATGAGGCTGGGCAGAGGGCACTTACTAAGGCACTGGCAGAAAAGGTTTAATACATCACTTTGCCACCATATTGCAGTTTACCACACTTCTCTTGCTTTTTTGAGTTTAGCAATTTGGAGATTGTTTTACATTTTTTTTCTCTCCAAGAAGATTGCTTTACCTATATTTTGCACTTGTTTACCCTTTTGATACTGTTCTTTGTAGAGGTGTATCCCTGTATTCCTGGATGAAGAAATTGTTCATCAGTATTACAACGGTTACTGCAACAATATATTGTGGCCTCTTTTCCATTATCTTGGACTTCCGCAAGAAGACCGCCTTGCGACTACCAGAAGTTTCCAGTCTCAGTTTGCTGCTTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAATGAACATTACGAAGAAGGTGATGTGGTATGGTGTCATGACTACCATCTCATGTTCCTGCCAAAATGTCTCAAGGATTACAACAGCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACACTGCCGTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGGGTAAACCCCTCTGAACAACTTATTCTCCTGCATAGGATCTAACAGCTAACTTTTCATTTTAGTTTAACCTTCATAATTTTGGAGCTACTGCCTGGAAATAGTTGGTGGGACCTAGACTATGAGATCCCCGACTGTCTGTGCTGAGAGTGAAAGTTGAAGTAGTGAAATGCAAGCATCTTAAATTTTAAATTTGTGGATTCTAATTGCGTTTTTTCATTACTAGATATAACACACTAGTGGTACCATTATAAAAAGAAATACTTACCATACTACTGGTTAGATCTCTGCCTCTCATTAAGATTACCTGGTGAGGCATGTCTTGAAAGATACGATTGGCAACCCCTAGTGTGATTGTGCAAGACACTCGATCAATAAAGTATAACTTAAAAAGCTGCATGTAAAAGATATATATTTGTCCTAGTTGACTTGTAAAGGAAAAGTGCTGGCTAAGTTGACTAACAAATTGTAGCATAAAAGGGGATGTGCTGGTTTCACTGGTAACTTTGTAACTGTCTGTATATCTACTATCCAATGATTATAGTATATTCTCATCTGTGGATTTCCATGTTACTGTGTTTCGGGTTGTATCACGCTGAATGTCCACTTCGTGGTATGATTTTTTGTCTCTTTACCTGTATGTAATGAAAGTCCTTTGGACTTAGACCTATATTTGCATTGTTTTATAATTTAATATCATTTTTTGTTACTCAAGCTAGGAAAGCTAATTATTTTTTATGGATTTAATTTGCAGTTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTGGGACTTGAAGGAACACCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCGGTATGTTTAAGTTAAACTTCATACACATTCACCCTGCAGTTCTTTTTCAAGAACTTCTGTAATCCTCATCTAAGCAATTTTATGTACTTAGCCTTGAGAAATATCTACTTGATTTATTTCAGAGTCATTTTAGAAATATCTACTTTGATTTCTTTCTGAGCCATTTTAAATTGTTCCTGTTCGTACAGTTTCCTATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTACTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAGGTATGTCTATCCCGACTCTGGATCCTCTCTCCATCTCACCAAATTTTACTTTTTTGGCATGATATCATTTTCATGAAGTAAGAAATATTTTGTTGTTTTGTCTAATTGTAAGTGTTCGATTTTACATGCTGTGCATCACCTTGGGGGAAAACTTGCTTTTTGAGACTTTCTTCACCAATTTCATTGTCTACTTTTAATTGTGAAATCTTGGCCTTGAATTCAGTCGACGTTGTATTTTTTTCTACCTATAGTTCCTTAAGCCAGATTTGGTCAAGACCTGAATCCATCTTGGCCAATTTTACCATCATCTTATGAAAATTATACCTTATGAGTGATGTCGTTCAAACCAAAGTGGGTGATACATATATAATAGTATGATATTTTCAAATCCTACTGTGACCTGTCATCACTACATTTTCATGTGCTTTAATCAAACAAAATTTTTCCAGTTCACTACACACTAGAAAGGGTATCTTATATGTGTAATGATAAATACATGTTTGTGTTGTTTTAGATGGTATAGTTACCATTTACAGAGTCAGATGTTTCTTACTAAAACTTCTTCTATTATCCAACAGTAGATATCTAAGTGTTGAAATTGGACAAAAACAAAAGAGAGAGAGAGAGAGAGAGAAGGAAAAAGGAAGAAAAAGAGATTTGTTTGCATTTGTCAGGAGTAATTGCGTTCTGTTGTTTTGGTCTTCAAGCAGATGTGGCTTCTTGGAATTTCCATGTGGCTTTACTAGGTTTAGATGTATTTCCCCACTTTTCTGTTTATATATAAAGTCACAATGGCTTCTCTCATTAGAAGGTGAAAGTTTATTTACTTCTAATTCATGAACATTTCAGCTTTTTTGAAGACTAACTGGATTTCCTCACCTTTAGTTGCAAAATTGTCAGTCTAGTGTTCTTGCTAACCATTTCTTATGTTGTTTTATCACTTTTATGTACATCAAACTCATATCACTTTCTTCTGTTTTGCCCACTTGTATCTATTGCACAATTTTATGCATTGGCCATGCATTAGAGATATTTAATTGCATGTCCTAGAAACTTCCATACTTGCTTGGTTTTTGCTAAAGAAATTTAATCACAGGTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCA</genome_strand>
        <mrna_strand>CGGTCTTGTTAGTGCTCTTCTTG............................................................................................................................................GTGTGAAGGAGTTTGAGGCTAGATGGATTGGTTGGGCAGGTGTGAATGTGCCAGATGAGGCTGGGCAGAGGGCACTTACTAAGGCACTGGCAGAAAAG................................................................................................................................................................AGGTGTATCCCTGTATTCCTGGATGAAGAAATTGTTCATCAGTATTACAACGGTTACTGCAACAATATATTGTGGCCTCTTTTCCATTATCTTGGACTTCCGCAAGAAGACCGCCTTGCGACTACCAGAAGTTTCCAGTCTCAGTTTGCTGCTTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAATGAACATTACGAAGAAGGTGATGTGGTATGGTGTCATGACTACCATCTCATGTTCCTGCCAAAATGTCTCAAGGATTACAACAGCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACACTGCCGTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTGGGACTTGAAGGAACACCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCG............................................................................................................................................................................................TTTCCTATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTACTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431631" ref_strand="+" ref_description="SGN-E431631 [STM-55-F2]">
      <seq>gccaaatgaaagtcggttggtttctacacacaccctttccatcctcggaatacacaggacattgccttctagatcagagctgctccgagcagttcttgctgctgacttggttggttttcatacctatgactatgcaaggcattttgttagtgcatgtactcgtatcctcggacttgaaggaactcctgaaggagtagaagatcaaggtagactgacccgcgttgctgcgtttcccattggtatagattcagaacgatttattcgagcacttgaagttgctcaagttcaggaacacataaaagaactaaaagagagatttgctgggagaaaggttatgctaggagttgatcgccttgatatgattaaaggaattccccagaagatcctggcatttgagaagttccttgaagaaaatccgtactggcgtgataaagtggttttgcttcaaattgctgtgccaacaagaacagatgttcctgaataccaaaaacttaccagtcaagttcatgagattgttggacgcatcaatggtcggtttggaactttgactgcagtgcctattcatcatctggaccgttctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="4375" stop="9823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4675" g_stop="4789" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4790" i_stop="5540" i_length="751">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5541" g_stop="5655" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="229" r_length="115" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5656" i_stop="5843" i_length="188">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.967" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5844" g_stop="5945" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="331" r_length="102" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5946" i_stop="7041" i_length="1096">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7042" g_stop="7192" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="482" r_length="151" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8216" g_stop="8304" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="571" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8395" g_stop="8443" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="620" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="9504" g_stop="9523" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="640" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E431631" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4675" e_stop="4789"/>
          <exon e_start="5541" e_stop="5655"/>
          <exon e_start="5844" e_stop="5945"/>
          <exon e_start="7042" e_stop="7192"/>
          <exon e_start="8216" e_stop="8304"/>
          <exon e_start="8395" e_stop="8443"/>
          <exon e_start="9504" e_stop="9523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACACTGCCGTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGGGTAAACCCCTCTGAACAACTTATTCTCCTGCATAGGATCTAACAGCTAACTTTTCATTTTAGTTTAACCTTCATAATTTTGGAGCTACTGCCTGGAAATAGTTGGTGGGACCTAGACTATGAGATCCCCGACTGTCTGTGCTGAGAGTGAAAGTTGAAGTAGTGAAATGCAAGCATCTTAAATTTTAAATTTGTGGATTCTAATTGCGTTTTTTCATTACTAGATATAACACACTAGTGGTACCATTATAAAAAGAAATACTTACCATACTACTGGTTAGATCTCTGCCTCTCATTAAGATTACCTGGTGAGGCATGTCTTGAAAGATACGATTGGCAACCCCTAGTGTGATTGTGCAAGACACTCGATCAATAAAGTATAACTTAAAAAGCTGCATGTAAAAGATATATATTTGTCCTAGTTGACTTGTAAAGGAAAAGTGCTGGCTAAGTTGACTAACAAATTGTAGCATAAAAGGGGATGTGCTGGTTTCACTGGTAACTTTGTAACTGTCTGTATATCTACTATCCAATGATTATAGTATATTCTCATCTGTGGATTTCCATGTTACTGTGTTTCGGGTTGTATCACGCTGAATGTCCACTTCGTGGTATGATTTTTTGTCTCTTTACCTGTATGTAATGAAAGTCCTTTGGACTTAGACCTATATTTGCATTGTTTTATAATTTAATATCATTTTTTGTTACTCAAGCTAGGAAAGCTAATTATTTTTTATGGATTTAATTTGCAGTTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTGGGACTTGAAGGAACACCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCGGTATGTTTAAGTTAAACTTCATACACATTCACCCTGCAGTTCTTTTTCAAGAACTTCTGTAATCCTCATCTAAGCAATTTTATGTACTTAGCCTTGAGAAATATCTACTTGATTTATTTCAGAGTCATTTTAGAAATATCTACTTTGATTTCTTTCTGAGCCATTTTAAATTGTTCCTGTTCGTACAGTTTCCTATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTACTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAGGTATGTCTATCCCGACTCTGGATCCTCTCTCCATCTCACCAAATTTTACTTTTTTGGCATGATATCATTTTCATGAAGTAAGAAATATTTTGTTGTTTTGTCTAATTGTAAGTGTTCGATTTTACATGCTGTGCATCACCTTGGGGGAAAACTTGCTTTTTGAGACTTTCTTCACCAATTTCATTGTCTACTTTTAATTGTGAAATCTTGGCCTTGAATTCAGTCGACGTTGTATTTTTTTCTACCTATAGTTCCTTAAGCCAGATTTGGTCAAGACCTGAATCCATCTTGGCCAATTTTACCATCATCTTATGAAAATTATACCTTATGAGTGATGTCGTTCAAACCAAAGTGGGTGATACATATATAATAGTATGATATTTTCAAATCCTACTGTGACCTGTCATCACTACATTTTCATGTGCTTTAATCAAACAAAATTTTTCCAGTTCACTACACACTAGAAAGGGTATCTTATATGTGTAATGATAAATACATGTTTGTGTTGTTTTAGATGGTATAGTTACCATTTACAGAGTCAGATGTTTCTTACTAAAACTTCTTCTATTATCCAACAGTAGATATCTAAGTGTTGAAATTGGACAAAAACAAAAGAGAGAGAGAGAGAGAGAGAAGGAAAAAGGAAGAAAAAGAGATTTGTTTGCATTTGTCAGGAGTAATTGCGTTCTGTTGTTTTGGTCTTCAAGCAGATGTGGCTTCTTGGAATTTCCATGTGGCTTTACTAGGTTTAGATGTATTTCCCCACTTTTCTGTTTATATATAAAGTCACAATGGCTTCTCTCATTAGAAGGTGAAAGTTTATTTACTTCTAATTCATGAACATTTCAGCTTTTTTGAAGACTAACTGGATTTCCTCACCTTTAGTTGCAAAATTGTCAGTCTAGTGTTCTTGCTAACCATTTCTTATGTTGTTTTATCACTTTTATGTACATCAAACTCATATCACTTTCTTCTGTTTTGCCCACTTGTATCTATTGCACAATTTTATGCATTGGCCATGCATTAGAGATATTTAATTGCATGTCCTAGAAACTTCCATACTTGCTTGGTTTTTGCTAAAGAAATTTAATCACAGGTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAATGTATTTTCTCGAGCAGATCCACTCTGAGTTCTTCTTTATGCCTTAAGTTAATTTATATTTTCCACTTCTCCTATTATCATTACTACCTTTAGGGAAAGTTTGTTTTCCACTATACTGGTTCAGTACGGTCATCAGATATTTTGATGGCTGAGTGGAGGTCTTTGATTCATAAGTCTATTGGTCGAAGCCTAAAATTTTTTCTAAAGGAGCATCATATATTCCTAAACCAAACTGAAAATTTGAAAATCCTGTTTAATGATCCGGACTTAAGGGCCAGGAAAAGGACATACACCACCAGCAATCCATCATGAATCTATTTAGTGCAGAATATAATGCCCCCTTACTGTTCGATATATATGCTTAGGAACCATGTGATCGTCGTGATTAGTCCCAACTTATTACCAAAGACGCTGATAGATGCACAGTAGATATAACCGACTAAATTAGATTAATCTCTCTCCTTCTCCTTCTACTATTTTTTCTCCACTTTCCATCTCTCTGTCTTAAACCTAATGTATACTTGCCATATTGGTTAAGATATTTGAAGGCATTCATTGATGTTAATCTGTATGTTAAGAGAATCCTGCCTTATTTTACCATCCACACTAGCCTTTATGAAGTTTTGTGCTGGAACAGAAACATCGAATACAAAATATCAGTGGATCCTTTATCAATCAATCAATACAATTAGAAAATTGTATTAAATCATTGCTTGTTCCTCACTTATGGGATTACACTGGGTTGTTGTCGCTGTGTATGACGTTATACTTGGGGCTCAATGATGATCTGTAGTCTATAGAACTTGTTGAGAAAATTAGTTGAGTTGGTTATCTGCTTTTTCCTTTGGTTCACTTTATAACAAAATTGATGTTTGTAATGCTAATATATTGACAAAAACCAGGTTGGACCTTAAAACTGTCGAGTTTCAATGAGATTTACTTGGTCATAAATGCAGATGCTTGTCATACTATATGTTTGCTTAAGTATGATATTTTACTTGCTTTCACCTTAATATTTTTGCAGACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTGGTTAGTTTTTTTTTTTGTCATATTCATTGTGCTTGAATGCAGGACCATTCTCTTGACTGAAATATGGATAATATGGGTTTTTAAATGCAGGACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCT</genome_strand>
        <mrna_strand>GCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGG-AATACACAGGACATTGCCTTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTCGGACTTGAAGGAACTCCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCG............................................................................................................................................................................................TTTCCCATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTGCTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAGAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG..........................................................................................GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464725" ref_strand="+" ref_description="SGN-E464725 [cPRO-18-L8]">
      <seq>gccaaatgaaagtcggttggtttctacacacaccctttccatcctcggaaatacacaggacattgccttctagatcagagctgctccgagcagttcttgctgctgacttggttggttttcatacctatgactatgcaaggcattttgttagtgcatgtactcgtatcctcggacttgaaggaactcctgaaggagtagaagatcaaggtagactgacccgcgttgctgcgtttcccattggtatagattcagaacgatttattcgagcacttgaagttgctcaagttcaggaacacataaaagaactaaaagagagatttgctgggagaaaggttatgctaggagttgatcgccttgatatgattaaaggaattccccagaagatcctggcatttgagaagttccttgaagaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="4375" stop="7425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4675" g_stop="4789" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4790" i_stop="5540" i_length="751">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5541" g_stop="5655" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="230" r_length="115" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5656" i_stop="5843" i_length="188">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.967" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5844" g_stop="5945" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="332" r_length="102" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5946" i_stop="7041" i_length="1096">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7042" g_stop="7125" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="416" r_length="84" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E464725" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4675" e_stop="4789"/>
          <exon e_start="5541" e_stop="5655"/>
          <exon e_start="5844" e_stop="5945"/>
          <exon e_start="7042" e_stop="7125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACACTGCCGTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGGGTAAACCCCTCTGAACAACTTATTCTCCTGCATAGGATCTAACAGCTAACTTTTCATTTTAGTTTAACCTTCATAATTTTGGAGCTACTGCCTGGAAATAGTTGGTGGGACCTAGACTATGAGATCCCCGACTGTCTGTGCTGAGAGTGAAAGTTGAAGTAGTGAAATGCAAGCATCTTAAATTTTAAATTTGTGGATTCTAATTGCGTTTTTTCATTACTAGATATAACACACTAGTGGTACCATTATAAAAAGAAATACTTACCATACTACTGGTTAGATCTCTGCCTCTCATTAAGATTACCTGGTGAGGCATGTCTTGAAAGATACGATTGGCAACCCCTAGTGTGATTGTGCAAGACACTCGATCAATAAAGTATAACTTAAAAAGCTGCATGTAAAAGATATATATTTGTCCTAGTTGACTTGTAAAGGAAAAGTGCTGGCTAAGTTGACTAACAAATTGTAGCATAAAAGGGGATGTGCTGGTTTCACTGGTAACTTTGTAACTGTCTGTATATCTACTATCCAATGATTATAGTATATTCTCATCTGTGGATTTCCATGTTACTGTGTTTCGGGTTGTATCACGCTGAATGTCCACTTCGTGGTATGATTTTTTGTCTCTTTACCTGTATGTAATGAAAGTCCTTTGGACTTAGACCTATATTTGCATTGTTTTATAATTTAATATCATTTTTTGTTACTCAAGCTAGGAAAGCTAATTATTTTTTATGGATTTAATTTGCAGTTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTGGGACTTGAAGGAACACCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCGGTATGTTTAAGTTAAACTTCATACACATTCACCCTGCAGTTCTTTTTCAAGAACTTCTGTAATCCTCATCTAAGCAATTTTATGTACTTAGCCTTGAGAAATATCTACTTGATTTATTTCAGAGTCATTTTAGAAATATCTACTTTGATTTCTTTCTGAGCCATTTTAAATTGTTCCTGTTCGTACAGTTTCCTATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTACTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAGGTATGTCTATCCCGACTCTGGATCCTCTCTCCATCTCACCAAATTTTACTTTTTTGGCATGATATCATTTTCATGAAGTAAGAAATATTTTGTTGTTTTGTCTAATTGTAAGTGTTCGATTTTACATGCTGTGCATCACCTTGGGGGAAAACTTGCTTTTTGAGACTTTCTTCACCAATTTCATTGTCTACTTTTAATTGTGAAATCTTGGCCTTGAATTCAGTCGACGTTGTATTTTTTTCTACCTATAGTTCCTTAAGCCAGATTTGGTCAAGACCTGAATCCATCTTGGCCAATTTTACCATCATCTTATGAAAATTATACCTTATGAGTGATGTCGTTCAAACCAAAGTGGGTGATACATATATAATAGTATGATATTTTCAAATCCTACTGTGACCTGTCATCACTACATTTTCATGTGCTTTAATCAAACAAAATTTTTCCAGTTCACTACACACTAGAAAGGGTATCTTATATGTGTAATGATAAATACATGTTTGTGTTGTTTTAGATGGTATAGTTACCATTTACAGAGTCAGATGTTTCTTACTAAAACTTCTTCTATTATCCAACAGTAGATATCTAAGTGTTGAAATTGGACAAAAACAAAAGAGAGAGAGAGAGAGAGAGAAGGAAAAAGGAAGAAAAAGAGATTTGTTTGCATTTGTCAGGAGTAATTGCGTTCTGTTGTTTTGGTCTTCAAGCAGATGTGGCTTCTTGGAATTTCCATGTGGCTTTACTAGGTTTAGATGTATTTCCCCACTTTTCTGTTTATATATAAAGTCACAATGGCTTCTCTCATTAGAAGGTGAAAGTTTATTTACTTCTAATTCATGAACATTTCAGCTTTTTTGAAGACTAACTGGATTTCCTCACCTTTAGTTGCAAAATTGTCAGTCTAGTGTTCTTGCTAACCATTTCTTATGTTGTTTTATCACTTTTATGTACATCAAACTCATATCACTTTCTTCTGTTTTGCCCACTTGTATCTATTGCACAATTTTATGCATTGGCCATGCATTAGAGATATTTAATTGCATGTCCTAGAAACTTCCATACTTGCTTGGTTTTTGCTAAAGAAATTTAATCACAGGTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAAT</genome_strand>
        <mrna_strand>GCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACATTGCCTTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTCGGACTTGAAGGAACTCCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCG............................................................................................................................................................................................TTTCCCATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTGCTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAGAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269883" ref_strand="+" ref_description="SGN-E269883 [cLEM-17-P9]">
      <seq>aaggttatgctaggagttgatcgccttgatatgattaaaggaattccccaaaagatcctggcatttgagaagttccttgaagaaaatccgtactggcgtgataaagtggttttgcttcaaattgctgtgccaacaagaacagatgttcctgaataccaaaaacttaccagtcaagttcatgagattgttggacgcatcaatggtcggtttggaactttgactgcagtgcctattcatcatctggaccgctctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctctttaagagatggcatgaacctcgtcagctatgaatatgtagcctgccaagagttgaaaaaaggggtccttattctcagcgaatttgctggtgctgcacaatcgttaggtgctggagcaattctggtgaatccatggaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="6740" stop="10586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6754" g_stop="6756" g_length="3"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3" r_length="3" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6757" i_stop="7041" i_length="285">
            <donor d_prob="0.932" d_score="0.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7042" g_stop="7192" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="154" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8216" g_stop="8304" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="243" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8395" g_stop="8443" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="292" r_length="49" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9504" g_stop="9604" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="393" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624">
            <donor d_prob="0.948" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10229" g_stop="10286" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="451" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E269883" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6754" e_stop="6756"/>
          <exon e_start="7042" e_stop="7192"/>
          <exon e_start="8216" e_stop="8304"/>
          <exon e_start="8395" e_stop="8443"/>
          <exon e_start="9504" e_stop="9604"/>
          <exon e_start="10229" e_stop="10286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGTGAAAGTTTATTTACTTCTAATTCATGAACATTTCAGCTTTTTTGAAGACTAACTGGATTTCCTCACCTTTAGTTGCAAAATTGTCAGTCTAGTGTTCTTGCTAACCATTTCTTATGTTGTTTTATCACTTTTATGTACATCAAACTCATATCACTTTCTTCTGTTTTGCCCACTTGTATCTATTGCACAATTTTATGCATTGGCCATGCATTAGAGATATTTAATTGCATGTCCTAGAAACTTCCATACTTGCTTGGTTTTTGCTAAAGAAATTTAATCACAGGTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAATGTATTTTCTCGAGCAGATCCACTCTGAGTTCTTCTTTATGCCTTAAGTTAATTTATATTTTCCACTTCTCCTATTATCATTACTACCTTTAGGGAAAGTTTGTTTTCCACTATACTGGTTCAGTACGGTCATCAGATATTTTGATGGCTGAGTGGAGGTCTTTGATTCATAAGTCTATTGGTCGAAGCCTAAAATTTTTTCTAAAGGAGCATCATATATTCCTAAACCAAACTGAAAATTTGAAAATCCTGTTTAATGATCCGGACTTAAGGGCCAGGAAAAGGACATACACCACCAGCAATCCATCATGAATCTATTTAGTGCAGAATATAATGCCCCCTTACTGTTCGATATATATGCTTAGGAACCATGTGATCGTCGTGATTAGTCCCAACTTATTACCAAAGACGCTGATAGATGCACAGTAGATATAACCGACTAAATTAGATTAATCTCTCTCCTTCTCCTTCTACTATTTTTTCTCCACTTTCCATCTCTCTGTCTTAAACCTAATGTATACTTGCCATATTGGTTAAGATATTTGAAGGCATTCATTGATGTTAATCTGTATGTTAAGAGAATCCTGCCTTATTTTACCATCCACACTAGCCTTTATGAAGTTTTGTGCTGGAACAGAAACATCGAATACAAAATATCAGTGGATCCTTTATCAATCAATCAATACAATTAGAAAATTGTATTAAATCATTGCTTGTTCCTCACTTATGGGATTACACTGGGTTGTTGTCGCTGTGTATGACGTTATACTTGGGGCTCAATGATGATCTGTAGTCTATAGAACTTGTTGAGAAAATTAGTTGAGTTGGTTATCTGCTTTTTCCTTTGGTTCACTTTATAACAAAATTGATGTTTGTAATGCTAATATATTGACAAAAACCAGGTTGGACCTTAAAACTGTCGAGTTTCAATGAGATTTACTTGGTCATAAATGCAGATGCTTGTCATACTATATGTTTGCTTAAGTATGATATTTTACTTGCTTTCACCTTAATATTTTTGCAGACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTGGTTAGTTTTTTTTTTTGTCATATTCATTGTGCTTGAATGCAGGACCATTCTCTTGACTGAAATATGGATAATATGGGTTTTTAAATGCAGGACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAAGTAATAATCATATATCTTATTGCAATGCTATTTCCTCTCATGTCATAATTACTATTGTTTTTTCTTTAAAAATTATTTTATGTTTTTCGGCATTGTGAAGCAATAAAATGAAAAATAAAATTAGACATAACCTTATGGATGTTTTCGTGCTTATTTGCTAATTAATTTTGACAAAGCTAACCGTTTATAGAAGAAAAAAAACAAGATTATAGTTTCCAATAAAAATATTTGACACAATCCTTTTTCCAAATGAAAAGAAAAGTATTTTGCAATAAAAAGATTTTGACAAAGCTAACCATACCTTCATTCTTCTTCCTACTTCTTCTTTTTTTCCCCTCTGTTTATGACATTTTTATATACTATTTTAAATTTAATTTTTTTACAACAATTGTTTTTATATGTTCATGAAAATAAATAGTGAATTAATTCTTAAAATGATAACTTTATAGCTTTGCATTTAAAAAAGCAAATTTCGAAAAATTATGCATGAATTTTATTACTAAAAATCTTATGATATTTTATCAAGTTTTTGTTTTAGGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAAGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATA</genome_strand>
        <mrna_strand>AAG.............................................................................................................................................................................................................................................................................................GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG..........................................................................................GACCGCTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATATGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450639" ref_strand="+" ref_description="SGN-E450639 [cSTS-9-P14]">
      <seq>atcctggcatttgagaagttccttgaagaaaatccgtacctggcgtgataaagtggttttgcttcaaattgctgtgccaacaagaacagatgttcctgaataccaaaaacttaccagtcaagttcatgagattgttggacgcatcaatggtcggtttggaactttgactgcagtgcctattcatcatctggaccgttctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctctttaagagatggcatgaacctcgtcagctatgaatttgtagcctgccaagagttgaaaaaaggggtccttattctcagcgaatttgcaggtgctgcacaatcattaggtgctggagcaattctggtgaatccatggaatataacagaggttgctgcatcgattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgcatgtgactacccatactgctcaaagtcatctcagaataggaacaggccagtttcaaactcggataagaaaacttccaatggacgacgaccctcacctgaaaatgtgtcgtggaatgtgctggatctgaagaaagagaattacttctcttgtgcagttggcaggactcgtacaaagctcggtatctgctcatacgcctgacgatgttgttgcttttctagggaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="6793" stop="13529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7093" g_stop="7192" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8216" g_stop="8304" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="190" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8395" g_stop="8443" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="239" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9504" g_stop="9604" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="340" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10229" g_stop="10388" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="500" r_length="160" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10389" i_stop="13018" i_length="2630">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="13019" g_stop="13229" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="708" r_length="208" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E450639" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7093" e_stop="7192"/>
          <exon e_start="8216" e_stop="8304"/>
          <exon e_start="8395" e_stop="8443"/>
          <exon e_start="9504" e_stop="9604"/>
          <exon e_start="10229" e_stop="10388"/>
          <exon e_start="13019" e_stop="13229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTA-CTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAATGTATTTTCTCGAGCAGATCCACTCTGAGTTCTTCTTTATGCCTTAAGTTAATTTATATTTTCCACTTCTCCTATTATCATTACTACCTTTAGGGAAAGTTTGTTTTCCACTATACTGGTTCAGTACGGTCATCAGATATTTTGATGGCTGAGTGGAGGTCTTTGATTCATAAGTCTATTGGTCGAAGCCTAAAATTTTTTCTAAAGGAGCATCATATATTCCTAAACCAAACTGAAAATTTGAAAATCCTGTTTAATGATCCGGACTTAAGGGCCAGGAAAAGGACATACACCACCAGCAATCCATCATGAATCTATTTAGTGCAGAATATAATGCCCCCTTACTGTTCGATATATATGCTTAGGAACCATGTGATCGTCGTGATTAGTCCCAACTTATTACCAAAGACGCTGATAGATGCACAGTAGATATAACCGACTAAATTAGATTAATCTCTCTCCTTCTCCTTCTACTATTTTTTCTCCACTTTCCATCTCTCTGTCTTAAACCTAATGTATACTTGCCATATTGGTTAAGATATTTGAAGGCATTCATTGATGTTAATCTGTATGTTAAGAGAATCCTGCCTTATTTTACCATCCACACTAGCCTTTATGAAGTTTTGTGCTGGAACAGAAACATCGAATACAAAATATCAGTGGATCCTTTATCAATCAATCAATACAATTAGAAAATTGTATTAAATCATTGCTTGTTCCTCACTTATGGGATTACACTGGGTTGTTGTCGCTGTGTATGACGTTATACTTGGGGCTCAATGATGATCTGTAGTCTATAGAACTTGTTGAGAAAATTAGTTGAGTTGGTTATCTGCTTTTTCCTTTGGTTCACTTTATAACAAAATTGATGTTTGTAATGCTAATATATTGACAAAAACCAGGTTGGACCTTAAAACTGTCGAGTTTCAATGAGATTTACTTGGTCATAAATGCAGATGCTTGTCATACTATATGTTTGCTTAAGTATGATATTTTACTTGCTTTCACCTTAATATTTTTGCAGACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTGGTTAGTTTTTTTTTTTGTCATATTCATTGTGCTTGAATGCAGGACCATTCTCTTGACTGAAATATGGATAATATGGGTTTTTAAATGCAGGACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAAGTAATAATCATATATCTTATTGCAATGCTATTTCCTCTCATGTCATAATTACTATTGTTTTTTCTTTAAAAATTATTTTATGTTTTTCGGCATTGTGAAGCAATAAAATGAAAAATAAAATTAGACATAACCTTATGGATGTTTTCGTGCTTATTTGCTAATTAATTTTGACAAAGCTAACCGTTTATAGAAGAAAAAAAACAAGATTATAGTTTCCAATAAAAATATTTGACACAATCCTTTTTCCAAATGAAAAGAAAAGTATTTTGCAATAAAAAGATTTTGACAAAGCTAACCATACCTTCATTCTTCTTCCTACTTCTTCTTTTTTTCCCCTCTGTTTATGACATTTTTATATACTATTTTAAATTTAATTTTTTTACAACAATTGTTTTTATATGTTCATGAAAATAAATAGTGAATTAATTCTTAAAATGATAACTTTATAGCTTTGCATTTAAAAAAGCAAATTTCGAAAAATTATGCATGAATTTTATTACTAAAAATCTTATGATATTTTATCAAGTTTTTGTTTTAGGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAAGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTGGTATAACTCGCTCCTTCTTTAAAAATATTTGCCTGAAACTCTTACTTATACAGAAGCTTACAGTTGACTTCTTTACTTCCTTAATGACTCTGACATTGATGATAAATTTTTGAGCGTTGAAGAGTTCATATATTGCAGAAAGTCTATATATATGGCTTTAGATGTTGAATAACGTTTGTGGAAAAATCCTATGCAAATTTGAATAGCATTCCAACTATGTGTTTGAATTTGACATGTGCGCTTGAGTCCAAGTTGGTGCTGCTTTTGTTTGCATATTTGAGCAAAGGGATCTAGGACGCTATCATGATTAGGGGCCTTGATGATCTGGGTAGACATTTGTGTTAAGGGGTTATACATATGGTGAAGAGTGGATGCAGCCTCCCCTCCCCCATTGCCTTTCTGAGGGAACTTAAGCTCTAAGCCAAATTTTGTGCGATATTATATTCTTTTCGAATTCAATTTTCTTTTCTTTGATCAGTATATGCAGCAACTAGCTAAGTTAATGACAATTTCTTGATTTCATTGTGGTGGTCCTCAAAAACAGGGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAGGTGACAACGTTGTTTCTTATGTAACAATTCGTTTTCCCTATCCTGTACACTCATGTGTATATACACACACATGCAGGGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTA</genome_strand>
        <mrna_strand>ATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACCTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG..........................................................................................GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGGTGCTGCACAATCATTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCATCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACCCATACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAAGTCATCTCAGAATAGGAACAGGCCAGTTTCAAACTCGGATAAGAAAACTTCCAATGGACGACGACCCTCACCTGAAAATGTGTCGTGGAATGTGCTGGATCTGAAGAAAGAGAATTACTTCTCTTGTGCAGTTGGCAGGACTCGTACAAA-GCTCGGTATCTGCTCA-TACGCCTGACGATGTTGTTGCTTTTCT-AGGGAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423536" ref_strand="+" ref_description="SGN-E423536 [STM-42-M11]">
      <seq>atcctggcatttgagaagttccttgaagaaaatccgtactggcgtgataaagtggttttgcttcaaattgctgtgccaacaagaacagatgttcctgaataccaaaaacttaccagtcaagttcatgagattgttggacgcatcaatggtcggtttggaactttgactgcagtgcctattcatcatctggaccgttctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctctttaagagatggcatgaacctcgtcagctatgaatttgtagcctgccaagagttgaaaaaaggggtccttattctcagcgaatttgcaggtgctgcacaatcattaggtgctggagcaattctggtgaatccatggaatataacagaggttgctgcatcgattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgcatgtgactacccatactgctcaaagtcatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="6793" stop="10697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7093" g_stop="7192" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023">
            <donor d_prob="0.771" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8216" g_stop="8304" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="189" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8395" g_stop="8443" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="238" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9504" g_stop="9604" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="339" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10229" g_stop="10403" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="513" r_length="174" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E423536" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423536" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7093" e_stop="7192"/>
          <exon e_start="8216" e_stop="8304"/>
          <exon e_start="8395" e_stop="8443"/>
          <exon e_start="9504" e_stop="9604"/>
          <exon e_start="10229" e_stop="10403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAATGTATTTTCTCGAGCAGATCCACTCTGAGTTCTTCTTTATGCCTTAAGTTAATTTATATTTTCCACTTCTCCTATTATCATTACTACCTTTAGGGAAAGTTTGTTTTCCACTATACTGGTTCAGTACGGTCATCAGATATTTTGATGGCTGAGTGGAGGTCTTTGATTCATAAGTCTATTGGTCGAAGCCTAAAATTTTTTCTAAAGGAGCATCATATATTCCTAAACCAAACTGAAAATTTGAAAATCCTGTTTAATGATCCGGACTTAAGGGCCAGGAAAAGGACATACACCACCAGCAATCCATCATGAATCTATTTAGTGCAGAATATAATGCCCCCTTACTGTTCGATATATATGCTTAGGAACCATGTGATCGTCGTGATTAGTCCCAACTTATTACCAAAGACGCTGATAGATGCACAGTAGATATAACCGACTAAATTAGATTAATCTCTCTCCTTCTCCTTCTACTATTTTTTCTCCACTTTCCATCTCTCTGTCTTAAACCTAATGTATACTTGCCATATTGGTTAAGATATTTGAAGGCATTCATTGATGTTAATCTGTATGTTAAGAGAATCCTGCCTTATTTTACCATCCACACTAGCCTTTATGAAGTTTTGTGCTGGAACAGAAACATCGAATACAAAATATCAGTGGATCCTTTATCAATCAATCAATACAATTAGAAAATTGTATTAAATCATTGCTTGTTCCTCACTTATGGGATTACACTGGGTTGTTGTCGCTGTGTATGACGTTATACTTGGGGCTCAATGATGATCTGTAGTCTATAGAACTTGTTGAGAAAATTAGTTGAGTTGGTTATCTGCTTTTTCCTTTGGTTCACTTTATAACAAAATTGATGTTTGTAATGCTAATATATTGACAAAAACCAGGTTGGACCTTAAAACTGTCGAGTTTCAATGAGATTTACTTGGTCATAAATGCAGATGCTTGTCATACTATATGTTTGCTTAAGTATGATATTTTACTTGCTTTCACCTTAATATTTTTGCAGACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTGGTTAGTTTTTTTTTTTGTCATATTCATTGTGCTTGAATGCAGGACCATTCTCTTGACTGAAATATGGATAATATGGGTTTTTAAATGCAGGACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAAGTAATAATCATATATCTTATTGCAATGCTATTTCCTCTCATGTCATAATTACTATTGTTTTTTCTTTAAAAATTATTTTATGTTTTTCGGCATTGTGAAGCAATAAAATGAAAAATAAAATTAGACATAACCTTATGGATGTTTTCGTGCTTATTTGCTAATTAATTTTGACAAAGCTAACCGTTTATAGAAGAAAAAAAACAAGATTATAGTTTCCAATAAAAATATTTGACACAATCCTTTTTCCAAATGAAAAGAAAAGTATTTTGCAATAAAAAGATTTTGACAAAGCTAACCATACCTTCATTCTTCTTCCTACTTCTTCTTTTTTTCCCCTCTGTTTATGACATTTTTATATACTATTTTAAATTTAATTTTTTTACAACAATTGTTTTTATATGTTCATGAAAATAAATAGTGAATTAATTCTTAAAATGATAACTTTATAGCTTTGCATTTAAAAAAGCAAATTTCGAAAAATTATGCATGAATTTTATTACTAAAAATCTTATGATATTTTATCAAGTTTTTGTTTTAGGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAAGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTG</genome_strand>
        <mrna_strand>ATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG..........................................................................................GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGGTGCTGCACAATCATTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCATCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACCCATACTGCTCAA-AGTCATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246548" ref_strand="+" ref_description="SGN-E246548 [cLEF-45-M16]">
      <seq>aataccaaaaacttaccagtcaagttcatgagattgttggacacatcaatggtccgcttaaaactttcactgcagtgcctattcattatctggaccgttctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctctttaagagatggcatgaacctcgtcatctatgaatttgtagcctgccaagagttgaaaaaatgggtccttattctcagcgaatttgctggtgctgcacaatcattaggtgctggagcaattctggtgaattcatggaatataacagaggttgctgcttctattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgtatgtgactactcatactgctcaagaatgggctgagacttttgtgagtgaactaaatgatactgttattgaagctcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="7914" stop="11289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8216" g_stop="8304" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="92" r_length="89" r_score="0.921"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90">
            <donor d_prob="0.988" d_score="0.86"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8395" g_stop="8443" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="141" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9504" g_stop="9604" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="242" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624">
            <donor d_prob="0.948" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10229" g_stop="10416" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="430" r_length="188" r_score="0.973"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542">
            <donor d_prob="0.967" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10959" g_stop="10989" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="461" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E246548" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8216" e_stop="8304"/>
          <exon e_start="8395" e_stop="8443"/>
          <exon e_start="9504" e_stop="9604"/>
          <exon e_start="10229" e_stop="10416"/>
          <exon e_start="10959" e_stop="10989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTGGTTAGTTTTTTTTTTTGTCATATTCATTGTGCTTGAATGCAGGACCATTCTCTTGACTGAAATATGGATAATATGGGTTTTTAAATGCAGGACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAAGTAATAATCATATATCTTATTGCAATGCTATTTCCTCTCATGTCATAATTACTATTGTTTTTTCTTTAAAAATTATTTTATGTTTTTCGGCATTGTGAAGCAATAAAATGAAAAATAAAATTAGACATAACCTTATGGATGTTTTCGTGCTTATTTGCTAATTAATTTTGACAAAGCTAACCGTTTATAGAAGAAAAAAAACAAGATTATAGTTTCCAATAAAAATATTTGACACAATCCTTTTTCCAAATGAAAAGAAAAGTATTTTGCAATAAAAAGATTTTGACAAAGCTAACCATACCTTCATTCTTCTTCCTACTTCTTCTTTTTTTCCCCTCTGTTTATGACATTTTTATATACTATTTTAAATTTAATTTTTTTACAACAATTGTTTTTATATGTTCATGAAAATAAATAGTGAATTAATTCTTAAAATGATAACTTTATAGCTTTGCATTTAAAAAAGCAAATTTCGAAAAATTATGCATGAATTTTATTACTAAAAATCTTATGATATTTTATCAAGTTTTTGTTTTAGGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAAGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAA</genome_strand>
        <mrna_strand>ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACACATCAATGGTCCGCTTAAAACTTTCACTGCAGTGCCTATTCATTATCTG..........................................................................................GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCATCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAATGGGTCCTTATTCTCAGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGGTGCTGCACAATCATTAGGTGCTGGAGCAATTCTGGTGAATTCATGGAATATAACAGAGGTTGCTGCTTCTATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGTATGTGACTACTCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTAAATGATACTGTTATTGAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423537" ref_strand="-" ref_description="SGN-E423537 [STM-42-M11]">
      <seq>gtcaagttcatgagattgttggacgcatcaatggtcggtttggaactttgactgcagtgcctattcatcatctggaccgttctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctctttaagagatggcatgaacctcgtcagctatgaatttgtagcctgccaagagttgaaaaaaggggtccttattctcagcgaatttgcaggtgctgcacaatcattaggtgctggagcaattctggtgaatccatggaatataacagaggttgctgcatcgattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgcatgtgactacccatactgctcaaagtcatctcagaataggaacaggccagtttcaaactcggataagaaaacttccaatggacgacgaccctcacctgaaaatgtgtcgtggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggcaggactcgtacaaatgctcggtatctgctcaatacgcctgacgatgttgttgcttttctaagggaactaggtgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgctggttgcatcaagtgatgaatgatcggtaccaagttcttgattgagggagatttgtatgggatgatattgaataaacgttttataccttctttgctttggatatagatgattgcattcaatagtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="7931" stop="13672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8231" g_stop="8304" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8395" g_stop="8443" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="123" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9504" g_stop="9604" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="224" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10229" g_stop="10388" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="384" r_length="160" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10389" i_stop="13018" i_length="2630">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13019" g_stop="13415" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="783" r_length="399" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E423537" ref_strand="-">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423537" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="8231" e_stop="8304"/>
          <exon e_start="8395" e_stop="8443"/>
          <exon e_start="9504" e_stop="9604"/>
          <exon e_start="10229" e_stop="10388"/>
          <exon e_start="13019" e_stop="13415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTGGTTAGTTTTTTTTTTTGTCATATTCATTGTGCTTGAATGCAGGACCATTCTCTTGACTGAAATATGGATAATATGGGTTTTTAAATGCAGGACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAAGTAATAATCATATATCTTATTGCAATGCTATTTCCTCTCATGTCATAATTACTATTGTTTTTTCTTTAAAAATTATTTTATGTTTTTCGGCATTGTGAAGCAATAAAATGAAAAATAAAATTAGACATAACCTTATGGATGTTTTCGTGCTTATTTGCTAATTAATTTTGACAAAGCTAACCGTTTATAGAAGAAAAAAAACAAGATTATAGTTTCCAATAAAAATATTTGACACAATCCTTTTTCCAAATGAAAAGAAAAGTATTTTGCAATAAAAAGATTTTGACAAAGCTAACCATACCTTCATTCTTCTTCCTACTTCTTCTTTTTTTCCCCTCTGTTTATGACATTTTTATATACTATTTTAAATTTAATTTTTTTACAACAATTGTTTTTATATGTTCATGAAAATAAATAGTGAATTAATTCTTAAAATGATAACTTTATAGCTTTGCATTTAAAAAAGCAAATTTCGAAAAATTATGCATGAATTTTATTACTAAAAATCTTATGATATTTTATCAAGTTTTTGTTTTAGGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAAGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTGGTATAACTCGCTCCTTCTTTAAAAATATTTGCCTGAAACTCTTACTTATACAGAAGCTTACAGTTGACTTCTTTACTTCCTTAATGACTCTGACATTGATGATAAATTTTTGAGCGTTGAAGAGTTCATATATTGCAGAAAGTCTATATATATGGCTTTAGATGTTGAATAACGTTTGTGGAAAAATCCTATGCAAATTTGAATAGCATTCCAACTATGTGTTTGAATTTGACATGTGCGCTTGAGTCCAAGTTGGTGCTGCTTTTGTTTGCATATTTGAGCAAAGGGATCTAGGACGCTATCATGATTAGGGGCCTTGATGATCTGGGTAGACATTTGTGTTAAGGGGTTATACATATGGTGAAGAGTGGATGCAGCCTCCCCTCCCCCATTGCCTTTCTGAGGGAACTTAAGCTCTAAGCCAAATTTTGTGCGATATTATATTCTTTTCGAATTCAATTTTCTTTTCTTTGATCAGTATATGCAGCAACTAGCTAAGTTAATGACAATTTCTTGATTTCATTGTGGTGGTCCTCAAAAACAGGGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAGGTGACAACGTTGTTTCTTATGTAACAATTCGTTTTCCCTATCCTGTACACTCATGTGTATATACACACACATGCAGGGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATA-C--CTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAG</genome_strand>
        <mrna_strand>GTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG..........................................................................................GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGGTGCTGCACAATCATTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCATCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACCCATACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAAGTCATCTCAGAATAGGAACAGGCCAGTTTCAAACTCGGATAAGAAAACTTCCAATGGACGACGACCCTCACCTGAAAATGTGTCGTGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGCAGGACTCGTACAAATGCTCGGTATCTGCTCAATACGCCTGACGATGTTGTTGCTTTTCTAAGGGAACTAGGTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATG-CTGGTTGCATCAAGTGATGAATGATCGGTACCAAGTTCTTGATTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTCTTTGCTTTGGATATAGATGATTGCATTCAATAGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747335" ref_strand="+" ref_description="SGN-E747335 [GI|47104627]">
      <seq>ttctcttgactttcatgcattatgtgcactgtatgctgtaactgatgtagcgttggttacctctttaagagatggcatgaacctcgtcagctatgaatttgtagcctgccaagagttgaaaaaaggggtccttattctcagcgaatttgctggtgctgcacaatcgttaggtgctggagcaattctggtgaatccatggaatataacagaggttgctgcttcgattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgcatgtgactacgcatactgctcaagaatgggctgagacttttgtgagtgaactaaatgatactgttattgaagctcaacagaggataagaaaagttccgccccggcttaacatcagtgatgcaattgagcgctattcgttttccaataatcgactactaatattgggtttcaattctacactgacagaatcggtggatacccctggaagaagaggtggagatcaaatcaaagaaatggaactgaaattgcatcctgagttgaaagaatcattgctcgcgatttgtaacgacccaaagacaacagtcgttgtcctcagtggaagtgatagaaacgtcttagatgataacttcagcgagtacaacatgtggttagcagcagaaaatggaatgtttttacgatctacaaacggtgtatggatgacaactatgccagaacacctaaacatggactgggttgatagtgttaagcacgttttcgagtacttcactgaaaggacaccgagatctcactttgaacaacgtgaaacttcacttgtttggaattacaagtatgcagatgttgaatttggaagattgcaagctagagacatgcttcagcatctctggacaggtccaatatcaaatgcatctgttgatgttgtacaaggactccgctccgttgaggttcgagcagttggtgttacaaagggagcagcaatagatcgtatactgggggagatcgtacacagtaaagccatcgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcatcggtatgccaagaagtaaggtcagtgatgcaccaaaggtgcccggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacagaccagtttcaaactcggataagaagacttccaatgggcgacggccctcacctgaaaatgtgtcatggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggaaggactcgtacaaacgctcggtatctgctcagtacgccagacgacgttgttgcttttctaagggaactagctgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgcctggttgcatcaagtgatgaatgatcagtaccaagttcttggttgagggagatttgtatgggatgatattgaataaacgttttatacctttactttggatatagatgtttgcattcaaaagtttacaaagtagagagaataaccttcatgctagctagtacatccgtgccaattattttgtctagtcttttactttggcacgaaattttaagaaaattaagaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="8100" stop="13806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8400" g_stop="8443" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9504" g_stop="9604" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="145" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10229" g_stop="10416" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="333" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10959" g_stop="11076" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="451" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11077" i_stop="11620" i_length="544">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11621" g_stop="11800" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="631" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79">
            <donor d_prob="0.220" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11880" g_stop="12002" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="754" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="12076" g_stop="12163" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="755" r_stop="842" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="12321" g_stop="12451" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="843" r_stop="973" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="12452" i_stop="12527" i_length="76">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="12528" g_stop="12626" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="1072" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="12882" g_stop="13506" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1073" r_stop="1697" r_length="625" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1698" polyA_stop="1710"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E747335" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1697</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8400" e_stop="8443"/>
          <exon e_start="9504" e_stop="9604"/>
          <exon e_start="10229" e_stop="10416"/>
          <exon e_start="10959" e_stop="11076"/>
          <exon e_start="11621" e_stop="11800"/>
          <exon e_start="11880" e_stop="12002"/>
          <exon e_start="12076" e_stop="12163"/>
          <exon e_start="12321" e_stop="12451"/>
          <exon e_start="12528" e_stop="12626"/>
          <exon e_start="12882" e_stop="13506"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTGGTAATTCTTTTCATCTTGCACTTAATTCTGCGATTCTTATATAGTTCTGTTAGAAGCTTCCTTACTTCTGCGATTCTTGTATAGTTCTGTTAGAAGTTTCCATACACCATTCGTGCCCCCCCCCCCCCCCCCTTCTTCAGTTGTTTCTCCACACTAGGTGATTCTTCCCATCTATCCTAGCCTTGGTGGATAGAGTTACCTAGTACTTGTTGCTGGTGGGGGGGGGGGGATTAGTTGAGGTGGGCTAAAGCTAACCCGGACACCACAGTCATAAAAAAGATAGTGTTGTTTCTGCTCATCTATGTTTAGTCTTGCTATTTTCTTCTTCAGTTCTTTTGAAGGCACTACTAGTACATGCTTATCCTCTCACCTATGATCTCACCTGGTGTGAGTCCTATTGGAATTGACATAAACAATGAGAAGAGGTTAGCAATGTATGTTATAAATGGATGTCCTCCTAAATATCATAGTTCTCGAGAAAGGTTATATCTCTGCATAGTTTTTCTTAAGGTTGTTTCCCCTTCAGGTTTGCTAATTACTCACCAAAGCTTAAAAATCTTGTAGTTTCACTACTCTTCTGGACATAACAAATTAGTTTGGCAATGGAATAGATTGATTGAGGCCTCTGTATGTTCTCAAATAAATCTGCATCATTTGGACTTTCTAGAAATTGGATATAAGCTTGTAAATCTGGAGTTGGTCCATAACTTTATTCGCTAGAGAATGCATAAGTTGTGCTCCAGGATCTGAATGAGGGATGATTGGATAAGTATGTTTTTGACACATTCTGAAAACATATACATGCCAAAGTCCATATTTTCCTTATTGTTATCTTGAAGAAAACGAAAGGTTTTACTAATGCTACTTTTTCCATCATATTTGTTATATTCCTATTTGTTCAAGATTATAGAATGGTGAAATAATAATATTGACATGATGATAATTTAAATATATATATATATTAATAATTCAGTTGTTTTTCCTCATTAGCTAATTTCTTTTGGTAGTTGCATGTCAGTTCCTATTTTATTTGATAAATTGGCAATGTTTTGTTCATCAGATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAAGTAATAATCATATATCTTATTGCAATGCTATTTCCTCTCATGTCATAATTACTATTGTTTTTTCTTTAAAAATTATTTTATGTTTTTCGGCATTGTGAAGCAATAAAATGAAAAATAAAATTAGACATAACCTTATGGATGTTTTCGTGCTTATTTGCTAATTAATTTTGACAAAGCTAACCGTTTATAGAAGAAAAAAAACAAGATTATAGTTTCCAATAAAAATATTTGACACAATCCTTTTTCCAAATGAAAAGAAAAGTATTTTGCAATAAAAAGATTTTGACAAAGCTAACCATACCTTCATTCTTCTTCCTACTTCTTCTTTTTTTCCCCTCTGTTTATGACATTTTTATATACTATTTTAAATTTAATTTTTTTACAACAATTGTTTTTATATGTTCATGAAAATAAATAGTGAATTAATTCTTAAAATGATAACTTTATAGCTTTGCATTTAAAAAAGCAAATTTCGAAAAATTATGCATGAATTTTATTACTAAAAATCTTATGATATTTTATCAAGTTTTTGTTTTAGGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAAGTCACTGATTGTATTGTGCCTCCTCTGTTTATAGTTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTGGTATAACTCGCTCCTTCTTTAAAAATATTTGCCTGAAACTCTTACTTATACAGAAGCTTACAGTTGACTTCTTTACTTCCTTAATGACTCTGACATTGATGATAAATTTTTGAGCGTTGAAGAGTTCATATATTGCAGAAAGTCTATATATATGGCTTTAGATGTTGAATAACGTTTGTGGAAAAATCCTATGCAAATTTGAATAGCATTCCAACTATGTGTTTGAATTTGACATGTGCGCTTGAGTCCAAGTTGGTGCTGCTTTTGTTTGCATATTTGAGCAAAGGGATCTAGGACGCTATCATGATTAGGGGCCTTGATGATCTGGGTAGACATTTGTGTTAAGGGGTTATACATATGGTGAAGAGTGGATGCAGCCTCCCCTCCCCCATTGCCTTTCTGAGGGAACTTAAGCTCTAAGCCAAATTTTGTGCGATATTATATTCTTTTCGAATTCAATTTTCTTTTCTTTGATCAGTATATGCAGCAACTAGCTAAGTTAATGACAATTTCTTGATTTCATTGTGGTGGTCCTCAAAAACAGGGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAGGTGACAACGTTGTTTCTTATGTAACAATTCGTTTTCCCTATCCTGTACACTCATGTGTATATACACACACATGCAGGGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAGCTAGTACATCCGTGCCAATTATTTTGTCTAGTCTTTTACTTTGGCACGAAATTTTAAGAAAATTAAGAAA</genome_strand>
        <mrna_strand>TTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGAT...............................................................................AACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAG.........................................................................CACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG.............................................................................................................................................................ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAG............................................................................GGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAGCTAGTACATCCGTGCCAATTATTTTGTCTAGTCTTTTACTTTGGCACGAAATTTTAAGAAAATTAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322314" ref_strand="+" ref_description="SGN-E322314 [cTOB-24-A18]">
      <seq>gtgaatccatggaatataacagaggttgctgcttcgattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgcatgtgactacgcatactgctcaagaatgggctgagacttttgtgagtgaactaaatgatactgttattgaagctcaacagaggataagaaaagttccgccccggcttaacatcagtgatgcaattgagcgctattcgttttccaataatcgactactaatattgggtttcaattctacactgacagaatcggtggatacccctggaagaagaggtggagatcaaatcaaagaaatggaactgaaattgcatcctgagttgaaagaatcattgctcgcgatttgtaacgacccaaagacaacagtcgttgtcctcagtggaagtgatagaaacgtcttagatgataacttcagcgagtacaacatgtggttagcagcagaaaatggaatgtttttacgatctacaaacggtgtatggatgacaactatgccagaacacctaaacatggactgggttgatagtgttaagcacgttttcgagtacttcactgaaaggacaccgagatctcactttgaacaacgtgaaacttcacttgtttggaattacaagtatgcagatgttgaatttggaagatgcaagctagagacatgcttcagcatctctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="9971" stop="12670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10271" g_stop="10416" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10959" g_stop="11076" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="264" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11077" i_stop="11620" i_length="544">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11621" g_stop="11800" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="444" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79">
            <donor d_prob="0.220" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11880" g_stop="12002" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="567" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12076" g_stop="12163" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="655" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="12321" g_stop="12370" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="704" r_length="49" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E322314" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10271" e_stop="10416"/>
          <exon e_start="10959" e_stop="11076"/>
          <exon e_start="11621" e_stop="11800"/>
          <exon e_start="11880" e_stop="12002"/>
          <exon e_start="12076" e_stop="12163"/>
          <exon e_start="12321" e_stop="12370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTGGTATAACTCGCTCCTTCTTTAAAAATATTTGCCTGAAACTCTTACTTATACAGAAGCTTACAGTTGACTTCTTTACTTCCTTAATGACTCTGACATTGATGATAAATTTTTGAGCGTTGAAGAGTTCATATATTGCAGAAAGTCTATATATATGGCTTTAGATGTTGAATAACGTTTGTGGAAAAATCCTATGCAAATTTGAATAGCATTCCAACTATGTGTTTGAATTTGACATGTGCGCTTGAGTCCAAGTTGGTGCTGCTTTTGTTTGCATATTTGAGCAAAGGGATCTAGGACGCTATCATGATTAGGGGCCTTGATGATCTGGGTAGACATTTGTGTTAAGGGGTTATACATATGGTGAAGAGTGGATGCAGCCTCCCCTCCCCCATTGCCTTTCTGAGGGAACTTAAGCTCTAAGCCAAATTTTGTGCGATATTATATTCTTTTCGAATTCAATTTTCTTTTCTTTGATCAGTATATGCAGCAACTAGCTAAGTTAATGACAATTTCTTGATTTCATTGTGGTGGTCCTCAAAAACAGGGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGG</genome_strand>
        <mrna_strand>GTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGAT...............................................................................AACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAG.........................................................................CACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG.............................................................................................................................................................ATGTTGAATTTGGAAGA-TGCAAGCTAGAGACATGCTTCAGCATCTCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322708" ref_strand="+" ref_description="SGN-E322708 [cTOB-26-P15]">
      <seq>gtgaatccatggaatataacagaggttgctgcttcgattgggcaagctttaaatatgtcagctgaagaaagagaaaaacgccacaggcataactttctgcgtgtgactacgcatactgctcaagaatgggctgagacttttgtgagtgaactaaatgatactgttattgaagctcgacagaggataagaaaagttccgccccggcttaacatcagtgatgcaattgagcgctattcgttttccaataatcgactactaatattgggtttcaattctacactgacagaatcggtggatacccctggaagaagaggtggagatcagatcaaagaaatggaactgagattgcatcctgagttgagagaatcattgctcacgatttgtaacgacccaaagacaacagtcgttgtcctcagtggaagtgatagatacgtcttagatgataacttcagcgagtacaacatgtggttagcagcatactatggaatgttcttacgatctacaaacggtgtatggatgacgactatgccagaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="9971" stop="12272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10271" g_stop="10416" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10959" g_stop="11076" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="264" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11077" i_stop="11620" i_length="544">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11621" g_stop="11800" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="444" r_length="180" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79">
            <donor d_prob="0.220" d_score="0.98"/>
            <acceptor a_prob="0.925" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11880" g_stop="11972" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="537" r_length="93" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E322708" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10271" e_stop="10416"/>
          <exon e_start="10959" e_stop="11076"/>
          <exon e_start="11621" e_stop="11800"/>
          <exon e_start="11880" e_stop="11972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTGGTATAACTCGCTCCTTCTTTAAAAATATTTGCCTGAAACTCTTACTTATACAGAAGCTTACAGTTGACTTCTTTACTTCCTTAATGACTCTGACATTGATGATAAATTTTTGAGCGTTGAAGAGTTCATATATTGCAGAAAGTCTATATATATGGCTTTAGATGTTGAATAACGTTTGTGGAAAAATCCTATGCAAATTTGAATAGCATTCCAACTATGTGTTTGAATTTGACATGTGCGCTTGAGTCCAAGTTGGTGCTGCTTTTGTTTGCATATTTGAGCAAAGGGATCTAGGACGCTATCATGATTAGGGGCCTTGATGATCTGGGTAGACATTTGTGTTAAGGGGTTATACATATGGTGAAGAGTGGATGCAGCCTCCCCTCCCCCATTGCCTTTCTGAGGGAACTTAAGCTCTAAGCCAAATTTTGTGCGATATTATATTCTTTTCGAATTCAATTTTCTTTTCTTTGATCAGTATATGCAGCAACTAGCTAAGTTAATGACAATTTCTTGATTTCATTGTGGTGGTCCTCAAAAACAGGGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACAC</genome_strand>
        <mrna_strand>GTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCGTGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTAAATGATACTGTTATTGAAGCTCGACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAGATCAAAGAAATGGAACTGAGATTGCATCCTGAGTTGAGAGAATCATTGCTCACGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGATACGTCTTAGATGAT...............................................................................AACTTCAGCGAGTACAACATGTGGTTAGCAGCATACTATGGAATGTTCTTACGATCTACAAACGGTGTATGGATGACGACTATGCCAGAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614255" ref_strand="-" ref_description="SGN-E614255 [64039]">
      <seq>agaaagagaaaaacgccacaggcataactttctgcatgtgactacccatactgctcaagaatgggctgagacttttgtgagtgaactaaatgatactgttattgaagctcaacagaggataagaaaagttccgccccggcttaacatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="10036" stop="11327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10336" g_stop="10416" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10959" g_stop="11027" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="150" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E614255" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>150</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614255" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="10336" e_stop="10416"/>
          <exon e_start="10959" e_stop="11027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAGGTAAGAAGACATTAAGAGAGTAAAGCTAACACAGAATTCACATTATCACTGCCACTTATGAGAGAACCTCTTGAATTATTCTTCGGACTCCTGTAAAAACACTTTGTGGCGGCGAATGAGTAATAATAGTATAATGCCATGCAATGAGACCCCACTGTTTTACTTTGGCCCCAGCTTATTCCTCAGGATTTATATATTTGTATTATTGGAGTCATTAAAATTCATCTACAGCCAGCCTGTTTATAGCTAGGGATCTTATGTCAGAATGTGCAAACTCTCATTGAGGGTACGCCTACCTTGAGAATGATTAGAGGCATCATCTTATATAGTTTGCATATCTACCTTAGTCATTTCTGTGTTTAGTTTTACTGCTTCTCTTGATATTAAACAACACTCTTTTTATCAACTGTGTTAATCACTCATCAGCACAGATACTATAAGCATAATTCAACAATTGTCATGTTAACTGAGATTATACTTGAAGCTTTTAAAGGGGCTTCATTTTGATAAACTATCTTAGTAACTATTCCTCTTCTTTGCAGTGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAG</genome_strand>
        <mrna_strand>AGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACCCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448102" ref_strand="+" ref_description="SGN-E448102 [cSTS-1-B6]">
      <seq>ggcttaacatcagtgatgcaattgagcgctattcgttttccaataatcgtctactaatattgggtttcaattctacactgacagaatcggtggatacccctggaagaagaggtggagatcaaatcaaagaaatggaactgaaattgcatcctgagttgaaagaatcattgctcgcgatttgtaacgacccaaagacaacagtcgttgtcctcagtggaagtgatagaaacgtcttagatgataacttcagcgagtacaacatgtggttagcagcagaaaatggaatgtttttgcgatctacaaacggtgtatggatgacaaccatgccagaacacctaaacatggactgggttgatagtgtaaagcacgtcttcgagtacttcactgaaaggacaccgagatctcactttgaacaacgtgaaacttcacttgtttggaattacaagtatgcagatgttgaatttggaagattgcaagctagagacatgcttcagcatctctggacaggtccaatatcaaatgcatctgttgatgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="10715" stop="12705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11015" g_stop="11076" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11077" i_stop="11620" i_length="544">
            <donor d_prob="0.964" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11621" g_stop="11800" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="242" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79">
            <donor d_prob="0.220" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11880" g_stop="12002" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="365" r_length="123" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73">
            <donor d_prob="0.924" d_score="0.96"/>
            <acceptor a_prob="0.785" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12076" g_stop="12163" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="453" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12321" g_stop="12405" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="538" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E448102" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11015" e_stop="11076"/>
          <exon e_start="11621" e_stop="11800"/>
          <exon e_start="11880" e_stop="12002"/>
          <exon e_start="12076" e_stop="12163"/>
          <exon e_start="12321" e_stop="12405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTGGTATAACTCGCTCCTTCTTTAAAAATATTTGCCTGAAACTCTTACTTATACAGAAGCTTACAGTTGACTTCTTTACTTCCTTAATGACTCTGACATTGATGATAAATTTTTGAGCGTTGAAGAGTTCATATATTGCAGAAAGTCTATATATATGGCTTTAGATGTTGAATAACGTTTGTGGAAAAATCCTATGCAAATTTGAATAGCATTCCAACTATGTGTTTGAATTTGACATGTGCGCTTGAGTCCAAGTTGGTGCTGCTTTTGTTTGCATATTTGAGCAAAGGGATCTAGGACGCTATCATGATTAGGGGCCTTGATGATCTGGGTAGACATTTGTGTTAAGGGGTTATACATATGGTGAAGAGTGGATGCAGCCTCCCCTCCCCCATTGCCTTTCTGAGGGAACTTAAGCTCTAAGCCAAATTTTGTGCGATATTATATTCTTTTCGAATTCAATTTTCTTTTCTTTGATCAGTATATGCAGCAACTAGCTAAGTTAATGACAATTTCTTGATTTCATTGTGGTGGTCCTCAAAAACAGGGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGT</genome_strand>
        <mrna_strand>GGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGTCTACTAATATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGAT...............................................................................AACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTGCGATCTACAAACGGTGTATGGATGACAACCATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTAAAG.........................................................................CACGTCTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG.............................................................................................................................................................ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E612728" ref_strand="+" ref_description="SGN-E612728 [62494]">
      <seq>tttcaattctacactgacagaatcggtggattacccctggaagaagaggtggagatcaaatcaaagaaatggaactgaaattgcatcctgagttgaaagaatcattgctcgcgatttgtaacgacccaaagacaacagtcgttgtcctcagtggaagtgatagaaacgtcttagatgataacttcagcgagtacaacatgtggttagcagcagaaaatggaatgtttttgcgatctacaaacggtgtatggatgacaaccatgccagaacacctaaacatggactgggttgatagtgtaaagcacgtcttcgaatacttcactgaaaggacaccgagatctcactttgaacaacgtgaaacttcacttgtttggaattacaagtatgcagatgttgaatttggaagattgcaagctagagacatgcttcagcatctctggacaggtccaatatcaaatgcatctgttgatgttgtacaaggactccgctccgttgaggtccgagcagttggtgttacaaagggagcagcgatagatcgtatactgggggagatcgtacacagtaaagccattgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgccattggtatgccaagaagtaaggtcagtgatgcacctaaggtgccccgggaaaggcgatcagttccaaaattccctttctagtcgaactaagtcaaagtcattctcagaattaggaacaggccagtttcaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="11323" stop="13361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11623" g_stop="11800" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79">
            <donor d_prob="0.220" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11880" g_stop="12002" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="302" r_length="123" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73">
            <donor d_prob="0.924" d_score="0.96"/>
            <acceptor a_prob="0.785" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="12163" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="390" r_length="88" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12321" g_stop="12451" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="521" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12452" i_stop="12527" i_length="76">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12528" g_stop="12626" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="620" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="12882" g_stop="13061" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="804" r_length="184" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E612728" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E612728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11623" e_stop="11800"/>
          <exon e_start="11880" e_stop="12002"/>
          <exon e_start="12076" e_stop="12163"/>
          <exon e_start="12321" e_stop="12451"/>
          <exon e_start="12528" e_stop="12626"/>
          <exon e_start="12882" e_stop="13061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTCTACACTGACAGAATCGGTGGA-TACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGATGTATTGCCTTACAACTAGCAATATTTCAATTCCCTCAACTGTAGCGACGTTTCCCCATGTGAAATTTGTACTTTTGCAGAACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAGGTGACAACGTTGTTTCTTATGTAACAATTCGTTTTCCCTATCCTGTACACTCATGTGTATATACACACACATGCAGGGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTG-CATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCC-TTCTAGTCGAACTAGCTCAAAGTCA-TCTCAGAA-TAGGAACAGACCAGTTTCAAACTCG</genome_strand>
        <mrna_strand>TTTCAATTCTACACTGACAGAATCGGTGGATTACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGAT...............................................................................AACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTGCGATCTACAAACGGTGTATGGATGACAACCATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTAAAG.........................................................................CACGTCTTCGAATACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG.............................................................................................................................................................ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTCCGAGCAGTTGGTGTTACAAAG............................................................................GGAGCAGCGATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATTGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCCATTGGTATGCCAAGAAGTAAGGTCAGTGATGCACCTAAGGTGCCCCGGGAAAGGCGATCAGTTCCAAAATTCCCTTTCTAGTCGAACTAAGTCAAAGTCATTCTCAGAATTAGGAACAGGCCAGTTTCAAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474528" ref_strand="+" ref_description="SGN-E474528 [cSTB-36-H14]">
      <seq>aatgtttttgcgatctacaaactgtgtatggatgacaaccatgccagaacacctaaacatggactgggttgatagtgtaaagcacgtcttcgagtacttcactgaaaggacaccgagatctcactttgaacaacgtgaaacttcacttgtttggaattacaagtatgcagatgttgaatttggaagattgcaagctagagacatgcttcagcatctctggacaggtccaatatcaaatgcatctgttgatgttgtacaaggactccgctccgttgaggtccgagcagttggtgttacaaagggagcagcaatagatcgtatactgggggagatcgtacacagtaaagccattgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcattggtatgccaagaagtaaggtcagtgatgcacctaaggtgcctggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacaggccagtttcaaactcggataagaaaacttccaatggacgacgaccctcacctgaaaatgtgtcgtggaatgtgctggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="11621" stop="13424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11921" g_stop="12002" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73">
            <donor d_prob="0.924" d_score="0.96"/>
            <acceptor a_prob="0.785" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12076" g_stop="12163" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="170" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12321" g_stop="12451" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="301" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12452" i_stop="12527" i_length="76">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12528" g_stop="12626" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="400" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12882" g_stop="13124" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="643" r_length="243" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E474528" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11921" e_stop="12002"/>
          <exon e_start="12076" e_stop="12163"/>
          <exon e_start="12321" e_stop="12451"/>
          <exon e_start="12528" e_stop="12626"/>
          <exon e_start="12882" e_stop="13124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAGGTATGATCATGTGTAGCTATGTTCTGGTAGTGCATCTTTCAGCTCTAACTTCTCTTGTCTTGACAATATTCAGCACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAGGTGACAACGTTGTTTCTTATGTAACAATTCGTTTTCCCTATCCTGTACACTCATGTGTATATACACACACATGCAGGGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGAT</genome_strand>
        <mrna_strand>AATGTTTTTGCGATCTACAAACTGTGTATGGATGACAACCATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTAAAG.........................................................................CACGTCTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG.............................................................................................................................................................ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTCCGAGCAGTTGGTGTTACAAAG............................................................................GGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATTGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATTGGTATGCCAAGAAGTAAGGTCAGTGATGCACCTAAGGTGCCTGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGGCCAGTTTCAAACTCGGATAAGAAAACTTCCAATGGACGACGACCCTCACCTGAAAATGTGTCGTGGAATGTGCTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739584" ref_strand="+" ref_description="SGN-E739584 [LC18AB06]">
      <seq>ctttacttgtttggaattacaagtatgcagatgttgaatttggaagattgcaagctagagacatgcttcagcatctctggacaggtccaatatcaaatgcatctgttgatgttgtacaaggactccgctccgttgaggttcgagcagttggtgttacaaagggagcagcaatagatcgtatactgggggagatcgtacacagtaaagccatcgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcatcggtatgccaagaagtaaggtcagtgatgcaccaaaggtgcccggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacagaccagtttcaaactcggataagaagacttccaatgggcgacggccctcacctgaaaatgtgtcatggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggaaggactcgtacaaacgctcggtatctgctcagtacgccagacgacgttgttgcttttctaagggaactagctgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgcctggttgcatcaagtgatgaatgatcagtaccaagttcttggttgagggagatttgtatgggatgatattgaataaacgttttatacctttactttggatatagatgtttgcattcaaaagtttacaaagtagagagaataaccttcatgctagcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="11834" stop="13741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12134" g_stop="12163" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12321" g_stop="12451" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="161" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12452" i_stop="12527" i_length="76">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12528" g_stop="12626" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="260" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12882" g_stop="13441" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="820" r_length="560" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E739584" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E739584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12134" e_stop="12163"/>
          <exon e_start="12321" e_stop="12451"/>
          <exon e_start="12528" e_stop="12626"/>
          <exon e_start="12882" e_stop="13441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACTTGTTTGGAATTACAAGTATGCAGGTGATCTTACTTTCATCATCCATTTTCGAGATTTTTCAGTCATGCATTTCTTGTTTGTAGCTATTCAAAGTTTAGTCTTGCCTTCAATTCTCTTTTTCCTTTTTTCCTTTTTCTTTAAACATTTCTTCCTTTTGGTGGGGGTTCTTCCATGTCCTAGATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAGGTGACAACGTTGTTTCTTATGTAACAATTCGTTTTCCCTATCCTGTACACTCATGTGTATATACACACACATGCAGGGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAGCTAGT</genome_strand>
        <mrna_strand>CTTTACTTGTTTGGAATTACAAGTATGCAG.............................................................................................................................................................ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAG............................................................................GGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAGCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E595011" ref_strand="-" ref_description="SGN-E595011 [38275]">
      <seq>cagcaatagatcgtatactgggggagatcgtacacagtaaagccattgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcattggtatgccaagaagtaaggtcagtgatgcacctaaggtgcccggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacaggccagtttcaaactcggataagaaaacttccaatggacgacggccctcacctgaaaatgtgtcatggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggcaggactcgtacaaatgctcggtatctgctcaatacacctgacgatgttgttgcttttctaagggaactagctgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgctggttgcatcaagtgatgaatgatcggtaccaagttcttgattgagggagatttgtatgggatgatattgaataaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="12232" stop="13660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12532" g_stop="12626" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12882" g_stop="13360" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="573" r_length="478" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E595011" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E595011" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12532" e_stop="12626"/>
          <exon e_start="12882" e_stop="13360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAAC</genome_strand>
        <mrna_strand>CAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATTGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATTGGTATGCCAAGAAGTAAGGTCAGTGATGCACCTAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGGCCAGTTTCAAACTCGGATAAGAAAACTTCCAATGGACGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGCAGGACTCGTACAAATGCTCGGTATCTGCTCAATACACCTGACGATGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATG-CTGGTTGCATCAAGTGATGAATGATCGGTACCAAGTTCTTGATTGAGGGAGATTTGTATGGGATGATATTGAATAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738959" ref_strand="+" ref_description="SGN-E738959 [LC15CD11]">
      <seq>cgtatactgggggagatcgtacacagtaaagccatcgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcatcggtatgccaagaagtaaggtcagtgatgcaccaaaggtgcccggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacagaccagtttcaaactcggataagaagacttccaatgggcgacggccctcacctgaaaatgtgtcatggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggaaggactcgtacaaacgctcggtatctgctcagtacgccagacgacgttgttgcttttctaagggaactagctgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgcctggttgcatcaagtgatgaatgatcagtaccaagttcttggttgagggagatttgtatgggatgatattgaataaacgttttatacctttactttggatatagatgtttgcattcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="12243" stop="13702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12543" g_stop="12626" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12882" g_stop="13411" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="614" r_length="530" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E738959" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12543" e_stop="12626"/>
          <exon e_start="12882" e_stop="13411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAA</genome_strand>
        <mrna_strand>CGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740929" ref_strand="+" ref_description="SGN-E740929 [LC23CB03]">
      <seq>cgtatactgggggagatcgtacacagtaaagccatcgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcatcggtatgccaagaagtaaggtcagtgatgcaccaaaggtgcccggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacagaccagtttcaaactcggataagaagacttccaatgggcgacggccctcacctgaaaatgtgtcatggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggaaggactcgtacaaacgctcggtatctgctcagtacgccagacgacgttgttgcttttctaagggaactagctgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgcctggttgcatcaagtgatgaatgatcagtaccaagttcttggttgagggagatttgtatgggatgatattgaataaacgttttatacctttactttggatatagatgtttgcattcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="12243" stop="13702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12543" g_stop="12626" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12882" g_stop="13411" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="614" r_length="530" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E740929" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12543" e_stop="12626"/>
          <exon e_start="12882" e_stop="13411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAA</genome_strand>
        <mrna_strand>CGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431632" ref_strand="-" ref_description="SGN-E431632 [STM-55-F2]">
      <seq>agtaaagccattgcaacaccaattgattacgttttatgcatagggcattttctggggaaggatgaggatgtatatacattttttgagccagagcttccttctgactgcattggtatgccaagaagtaaggtcagtgatgcacctaaggtgcctggggaaaggcgatcagttccaaaactcccttctagtcgaactagctcaaagtcatctcagaataggaacaggccagtttcaaactcggataagaaaacttccaatggacgacgaccctcacctgaaaatgtgtcgtggaatgtgctggatctgaagaaggagaattacttctcttgtgcagttggcaggactcgtacaaatgctcggtatctgctcaatacgcctgacgatgttgttgcttttctaagggaactaggtgaagcacctatttcaaatgggacatcatgaaaaagaaggatagatgatgctggttgcatcaagtgatgaatgatcggtaccaagttcttgattgagggagatttgtatgggatgatattgaataaacgttttataccttctttgctttggatatagatgtttgcattcaatagtctacaaagtaaagaaaataaccttcatgctagcacatactccatccgtgtcaattattctgtctaatctttgacttggcacgaagtttaagaaaattttgtattcttaaaaaaaaaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="12267" stop="13737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12567" g_stop="12626" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12882" g_stop="13497" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="679" r_length="619" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E431632" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431632" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12567" e_stop="12626"/>
          <exon e_start="12882" e_stop="13497"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAGGTAAATTCTTTGAAGCCTTCAAAATGTCGTCACTTCAAATTAGTATTGCTATTGCTGTGAGCTTTGACCTTTATAATTCAGAGTAACCCCTGTCTGTTTAACTAGTTCCAGATTTTGATAAAGTAATCCGACTTCATCTTTCAAAAATTAAGTCGGATAGGTTGATCATTTGCATCTGTATCTTGAATTTTGATGCTGTTGTAAGCACTGTCCATTATATTGCTACACTTACGTCTGTTGCCTTTGTAAATATAGGATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATA-C--CTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAG--C-TAGTACATCCGTGCCAATTATTTTGTCTAGTCTTTTACTTTGGCACGAAATTTTAAGAAA</genome_strand>
        <mrna_strand>AGTAAAGCCATTGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG...............................................................................................................................................................................................................................................................GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATTGGTATGCCAAGAAGTAAGGTCAGTGATGCACCTAAGGTGCCTGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGGCCAGTTTCAAACTCGGATAAGAAAACTTCCAATGGACGACGACCCTCACCTGAAAATGTGTCGTGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGCAGGACTCGTACAAATGCTCGGTATCTGCTCAATACGCCTGACGATGTTGTTGCTTTTCTAAGGGAACTAGGTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATG-CTGGTTGCATCAAGTGATGAATGATCGGTACCAAGTTCTTGATTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTCTTTGCTTTGGATATAGATGTTTGCATTCAATAGTCTACAAAGTAAAGAAAATAACCTTCATGCTAGCACATACTCCATCCGTGTCAATTATTCTGTCTAATCTTTGAC-TTGGCACG-AAGTTTAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711999" ref_strand="+" ref_description="SGN-E711999 [FB03CD10]">
      <seq>cgcatttagtggtcaacattcccaacagcatgacgattttggatgagcttcttccaatttcaatcgagatggcaaagcgtaatctcacaggcatatggaatttcacaaaccctggtgttgtgagccataacgagatcttggagatgtacaagaaatacataaacccagaatttaaatggtccaacttcacactggaagagcaggctaaggtaattgttgcacctcgcagtaacaatgaaatggacgcgtccaagttgaaaaaggagttccctgagttgttgtctatcaaagaatcattgatcaaaaatgtgtttgaaccaaatagaaaaacttctgcatgagaagcccatcaggatgtggagagcagacttctggtttggatcaatatgctacttgactttctactctagtttagtcattattagccatcattttaaaatatttaggttcttactggtgtctagaattcctacacttggtctatgttgtcagtttatttatgagtttaatgtgctataaggtggtttgcgtaggagttaccattcatcttttatcagctcgggtcgatttgttggatcttaatatatatgaaattatgattaacaaaaaaaaaacacacaacaaaaaacaacaatcacaaaaataaaattacttcggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="14744" stop="13547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14447" g_stop="13846" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="602" r_length="602" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E711999" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14447" e_stop="13846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATAAAGTGGTCAACATTCCCAACAGCATGACGATTTTGGATGAGCTTCTTCCAATTTCAATCGAGATGGCAAAGCGTAATCTCACAGGCATATGGAATTTCACAAACCCTGGTGTTGTGAGCCATAACGAGATCTTGGAGATGTACAAGAAATACATAAACCCAGAATTTAAATGGTCCAACTTCACACTGGAAGAGCAGGCTAAGGTAATTGTTGCACCTCGCAGTAACAATGAAATGGACGCGTCCAAGTTGAAAAAGGAGTTCCCTGAGTTGTTGTCTATCAAAGAATCATTGATCAAAAATGTGTTTGAACCAAATAGAAAAACTTCTGCATGAGAAGCCCATCAGGATGTGGAGAGCAGACTTCTGGTTTGGATCAATATGCTACTTGACTTTCTACTCTAGTTTAGTCATTATTAGCCATCATTTTAAAATATTTAGGTTCTTACTGGTGTCTAGAATTCCTACACTTGGTCTATGTTGTCAGTTTATTTATGAGTTTAATGTGCTATAAGGTGGTTTGCGTAGGAGTTACCATTCATCTTTTATCAGCTCGGGTCGATTTGTTGGATCTTAATATATATGAAATTATGATTT</genome_strand>
        <mrna_strand>CGCATTTAGTGGTCAACATTCCCAACAGCATGACGATTTTGGATGAGCTTCTTCCAATTTCAATCGAGATGGCAAAGCGTAATCTCACAGGCATATGGAATTTCACAAACCCTGGTGTTGTGAGCCATAACGAGATCTTGGAGATGTACAAGAAATACATAAACCCAGAATTTAAATGGTCCAACTTCACACTGGAAGAGCAGGCTAAGGTAATTGTTGCACCTCGCAGTAACAATGAAATGGACGCGTCCAAGTTGAAAAAGGAGTTCCCTGAGTTGTTGTCTATCAAAGAATCATTGATCAAAAATGTGTTTGAACCAAATAGAAAAACTTCTGCATGAGAAGCCCATCAGGATGTGGAGAGCAGACTTCTGGTTTGGATCAATATGCTACTTGACTTTCTACTCTAGTTTAGTCATTATTAGCCATCATTTTAAAATATTTAGGTTCTTACTGGTGTCTAGAATTCCTACACTTGGTCTATGTTGTCAGTTTATTTATGAGTTTAATGTGCTATAAGGTGGTTTGCGTAGGAGTTACCATTCATCTTTTATCAGCTCGGGTCGATTTGTTGGATCTTAATATATATGAAATTATGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449328" ref_strand="+" ref_description="SGN-E449328 [cSTS-6-K5]">
      <seq>caataatcctgattggtggggagatgtctctggggcactgcttccccatcctagaatgccgatgatgcctggtggggtagagagaaattggtatggagctgaaaaagatgattctggatcatctgacgtctcaggaaacgccaaccataccagaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagttcttgatatatggtaagactgggtggattggtggtctcctaaacaaactgtgtgagaaacagggaattccttatgagtatggaaagggacgcctggaggatcgctcacaacttttgtcaacacattcatgctgtgaagcccacacatgtattcaacgctgctggtgtcactggtaggcccaatgatgattggtgtgagagtcataagactgcaaccctccgctctaatgttgctggaactctaaacttggcagatgtttgcaaggagaatggtttactaatgatgaattatgcaaccggttgcatattcgaatacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15555" stop="14429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15255" g_stop="14729" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E449328" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15255" e_stop="14729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTC-AGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAAGAGAATGGTTTACTGATGATGAATTTTGCAACCGGTTGCATATTCGAATATGATG</genome_strand>
        <mrna_strand>CAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCACTGCTTCCCCATCCTAGAATGCCGATGATGCCTGGTGGGGTAGAGAGAAATTGGTATGGAGCTGAAAAAGATGATTCTGGATCATCTGACGTCTCAGGAAACGCCAACCATACCAGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTCTTGATATATGGTAAGACTGGGTGGATTGGTGGTCTCCTAAACAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGCCTGGAGGATCGCTCACAACTTTTGTCAACACATTCATGCTGTGAAGCCCACACATGTATTCAACGCTGCTGGTGTCACTGGTAGGCCCAATGATGATTGGTGTGAGAGTCATAAGACTGCAACCCTCCGCTCTAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGCAAGGAGAATGGTTTACTAATGATGAATTATGCAACCGGTTGCATATTCGAATACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447543" ref_strand="+" ref_description="SGN-E447543 [cSTA-27-E18]">
      <seq>tttggatggagctgaaaaagatgattctggatcatctgaaatctcaggaaacgccaaccataccggaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagtttttgatttatggtacgactgggtggattggtggtctcctaagcaaactgtgtgagaaacagggaattccttatgagtatggaaagggacgtctggaggatcgctcacaacttttgtcagacattcatgctgtgaagcccacacatgtattcaacgctgctggtgtcactggtaggcccaatgttgattggtgtgagagtcataagactgaaacaatccgtacgaatgttgctggaactctaaacttggcagatgtttgtcaggagaatggtctactaatgatgaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15468" stop="14458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15168" g_stop="14758" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E447543" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15168" e_stop="14758"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAAGAGAATGGTTTACTGATGATGAATTT</genome_strand>
        <mrna_strand>TTTGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAAATCTCAGGAAACGCCAACCATACCGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTTTTGATTTATGGTACGACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAACGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACGAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTCAGGAGAATGGTCTACTAATGATGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477218" ref_strand="+" ref_description="SGN-E477218 [cSTB-47-F11]">
      <seq>cctagatgatcagaagttgaagaacctgggttggtccgagaagaccacctgggaagagggtctgaaaaaaacgatggattggtacgtcaataatcctgattggtggggagatgtctctggggcattgcttccccatcctagaatgctgatgatgcctggtgaggttgagagaaatttggatggagctgaaaaagatgattctggatcatctgaaatctcaggaaacgccaaccataccggaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagtttttgatttatggtaagactgggtggattggtggtctcctaagcaaactgtgtgagaaacagggaattccttatgagtatggaaagggacgtctggaggatcgctcacaacttttgtcagacattcatgctgtgaagcccacacatgtattcaacgctgctggtgtcactggtaggcccaatgttgattggtgtgagagtcataagactgaaacaatccgtacgaatgttgctggaactctaaacttggcagatgtttgtaaggagaatggtttactaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15642" stop="14463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15342" g_stop="14763" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E477218" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15342" e_stop="14763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAAGAGAATGGTTTACTGATGATG</genome_strand>
        <mrna_strand>CCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTACGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGAGGTTGAGAGAAATTTGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAAATCTCAGGAAACGCCAACCATACCGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTTTTGATTTATGGTAAGACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAACGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACGAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAGGAGAATGGTTTACTAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448731" ref_strand="+" ref_description="SGN-E448731 [cSTS-4-E14]">
      <seq>cgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtccgagaagaccacctgggaagagggtctgaaaaaaacgatggattggtacgtcaataatcctgattggtggggagatgtctctggggcattgcttccccatcctagaatgctgatgatgcctggtgaggttgagagaaatttggatggagctgaaaaagatgattctggatcatctgaaatctcaggaaacgccaaccataccggaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagtttttgatttatggtaggactgggtggattggtggtctcctaagcaaactgtgtgagaaacagggaattccttatgagtatggaaagggacgtctggaggatcgctcacaacttttgtcagacattcatgctgtgaagcccacacatgtattcaacgctgctggtgtcactggtaggcccaatgttgattggtgtgagagtcataagactgaaacaatccgtacgaatgttgctggaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15693" stop="14507"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15393" g_stop="14807" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E448731" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15393" e_stop="14807"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTTGCTGGAACTC</genome_strand>
        <mrna_strand>CGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTACGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGAGGTTGAGAGAAATTTGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAAATCTCAGGAAACGCCAACCATACCGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTTTTGATTTATGGTAGGACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAACGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACGAATGTTGCTGGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572852" ref_strand="+" ref_description="SGN-E572852 [32071]">
      <seq>ttttaacaaggatccagacgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtccgagaagaccacctgggaagagggtcttacaaaaacgatggattggtatgtcaataatcctgattggtggggagatgtctctggggcattgcttccccatcctagaatgctgatgatgcctggtggggtagagagaaatttggatggagctgaaaaagatgattctggatcatctgagatctcaggaaacgccaaacataccggaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagtttttgatttatggtaggactgggtggattggtggtctcctaagcaaactgtgtgagaaacagggaattccttatgagtatggaaagggacgtctggaggatcgctcacaacttttgtcagacattcatgctgtgaagcccacacatgtattcaacgctgctggtgtcactggtaggcccaatgttgattggtgtgagagtcataagactgaaacaatccgtacgaatgttgctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15711" stop="14511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15411" g_stop="14811" g_length="601"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E572852" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572852" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15411" e_stop="14811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTTGCTGGA</genome_strand>
        <mrna_strand>TTTTAACAAGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTTACAAAAACGATGGATTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTTGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACGCCAAACATACCGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTTTTGATTTATGGTAGGACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAACGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACGAATGTTGCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455724" ref_strand="+" ref_description="SGN-E455724 [cSTS-27-K5]">
      <seq>ttggtcactgtttacaacatcgggaccaagaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacaaggatccagacgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtccgagaagaccacctgggaagagggtctgaaaaaaacgatggattggtacgtcaataatcctgattggtggggagatgtctctggggcattgcttccccatcctagaatgctgatgatgcctggtgaggttgagagaaatttggatggagctgaaaaagatgattctggatcatctgaaatctcaggaaacgccaaccataccggaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagtttttgatttatggtacgactgggtggattggtggtctcctaagcaaactgtgtgagaaacagggaattccttatgagtatggaaagggacgtctggaggatcgctcacaacttttgtcagacattcatgctgtgaagcccacacatgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15784" stop="14598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15484" g_stop="14898" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E455724" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E455724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15484" e_stop="14898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTCA-TGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTA</genome_strand>
        <mrna_strand>TTGGTCACTGTTTACAACATCGGGACCAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTACGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGAGGTTGAGAGAAATTTGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAAATCTCAGGAAACGCCAACCATACCGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTTTTGATTTATGGTACGACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E446210" ref_strand="+" ref_description="SGN-E446210 [cSTA-20-G18]">
      <seq>ttcaaatgttagaagttatctctattgtgaagatgttgctgaggctttcgaagttgttcttcaccgaggtgatgttggtcatgtttataacatcgggactaagaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacaaggatccagacgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtccgagaagaccacctgggaagagggtctgaaaaaaacgatggattggtatgtcaataatcctgattggtggggagatgtctctggggcattgcttccccatcctagaatgctgatgatgcctggtggggtagagagaaatttggatggagctgaaaaagatgattctggatcatctgagatctcaggaaacgccaaccataccggaatggtagttccagcttccaagatcagcaactcccctagtaaatcaccttataagtttttgatatatggtaggactgggtggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15858" stop="14719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15558" g_stop="15019" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E446210" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15558" e_stop="15019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGAT</genome_strand>
        <mrna_strand>TTCAAATGTTAGAAGTTATCTCTATTGTGAAGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTTGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACGCCAACCATACCGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAAATCACCTTATAAGTTTTTGATATATGGTAGGACTGGGTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448784" ref_strand="+" ref_description="SGN-E448784 [cSTS-4-O8]">
      <seq>gcctattatcaccactagagggaacaatgtgtatggtcccaatcaatttcctgagaagctaatcccaaagttcatacttttatctttgcaagggaagcctcttcctattcaaggagatggttcaaatgttagaagttatctctattgtgaggatgttgctgaggctttcgaagttgttcttcaccgaggtgatgttggtcatgtttataacattgggactaagaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacagggatccagacgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtcccagaagaccacctgggaagagggtctgaaaaaaacgatggattggtatgtcaataatcctgattggtggggagatgtctctggggcactgcttccccatcctagaatgccgatgatgcctggtggggtagagagaaattggtatggagctgaaaaagatgattctggatcatctgnagtctcangaaacgccaaccataccagaatggtagttccagcttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15978" stop="14783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15678" g_stop="15083" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E448784" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15678" e_stop="15083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGTTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTAGCTTTGAATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCA</genome_strand>
        <mrna_strand>GCCTATTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTATCTTTGCAAGGGAAGCCTCTTCCTATTCAAGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATTGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAGGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCCAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCACTGCTTCCCCATCCTAGAATGCCGATGATGCCTGGTGGGGTAGAGAGAAATTGGTATGGAGCTGAAAAAGATGATTCTGGATCATCTGNAGTCTCANGAAACGCCAACCATACCAGAATGGTAGTTCCAGCTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E365462" ref_strand="+" ref_description="SGN-E365462 [cLPT-2-B5]">
      <seq>agcctctttcgattcacggagatggttcaaatgttagaagttattctctattgtgaggacgttgctgaagctttcgaagttgttcttcaccgaggtgatgttggtcatgtttataacatcgggactaacaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacaaggatccagacacaagcattcagtttgtggaaaacaggcccttcaatgaccagaggtatttcttagatgatcagaagttgaagaacctcggttggtcagagaagaccacctgggaagagggtctgaaaaaaaccatggagtggtatgtcaacaatcctgattggtggggagatgtctcangggcattgcttccccatcctacaatgctgatgatgcctggtggggtagagagaaattcggatggagctgaaaaaggtgattctggatcatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15883" stop="14831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15583" g_stop="15131" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E365462" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15583" e_stop="15131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTA-TCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTG</genome_strand>
        <mrna_strand>AGCCTCTTTCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATTCTCTATTGTGAGGACGTTGCTGAAGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAACAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCTTAGATGATCAGAAGTTGAAGAACCTCGGTTGGTCAGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAACAATCCTGATTGGTGGGGAGATGTCTCANGGGCATTGCTTCCCCATCCTACAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGGTGATTCTGGATCATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559494" ref_strand="+" ref_description="SGN-E559494 [18999]">
      <seq>attagaggcatgcaaagtttctggtcagatcagaaggtttatacatgttagcactgatgaggtttacggagaaactgatgaagatgctgttgtaggaaaccatgaagcctcgcaacttcttcccacaaacccatattcagccacgaaagctggggctgaaatgcttgttatggcatatgggagatcatatggattgcctattatcaccactagagggaacaatgtgtatggtcccaatcaatttcctgagaagctaatcccaaagttcatacttttatctttgcaagggaagcctcttcctattcaaggagatggttcaaatgttagaagttatctctattgtgaggatgttgctgaggctttcgaagttgttcttcaccgaggtgatgttggtcatgtttataacattgggactaagaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacaggggatccagacgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtcccagaagaccacctgggaagagggtctgaaaaaaacgatggattggtatgtcaataatcctgattggtggggagatgtctctggggcactgcttccccatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="16173" stop="14906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15873" g_stop="15206" g_length="668"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="669" r_length="669" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E559494" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15873" e_stop="15206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAGACTGATGAAGATGCTGTTGTAGGAAATCATGAAGCATCGCAACTTCTCCCCACAAACCCATATTCAGCCACGAAAGCTGGAGCTGAAATGCTTGTTATGGCATATGCAAGATCATATGGATTGCCTGTTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTAGCTTTGAATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACA-AGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATC</genome_strand>
        <mrna_strand>ATTAGAGGCATGCAAAGTTTCTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAAACTGATGAAGATGCTGTTGTAGGAAACCATGAAGCCTCGCAACTTCTTCCCACAAACCCATATTCAGCCACGAAAGCTGGGGCTGAAATGCTTGTTATGGCATATGGGAGATCATATGGATTGCCTATTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTATCTTTGCAAGGGAAGCCTCTTCCTATTCAAGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATTGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAGGGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCCAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCACTGCTTCCCCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560832" ref_strand="+" ref_description="SGN-E560832 [20547]">
      <seq>tcccaaagttcatacttttatctttgcaaggggaagcctcttcctattcaagagatggttcaaatgttagaagttatctctattgtgaggatgttgctgaggctttcgaagttgttcttcaccgaggtgatgttggtcatgtttataacattgggactaagaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacaggggatccagacgcaagcattcagtttgtggagaacaggcccttcaatgaccagaggtatttcctagatgatcagaagttgaagaacctgggttggtcccagaagaccacctgggaagagggtctgaaaaaaacgatggattggtatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="15916" stop="14955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15616" g_stop="15255" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E560832" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15616" e_stop="15255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAAGTTCATACTTTTAGCTTTG-AATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACA-AGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTC</genome_strand>
        <mrna_strand>TCCCAAAGTTCATACTTTTATCTTTGCAAGGGGAAGCCTCTTCCTATTCA-AGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATTGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAGGGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCCAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACGATGGATTGGTATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456718" ref_strand="+" ref_description="SGN-E456718 [cSTS-30-G20]">
      <seq>ctcctttggtaatagctttgagttcaccaagaacaacatttatggcacacacgtgctattagaggcatgcaaagtttctggtcagatcagaaggtttatacatgttagcactgatgaggtttacggagaaactgatgaagatgctgttgtaggaaaccatgaagcctcgcaacttcttcccacaaacccatattcagccacgaaagctggggctgaaatgcttgttatggcatatgggagatcatatggattgcctattatcaccactagagggaacaatgtgtatggtcccaatcaatttcctgagaagctaatcccaaagttcatacttttatctttgcaagggaagcctcttcctattcaaggagatggttcaaatgttagaagttatctctattgtgaggatgttgctgaggctttcgaagttgttcttcaccgaggtgatgttggtcatgtttataacattgggactaagaaagagaggcgagtgattgatgttgccaaagatatatccaatctttttaacagggatccagacgcaagcattcagtttgtggagaacaggcccctcaatgaccagaggtatttcctagatgatcagaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="16230" stop="15026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15930" g_stop="15326" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E456718" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15930" e_stop="15326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAGACTGATGAAGATGCTGTTGTAGGAAATCATGAAGCATCGCAACTTCTCCCCACAAACCCATATTCAGCCACGAAAGCTGGAGCTGAAATGCTTGTTATGGCATATGCAAGATCATATGGATTGCCTGTTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTAGCTTTGAATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGT</genome_strand>
        <mrna_strand>CTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTTCTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAAACTGATGAAGATGCTGTTGTAGGAAACCATGAAGCCTCGCAACTTCTTCCCACAAACCCATATTCAGCCACGAAAGCTGGGGCTGAAATGCTTGTTATGGCATATGGGAGATCATATGGATTGCCTATTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTATCTTTGCAAGGGAAGCCTCTTCCTATTCAAGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGATGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATTGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAGGGATCCAGACGCAAGCATTCAGTTTGTGGAGAACAGGCCCCTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454694" ref_strand="+" ref_description="SGN-E454694 [cSTS-24-G23]">
      <seq>ctttctctctctaaaaatcttttatgtttctcactctttgagaaactcaaaaatagtcaccatatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctgttaatatatttgaaatttgacatcaaaatgtctaactatactccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgccaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagtgctgatcttgttaactaccttctcatgaccgagaacattgacactataatgcactttgctgctcagacccatgtcgacaactcctttggtaatagctttgagttcaccaagaacaacatttatggcacacacgtgctattagaggcatgcaaagtttctggtcagatcagaaggtttatacatgttagcactgatgaggtttacggagaaactgatgaagatgctgttgtaggaaaccatgaagcctcgcaacttcttcccacaaacccatattcagccacgaaaagctgggctgaaatgcttgttatggcatatgggagatcatatggattgcctattatcaccact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17458" stop="15363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17158" g_stop="17054" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.886"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.869" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="15663" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="702" r_length="601" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E454694" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17158" e_stop="17054"/>
          <exon e_start="16260" e_stop="15663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTCTCTCTAAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAGACTGATGAAGATGCTGTTGTAGGAAATCATGAAGCATCGCAACTTCTCCCCACAAACCCATATTCAGCCACG-AAAGCTGGAGCTGAAATGCTTGTTATGGCATATGCAAGATCATATGGATTGCCTGTTATCACCACT</genome_strand>
        <mrna_strand>CTTTCTCTCTCTAAAAA-TCTTTTATGTTTCTCACTCT-T-TGAGAAACTCAAAAAT-AGTCACCATATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTGTTAATATATTTGAAATTTGACATCAAAATGTCTAACTATACTCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATGACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTTCTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAAACTGATGAAGATGCTGTTGTAGGAAACCATGAAGCCTCGCAACTTCTTCCCACAAACCCATATTCAGCCACGAAAAGCTGG-GCTGAAATGCTTGTTATGGCATATGGGAGATCATATGGATTGCCTATTATCACCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E444261" ref_strand="+" ref_description="SGN-E444261 [cSTA-42-C20]">
      <seq>gttaagctttgaatatatttgaaattcgacatcaaaatgtctaactataccccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgcaaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagtgctgatcttgttaactaccttctcatcaccgagaacattgacactataatgcactttgctgctcagacccatgtcgacaactcctttggtaatagctttgagttcaccaagaacaacatttatggcacacacgtgctattagaggcatgcaaagttactggtcagatcagaaggtttatacatgttagcactgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="16525" stop="15515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16247" g_stop="15815" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E444261" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444261" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16247" e_stop="15815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAAGCTCTGAATATATTTG--AT-CGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATG</genome_strand>
        <mrna_strand>GTTAAGCTTTGAATATATTTGAAATTCGACATCAAAATGTCTAACTATACCCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCAAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448633" ref_strand="+" ref_description="SGN-E448633 [cSTS-3-D12]">
      <seq>cgctttctctctctaaaaatcttttatgtttctcactctttgagaaactcaaaaatagtcaccatatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctgttaatatatttgaaatttgacatcaaaatgtctaactatactccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgccaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagtgctgatcttgttaactaccttctcatgaccgagaacattgacactataatgcactttgctgctcagacccatgtcgacaactcctttggtaatagctttgagttcaccaagaacaacatttatggcacacacgtgctattagaggcatgcaaagtttctggtcagatcagaaggtttatacatgttagcactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17460" stop="15516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17160" g_stop="17054" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.869" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="15816" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="551" r_length="448" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E448633" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17160" e_stop="17054"/>
          <exon e_start="16260" e_stop="15816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTTCTCTCTCTAAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGAT</genome_strand>
        <mrna_strand>CGCTTTCTCTCTCTAAA-AATCTTTTATGTTTCTCACTCT-T-TGAGAAACTCAAAAAT-AGTCACCATATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTGTTAATATATTTGAAATTTGACATCAAAATGTCTAACTATACTCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATGACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTTCTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E438987" ref_strand="+" ref_description="SGN-E438987 [cSTA-10-B9]">
      <seq>aaaatcttttatgtttctcactctttgagaaactcaaaaatcgtctccggatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctttgaatatatttgaaattcgacatcaaaatgtctaactataccccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgcaaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagtgctgatcttgttaactaccttctcatcaccgagaacattgacactataatgcactttgctgctcagacccatgtcgacaactcctttggtaatagctttgagttcaccaagaacaacatttatggcacacacgtgctattagaggcatgcaaagttactggtcagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17444" stop="15543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17144" g_stop="17054" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.879"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.869" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="15843" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="509" r_length="421" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E438987" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17144" e_stop="17054"/>
          <exon e_start="16260" e_stop="15843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATC</genome_strand>
        <mrna_strand>AAAATCTTTTATGTTTCTCACTCT-T-TGAGAAACTCAAAAATC-GTCTCCGGATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTTTGAATATATTTGAAATTCGACATCAAAATGTCTAACTATACCCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCAAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476088" ref_strand="+" ref_description="SGN-E476088 [cSTB-43-E6]">
      <seq>cgctttctctctctaaaaatcttttatgtttctcactctttgagaaactcaaaaatagtcaccatatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctgttaatatatttgaaatttgacatcaaaatgtctaactatactccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgccaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagtgctgatcttgttaactaccttctcatgaccgagaacattgacactataatgcactttgctgctcagacccatgtcgacaactcctttggtaatagctttgagttcaccaagaacaacatttatggcacacacgtgctattagaggcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17460" stop="15561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17160" g_stop="17054" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.869" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="15861" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="506" r_length="403" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E476088" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17160" e_stop="17054"/>
          <exon e_start="16260" e_stop="15861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTTCTCTCTCTAAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGC</genome_strand>
        <mrna_strand>CGCTTTCTCTCTCTAAA-AATCTTTTATGTTTCTCACTCT-T-TGAGAAACTCAAAAAT-AGTCACCATATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTGTTAATATATTTGAAATTTGACATCAAAATGTCTAACTATACTCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATGACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445437" ref_strand="+" ref_description="SGN-E445437 [cSTA-45-D17]">
      <seq>taaaaatcttttatgtttctcactctttgagaaactcaaaaatcgtctccatatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctctgaatatatttgaaattcgacatcaaaatgtctaactataccccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgcaaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagtgctgatcttgttaactaccttctcatcaccgagaacattgacactataatgcactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17445" stop="15653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17146" g_stop="17054" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.869" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="15953" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="401" r_length="311" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E445437" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17146" e_stop="17054"/>
          <exon e_start="16260" e_stop="15953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTG</genome_strand>
        <mrna_strand>TAAAAATCTTTTATGTTTCTCACTCT-T-TGAGAAACTCAAAAATC-GTCTCCATATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTCTGAATATATTTGAAATTCGACATCAAAATGTCTAACTATACCCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCAAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479662" ref_strand="+" ref_description="SGN-E479662 [cSTD-10-J14]">
      <seq>gatgatttgatttttgcatgagagagggtagttgcgtgtataaatacacaaacaagaacatacttgactctcatcaatacacgctttctctctctaaaaatcttttatgtttctcactctttgagaaactcaaaaatcgtctccatatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctctgaatatatttgaaattcgacatcaaaatgtctaactataccccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgcaaaccgccttgttcggagttaccctgagtacaatattgtggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtttgttaagggagacattggcagggctgatcttgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17538" stop="15698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17240" g_stop="17054" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.869" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="15998" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="450" r_length="266" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E479662" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17240" e_stop="17054"/>
          <exon e_start="16260" e_stop="15998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATTTT-TTTTTGCATGAGAGAGGGTTTTTGCGGGTATAAATACACAAACAACAAGATACTTGACTCTCATCAATACACGCTTTCTCTCTCTAAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTA</genome_strand>
        <mrna_strand>GATGATTTGATTTTTGCATGAGAGAGGGTAGTTGCGTGTATAAATACACAAACAAGAACATACTTGACTCTCATCAATACACGCTTTCTCTCTCT-AAAAATCTTTTATGTTTCTCACTCT-T-TGAGAAACTCAAAAATC-GTCTCCATATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTCTGAATATATTTGAAATTCGACATCAAAATGTCTAACTATACCCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCAAACCGCCTTGTTCGGAGTTACCCTGAGTACAATATTGTGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTTTGTTAAGGGAGACATTGGCAGGGCTGATCTTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469107" ref_strand="+" ref_description="SGN-E469107 [cSTB-10-B3]">
      <seq>tgtttctcactctgtgagaaactcaaaaatagtcaccatatttttacttattgggttctgaaacaaaaaaaaaaacgggtttgagttgctgttaagctgttaatatatttgaaatttgacatcaaaatgtctaactatactccaaagaatatactcattactggggccgcagggtttattgcatctcatgttgccaaccgccttgttcggaggtaccctgagtacaatattgcggtccttgacaagcttgattattgctcaaacctgaaaaatctttccccatctcgatcttcccctaatttcaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="17429" stop="15733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17133" g_stop="17054" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.863"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.869" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16260" g_stop="16033" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="308" r_length="231" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E469107" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E469107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17133" e_stop="17054"/>
          <exon e_start="16260" e_stop="16033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGTAAGCGAATTTTAATGTGAATTTTGTTTTGTTTATATGATATTTTAGTTCTGGTTTACGATTCATGATACGGGTATTTTTTATTTTTTAAAAAAAGTTCATGATTTTAGCTAGATCTGTGTTTGGAATACTCATATGTATTGATTCATTGTGTTGGCATTGGAGCTTGTAATCCAGATCTATAACTGATAATGATAATGTTGGGTATTTTAGAGAATCATTTTGGATCTGATGATTTCTGTGTTGATAAAAAAAAATCATTTTTTTGTGTTTTTTTTTTTGGAATTATGAGATCATATTGTCTACTTGATTAGTTTGTTATTTGTTGCATAATTGTTTTGTTTGATATTTTTTGCTGGTTTATGTGATATTTCTATAGCTTATTTCATCTCTGATCTGGGGAAATTATGTATTTGTTCATGCATAATTACTACCATTAGTGTTGTCAATTCTTTGATGTGCATGGAGTTTGTCTTTGGTTGATGTTTTTGTTGGCGAATGTTTTCATGAAGTGGTGTAGTTGATCTTTAGTGTTACGATGTTGTTTTGATTATTAATCTAAATAAAGAATTCGTTTTTATGTATACTGCTCGTACTCTCTAAAAATGTTGCTGCATTTGTGTCGGATTGTCCAATAACACACTACTTTGGAAAATCCAACACACCCGTCGACATTTTCTAAGAGTCCAAGCAATATAGTTTTTCTTTTTTTTTGCCTTTGTGCTTTTCTTAAGCTTTTTTTGACAGTTGTTGATTAGATCAAGTTATTTTTTTTTATAATTTCAGGGTTTAAGTTGCTGTTAAGCTCTGAATATATTTG--A-TCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTT</genome_strand>
        <mrna_strand>TGTTTCTCA--CTCTGTGAGAAACTCAAAAAT-AGTCACCATATTTTTACTTATTGGGTTCTGAAACAAAAAAAAAAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGAGTTGCTGTTAAGCTGTTAATATATTTGAAATTTGACATCAAAATGTCTAACTATACTCCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGGTACCCTGAGTACAATATTGCGGTCCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTCAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310865" ref_strand="+" ref_description="SGN-E310865 [cLEZ-15-J19]">
      <seq>ctattctaaaatttgatggtttctttggcttcgtctcaagttcttgcaatctgtaaagatgcagctggaatcgccgggaatatctttgcttttggattgtttttgtctccaatgcctacattcatgagaataatgaggaatcaatcaactgaacagttctcagggttgccgtacatctatggtctattgaactgcttaatttgtgcctggtatggcacccctctcgtatctcccgacaatttgttggttacatcagttaattcacttggtgctgtttttcaacttgcctacattgtactttacgtaacgtatacagagaaagagaaaaagttcaggatgtttggatggatactcacagtctttggcctatttgttattattgtacttggaagcttgtttatacttgatctggaactccgacgcatcatcattggctccctgagttgtgcttccttgatatcaatgtttgcctccccactgttaattattaatctggtgatcaggaccaggagtgttgaattcatgccgttttgtctgtccctctccaccttcctaatgagtgcctctttccttttgtatggaattttcagttctgatccctttatatatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="23715" stop="26811"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24015" g_stop="24090" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24091" i_stop="25665" i_length="1575">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25666" g_stop="25702" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="113" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25703" i_stop="25824" i_length="122">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25825" g_stop="26041" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="330" r_length="217" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26042" i_stop="26140" i_length="99">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26141" g_stop="26299" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="489" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26300" i_stop="26389" i_length="90">
            <donor d_prob="0.832" d_score="1.00"/>
            <acceptor a_prob="0.804" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26390" g_stop="26511" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="611" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E310865" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24015" e_stop="24090"/>
          <exon e_start="25666" e_stop="25702"/>
          <exon e_start="25825" e_stop="26041"/>
          <exon e_start="26141" e_stop="26299"/>
          <exon e_start="26390" e_stop="26511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTCTAAAATTTGATGGTTTCTTTGGCTTCGTCTCAAGTTCTTGCAATCTGTAAAGATGCAGCTGGAATCGCCGGTAAGACTTCATTTTTTTTTTCTATGTAATTATTACTAATACTTTTTTAGTCGTAAAAATTTGATCTTGCTGATTTCTGCAAACTGTTTCTTGTTTTTTTGTACAAAATTTGGAAATAGTTTTGAATTCTATATAGAATCATTGCAACTCTTTTTGGCAAAAATTAAAGGGATGATCTTTATTTTGTGGAAGATTATTCAAGCTAAAGCTAAGTGAACAGATTTTTTTGCTAGAAGAATTGGGGAAGTTGTTGAAGTTTAGGATGTTGTGAGAAAAAAAAAATTGTGGGGGTTGAGGGATAGAAAATTAGTTTGTTTTGAAGTCAGCTAAAGCTAGTCGCACGGGGCTTGTCTAGTGCGGCATGTGGGACTTTTGTCATTCTTTGACGGGACAATTTTGATTTTGGGGATCCCAACATTGGATGAGACGGGCTCTGCTCTGATACCATGAGGAGGATTGTCCAAGCCTTATAACGAGTCTACCCATCTCATTAACCACCAATGTGGGACTTTTGTCATTCTTTAACAGTTTATGGACTATTGCGGTGGAGTGGGGTTTATCTTGTGCTCACGTGATGGTAAACCGCAAAAAGAAGTAGGCTGTTAGGCAGAATCTGAGATGTAGGGTAGGTTTTACATTATCTGTACTACAACAACAACATTACCCAATATAGTTTCATTGGTGGGGTCTGGGGAGGATGTGGTGTACGTAGACCTTACTCCTATCTCTATCTTTGTGGGTAGAGAGATTGTTTCTCATAGACCCTCGGCTCTAGAAGTATGGGTTTGATGAACCTATAGCCAAAAGGCTATATCTGCCTCAAGCAGTCATCTTTGGATTTAAACTTACCTTTTATTCTATTTCTAATCAGTAACAGAACGGCTGCACCAAAAGATGTGTTTCAACTTTAAAACGGATTGATCATCCTCGTGCTAGTGAATGGCATGAAAAAATGTCTACCTGTAGTTTCCGTTGCATTCATATATTATTGATTGCTTGTACTGTGTACTGTTTAGCAACCTCTTAATTTCTTTTCCCATATATGAGCTTAAGCCTGTAAATTTGAACCCGATTTACTACTAGCTTTTGCCGAAAGTACTTTCAAAAGTACAAGTAAAAAATATGTGTGTGTGTGGGTATAACTTGCACACATAAATTATAGTGATTCGCACGGTAAAGAAGTAATTTTTTGGGTGTATTTTACCAAACTAACTTCTGATGGAAGTATAAACATTTTATTGAGAGTGGGCAAATGGTTGGTTCGATAGGCCTAAGCAAGTTTAGTAGCTCTCTTTGAGCTAAAATTTACTTCTAGATTGAACTCTTGATGCAGTGTTTTTCATGTTAAAATTAAAGCACTTTTTGGTCAATCATATAGGAGGCATATTATTCCTGGCCGTGAAATGAATTAGATTGTAGAGGGAAAATGAGATAATACCCTTTACTTCTCAGCTTACTCGCTATTGTCTTTCCAACAATTTTTGAATTTTTTCTTAAATGAGGTTTGCAAACTTATAGTTGAGACTTTATCACGACTCGAGGGAAAACGTTAACCATCTTAGCTCCTTGTTGCAGGGAATATCTTTGCTTTTGGATTGTTTTTGTCTCCAATGTGAGTCTTAAGCTTTTCATCCTTCATTTTGATTTTCGCACTTCCATAATGTAGAAAACAAAGTTCACCTTGACCAATTACTTCTTTGTCCACAATCCAGTATCATTTATCTTTATTTTCAGGCCTACATTCATGAGAATAATGAGGAATCAATCAACTGAACAGTTCTCAGGGTTGCCGTACATCTATGGTCTATTGAACTGCTTAATTTGTGCCTGGTATGGCACCCCTCTCGTATCTCCCGACAATTTGTTGGTTACATCAGTTAATTCAGTTGGTGCTGTTTTTCAACTTGCCTACATTGTACTTTACGTAACGTATACAGAGAAAGAGAAAAAGGTTAATACTCTTCTGTTGTATTATTTAATTAATAAAGCAGTTTCACACTCATTCATAGCGTAATCTGTTAATCCGTATGCCCATCAATGTTGTTTGTAGTTCAGGATGTTTGGATGGATACTCACAGTCTTTGGCCTATTTGTTATTATTGTACTTGGAAGCTTGTTTATACTTGATCTGGAACTCCGACGCATCATCATTGGCTCCCTGAGTTGTGCTTCCTTGATATCAATGTTTGCCTCCCCACTGTTAATTATTGTATGTCTAACCGTTGACATTCAGAATTTTCTATCAAGTTCTTGTTCTCTAACGTTTTTCCGCGGATTCACTGACTAACTTGTATTACAGAATCTGGTGATCAGGACCAGGAGTGTTGAATTCATGCCGTTTTGTCTGTCCCTCTCCACCTTCCTAATGAGTGCCTCTTTCCTTTTGTATGGAATTTTCAGTTCTGATCCCTTTATATATGT</genome_strand>
        <mrna_strand>CTATTCTAAAATTTGATGGTTTCTTTGGCTTCGTCTCAAGTTCTTGCAATCTGTAAAGATGCAGCTGGAATCGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATATCTTTGCTTTTGGATTGTTTTTGTCTCCAAT..........................................................................................................................GCCTACATTCATGAGAATAATGAGGAATCAATCAACTGAACAGTTCTCAGGGTTGCCGTACATCTATGGTCTATTGAACTGCTTAATTTGTGCCTGGTATGGCACCCCTCTCGTATCTCCCGACAATTTGTTGGTTACATCAGTTAATTCACTTGGTGCTGTTTTTCAACTTGCCTACATTGTACTTTACGTAACGTATACAGAGAAAGAGAAAAAG...................................................................................................TTCAGGATGTTTGGATGGATACTCACAGTCTTTGGCCTATTTGTTATTATTGTACTTGGAAGCTTGTTTATACTTGATCTGGAACTCCGACGCATCATCATTGGCTCCCTGAGTTGTGCTTCCTTGATATCAATGTTTGCCTCCCCACTGTTAATTATT..........................................................................................AATCTGGTGATCAGGACCAGGAGTGTTGAATTCATGCCGTTTTGTCTGTCCCTCTCCACCTTCCTAATGAGTGCCTCTTTCCTTTTGTATGGAATTTTCAGTTCTGATCCCTTTATATATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289147" ref_strand="+" ref_description="SGN-E289147 [cLES-18-J21]">
      <seq>aaaaaggatgtttggatggatactcacagtctttggcctatttgttattattgtacttggaagcttgtttatacttgatctggaactccgacgcatcatcattggctccctgagttgtgcttccttgatatcaatgtttgcctccccactgttaattattaatctggtgatcaggaccaggagtgttgaattcatgccgttttgtctgtccctctccaccttcctaatgagtgcctctttccttttgtatggaattttcagttctgatccctttatatatgtaccaaatggcattggaacacttttaggagttacacaattgcttttatttgcacattacagaaattcttcaagagaggactctgccgaaggccttatagtatcttattcatgaactagaattctaagaaagtagtgtcttttgtgcatgaaaaaacacccaggaggaaaggtgatcgtaaaatctcacttgattgcatggagaaatggtgagaattccaagctcaaggtgatggcagttccctagtcattgaactcgttcagctatacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="25844" stop="27280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26036" g_stop="26041" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26042" i_stop="26145" i_length="104">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26146" g_stop="26299" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="160" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26300" i_stop="26389" i_length="90">
            <donor d_prob="0.832" d_score="1.00"/>
            <acceptor a_prob="0.804" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26390" g_stop="26509" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="280" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26510" i_stop="26599" i_length="90">
            <donor d_prob="0.440" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26600" g_stop="26770" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="451" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26771" i_stop="26880" i_length="110">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26881" g_stop="26980" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="551" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E289147" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26036" e_stop="26041"/>
          <exon e_start="26146" e_stop="26299"/>
          <exon e_start="26390" e_stop="26509"/>
          <exon e_start="26600" e_stop="26770"/>
          <exon e_start="26881" e_stop="26980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGGTTAATACTCTTCTGTTGTATTATTTAATTAATAAAGCAGTTTCACACTCATTCATAGCGTAATCTGTTAATCCGTATGCCCATCAATGTTGTTTGTAGTTCAGGATGTTTGGATGGATACTCACAGTCTTTGGCCTATTTGTTATTATTGTACTTGGAAGCTTGTTTATACTTGATCTGGAACTCCGACGCATCATCATTGGCTCCCTGAGTTGTGCTTCCTTGATATCAATGTTTGCCTCCCCACTGTTAATTATTGTATGTCTAACCGTTGACATTCAGAATTTTCTATCAAGTTCTTGTTCTCTAACGTTTTTCCGCGGATTCACTGACTAACTTGTATTACAGAATCTGGTGATCAGGACCAGGAGTGTTGAATTCATGCCGTTTTGTCTGTCCCTCTCCACCTTCCTAATGAGTGCCTCTTTCCTTTTGTATGGAATTTTCAGTTCTGATCCCTTTATATATGTGAGTTTTCTTTCTCTCGCTTGGGAAATTTCCAATTTTTTCTTTTGTTCCTCTCGCCCGACTCACGAAGGATTTCTACTTAAATTTCAGGTACCAAATGGCATTGGAACACTTTTAGGAGTTACACAATTGCTTTTATTTGCACATTACAGAAATTCTTCAAGAGAGGACTCTGCCGAAGGCCTTATAGTATCTTATTCATGAACTAGAATTCTAAGAAAGTAGTGTCTTTTGTGCATGAAAAAACACCCAGGAGGAAAGGTAAATTCTCGTTACGTGTGCATTTTGTGAACATATATCTTTCATTCTTTCTCGAGCTGTTAAATAACAAATATACCTTTTAATTGTACATCTCCCTTTATTTGTCCTAGGTGATCGTAAAATCTCACTTGATTGCATGGAGAAATGGTGAGAATTCCAAGCTCAAGGTGATGGCAGTTCCCTAGTCATTGAACTCGTTCAGCTATACCT</genome_strand>
        <mrna_strand>AAAAAG........................................................................................................GATGTTTGGATGGATACTCACAGTCTTTGGCCTATTTGTTATTATTGTACTTGGAAGCTTGTTTATACTTGATCTGGAACTCCGACGCATCATCATTGGCTCCCTGAGTTGTGCTTCCTTGATATCAATGTTTGCCTCCCCACTGTTAATTATT..........................................................................................AATCTGGTGATCAGGACCAGGAGTGTTGAATTCATGCCGTTTTGTCTGTCCCTCTCCACCTTCCTAATGAGTGCCTCTTTCCTTTTGTATGGAATTTTCAGTTCTGATCCCTTTATATAT..........................................................................................GTACCAAATGGCATTGGAACACTTTTAGGAGTTACACAATTGCTTTTATTTGCACATTACAGAAATTCTTCAAGAGAGGACTCTGCCGAAGGCCTTATAGTATCTTATTCATGAACTAGAATTCTAAGAAAGTAGTGTCTTTTGTGCATGAAAAAACACCCAGGAGGAAAG..............................................................................................................GTGATCGTAAAATCTCACTTGATTGCATGGAGAAATGGTGAGAATTCCAAGCTCAAGGTGATGGCAGTTCCCTAGTCATTGAACTCGTTCAGCTATACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478673" ref_strand="+" ref_description="SGN-E478673 [cSTD-6-D3]">
      <seq>ttttgtccttggaagcgcagcgttcattctgacatgactcaatacggtgcttttcacaattaacagtttacatcgccttcatcagatttgttcagctctttttagatatatttgatcatttcataaccaagacaaaataaaacaaagaagatggctggtcgaaatcgcgggcctccacttccaatgaaaggtggtcctcatggtggacttcctccgcaaatgcatgagtcccagtttgctaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagcggttggctgcaactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagttttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatattaaggagtttactgctgccagacaagagcttactgttgagtatcaaagaatgacacaggatttgagtagaatgactgcagatttacagcaggctccagcaataaaagctgaaattgaaggtctaaaaacagagctgcagcgagcaagggcagctattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28808" stop="30708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29108" g_stop="29213" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30407" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="752" r_length="647" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78">
            <donor d_prob="0.900" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30486" g_stop="30496" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="753" r_stop="763" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E478673" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29108" e_stop="29213"/>
          <exon e_start="29761" e_stop="30407"/>
          <exon e_start="30486" e_stop="30496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGTCCTTGGAAGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAGGTATTCTTTTCCCCAGAGTTCTGCTCTCCGTGGAACATTTTCAAATTGATAATTTTTTACTGTACTCTTGGTTTACAGGGCAGCTATTG</genome_strand>
        <mrna_strand>TTTTGTCCTTGGAAGCGCAGCGTTCATTCTGACATGACTCAATACGGTGCTTTTCACAATTAACAGTTT-ACATCGCCTTCATCAGATTTGTTCAGCTCTTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAAATAAAACAAAGAAGATGGCTGGTCGAAATCGCGGGCCTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCAAATGCATGAGTCCCAGTTTGCTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGTTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGAGCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATAAAAGCTGAAATTGAAGGTCTAAAAACAGAGCTGCAGCGAGCAAG..............................................................................GGCAGCTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746392" ref_strand="+" ref_description="SGN-E746392 [GI|47105570]">
      <seq>gaagcgcagcgttcattctgctatggctgaatacggtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcactatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatattaaggagtttactgctgccagacaagatcttactgttgagtatcaaagaatgacacaggatttgagtagaatgactgcagatttacagcaggctccagcaattaaagctgaaagtgaaggtctaaaacaagagctgcagcgagcaagggcagctattgagaatgagaagaaaggatacgcagaaaactatgaatatggtcaggttatggagaaaaaattgctagctatggctcgagaacttgaaaaacttcgagctgaggttgctaatgcagaaaaaagagcccgagcagcagcagctgttgcgaatccaggtgcagggtacaatgcaaattatgggaatcctgaatctggttatccagggaattattatcctgctaattacggaatgaatcctatgaaccctgctcatcctgtgcagggtggtgctgaaggctattctcagtatggacatgggcctggtgcttggggtggttatgatgtgcagcgagctcaaggacccagataaactagttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgacgacacaagcatgaaatttttgggcagaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccaaattagttatcctaccttgttggcaatcaaaaatagtgaaaatttgattattaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28819" stop="37281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29119" g_stop="29213" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30407" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="742" r_length="647" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30486" g_stop="30649" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="906" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31263" g_stop="31363" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="907" r_stop="1007" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150">
            <donor d_prob="0.795" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31514" g_stop="31653" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1008" r_stop="1147" r_length="140" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1148" r_stop="1201" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36710" g_stop="36987" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1202" r_stop="1479" r_length="278" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E746392" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29119" e_stop="29213"/>
          <exon e_start="29761" e_stop="30407"/>
          <exon e_start="30486" e_stop="30649"/>
          <exon e_start="31263" e_stop="31363"/>
          <exon e_start="31514" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="36987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAGGTATTCTTTTCCCCAGAGTTCTGCTCTCCGTGGAACATTTTCAAATTGATAATTTTTTACTGTACTCTTGGTTTACAGGGCAGCTATTGAGAATGAGAAGAAAGGATACGCAGAAAACTATGAATATGGTCAGGTTATGGAGAAAAAATTGCTAGCTATGGCTCGAGAACTTGAAAAACTTCGAGCTGAGGTTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAGGTACTTTCCTTATCCAAGTTCAGAAACTGTAAAATGCAGATATGAATAAGCACATTGAAAGATCCATCTTCTGATAAAGACAAATTTTCCTTGCTGTTGTGTTTCTCAGCTGAATTGTCTTTGTTTGATTGAGCACTGTTAAGCATGATTGAATAGTGACTTTGTTTTAATGTATTAAGCTGCTATATGGTTCATGCAGTTACATGGTTGTCTATTTGATTTATTGCTTCATATCAGAATTCAGAGTTTCTCTAATAATATTTACCTCAAGTTGATAGTAGAATTTATCAAATTTACCATTGGGTTTGATTCCTTCACAAGCTTCTTTCAAGTGTATTGAATTTGCTCTATATAATACTGTTTATCTCCTCTTTTATTAAATAATAAATAACAAAAAACGGGTTTGTAATAGTTTATTGGAGGTGCAAATCCCTGACAAGCTCAGTTGGATATGATTGCTTCAATTGGTGCGTTGTTTAATTTTTTGTTTGTATATAGACAGAAAGAGACGCATGTAATCTTTCGCAGCTGCTGCTTTGAAATTTCTCATACTTATTGGACATAGATTGTTAGTACTGTACCAGTTTCATGAAGTTCATCTTTACCTACACAGGTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCTGTAAGTAATTCTGTTGTGGTTTTGGCATTTCATGAGATTACAAAGTGAGCAGAAGGACAGCAGTATTTTGCTCTTTTTCATCTAGATGAAATGTGACTTCTTTTCCTTAGTATTTTAATGTCTAACTTTAGTTGTTCTTTTATATTTTAGGTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTA</genome_strand>
        <mrna_strand>GAAGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCACTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAG..............................................................................GGCAGCTATTGAGAATGAGAAGAAAGGATACGCAGAAAACTATGAATATGGTCAGGTTATGGAGAAAAAATTGCTAGCTATGGCTCGAGAACTTGAAAAACTTCGAGCTGAGGTTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCT......................................................................................................................................................GTGCAGGGTGGTGCTGAAGGCTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATTAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275005" ref_strand="+" ref_description="SGN-E275005 [cLEN-16-M22]">
      <seq>agcgcagcgttcattctgctatggctgaatacggtgctggtcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattatttgataaccagaggtttgctgctactcatgtagcactgaaacaagaacgagaagctgctcaatacgaacttcagcgaacctgatcatttatgccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28821" stop="30436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29121" g_stop="29213" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30136" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="471" r_length="378" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E275005" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29121" e_stop="29213"/>
          <exon e_start="29761" e_stop="30136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAA-CTGATCA-TTATGCCC</genome_strand>
        <mrna_strand>AGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTGGTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTATTTGATAACCAGAGGTTTGCTGCTACTCATGTAGCACTGAAACAAGAACGAGAAGCTGCTCAATACGAACTTCAGCGAACCTGATCATTTATGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437342" ref_strand="+" ref_description="SGN-E437342 [cSTA-3-O18]">
      <seq>gttttttctgccatgactcaatacggagcttttcagagttaacagtttacatcgccttcatcagatttgttctctttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggctggtcgaaatcgcgggcgtccacttccaatgaaaggtggtcctcatggtggacttcctccgcaaatgcatgagtcccagtttggtaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagcggttggctgcaactcatgtagcactgaaacaagaagttgaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28829" stop="30522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29129" g_stop="29213" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.847"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30222" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="543" r_length="462" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E437342" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29129" e_stop="29213"/>
          <exon e_start="29761" e_stop="30222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGAT</genome_strand>
        <mrna_strand>GTTTTTTCTGCCATGACTCAATACGGAGCTTTTCAGAGTTAACAGTTT-ACATCGCCTTCATCAGATTTGTT---CTCTTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCTGGTCGAAATCGCGGGCGTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCAAATGCATGAGTCCCAGTTTGGTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCAACTCATGTAGCACTGAAACAAGAAGTTGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437689" ref_strand="+" ref_description="SGN-E437689 [cSTA-4-N17]">
      <seq>gttcattctgccatgactcaatacggagcttttcacaattaacagtttacatcgccttcatcagatttgttctctttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggctggtcgaaatcgcgggcgtccacttccaatgaaaggtggtcctcatggtggacttcctccgcaaatgcatgagtcccagtttggtaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28829" stop="30327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29129" g_stop="29213" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.894"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30027" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="348" r_length="267" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E437689" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29129" e_stop="29213"/>
          <exon e_start="29761" e_stop="30027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAG</genome_strand>
        <mrna_strand>GTTCATTCTGCCATGACTCAATACGGAGCTTTTCACAATTAACAGTTT-ACATCGCCTTCATCAGATTTGTT---CTCTTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCTGGTCGAAATCGCGGGCGTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCAAATGCATGAGTCCCAGTTTGGTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567287" ref_strand="+" ref_description="SGN-E567287 [11388]">
      <seq>gtcattctgacatgactcaatacggtgcttctcacaattaacagtttacatcgccgtgcatcagatttgttcacgctcttttcagatatatatgatcatttcataagccaagacaaaataaaacacagaagatggctggtcgaaatcgagggcctccacttccaatgaaaggtggtcctcatggtggacttcctccggcaaatgcatgagtcccagtttgctaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagttgtggaatgggctccagaccaatgcctccacagcctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagcggttggctgccactcatgtagcactgaaacaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28831" stop="30390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29130" g_stop="29213" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.833"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.83"/>
            <acceptor a_prob="0.993" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30090" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="418" r_length="333" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E567287" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E567287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29130" e_stop="29213"/>
          <exon e_start="29761" e_stop="30090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCC-TTCATCAGATTTGTTCA-GCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAA-CCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCC-ACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTT-TGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAA</genome_strand>
        <mrna_strand>GTCATTCTGACATGACTCAATACGGTGCTTCTCACAATTAACAGTTT-ACATCGCCGTGCATCAGATTTGTTCACGCTCTTTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATATGATCATTTCATAAGCCAAGACAAAATAAAACACAGAAGATGGCTGGTCGAAATCGAGGGCCTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGGCAAATGCATGAGTCCCAGTTTGCTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTGTGGAATGGGCTCCAGACCAATGCCTCCACAGCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCCACTCATGTAGCACTGAAACAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207576" ref_strand="+" ref_description="SGN-E207576 [cLEC-32-I3]">
      <seq>tcattctgctatggctgaatacggtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28831" stop="30289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29131" g_stop="29213" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="29989" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="312" r_length="229" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E207576" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29131" e_stop="29213"/>
          <exon e_start="29761" e_stop="29989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTG</genome_strand>
        <mrna_strand>TCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448952" ref_strand="+" ref_description="SGN-E448952 [cSTS-4-P2]">
      <seq>ctgacatgactcaatacggtgcttttcacaattaacagtttacatcgccttcatcagatttgttcagctctttttagatatatttgatcatttcataaccaagacaaaataaaacaaagaagatggctggtcgaaatcgcgggcctccacttccaatgaaaggtggtcctcatggtggacttcctccgcaaatgcatgagtcccagtttgctaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagcggttggctgcaactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagtnntatgagaagtctgctaaagttgaaatggatctnncagtagctgatggtatgaggtcagagcttatgcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28836" stop="30547"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29136" g_stop="29213" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30247" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="564" r_length="487" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E448952" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29136" e_stop="29213"/>
          <exon e_start="29761" e_stop="30247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAG</genome_strand>
        <mrna_strand>CTGACATGACTCAATACGGTGCTTTTCACAATTAACAGTTT-ACATCGCCTTCATCAGATTTGTTCAGCTCTTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAAATAAAACAAAGAAGATGGCTGGTCGAAATCGCGGGCCTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCAAATGCATGAGTCCCAGTTTGCTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGTNNTATGAGAAGTCTGCTAAAGTTGAAATGGATCTNNCAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479090" ref_strand="+" ref_description="SGN-E479090 [cSTD-8-D17]">
      <seq>ctgacatgactcaatacggtgcttttcacaattaacagtttacatcgccttcatcagatttgttcagctctttttagatatatttgatcatttcataaccaagacaaaataaaacaaagaagatggctggtcgaaatcgcgggcctccacttccaatgaaaggtggtcctcatggtggacttcctccgcaaatgcatgagtcccagtttgctaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagcggttggctgcaactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagttttatgagaagtctgctaagttggaaatggatctccaagtagctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28836" stop="30523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29136" g_stop="29213" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30223" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="540" r_length="463" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E479090" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29136" e_stop="29213"/>
          <exon e_start="29761" e_stop="30223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATG</genome_strand>
        <mrna_strand>CTGACATGACTCAATACGGTGCTTTTCACAATTAACAGTTT-ACATCGCCTTCATCAGATTTGTTCAGCTCTTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAAATAAAACAAAGAAGATGGCTGGTCGAAATCGCGGGCCTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCAAATGCATGAGTCCCAGTTTGCTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGTTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328327" ref_strand="+" ref_description="SGN-E328327 [cTOC-21-G5]">
      <seq>tgctatggctgaatacggtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatattaaggagtttactgctgccagacaagatcttactgttgagtatcaaagaatgacacaggatttgagtagaatgactgcagatttacagcaggctccagcaattnaagctngaaagtgaggtctnaaacaagagctgcagcgagcaagggcagctattgagaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28837" stop="30708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29137" g_stop="29213" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30407" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="724" r_length="647" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78">
            <donor d_prob="0.900" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30486" g_stop="30502" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="741" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E328327" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29137" e_stop="29213"/>
          <exon e_start="29761" e_stop="30407"/>
          <exon e_start="30486" e_stop="30502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCT-GAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAGGTATTCTTTTCCCCAGAGTTCTGCTCTCCGTGGAACATTTTCAAATTGATAATTTTTTACTGTACTCTTGGTTTACAGGGCAGCTATTGAGAATG</genome_strand>
        <mrna_strand>TGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTNAAGCTNGAAAGTG-AGGTCTNAAACAAGAGCTGCAGCGAGCAAG..............................................................................GGCAGCTATTGAGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327676" ref_strand="+" ref_description="SGN-E327676 [cTOC-20-P20]">
      <seq>tgctatggctgaatacggtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatattaaggagtttactgctgccagacaagatcttactgttgagtatcaaagaatgacacaggatttgagtagaatgactgcagatttacagcaggctccagcaattaaagctgaaagtgaaggtctaaaacaagagctgcagcgagcaagggcagctattgagaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28837" stop="30708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29137" g_stop="29213" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30407" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="724" r_length="647" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30486" g_stop="30502" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="741" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E327676" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29137" e_stop="29213"/>
          <exon e_start="29761" e_stop="30407"/>
          <exon e_start="30486" e_stop="30502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAGGTATTCTTTTCCCCAGAGTTCTGCTCTCCGTGGAACATTTTCAAATTGATAATTTTTTACTGTACTCTTGGTTTACAGGGCAGCTATTGAGAATG</genome_strand>
        <mrna_strand>TGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAG..............................................................................GGCAGCTATTGAGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366100" ref_strand="+" ref_description="SGN-E366100 [cLPT-15-A8]">
      <seq>tgctatggctgaatacagtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaaaaaagaagatggccggtcggaatcgcgggcctccacttccaatgaaaggtggtcctcatggtggacttcctccgccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgcaactcatgtagcactgaaacaagaagtagaagctgctcaatacgaccttcagcgaactgatcattatgcccgttcttcgcgtatggaaactgatgtgcaaatgagagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28837" stop="30474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29137" g_stop="29213" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30174" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="491" r_length="414" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E366100" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29137" e_stop="29213"/>
          <exon e_start="29761" e_stop="30174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAG</genome_strand>
        <mrna_strand>TGCTATGGCTGAATACAGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAAAAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGACCTTCAGCGAACTGATCATTATGCCCGTTCTTCGCGTATGGAAACTGATGTGCAAATGAGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E424329" ref_strand="+" ref_description="SGN-E424329 [STM-43-K24]">
      <seq>ccatgactcaatacggtgcttttcacaattaacagtttacatcgccttcttcagatttgttcagctctttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggctggtcgaaatcgcgggcgtccacttccaatgaaaggtggtcctcatggtggacttcctccgcaaatgcatgagtcccagtttggtaggggtcgcatgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagcggttggctgcaactcatgtagcactgaaacaagaagtagaagttgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28839" stop="30468"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29139" g_stop="29213" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30168" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="482" r_length="408" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E424329" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29139" e_stop="29213"/>
          <exon e_start="29761" e_stop="30168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATG</genome_strand>
        <mrna_strand>CCATGACTCAATACGGTGCTTTTCACAATTAACAGTTT-ACATCGCCTTCTTCAGATTTGTTCAGCTCTTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCTGGTCGAAATCGCGGGCGTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCAAATGCATGAGTCCCAGTTTGGTAGGGGTCGCATGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGTTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313720" ref_strand="+" ref_description="SGN-E313720 [cTOA-17-A18]">
      <seq>tggctgaatacggtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctcctagtagctgatggtatgaggtcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28842" stop="30535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29142" g_stop="29213" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30235" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="547" r_length="475" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E313720" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29142" e_stop="29213"/>
          <exon e_start="29761" e_stop="30235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAG</genome_strand>
        <mrna_strand>TGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCTAGTAGCTGATGGTATGAGGTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356469" ref_strand="+" ref_description="SGN-E356469 [cLHT-20-C20]">
      <seq>ttctgcttacggtgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatattagaccatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttccaatgaaaggtggtcctcatggtggacttcctccgccaatgcatgagccccagtttgctaggggtcgcttgccggtgcatcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagtggataaccagaggttagctgcaactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28845" stop="30434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29143" g_stop="29213" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30134" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="445" r_length="374" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E356469" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29143" e_stop="29213"/>
          <exon e_start="29761" e_stop="30134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGC</genome_strand>
        <mrna_strand>TTCTGCTTACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTAGACCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCAATGAAAGGTGGTCCTCATGGTGGACTTCCTCCGCCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCATCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTGGATAACCAGAGGTTAGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251346" ref_strand="+" ref_description="SGN-E251346 [cLEG-23-N10]">
      <seq>tgcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28855" stop="30560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29155" g_stop="29213" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30260" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="559" r_length="500" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E251346" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29155" e_stop="29213"/>
          <exon e_start="29761" e_stop="30260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATAT</genome_strand>
        <mrna_strand>TGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240315" ref_strand="+" ref_description="SGN-E240315 [cLED-25-I13]">
      <seq>gcttttcacaattaacagtttaacatcgccttcatcagatttgttcagctccttttagatatatttgatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="28856" stop="30417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29156" g_stop="29213" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29761" g_stop="30117" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="415" r_length="357" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E240315" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29156" e_stop="29213"/>
          <exon e_start="29761" e_stop="30117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAGGTATGTATCTCCTCATATTCTGGGTTTACTGTCTCTGTTTTCGTTTTATCTTGCTTCTAACTAGAATTTATTTCTTTTTCTGTGCGATTTGGCGTCTTCGGATGTATATATGTTTGTGTTTGAGCTTCGTTTTTCTTATGCGTGATAATCATATATCGTTGTGTGTTTCGTTTGAACTGAATTTGGGGGTTTAGGGTTTTTCAGGGATTTGTAATTTTGAGGCCCTTATTAGTTTCCACTGCTTTAGTGGCTTTAGGGTTAAGCGGCCATTGATTTGTTGTTTTTCATTTCCACCTTCGAAGTGCTCACTCACTTCATAAACGACTAGGTCACAGCTTTGGATGTCATCTGTGAAAAAAAAATTGATATTGCTTAGGGGTAGAAGTTTTTTTCCCCTTTATGCTATGTTGATGCTCTGTCCCTCACAATTGATTTTAGGTCAAGGGTTTGGGGTGGGATGGAAGTCATTTACTAACACACCCTTATTCCCTTATCCATCGTAGTTTTCATTAGTCACTGATATCAATTGGTGTTTTTTTTCTAACAGATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAG</genome_strand>
        <mrna_strand>GCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369724" ref_strand="+" ref_description="SGN-E369724 [TUS-25-G11]">
      <seq>gatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatattaaggagtttactgctgccagacaagatcttactgttgagtatcaaagaatgacacaggatttgagtagaatgactgcagatttacagcaggcttcagcaattaaagctgaaagtgaaggtctaaaacaagagctgcagcgagcaagggcagctattgagaatgagaagaaaggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="29469" stop="30814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29769" g_stop="30407" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30486" g_stop="30514" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="668" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E369724" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29769" e_stop="30407"/>
          <exon e_start="30486" e_stop="30514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAGGTATTCTTTTCCCCAGAGTTCTGCTCTCCGTGGAACATTTTCAAATTGATAATTTTTTACTGTACTCTTGGTTTACAGGGCAGCTATTGAGAATGAGAAGAAAGGAT</genome_strand>
        <mrna_strand>GATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTTCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAG..............................................................................GGCAGCTATTGAGAATGAGAAGAAAGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248908" ref_strand="+" ref_description="SGN-E248908 [cLEF-49-F13]">
      <seq>gatcatttcataaccaagacaagataaaacaaagaagatggccggtcggaatcgcgggcctccacttcctatgaaaggtggtcctcatggtggacttcctccaccaatgcatgagccccagtttgctaggggtcgcttgccggtgcctcatccagcaatgcttgaagaaatgagagaatcacagtttggaatgggctccagaccaatgcctccacaccctgctgttcttgaggaacacctggctagtcagcatgatgagattcaaggattattagttgataaccagaggttagctgctactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaaactgatgtgcaaatgagagagctttatgagaagtctgctaagttggaaatggatctccaagtagctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="29469" stop="30522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29769" g_stop="30222" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E248908" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29769" e_stop="30222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGAT</genome_strand>
        <mrna_strand>GATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479030" ref_strand="+" ref_description="SGN-E479030 [cSTD-8-C18]">
      <seq>aaaataaaacaaagaagctggctggtcgaaatcgcgggccctccaccttccaatgaaaggtggtcctcatggtggaccttcctccgcaaatgccatgagtcccagtttgctaggggtcgcatgcccggtgccctcatccagcaatgcttgaagaaatgagaagaatcacagtttggaatgggctccagaccaatgcctccacacccctgctgttcttgaggaacacctggctagtcagcatgatgagaattcaaggattattagttgataaccagcggttggctgcaactcatgtagcactgaaacaagaagtagaagctgctcaatacgaacttcagcgaactgatcattatgcccgttctttgcgtatggaacctgatgtgcaaatgagagagttttatgagaagtctgctaagttggaaatggatctccaagtagctgatggtatgaggtcagagcttatgcgagtgcgctcggatattaaggagtttactgctgccagacaagagcttactgttgagtatcaaagaatgacacaggatttgagtagaatgactgcagatttacagcangctccagcaataaaagctgaaattgaaggtctaaaacaagagctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="29489" stop="30698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29789" g_stop="30398" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="619" r_length="619" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E479030" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29789" e_stop="30398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGG-CCTCCA-CTTCCTATGAAAGGTGGTCCTCATGGTGGA-CTTCCTCCACCAATG-CATGAGCCCCAGTTTGCTAGGGGTCGCTTG-CCGGTG-CCTCATCCAGCAATGCTTGAAGAAATGAG-AGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACA-CCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAG-ATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCA</genome_strand>
        <mrna_strand>AAAATAAAACAAAGAAGCTGGCTGGTCGAAATCGCGGGCCCTCCACCTTCCAATGAAAGGTGGTCCTCATGGTGGACCTTCCTCCGCAAATGCCATGAGTCCCAGTTTGCTAGGGGTCGCATGCCCGGTGCCCTCATCCAGCAATGCTTGAAGAAATGAGAAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGAATTCAAGGATTATTAGTTGATAACCAGCGGTTGGCTGCAACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAACCTGATGTGCAAATGAGAGAGTTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGAGCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCANGCTCCAGCAATAAAAGCTGAAATTGAAGGTCTAAAACAAGAGCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369723" ref_strand="+" ref_description="SGN-E369723 [TUS-25-G11](-)">
      <seq>aattaaagctgaaagtaaaggtctaaaacaagagctgcagcgagcaagggcagctattgagaatgaaaagaaaggatacgcagaaaactatgaatatggtcagggtatggagaaaaaattgctagctatggctcaagaacttgaaaaacttcaagctgaggttgctaatgcagaaaaaagagcccaagcagcagcagctgttgcgaatccaggtgcagggtacaatgcaaattatgggaatcctgaatctggttatccagggaattattatcctgctaattacggaatgaatcctatgaaccctgctcatcctgtgcagggtggtgctgaaggttattctcagtatggacatgggcctggtgcttggggtggttatgatgtgcagcgagctcaaggacccagataaactagttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgacgacacaagcatgaaatttttggaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccaaattagttatcctaccttgttggcaatcaaaaatagtgaaaatttgattatcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="30060" stop="37281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30360" g_stop="30407" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30486" g_stop="30649" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="212" r_length="164" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31263" g_stop="31363" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="313" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150">
            <donor d_prob="0.795" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31514" g_stop="31653" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="453" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="507" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="35571" i_stop="36713" i_length="1143">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.400" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36714" g_stop="36983" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="777" r_length="270" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E369723" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30360" e_stop="30407"/>
          <exon e_start="30486" e_stop="30649"/>
          <exon e_start="31263" e_stop="31363"/>
          <exon e_start="31514" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36714" e_stop="36983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAGGTATTCTTTTCCCCAGAGTTCTGCTCTCCGTGGAACATTTTCAAATTGATAATTTTTTACTGTACTCTTGGTTTACAGGGCAGCTATTGAGAATGAGAAGAAAGGATACGCAGAAAACTATGAATATGGTCAGGTTATGGAGAAAAAATTGCTAGCTATGGCTCGAGAACTTGAAAAACTTCGAGCTGAGGTTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAGGTACTTTCCTTATCCAAGTTCAGAAACTGTAAAATGCAGATATGAATAAGCACATTGAAAGATCCATCTTCTGATAAAGACAAATTTTCCTTGCTGTTGTGTTTCTCAGCTGAATTGTCTTTGTTTGATTGAGCACTGTTAAGCATGATTGAATAGTGACTTTGTTTTAATGTATTAAGCTGCTATATGGTTCATGCAGTTACATGGTTGTCTATTTGATTTATTGCTTCATATCAGAATTCAGAGTTTCTCTAATAATATTTACCTCAAGTTGATAGTAGAATTTATCAAATTTACCATTGGGTTTGATTCCTTCACAAGCTTCTTTCAAGTGTATTGAATTTGCTCTATATAATACTGTTTATCTCCTCTTTTATTAAATAATAAATAACAAAAAACGGGTTTGTAATAGTTTATTGGAGGTGCAAATCCCTGACAAGCTCAGTTGGATATGATTGCTTCAATTGGTGCGTTGTTTAATTTTTTGTTTGTATATAGACAGAAAGAGACGCATGTAATCTTTCGCAGCTGCTGCTTTGAAATTTCTCATACTTATTGGACATAGATTGTTAGTACTGTACCAGTTTCATGAAGTTCATCTTTACCTACACAGGTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCTGTAAGTAATTCTGTTGTGGTTTTGGCATTTCATGAGATTACAAAGTGAGCAGAAGGACAGCAGTATTTTGCTCTTTTTCATCTAGATGAAATGTGACTTCTTTTCCTTAGTATTTTAATGTCTAACTTTAGTTGTTCTTTTATATTTTAGGTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATT</genome_strand>
        <mrna_strand>AATTAAAGCTGAAAGTAAAGGTCTAAAACAAGAGCTGCAGCGAGCAAG..............................................................................GGCAGCTATTGAGAATGAAAAGAAAGGATACGCAGAAAACTATGAATATGGTCAGGGTATGGAGAAAAAATTGCTAGCTATGGCTCAAGAACTTGAAAAACTTCAAGCTGAGGTTGCTAATGCAGAAAAAAGAGCCCAAGCAGCAGCAGCTGTTGCGAATCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCT......................................................................................................................................................GTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E605278" ref_strand="-" ref_description="SGN-E605278 [21195]">
      <seq>aacttgaaagaacttcgagctgaggcttgctaatgcagaaaaaagagcccgagcagcagcagctgtagggaatccaggtgcagggtacaatgcaaattatgggaatccggaatctggttatccagggaattattatcctgctaattacggaatgaatcctatgaaccctgctctatcctgtgcagggtgctgctgagaggttattctcaatatggacatgggcctggtgcttggggtggttatgatgggcagcgagctcaaggacccagataaactagttaatgtaggctgtcacatggtgttgtcgcctgctactttccggttttaaccaatgtctaaacgagatcatcgatgacacgagcatgaaattttcgggcagaatcccgcggctaaagtggtactctatattcagtctggcagggcaattgatttatctcagttagtattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtggattttccagcactacttgtttctgaacaaattgctgggaatatttatattttccttggtgaattgtgatgctaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="30275" stop="37192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30575" g_stop="30649" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31263" g_stop="31363" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="179" r_length="102" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150">
            <donor d_prob="0.795" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31514" g_stop="31653" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="321" r_length="142" r_score="0.921"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.985" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="375" r_length="54" r_score="0.870"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36710" g_stop="36868" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="537" r_length="162" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E605278" ref_strand="-">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E605278" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="30575" e_stop="30649"/>
          <exon e_start="31263" e_stop="31363"/>
          <exon e_start="31514" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="36868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTGAAA-AACTTCGAGCTGAGG-TTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAGGTACTTTCCTTATCCAAGTTCAGAAACTGTAAAATGCAGATATGAATAAGCACATTGAAAGATCCATCTTCTGATAAAGACAAATTTTCCTTGCTGTTGTGTTTCTCAGCTGAATTGTCTTTGTTTGATTGAGCACTGTTAAGCATGATTGAATAGTGACTTTGTTTTAATGTATTAAGCTGCTATATGGTTCATGCAGTTACATGGTTGTCTATTTGATTTATTGCTTCATATCAGAATTCAGAGTTTCTCTAATAATATTTACCTCAAGTTGATAGTAGAATTTATCAAATTTACCATTGGGTTTGATTCCTTCACAAGCTTCTTTCAAGTGTATTGAATTTGCTCTATATAATACTGTTTATCTCCTCTTTTATTAAATAATAAATAACAAAAAACGGGTTTGTAATAGTTTATTGGAGGTGCAAATCCCTGACAAGCTCAGTTGGATATGATTGCTTCAATTGGTGCGTTGTTTAATTTTTTGTTTGTATATAGACAGAAAGAGACGCATGTAATCTTTCGCAGCTGCTGCTTTGAAATTTCTCATACTTATTGGACATAGATTGTTAGTACTGTACCAGTTTCATGAAGTTCATCTTTACCTACACAGGTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTC-ATCCTGTAAGTAATTCTGTTGTGGTTTTGGCATTTCATGAGATTACAAAGTGAGCAGAAGGACAGCAGTATTTTGCTCTTTTTCATCTAGATGAAATGTGACTTCTTTTCCTTAGTATTTTAATGTCTAACTTTAGTTGTTCTTTTATATTTTAGGTGCAGGGTGGTGCTGA-AGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGT-GCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAAT-CCGCGGCTAAAGTGGTTACT-TATATTCAGTCTGGCAAGGCAATCGATTTATCTCAG-T--TATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTAT</genome_strand>
        <mrna_strand>AACTTGAAAGAACTTCGAGCTGAGGCTTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTAGGGAATCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGGTACAATGCAAATTATGGGAATCCGGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCTATCCT......................................................................................................................................................GTGCAGGGTGCTGCTGAGAGGTTATTCTCAATATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGGGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACATGGTGTTGTCGCCTGCTACTTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAACCAATGTCTAAACGAGATCATCGATGACACGAGCATGAAATTTTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCCGCGGCTAAAGTGG-TACTCTATATTCAGTCTGGCAGGGCAATTGATTTATCTCAGTTAGTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTGGATTTTCCAGCACTACTTG-TTTCTGAACAAATTGCTGGGAATATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E415616" ref_strand="-" ref_description="SGN-E415616 [STM-21-L17]">
      <seq>aaaaagagcccgagcagcagcagctgttgggaatccaggtgcagggtacaatgcaaattatgggaatccggaatctggttatccagggaattattatcttgctaattacggaatgaatcctatgaaccgtgctcatcctgtgcaaggtggtgctgaaggttattctcaatatggacatgggtctggtgcttggggtggttatgatgtgcagcgagctcaaggacccagataaactagttaatgtaggctgtcacatggtgttgtgcctgctactttccggttataaccaatgtttaaacgagttcatcaatgactcgagcatgaaattttccggcagaatcccgcggctaaagtggtacttatattcagtctggcagggcaattgatttatctcagttagtattttgcaacttgtgctatcaagtgtagcatttaacagcaatgtggattttccagcactacttgtttatgaacaaattgatgggaatatttatatttccttgtgaattgtgagatatttttgtggctcccttttccccaaaaataaaaatgctacctgttggcaatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="30312" stop="37257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30612" g_stop="30649" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31263" g_stop="31363" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="139" r_length="101" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150">
            <donor d_prob="0.795" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31514" g_stop="31653" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="279" r_length="140" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.985" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="333" r_length="54" r_score="0.833"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="0.82"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36710" g_stop="36911" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="537" r_length="204" r_score="0.861"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="540" polyA_stop="550"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E415616" ref_strand="-">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415616" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="30612" e_stop="30649"/>
          <exon e_start="31263" e_stop="31363"/>
          <exon e_start="31514" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="36911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAGGTACTTTCCTTATCCAAGTTCAGAAACTGTAAAATGCAGATATGAATAAGCACATTGAAAGATCCATCTTCTGATAAAGACAAATTTTCCTTGCTGTTGTGTTTCTCAGCTGAATTGTCTTTGTTTGATTGAGCACTGTTAAGCATGATTGAATAGTGACTTTGTTTTAATGTATTAAGCTGCTATATGGTTCATGCAGTTACATGGTTGTCTATTTGATTTATTGCTTCATATCAGAATTCAGAGTTTCTCTAATAATATTTACCTCAAGTTGATAGTAGAATTTATCAAATTTACCATTGGGTTTGATTCCTTCACAAGCTTCTTTCAAGTGTATTGAATTTGCTCTATATAATACTGTTTATCTCCTCTTTTATTAAATAATAAATAACAAAAAACGGGTTTGTAATAGTTTATTGGAGGTGCAAATCCCTGACAAGCTCAGTTGGATATGATTGCTTCAATTGGTGCGTTGTTTAATTTTTTGTTTGTATATAGACAGAAAGAGACGCATGTAATCTTTCGCAGCTGCTGCTTTGAAATTTCTCATACTTATTGGACATAGATTGTTAGTACTGTACCAGTTTCATGAAGTTCATCTTTACCTACACAGGTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCTGTAAGTAATTCTGTTGTGGTTTTGGCATTTCATGAGATTACAAAGTGAGCAGAAGGACAGCAGTATTTTGCTCTTTTTCATCTAGATGAAATGTGACTTCTTTTCCTTAGTATTTTAATGTCTAACTTTAGTTGTTCTTTTATATTTTAGGTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAAT-CCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAG-T--TATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCA</genome_strand>
        <mrna_strand>AAAAAGAGCCCGAGCAGCAGCAGCTGTTGGGAATCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGGTACAATGCAAATTATGGGAATCCGGAATCTGGTTATCCAGGGAATTATTATCTTGCTAATTACGGAATGAATCCTATGAACCGTGCTCATCCT......................................................................................................................................................GTGCAAGGTGGTGCTGAAGGTTATTCTCAATATGGACATGGGTCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACATGGTGTTGTGCCTGCTACTTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAACCAATGTTTAAACGAGTTCATCAATGACTCGAGCATGAAATTTTCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCCGCGGCTAAAGTGG-TACTTATATTCAGTCTGGCAGGGCAATTGATTTATCTCAGTTAGTATTTTGCAACTTGTGCTATCAAGTGTAGCATTTAACAGCAATGTGGATTTTCCAGCACTACTTG-TTTATGAACAAATTGATGGGAATATTTATATTTCCTTGTGAATTGTGAGATATTTTTGTGGCTCCCTTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452177" ref_strand="-" ref_description="SGN-E452177 [cSTS-15-L10]">
      <seq>gcccgagcagcagcagctgttgggaatccaggtgcagggtacaatgcaaattatgggaatccggaatctggttatccagggaattattatcctgctaatacgggaatgaatcctatgaaccctgctcatcctgtgcagggtggtgctgaaggttattctcaatatggacatgggcctggtgcttggggtggttatgatgtgcagcgagctcaaggacccagataaactagttaatgtaggctgtcacatggtgttgtgcctgctactttccggttataaccaatgtctaaacgagttcatcgatgactcgagcatgaaattttcgggcagaatcccgcggctaaagtggtacttatattcagtctggcagggcaattgatttatctcagttagtattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtggattttccagcactacttgtttatgaacaaattgctgggaatatttatatttccttgtgaattgtaatgctattttgtggctcctttttcagtcctactcccttttccccaaattaattatgctaccttgttggcaatcaaaaatagtgaaatctgattatcaaaaaatttcttactgtattgtattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="30319" stop="37306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30619" g_stop="30649" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31263" g_stop="31363" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="132" r_length="101" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150">
            <donor d_prob="0.795" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31514" g_stop="31653" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="272" r_length="140" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.985" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="326" r_length="54" r_score="0.889"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36710" g_stop="36994" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="621" r_length="295" r_score="0.853"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="629" polyA_stop="660"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E452177" ref_strand="-">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452177" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="30619" e_stop="30649"/>
          <exon e_start="31263" e_stop="31363"/>
          <exon e_start="31514" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="36994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCGAGCAGCAGCAGCTGTTGCGAATCCAGGTACTTTCCTTATCCAAGTTCAGAAACTGTAAAATGCAGATATGAATAAGCACATTGAAAGATCCATCTTCTGATAAAGACAAATTTTCCTTGCTGTTGTGTTTCTCAGCTGAATTGTCTTTGTTTGATTGAGCACTGTTAAGCATGATTGAATAGTGACTTTGTTTTAATGTATTAAGCTGCTATATGGTTCATGCAGTTACATGGTTGTCTATTTGATTTATTGCTTCATATCAGAATTCAGAGTTTCTCTAATAATATTTACCTCAAGTTGATAGTAGAATTTATCAAATTTACCATTGGGTTTGATTCCTTCACAAGCTTCTTTCAAGTGTATTGAATTTGCTCTATATAATACTGTTTATCTCCTCTTTTATTAAATAATAAATAACAAAAAACGGGTTTGTAATAGTTTATTGGAGGTGCAAATCCCTGACAAGCTCAGTTGGATATGATTGCTTCAATTGGTGCGTTGTTTAATTTTTTGTTTGTATATAGACAGAAAGAGACGCATGTAATCTTTCGCAGCTGCTGCTTTGAAATTTCTCATACTTATTGGACATAGATTGTTAGTACTGTACCAGTTTCATGAAGTTCATCTTTACCTACACAGGTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCTGTAAGTAATTCTGTTGTGGTTTTGGCATTTCATGAGATTACAAAGTGAGCAGAAGGACAGCAGTATTTTGCTCTTTTTCATCTAGATGAAATGTGACTTCTTTTCCTTAGTATTTTAATGTCTAACTTTAGTTGTTCTTTTATATTTTAGGTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAAT-CCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAG-T--TATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTA----C---T--CCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATG</genome_strand>
        <mrna_strand>GCCCGAGCAGCAGCAGCTGTTGGGAATCCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGGTACAATGCAAATTATGGGAATCCGGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATACGGGAATGAATCCTATGAACCCTGCTCATCCT......................................................................................................................................................GTGCAGGGTGGTGCTGAAGGTTATTCTCAATATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACATGGTGTTGTGCCTGCTACTTTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAACCAATGTCTAAACGAGTTCATCGATGACTCGAGCATGAAATTTTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCCGCGGCTAAAGTGG-TACTTATATTCAGTCTGGCAGGGCAATTGATTTATCTCAGTTAGTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTGGATTTTCCAGCACTACTTG-TTTATGAACAAATTGCTGGGAATATTTATATTTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCCTTTTCCCCAAATTAATTATGCTACCTTGTTGGCAATCAAAAATAGTG-AAATCTGATTATCAAAAAATTTCTTACTGTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227479" ref_strand="+" ref_description="SGN-E227479 [cLEL-30-I23](-)">
      <seq>ggttatccagggaattattatcctgctaattacggaatgaatcctatgaaccctgctcatcctgtgcagggtggtgctgaaggttattctcagtatggacatgggcctggtgcttggggtggttatgatgtgcagcgagctcaaggacccagataaactagttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgacgacacaagcatgaaatttttgggcagaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccagattagttatcctaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="31001" stop="37236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31301" g_stop="31363" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150">
            <donor d_prob="0.795" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31514" g_stop="31653" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="203" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="257" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36710" g_stop="36936" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="484" r_length="227" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="485" polyA_stop="502"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E227479" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31301" e_stop="31363"/>
          <exon e_start="31514" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="36936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCTGTAAGTAATTCTGTTGTGGTTTTGGCATTTCATGAGATTACAAAGTGAGCAGAAGGACAGCAGTATTTTGCTCTTTTTCATCTAGATGAAATGTGACTTCTTTTCCTTAGTATTTTAATGTCTAACTTTAGTTGTTCTTTTATATTTTAGGTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTA</genome_strand>
        <mrna_strand>GGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCT......................................................................................................................................................GTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAGATTAGTTATCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355080" ref_strand="+" ref_description="SGN-E355080 [cTOS-18-I20]">
      <seq>aaggacccagataaactagttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgacgacacaagcatgaaatttttgggcagaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccaaattagttatcctaccttgttggcaatcaaaaatagtgaaaatttgattatcaaaaaaattcttactgtatggtattttaaaaacttgactaaaaaaaattcgtactagtattttatatatggttttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="31293" stop="37354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31593" g_stop="31653" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="115" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36710" g_stop="37061" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="467" r_length="352" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E355080" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31593" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="37061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGTATTTTAAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATATGGTTTTAAAAACCGTTAG</genome_strand>
        <mrna_strand>AAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGTATTTTAAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATATGGTTTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355423" ref_strand="+" ref_description="SGN-E355423 [cTOS-25-G20]">
      <seq>aaggacccagataaactagttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgacgacacaagcatgaaatttttgggcagaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccaaattagttatcctaccttgttggcaatcaaaaatagtgaaaatttgattatcaaaaaaattcttactgtatggtattttaaaaacttgactaaaaaaaattcgtactagtattttatatatggttttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="31293" stop="37354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31593" g_stop="31653" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="115" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36710" g_stop="37061" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="467" r_length="352" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E355423" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355423" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31593" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="37061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGTATTTTAAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATATGGTTTTAAAAACCGTTAG</genome_strand>
        <mrna_strand>AAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGTATTTTAAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATATGGTTTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354551" ref_strand="+" ref_description="SGN-E354551 [cTOS-17-G4]">
      <seq>aaggacccagataaactagttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgacgacacaagcatgaaatttttgggcagaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccaaattagttatcctaccttgttggcaatcaaaaatagtgaaaatttgattatcaaaaaaattcttactgtatgggtattttaaaacttgactaaaaaaaattcgtactagtattttatatatgggttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="31293" stop="37354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31593" g_stop="31653" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="115" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36710" g_stop="37060" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="467" r_length="352" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E354551" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31593" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="37060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGTATTTTAAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATAT-GGTTTTAAAAACCGTTA</genome_strand>
        <mrna_strand>AAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGGTATTTTAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATATGGGTTTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220396" ref_strand="+" ref_description="SGN-E220396 [cLEL-12-O13](-)">
      <seq>gttaatgtaggctgtcacacggtgttgtgcctactactctctggttataatcaatgtctaaatgagttcatcgccgacacaagcatgaaatttttgggcagaatccgcggctaaagtggttacttatattcagtctggcaaggcaatcgatttatctcagttattttgcaacttgtgctatcaagtgtagcagttaacagcaatgtagattttccagcactacctgttttttgaacaaatttctgggcatatttatatctccttgtgaattgtaatgctattttgtggctcctttttcagtcctactccaaattagttatcctaccttgttggcaatcaaaaatagtgaaaatttgattatcaaaaaaattcttactgtatggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="31311" stop="37297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31611" g_stop="31653" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35517" g_stop="35570" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="97" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36710" g_stop="36994" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="382" r_length="285" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="385" polyA_stop="401"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E220396" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E220396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31611" e_stop="31653"/>
          <exon e_start="35517" e_stop="35570"/>
          <exon e_start="36710" e_stop="36994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTGGTACTTCAGAATGGATCTTAGAATTAGATTTGAAATTTTATACTAAATGATCTGAGATTGTTGTTTAATATTGTTACTTTCTTGCTTTTTGTGAGAAAAGTTTTAGCTGCCTGCTGGACTCTTATTAATGTCTGTTGCATCTAATCTAAATAGTTGTCTGCAAAATCAGTAATTACATTTTCTGATATGTGGTCCTTTAGCCTCGTATTTACTTATAAAGAAATGAAATTTACTTCGTTTAATGACATTGCACTATTAAAACTTTCTTAGAGTTGATCTACTATCAGATTGTAAATTATGGGAAACCACTGGAGAAAGAATGTCTAGTTTCTGTCAGATCCTGAATGCATTTTAAAATACATAATTACTTTTGTTCTTGTGAGTAATATTGAAAAAGAATATTACTGAATTGTTGTCATGTCTACATTATTAATTCAGACCCTATTTATAGACACTACAATACAATCCTTTACCAAGTAGGATACTATTTACTATTTCTATTTCTATTCTAAATAAGATTGTATAAATCTATTTCTATTCTAATAGGATTGTATAAAGTAATTCCTATTATAATAGGATTGTAAAAATTTATTTCTTTCTAATAGGATCGTATAAACTTATTTCTATTCTAATAGAATTGTATAAATCCATACCTGTTCTAACACTTCCCCTCAAGCTAGTGCATACAATTCATGTACTTAGCTTGTTACAAATGTAATTAATACGAGGACCGATGAGGGGCTTGGTGAGATATCTGCAAGTTGATTAGTTGACTTCACAAAATTTGCAATCAATCTTAATGTGCTTAATCTTTTCATGAGATACTGAATTTGATGCATAATGCCAATAAAATACAGAGTGATAAATGATAAAATTACTGTGTTGAACAACCCAAGCCAAACTTGCGACAACTACTTTTACCATAGAGTGACTTACATAATCGACCCACAAGGCTACCAAAATCCCCCGAGCAACAAAGTGCTCAAAATCTAGTATGAAGTATATCGATCGTGTTGGAATCAATAGATGCGTCGTTATTAAACAAGTAGGATACTATTTACTATTCTTATTTCTATTCCTATTCCTATTCTAAATAGGATTGTATAAAGCTATCCCTATTCTAGTAGAATTGTATAAACTTTCATATTCTAATCAGAGCCAAACCCCGGATTTAAAGTGCCTAGCATTAGCGAATTTTTCAATAACGATTAATGGATAATAGCAAATTTTTCAATAACGATTAATGGATAATAGCGAATTTTTTAATGACGGTTAATGGATAATGTCGTATTTGACTAGTCATTTATAGCTATTGGATGGTCATGAGTGTGAATCCCCTTATTGACAATTTTGATGTTATAAATAATCATCAAGTTTGTAATAAAAAGAGTAAAAAATGGGATGTTGACGAGAATTGAACCTAGGGGTGAATTTCCTTGCTTCTACCAGCGTACTAAAGCAGTTTTATGTTTCTCTAAGGGTGCGCTCTTATTATATTCGCTGTTTCTATTGAGATAGATATCTATATATACATGATTTTTTTCGAAGTTAATGGGTGCACGCGCACCCCACCTATACATGTGGGTTCGTCTCTAATTCTAATAGGATTGTATAATTTTATTCATGTAATAGGATTGTATAAATATACAAATCTATTCATGTTCTAACAGTTCTTACAACAACAACTACGCCTCAATTTCAAGCTAGTTGGGGTTGGCTGAATGAATCGTCGGCATCATAAATGCTCTATTTGGGGTTGTGTTGTTTCAATACTCCATATTTAAGGATTCTCAAACATTAGAGGTCCCCTGATATACTCTAGTAACTTTATTTCTTCTAATATACCAAGGCCTCAATTTGTTTGCACTTAATAAAGGTCTTCAGATCTCTGTTATTAAGTCTGAACTTACTGTCGTTCTATAGAACTTTATTTTTACTTTGCCTGGGTATTCTCTTATCTCATAACTTTGGCAGTATTCCATTTCGATATTCCTACTATAGTGCAGTTGCTAGGCATAACATCTGTCAAATTGCTCTTCTGGAATATTGGAACTGCATTTCTGAACCGTCTTCATTAGATGCCTCAGTTCCATCTAATCTCACCTCAACTTCATTACTATCTTGCTGGCTGGACTCGCAGTGTGTGTATTTTGTCTTACTCTACTTCCTAAATCCCTTACTCTCTTAAGTGCTTCTCCGCTGCTCGAACTATTAATTGTTCTTGATGTTAAAAAAATGTAAAGAAAAGTCGTCTTTCATTGTGAAAGAAAAATGAAGTCACTTAATCAAGTATAAAGATTCATTTATGGATTTGGTTGTCTATCACGCCTAAAAGTGCGCAGGTATTATGTTTTCCTCATGAGAAAAAGTTCCGGGAATCTTTTAGATGATCGTTTTTTTTTTGTCATTATTAAAAGAAGATTTGAATGCTCAGTATGGTATGACATTGTGCATATTATTTGTTCGCATCCAAAGTTATCCCAGGATTATTATCCTATAACCACGGGACTAATTTATCCCCCGGGTGGGATAAAATAACACCATCTTTGAGGTATAAATTTCAGTTATACCTTCAACGAAACAAGTATAAAATTTTAATCTCCAAACTTAATCTGGGTATATGGCACCTTTCTGTTACACAGGGGTGGGGTGGGGTGGGTGGGTGGTACTAAACTAGTAGGATATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTTAGTACATGTGATATTCTATAGGGCACAGGCCCAGGAAACCATGTACATATGAACTCATGTGTGGACAGATGGAGTGCTCTGGGATGGAAACTTTACCGCAATAACTTTCCCATTGCTGCACCGCATCTCAAAAACAAGGGTGAATAATGTACATGCTCTACAAGGGTGAATTCTTTTCATTCTTTATTGGTAAGGATGTTGACAGACATCAGAAAACTGAAGCTAATTGAGTTGGAAAGAAAAAAAATTAACTGAAAAGAAGGAGAATGTATGGGGTTGAACTTTGGGAGATAATCTAGCTGTGTTGCTACGAGATTGTTTTTCTTGCTCAAGTAGAGCTTCTTGATATTTGTTATTCTGTTCTACTGCTTTATTGATTCTGCGAAACCTAATTTGTAGTTCAAGTCACTGTTTTATTTGGTCTCATGGTTTGAAGGCAAAGCACTCTTTTTAGGTTTTCAAAGGTGTCTTTCATTCATATGATGAAATCTGCTACTTTTTAGGACCCATCCTTGTAATTCATATTCTAATCTTCTTTTATTTCCAGGTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGGGTGAGTGTTTACTTATCATTATCCAAATGAGTACTTTTATCAGATAACTGCTTGTTTTAAAAGTAATTTAGCAACATTCTAAGACCAGTTTTCTCTTCTCTCTATCTTTTTGATTTTCTTTTGGATCTCTTTAGCATTTAATAACAGAAATATTGCAATATTTAGGCCCTATTTATTAAGACAACATGTTTTTATTGATGAGTATTGTGAACTTAGGTTGTCCTGGACTTCACATAATGGTTTCCTCATGGAAAAGTTTGACAGCAAATGTGGGGAAGAGATACATGTATGAGGGAAAGTCAATTCTTGCTTCCTTCTTTGATACCTCTGTTCCATAAAATGATCCACTACCATTTAAATATTGCTTTTACTCTACTTTTTAGTACAAATTACCATAACTTAACACCATTATGGATTCCTTATCACCACATTGATCATTCATTATAAGCTAGCGAACTAGTGATCTTTACATTAAACCATCTGGAAGATTACTTTAAGGAAGTATTTTGTTTTGTACACTTTCCACCAATAGTATCTTTTATGAAGAATGTATTAAGTCAGACTAACTAGGTTCGCAGTTGCAAAATTATAGCTTGAAAAAGTTGGTCGAAATGCCAAGTTGTTTCATCAAATGTTGTAGTAGTCATTTTCTTCTTCTTCTATTTAAATAATAACACCTAAACTTCTATCCCATACATGCTTGAGTTGGTTGTTTGAATCCTCTATATCTGATGCATCTTTTAAGACAAAAATTAGAGATTCTGTAACACAGGGGGTTTCCCAAAATCTCCTACTTATGCCTACTGACATGCAAATCTCAAAACAAACTAGGAAATCCTTGGCAAACACAGGATGTAATGTAAGCAAACTAACACTGTTTTGAATCAATACAAGCTGGATGAGTTGCTCGTATTGTTCTTTTTGCATGGATTCTTATAGATTGTTAAAAAAGTGAACTGATTGTAAGTGAATCATCTTCTTATGATTACGACTTGTGGTTGCTGTAAAGACCTTACTGTGTTTGGCTTTTTTAGATCTACACCGTTGTTTGAGATAACTTGAACTAGTATATGCACGAGAACAGTGTTGTTTGTTTTTGCATATCGTCTAAAGAAAGTTTTGTTTGTTGTATGCAACAGGCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATG</genome_strand>
        <mrna_strand>GTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAATCAATGTCTAAATGAGTTCATCGCCGACACAAGCATGAAATTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243334" ref_strand="+" ref_description="SGN-E243334 [cLEF-16-G5]">
      <seq>tatgtttgacattaaaagattacaaattataatccctctctctgctaaaaggatattgatttttctgtatatccaagtgttgtaattaaatgtcgtaaattagtttagctggtaaggcagacacttttcttagagctaattcaatcgcataagacagtttccatgtgccattttacctttaccatcttgtcagcttattaccttttttacttttaccatcttatctcataaaatcttgatgacttttgacttaaacgggcattgaaatatttggggctcaaagtctgtttgcaaatttgtgatgagcacttctcttgtaccgtgttggtgtatcaaagttgataggtacagagggacattctgctatgcattgtgtgccaaaaataacttcaatcaaatgtggtatatggtagctttctagtagcgtttgttgtgatccgttctcattcccttatatttgctgggaggagttgcaatttctgtatgaacttgcacttgtggatggaaatatgagatttacgataattcatttaacccaagatggagttttaagttatcccagagctcttcgaagttcgaaaaatgaccttaaattgggtttaaaggcaaacattttgaagtgctcttacctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="34036" stop="35269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34336" g_stop="34969" g_length="634"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="634" r_length="634" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E243334" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34336" e_stop="34969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTT</genome_strand>
        <mrna_strand>TATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAAAATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544984" ref_strand="+" ref_description="SGN-E544984 [TUS-67-J15](-)">
      <seq>gccaaacttggaagagttttaggaccagtatatgatggtgccagaagcatcaaagaagtcattgatggaagagtatatgcccagaactctgtcgtccaacctcatggcatgtctccacaatatctgttcaggagtaactctacacatctagagaagtgtgggacagaagcagagaaggaccgctctcaagttaaacagcaacatggccagtgcatggttgccaagtcgtccgctagtatgagttttgagatgaacactaacccatattaccatacacaggcaagggtagcacagttgggaggtcaaatcgccatggatgcaaaattactacaggcacaaacacagtttggtgcagtcggtgctgcagctgtcgctgttgctgctcacagagaggtcggcaccgttcagtatggtctataacctagtcgatactattgtttgatggttctttgaatcaagtgaggacatccaccttgcagtgagacagttcacgatatgcattttccctcaaatcaatcagcatgggagatttgaagagggatctgttaacccggttaatgattttaccatttattagttgtcagggtctctaaataggtattctttaggttcaggttgccctgttgagttagtatttatgcccccttgtacatatatatatatataggcgcgatgcattaattgatataatgaagaaaaaatattgttcttccaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="43067" stop="41753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42767" g_stop="42056" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42055" i_stop="41777" i_length="279">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.827" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41776" g_stop="41760" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="713" r_stop="729" r_length="17" r_score="0.706"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E544984" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42767" e_stop="42056"/>
          <exon e_start="41776" e_stop="41760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTCCCATTTTTTTAACTCTAAGAGAACTCATTTGAAACAATGAATCATCAAAAGAGGTAATATAATTTGAAACAATGATGAGGTAATATAATTATAAATAAGGAAAAAATTGTATATAATAGCAAATTAAGAAATTAAATTAAGTATTATAATTACACTTTGATTTAATTGTACCCCGTAGCAAGCTATTTGTCAGTCACCTCTCTGTTTTTCGCGCCATCTCTTGCTCCCTCACTTTTATACAAACATAAGTGTATAAAATGCGTTTATGTTTGTATAAAGCGAGAAATATACAAAAA</genome_strand>
        <mrna_strand>GCCAAACTTGGAAGAGTTTTAGGACCAGTATATGATGGTGCCAGAAGCATCAAAGAAGTCATTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTC.......................................................................................................................................................................................................................................................................................CAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397073" ref_strand="+" ref_description="SGN-E397073 [TUS-44-H16](-)">
      <seq>acatggccagtgcatggttgccaagtcgtccgatagtatgagttttgagatgaacactaacccatattaccatacacaggcaagggtagcacagttgggaggtcaaatcgccatggatgcaaaattactacaggcacaaacacagtttggtgcagtcggtgctgcagctgtcgctgttgctgctcacagagaggtcggcaccgttcagtatggtctataacctagtcgatactattgtttgatggttctttgaatcaagtgaggacatccaccttgcagtgagacagttcacgatatgcattttccctcaaatcaatcagcatgggagatttgaagagggatctgttaacccggttaatgattttaccatttattagttgtcagggtctataaataggtattctttaggttcaggttgccctgttgagttagtatttatgcccccttgtacatatatatatatataggcgcgatgcattaattgatataatgaagaaaaaatattgttcttcccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="42867" stop="41753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42567" g_stop="42054" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="515" polyA_stop="525"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E397073" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42567" e_stop="42054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTCCC</genome_strand>
        <mrna_strand>ACATGGCCAGTGCATGGTTGCCAAGTCGTCCGATAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTATAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544985" ref_strand="+" ref_description="SGN-E544985 [TUS-67-J15]">
      <seq>gcagaatcctatgtttgatcatagacaagtaacagaaaaggcaactgctggcgtcagagtctcagacccgaaggttttgcgaccaccacctcgagtacccacagccaaacctggaagagttttaggaccagtatatgatggtgacagaagcatcaaagaagtcactgatggaagagtatatgcccagaactctgtcgtccaacctcatggcatgtctccacaatatctgttcaggagtaactctacacatctagagaagtgtgggacagaagcagagaaggaccgctctcaagttaaacagcaacatggccagtgcatggttgccaagtcgtccgctagtatgagttttgagatgaacactaacccatattaccatacacaggcaagggtagcacagttgggaggtcaaatcgccatggatgcaaaattactacaggcacaaacacagtttggtgcagtcggtgctgcagctgtcgctgttgctgctcacagagaggtcggcaccgttcagtatggtctataacctagtcgatactattgtttgatggttctttgaatcaagtgaggacatccaccttgcagtgagacagttcacgatatgcattttccctcaaatcaatcagcatgggagatttgaagagggatctgttaacccggttaatgattttaccatttattagttgtcagggtctctaaataagtattctttaggttcaggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="43557" stop="41850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43257" g_stop="43154" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43153" i_stop="42767" i_length="387">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42766" g_stop="42150" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="721" r_length="617" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E544985" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43257" e_stop="43154"/>
          <exon e_start="42766" e_stop="42150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAGGTAAGGTTGACATTGTCTGTGCTGGCACTCATAGTGATAATGTACCTTTTTGTCCACATCTTCATAGTGAACTCACATATTTCACCACATGTAATAATACATTGGATGAACTGGAACTCAGTACTCGGCTCACAAGAAGTCAATTTAGGGAATCTTCTCAAGTTATATCCCCTGCTTGTGGAAGAGATTGGGGGGGGGGGGGACAAATAAGGATGAGGAGAGATCATATTTAAAGGTGCCCTAGTGAGTATATACGGAATGCTGAAACTTAGGAAGTTTCTTGTGCTTGTTGGAATCGCTTTTAATGTCCTTGTCAAATATTACTTAGTGGGTTGTGCATGTCTGCTTGTTTGATTCTTCTTTGATATTCATTTCTATCATTTTCAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTG</genome_strand>
        <mrna_strand>GCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAG...................................................................................................................................................................................................................................................................................................................................................................................................CCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAAGTATTCTTTAGGTTCAGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729843" ref_strand="+" ref_description="SGN-E729843 [LA22BB07]">
      <seq>cacagaaggatgacattcgtgaactaatatttagggagatacttgagtatcatcctcaacttctgaaggactacatggctggaaatagtggtgcaaattttatctatcctagtgccattggtaatttcagaaggcaatttgcttatctagaggagaatagtggtaaaagtggcccagtaatacctcctggtcgaaagcacgtctctctcccgcgatctactgtaaattccagtaccatcccccccagaacacagcagaatcctatgtttgatcatagacaagtaacagaaaaggcaactgctggcgtcagagtctcagacccgaaggttttgcgaccaccacctcgagtacccacagccaaacctggaagagttttaggaccagtatatgatggtgacagaagcatcaaagaagtcactgatggaagagtatatgcccagaactctgtcgtccaacctcatggcatgtctccacaatatctgttcaggagtaactctacacatctagagaagtgtgggacagaagcagagaaggaccgctctcaagttaaacagcaacatggccagtgcatggttgccaagtcgtccgctagtatgagttttgagatgaacactaacccatattaccatacacaggcaagggtagcacagttgggaggtcaaatcgccatggatgcaaaattactacaggcacaaacacagtttggtgcagtcggtgctgcagctgtcgctgttgctgctcacagagaggtcggcaccgttcagtatggtctataacctagtcgatattattgtttgatggttctttgaatcaagtgaggacatccacccttgcagtgagacagttcacgatatgcattttccctcaaatcaatcaccatgggagatttgaaagatgaatctgttaaccccggttaatgattttaccattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="44236" stop="41895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43936" g_stop="43826" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43825" i_stop="43726" i_length="100">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43725" g_stop="43624" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="214" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43623" i_stop="43297" i_length="327">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43296" g_stop="43154" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="357" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43153" i_stop="42767" i_length="387">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42766" g_stop="42195" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="932" r_length="575" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E729843" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>928</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43936" e_stop="43826"/>
          <exon e_start="43725" e_stop="43624"/>
          <exon e_start="43296" e_stop="43154"/>
          <exon e_start="42766" e_stop="42195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACA-AAGGATGACATTCGTGAACTAATATTTAGGGAGATACTTGAGTATCATCCTCAACTTCTGAAGGACTACATGGCTGGAAATAGTGGTGCAAATTTTATCTATCCTAGGTTGTAATATACTTCTCTACTATTTCTAGTCTCTATTTTCTTGTACCACTATATCTAATCTAAATTACTGACTGATGGTGTGACAATCATTGAATTGCAGTGCCATTGGTAATTTCAGAAGGCAATTTGCTTATCTAGAGGAGAATAGTGGTAAAAGTGGCCCAGTAATACCTCCTGGTCGAAAGCACGTCTCTCTCCCGCGGTATGATTCCATGAGTTGTTTGTCTTGTTGGTTGTGTCAATGAATATGTCCTGTTCCATTTCTTTTATGCTTCTCTTCACTGTATCTTCCCAAAAAAGAAGTTTTTGTTTGTTCTTGTATTTGCTGGAAAAGTAACCTGCCTGAAAAGAAGTTGTACTTGCATACTACTGAGGAAGTTTGGATTTGGAATATTAACTTGTTCATCACATTGGAAAAACTGTTACCTTAGAGCATGCCCCTTTCCCCCTTTTCCTTTTTGCTCTCTCCTTTCCTTTTTCAGTGTGCTTATTTGGGGCTTCATTACATATATTCTTAAATGTGTTGCAGATCTACTGTAAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAGGTAAGGTTGACATTGTCTGTGCTGGCACTCATAGTGATAATGTACCTTTTTGTCCACATCTTCATAGTGAACTCACATATTTCACCACATGTAATAATACATTGGATGAACTGGAACTCAGTACTCGGCTCACAAGAAGTCAATTTAGGGAATCTTCTCAAGTTATATCCCCTGCTTGTGGAAGAGATTGGGGGGGGGGGGGACAAATAAGGATGAGGAGAGATCATATTTAAAGGTGCCCTAGTGAGTATATACGGAATGCTGAAACTTAGGAAGTTTCTTGTGCTTGTTGGAATCGCTTTTAATGTCCTTGTCAAATATTACTTAGTGGGTTGTGCATGTCTGCTTGTTTGATTCTTCTTTGATATTCATTTCTATCATTTTCAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCA-CCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTG-AAGAGGGATCTGTTAA-CCCGGTTAATGATTTTACCATTTA</genome_strand>
        <mrna_strand>CACAGAAGGATGACATTCGTGAACTAATATTTAGGGAGATACTTGAGTATCATCCTCAACTTCTGAAGGACTACATGGCTGGAAATAGTGGTGCAAATTTTATCTATCCTAG....................................................................................................TGCCATTGGTAATTTCAGAAGGCAATTTGCTTATCTAGAGGAGAATAGTGGTAAAAGTGGCCCAGTAATACCTCCTGGTCGAAAGCACGTCTCTCTCCCGCG.......................................................................................................................................................................................................................................................................................................................................ATCTACTGTAAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAG...................................................................................................................................................................................................................................................................................................................................................................................................CCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATATTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCACCATGGGAGATTTGAAAGATGAATCTGTTAACCCCGGTTAATGATTTTACCATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308982" ref_strand="+" ref_description="SGN-E308982 [cLEY-23-H15]">
      <seq>cagaatcctatgtttgatcatagacaagtaacagaaaaggcagctgctggcgtcagagtctcagacccgaaggttttgcgaccaccacctcgagtacccacagccaaacctggaagagttttaggaccagtatatgatggtgacagaagcatcaaagaagtcactgatggaagagtatatgcccagaactctgtcgtccaacctcatggcatgtctccacaatatctgttcaggagtaactctacacatctagagaagtgtgggacagaagcagagaaggaccgctctcaagttaaacagcaacatggccagtgcatggttgccaagtcgtccgctagtatgagttttgagatgaacactaacccatattaccatacacaggcaagggtagcacagttgggaggtcaaatcgccatggatgcaaaattactacaggcacaaacacagtttggtgcagtcggtgctgcagcttgcgctgttgctgctcacagagaggtcggcacccgtcagtatggtctataacctagtcgatactattgtttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="43556" stop="42025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43256" g_stop="43154" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43153" i_stop="42767" i_length="387">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42766" g_stop="42325" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="545" r_length="442" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E308982" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43256" e_stop="43154"/>
          <exon e_start="42766" e_stop="42325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAGGTAAGGTTGACATTGTCTGTGCTGGCACTCATAGTGATAATGTACCTTTTTGTCCACATCTTCATAGTGAACTCACATATTTCACCACATGTAATAATACATTGGATGAACTGGAACTCAGTACTCGGCTCACAAGAAGTCAATTTAGGGAATCTTCTCAAGTTATATCCCCTGCTTGTGGAAGAGATTGGGGGGGGGGGGGACAAATAAGGATGAGGAGAGATCATATTTAAAGGTGCCCTAGTGAGTATATACGGAATGCTGAAACTTAGGAAGTTTCTTGTGCTTGTTGGAATCGCTTTTAATGTCCTTGTCAAATATTACTTAGTGGGTTGTGCATGTCTGCTTGTTTGATTCTTCTTTGATATTCATTTCTATCATTTTCAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGAT</genome_strand>
        <mrna_strand>CAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAGCTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAG...................................................................................................................................................................................................................................................................................................................................................................................................CCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTTGCGCTGTTGCTGCTCACAGAGAGGTCGGCACCCGTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208695" ref_strand="+" ref_description="SGN-E208695 [cLEC-39-N23]">
      <seq>gcgatctactgttaattccagtaccatcccccccagaacacagcagaatcctatgtttgatcatagacaagtaacagaaaaggcaactgctggcgtcagagtctcagacccgaaggttttgcgaccaccacctcgagtacccacagccaaacctggaagagttttaggaccagtatatgatggtgacagaagcatcaaagaagtcactgatggaagagtatatgcccagaactctgtcgtccaacctcatggcatgtctccacaatatctgttcaggagtaactctacacatctagagaagtgtgggacagaagcagagaaggaccgctctcaagttaaacagcaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="43600" stop="42264"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43300" g_stop="43154" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43153" i_stop="42767" i_length="387">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42766" g_stop="42564" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="349" r_length="203" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E208695" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>350</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208695" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43300" e_stop="43154"/>
          <exon e_start="42766" e_stop="42564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGATCTACTGTAAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAGGTAAGGTTGACATTGTCTGTGCTGGCACTCATAGTGATAATGTACCTTTTTGTCCACATCTTCATAGTGAACTCACATATTTCACCACATGTAATAATACATTGGATGAACTGGAACTCAGTACTCGGCTCACAAGAAGTCAATTTAGGGAATCTTCTCAAGTTATATCCCCTGCTTGTGGAAGAGATTGGGGGGGGGGGGGACAAATAAGGATGAGGAGAGATCATATTTAAAGGTGCCCTAGTGAGTATATACGGAATGCTGAAACTTAGGAAGTTTCTTGTGCTTGTTGGAATCGCTTTTAATGTCCTTGTCAAATATTACTTAGTGGGTTGTGCATGTCTGCTTGTTTGATTCTTCTTTGATATTCATTTCTATCATTTTCAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACAT</genome_strand>
        <mrna_strand>GC-GATCTACTGTTAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAG...................................................................................................................................................................................................................................................................................................................................................................................................CCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248007" ref_strand="+" ref_description="SGN-E248007 [cLEF-47-C24]">
      <seq>gtatacacctgctattgatatctggagcatcgggtgcatgtttgctgaggttttgacggggaaaccattatttccgggcaaaagtgttgttcaccagttggatttgattactgatcttctggggacgccatcagttgatattgtatctggggttcgtaatgaaaaggcaaggaagtacttgacagatatgaagaaaaaaagcccagttccttttactgagaaatttcgaaaagcagatcctttggcacttcgactgttgcagaggttgttagcatttgatccaaaggatcgcccaactgctgaagaggctttggctgatccgtacttcaagggactggccaagattgagagggaaccttctagtcaaccaatctcgaagctggagtttgagtttgagcgacgaagggtcacaaaggatgacattcgtgaactaatatttagggagatacttgagtatcatcctcaacttctgaaggactacatggctggaaatagtggtgcaaattttatctatcctagtgccattggtaatttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="44857" stop="43508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44557" g_stop="44407" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44406" i_stop="44316" i_length="91">
            <donor d_prob="0.661" d_score="1.00"/>
            <acceptor a_prob="0.141" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44315" g_stop="44160" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="307" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44159" i_stop="44038" i_length="122">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44037" g_stop="43826" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="519" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43825" i_stop="43726" i_length="100">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43725" g_stop="43709" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="536" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E248007" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44557" e_stop="44407"/>
          <exon e_start="44315" e_stop="44160"/>
          <exon e_start="44037" e_stop="43826"/>
          <exon e_start="43725" e_stop="43709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATACACCTGCTATTGATATCTGGAGCATCGGGTGCATTTTTGCGGAGGTTTTGACGGGGAAACCATTATTTCCGGGCAAAAGTGTTGTTCACCAGTTGGATTTGATTACTGATCTTCTGGGGACGCCATCAGTTGATATTGTATCTGGGGTAAGAGCTGTCAGTTGGGAGTAATATTTTTTTGTTGATGTTAGCATTGCCTGACAGCATGTTGATAGAAGAGTACTCCTCTTGAGTGCAGGTTCGTAATGAAAAGGCAAGGAAGTACTTGACAGATATGAAGAAAAAAAGCCCAGTTCCTTTTACTGAGAAATTTCGAAAAGCAGATCCTTTGGCACTTCGACTGTTGCAGAGGTTGTTAGCATTTGATCCAAAGGATCGCCCAACTGCTGAAGAGGTACACTCCCTCATATATTCCTGATGTTAAGATTACGTGAATGGCATATCCACGGCATATCCACGTGCTTGTCTCTTTCTAATTTCATTTTCATTTTGTGTGTTTTTCCTCCTATCTTTTAGGCTTTGGCTGATCCGTACTTCAAGGGACTGGCCAAGATTGAGAGGGAACCTTCTAGTCAACCAATCTCGAAGCTGGAGTTTGAGTTTGAGCGACGAAGGGTCACAAAGGATGACATTCGTGAACTAATATTTAGGGAGATACTTGAGTATCATCCTCAACTTCTGAAGGACTACATGGCTGGAAATAGTGGTGCAAATTTTATCTATCCTAGGTTGTAATATACTTCTCTACTATTTCTAGTCTCTATTTTCTTGTACCACTATATCTAATCTAAATTACTGACTGATGGTGTGACAATCATTGAATTGCAGTGCCATTGGTAATTTCA</genome_strand>
        <mrna_strand>GTATACACCTGCTATTGATATCTGGAGCATCGGGTGCATGTTTGCTGAGGTTTTGACGGGGAAACCATTATTTCCGGGCAAAAGTGTTGTTCACCAGTTGGATTTGATTACTGATCTTCTGGGGACGCCATCAGTTGATATTGTATCTGGG...........................................................................................GTTCGTAATGAAAAGGCAAGGAAGTACTTGACAGATATGAAGAAAAAAAGCCCAGTTCCTTTTACTGAGAAATTTCGAAAAGCAGATCCTTTGGCACTTCGACTGTTGCAGAGGTTGTTAGCATTTGATCCAAAGGATCGCCCAACTGCTGAAGAG..........................................................................................................................GCTTTGGCTGATCCGTACTTCAAGGGACTGGCCAAGATTGAGAGGGAACCTTCTAGTCAACCAATCTCGAAGCTGGAGTTTGAGTTTGAGCGACGAAGGGTCACAAAGGATGACATTCGTGAACTAATATTTAGGGAGATACTTGAGTATCATCCTCAACTTCTGAAGGACTACATGGCTGGAAATAGTGGTGCAAATTTTATCTATCCTAG....................................................................................................TGCCATTGGTAATTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E286338" ref_strand="+" ref_description="SGN-E286338 [cLES-11-C4]">
      <seq>ttgctctctctctcttctccatctttcaaaacccgaaaaagggttacttctttctacacccttcgttcattttctgttcatttttttgtaggattttaggctcaactgatactaattttgtgtataaaaatcatactgttttcttcaaaagtggggttcgctctttgttagtacgtttcaatacgttgttgacgtcggtggggcgaagtgctctgctgattctctgatttattccatttggggttgttcagatttgttttatttttggatatttttgatctgatcttctgtataagatcaggggaacctagagaagaaaagggtaccttcagatatcctctttttttgaatttattcgttacccagattgtttaaagtcttcaaaagatgcagcaagatcagcgcaagaagagttccaaagaagtggagttcttcaccgagtacggtgatgctaataggtataaaattttggaagttataggcaagggaagttatggagtagtttgtgctgcaattgacactcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="47864" stop="45738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47564" g_stop="47154" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47153" i_stop="46153" i_length="1001">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46152" g_stop="46038" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="526" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E286338" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E286338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47564" e_stop="47154"/>
          <exon e_start="46152" e_stop="46038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTCTCTCTCTCTTCTCCATCTTTCAAAACCCGAAAAAGGGTTACTTCTTTCTACACCCTTCGTTCATTTTCTGTTCATTTTTTTGTAGGATTTTAGGCTCAACTGATACTAATTTTGTGTATAAAAATCATACTGTTTTCTTCAAAAGTGGGGTTCGCTCTTTGTTAGTACGTTTCAATACGTTGTTGACGTCGGTGGGGCGAAGTGCTCTGCTGATTCTCTGATTTATTCCATTTGGGGTTGTTCAGATTTGTTTTATTTTTGGATATTTTTGATCTGATCTTCTGTATAAGATCAGGGGAACCTAGAGAAGAAAAGGGTACCTTCAGATATCCTCTTTTTTTGAATTTATTCGTTACCCAGATTGTTTAAAGTCTTCAAAAGATGCAGCAAGATCAGCGCAAGAAGGTTTCACTCTTTCTTTATCTTCCCCTTTGAAATTCTTTAATAAAAAGGAGATCTTGATTTAGATTTGTTATTTCTAGCTTTTAAGATTTGACTGTATCTAGTAAAGTACCCAAATTTGCCTTAAAAGACTAGTCATTACAGCCAAAATTGATTGATTGAGTCATCTACGATGATTATGTAACTGTTTGTTTATTTCAGGAAGCATGAAGTTGTTGACTAATTTTAGCTGCTAATTGAGGACTGAGTTATTTGATTATCAGTCATCTTCTAACCATATGAAGTTGTTGACTAATTTAGGCTGCTTTTTATTTAGAATATGTTATTTAGCAGAGTTGGAGAATTTGCATATGAAGGACTAAGTTATTTGATTTATCAGAAATTTTAGTAATCTCTTAACCATATGAAGTTGTTGACTAATTTAAGCTGCTATGTAAAGTATTTAGAAATGTAGGTAGGTAACTCATTAAACAGAGATGGATTAATTGCATATGGAGGACTAAGTTATTTTAGTAATCTTTAAGCATATTGCAAATTAACATACTTGTGAAAATGCCCTTGTGGGATAAATTGTTTTGTCTTTTTTGTGGGGCAGCATTCTATTTACTTTCCTTTCATAGTTTTGAAGTGTTCTTTATTTTCCTATGCTTTTCTTCCTTTACTGGATTCTGGACTTCTACTTCATGCGAGAACTTCTGTGTTAGTTTGAAATGTAATCTGACGTTGTAGTCCTTGGCTTGGGCCTCGTTTGACTCTGAAATAGTGTTTCGTAATTGTCTAGTCTGATTTTCAAATTGGAATGTATTGTCTATTCAAGTCATAAATTGATCCTTGATTCTCTTTATGTTACAACAGAAGTCTACTGATCTGAATATTATTGAAATTTCATCGACATATGCTTTGAGAATATCAAGCAACATGCAGATTTTTATCTTATATTTAGTTTGCCTATTAGTCAGTAGACTATGGTAAACATGTCTGATTTTTTGTTACTGATTGTACAGAGTTCCAAAGAAGTGGAGTTCTTCACCGAGTACGGTGATGCTAATAGGTATAAAATTTTGGAAGTTATAGGCAAGGGAAGTTATGGAGTAGTTTGTGCTGCAATTGACACTCATA</genome_strand>
        <mrna_strand>TTGCTCTCTCTCTCTTCTCCATCTTTCAAAACCCGAAAAAGGGTTACTTCTTTCTACACCCTTCGTTCATTTTCTGTTCATTTTTTTGTAGGATTTTAGGCTCAACTGATACTAATTTTGTGTATAAAAATCATACTGTTTTCTTCAAAAGTGGGGTTCGCTCTTTGTTAGTACGTTTCAATACGTTGTTGACGTCGGTGGGGCGAAGTGCTCTGCTGATTCTCTGATTTATTCCATTTGGGGTTGTTCAGATTTGTTTTATTTTTGGATATTTTTGATCTGATCTTCTGTATAAGATCAGGGGAACCTAGAGAAGAAAAGGGTACCTTCAGATATCCTCTTTTTTTGAATTTATTCGTTACCCAGATTGTTTAAAGTCTTCAAAAGATGCAGCAAGATCAGCGCAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCAAAGAAGTGGAGTTCTTCACCGAGTACGGTGATGCTAATAGGTATAAAATTTTGGAAGTTATAGGCAAGGGAAGTTATGGAGTAGTTTGTGCTGCAATTGACACTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331094" ref_strand="+" ref_description="SGN-E331094 [cTOD-6-O4]">
      <seq>ttcaattggcctccttgttgctctctctctcttctccatctttcaaaacccgaaaaagggttacttctttctacacccttcgttcattttctgttcatttttttgtaggattttaggctcaactgatactaattttgtgtataaaaatcatactgttttcttcaaaagtggggttcgctctttgttagtacgtttcaatacgttgttgacgtcggtggggcgaagtgctctgctgattctctgatttattccatttggggttgctcagatttgttttatttttggatatttttgatctgatcttctgtataagatcacgggaacctagagaagaaaagggtaccttcagatatcctctttttttgaatttattcgttacccagattgtttaaagtcttcaaaagatgcaccaagatcagcgcatgaagagttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="47881" stop="46849"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47581" g_stop="47154" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="428" r_length="428" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E331094" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47581" e_stop="47154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAATTGGCCTCCTTGTTGCTCTCTCTCTCTTCTCCATCTTTCAAAACCCGAAAAAGGGTTACTTCTTTCTACACCCTTCGTTCATTTTCTGTTCATTTTTTTGTAGGATTTTAGGCTCAACTGATACTAATTTTGTGTATAAAAATCATACTGTTTTCTTCAAAAGTGGGGTTCGCTCTTTGTTAGTACGTTTCAATACGTTGTTGACGTCGGTGGGGCGAAGTGCTCTGCTGATTCTCTGATTTATTCCATTTGGGGTTGTTCAGATTTGTTTTATTTTTGGATATTTTTGATCTGATCTTCTGTATAAGATCAGGGGAACCTAGAGAAGAAAAGGGTACCTTCAGATATCCTCTTTTTTTGAATTTATTCGTTACCCAGATTGTTTAAAGTCTTCAAAAGATGCAGCAAGATCAGCGCAAGAAG</genome_strand>
        <mrna_strand>TTCAATTGGCCTCCTTGTTGCTCTCTCTCTCTTCTCCATCTTTCAAAACCCGAAAAAGGGTTACTTCTTTCTACACCCTTCGTTCATTTTCTGTTCATTTTTTTGTAGGATTTTAGGCTCAACTGATACTAATTTTGTGTATAAAAATCATACTGTTTTCTTCAAAAGTGGGGTTCGCTCTTTGTTAGTACGTTTCAATACGTTGTTGACGTCGGTGGGGCGAAGTGCTCTGCTGATTCTCTGATTTATTCCATTTGGGGTTGCTCAGATTTGTTTTATTTTTGGATATTTTTGATCTGATCTTCTGTATAAGATCACGGGAACCTAGAGAAGAAAAGGGTACCTTCAGATATCCTCTTTTTTTGAATTTATTCGTTACCCAGATTGTTTAAAGTCTTCAAAAGATGCACCAAGATCAGCGCATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354941" ref_strand="+" ref_description="SGN-E354941 [cTOS-19-E20]">
      <seq>tttttttttggtatagaattttgggtgtaattattaagtttttggtaaccaaaaagtgtatggatatagatagtttgaatttaaactatctgcacctaatgttgtaaaggtcgtaatatttaccagcatcagatatttacaacaaatcaatagatacatgactattacttaaccatgatcagttaacatatatatattttcacttcatgaaatcaaactcgaaaatgacaatacaaaaaaacaaagcacaagaatactagcaaaactaataagtaaatctgtcagaaacatgaggctcatatcattcaagtttttcaaagctggcaatttttccagcaacaatcagtagcgatccatcgttaacgaaaatactgtgcatctgctgcttcattagtttcctggcacacaggactagctatgctaaccaacttcctggagttagttatcagctgagatgacagaagcacaagaaaaaataatttatcgaaaactatgctacaccagaagttcttcgggaaaaagagagagctagagtaagtaatcatttcagagctgtatcttcaatcccaaatttaacaagcggatagcatcatcagcaaaatatgcagattagtgctacttcccga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="52869" stop="54088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53163" g_stop="53788" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="626" r_length="626" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E354941" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53163" e_stop="53788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGGTTAGGTATAGAATTTTGGGTGTAATTATTAAGTTTTTGGTAACCAAAAAGTGTATGGATATAGATAGTTTGAATTTAAACTATCTGCACCTAATGTTGTAAAGGTCGTAATATTTACCAGCATCAGATATTTACAACAAATCAATAGATACATGACTATTACTTAACCATGATCAGTTAACATATATATATTTTCACTTCATGAAATCAAACTCGAAAATGACAATACAAAAAAACAAAGCACAAGAATACTAGCAAAACTAATAAGTAAATCTGTCAGAAACATGAGGCTCATATCATTCAAGTTTTTCAAAGCTGGCAATTTTTCCAGCAACAATCAGTAGCGATCCATCGTTAACGAAAATACTGTGCATCTGCTGCTTCATTAGTTTCCTGGCACACAGGACTAGCTATGCTAACCAACTTCCTGGAGTTAGTTATCAGCTGAGATGACAGAAGCACAAGAAAAAATAATTTATCGAAAACTATGCTACACCAGAAGTTCTTCGGGAAAAAGAGAGAGCTAGAGTAAGTAATCATTTCAGAGCTGTATCTTCAATCCCAAATTTAACAAGCGGATAGCATCATCAGCAAAATATGCAGATTAGTGCTACTTCCCGA</genome_strand>
        <mrna_strand>TTTTTTTTTGGTATAGAATTTTGGGTGTAATTATTAAGTTTTTGGTAACCAAAAAGTGTATGGATATAGATAGTTTGAATTTAAACTATCTGCACCTAATGTTGTAAAGGTCGTAATATTTACCAGCATCAGATATTTACAACAAATCAATAGATACATGACTATTACTTAACCATGATCAGTTAACATATATATATTTTCACTTCATGAAATCAAACTCGAAAATGACAATACAAAAAAACAAAGCACAAGAATACTAGCAAAACTAATAAGTAAATCTGTCAGAAACATGAGGCTCATATCATTCAAGTTTTTCAAAGCTGGCAATTTTTCCAGCAACAATCAGTAGCGATCCATCGTTAACGAAAATACTGTGCATCTGCTGCTTCATTAGTTTCCTGGCACACAGGACTAGCTATGCTAACCAACTTCCTGGAGTTAGTTATCAGCTGAGATGACAGAAGCACAAGAAAAAATAATTTATCGAAAACTATGCTACACCAGAAGTTCTTCGGGAAAAAGAGAGAGCTAGAGTAAGTAATCATTTCAGAGCTGTATCTTCAATCCCAAATTTAACAAGCGGATAGCATCATCAGCAAAATATGCAGATTAGTGCTACTTCCCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465750" ref_strand="+" ref_description="SGN-E465750 [cPRO-22-K7]">
      <seq>cttcttcgttgtgttgagattttcagcccaaatgaaactgagctggctcgcataacaaaaatgccaactggaaatttcaaacaaatcagcaatgcagtggagcagtgctatgacctgggagttaaccaggtccttgttaagcttggggccaatggatctgctcttttcaccaaaggagaggaacccttgcggcaacccattattaaagctgcaaaagtcattgatacaacaggagctggtgacacttttacagctgcttttgcagtggccctagtggagggtaaatctaaagaggaatgtttgagatttgctgctgcagcagcttctctatgtgttcaagtgaagggagccattccaagcatgcccgagaagagagcagtgttcaatcttcttcagtcagcttgaagactcggagtttcctttatcatctccttgtacaaaaaagtaagaggttctcaggttgatgagttgaagttccggactcttgattttcataaagaggacttcggtggagcacttgttaacttcgggaagtagcactaatctgcatattttgctgatgatgctttccgcttgttgaattggggattcaagatacagctctgaaatacttactctagctttttctgaagaacttctggtgtagcatagttttcgataaattgttcttttcttgttcttctgtcatctgagctgataataactccaggaagttggttagcatagctagtattttcgttaacgattaatcgttactgattgttgctggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="56031" stop="53193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55731" g_stop="55615" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55614" i_stop="55144" i_length="471">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55143" g_stop="54948" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="313" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54704" g_stop="54567" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="451" r_length="138" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54566" i_stop="53961" i_length="606">
            <donor d_prob="0.961" d_score="0.96"/>
            <acceptor a_prob="0.873" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53960" g_stop="53911" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="501" r_length="50" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53910" i_stop="53814" i_length="97">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.678" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53813" g_stop="53575" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="729" r_length="228" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E465750" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55731" e_stop="55615"/>
          <exon e_start="55143" e_stop="54948"/>
          <exon e_start="54704" e_stop="54567"/>
          <exon e_start="53960" e_stop="53911"/>
          <exon e_start="53813" e_stop="53575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTCGTTGTGTTGAGATTTTCAGCCCGAATGAAACTGAGCTGGCTAGAATAACAAAAATGCCAACTGGAAATTTCGAACAAATCAGCAATGCAGTGGAACAGTGCTATGACATGGTCTGTTTTTCACGTACCTGTTTATTCATTTTTTCTAAAGTTTGCATCCTAAATTCAGGACATATGCTTGCAGCATTTCACTTGATTTAGACTGTATCCGTGACCCAAAATAACTATCTGAGTTACATTTTCGGGTTCTGAGTCTAAAAGTCCCTTTTGATTTGTTATAGTTACCTGCCCTATTGATTTTGCAAAATGTAGTGGTCCTGACAGACTTTTGCTTGGTGAGTCATAAATGTCTGGTGATGGCTTTGCTTCTCCATATAAATATGATGGATTAATGCAGTGTTGTTTGTGGGGCTCTGGTTTGGTCCACCGACCTAGTAGGACATTCCTAGTTAGATTTAGCTACTTTTCCTGATTTCTTGCTCAATGTTTGGGGTGTCACAAATTACAATAGATATCTGTAAATTTGTCACTATATCAATTTGATTTTGTGGAATGATGTTTCCACGCTCTTTTGTTTCCCAGGGAGTTAACCAGGTCCTTGTTAAGCTTGGGGCCAATGGATCTGCTCTTTTCACCAAAGGAGAGGAACCCTTGCGGCAACCCATTATTAAAGCTGCAAAAGTCATTGATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTGGTAAGCATGCTGGTGCTTTCTCCCAATTTTGGTTTCAGCTTCATTAGTCTTATATTTTTTCTTCAAACATGTTTCGTTAAGCTTTTTTCTTGAGCTGAGGGTCTATCAGAGACAACCTCTCTATCGCACAAAGGTAGGATGAGGTCTGCGTACATGTCACCTTCCCCAGACCTCACTCGTGGGATCATATTGGGTATGTTGTTGTTGTAGTTACCTATCTAATAAAGGCTTGTGCATTTACAGCTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAGGTACTGTTCTAAATATTCAGAACTTCGGATTATATTAGTTGGTGCTTTACCTTAATCATAGGAGGAAAAAAAAACTGTTCAAAAGGACAGTCTCCTACGAAAAAGGGAACGAGAGTGGACTCAAGGGTATCTAGATGAAGTTCCAGTTGACAATTACTCCCTTCATTTCAATTTGTTTGTCTTACATTCCTTTTCTAATCCGTATCAAGAAAAAATGTCTTCTTTTTTTTGCAACTCTTTGATTCCAACTTCCCACATAACATGTTTAAGACCATAAGATTAAAGGCCAATTTGGTACGTTCAAATCAAAACCAAACAAACAAGCTGAAATGGAGGAATACATAATAAGATAATGTTGTCTTCACAATCTCGGCATATACATAGGTTTCCCAAATATTTTGAAACCAAAAATTAGAATGTAGATGAAAGATGAACAACAAACCAAATCTGACTTTGTTATAAACTGTGATAGTAATGAAATTTGAATGTCCCTCTTCCCTCAAATATGCCTCTGCTGTATGTGGTTCAATCAAGTTCCAGTTTCTGGTTATTGAAACACTATTGCTTCGCGTTGGTGAAAAAATTCCTTTATTTCTTGACATGAAGGTTCTCAGGTTGATGAGTTGAAGTTCCGGAGTCTTGATTTTCATGAAGAGGTGAGCAAATACTATCGATTTGCTCTTTTCTTTTGGTAAAACTTTTTCGACTTCCCATCTTCTAAACCACCATACTTGTGCATCCAATATACTTCAGGACTGCCGTGGAGCACTTGTTAACTTCGGGAAGTAGCACTAATCTGCATATTTTGCTGATGATGCTATCCGCTTGTTAAATTTGGGATTGAAGATACAGCTCTGAAATGATTACTTACTCTAGCTCTCTCTTTTTCCCGAAGAACTTCTGGTGTAGCATAGTTTTCGATAAATTATT-TTTTCTTGTGCTTCTGTCATCTCAGCTGATAACTAACTCCAGGAAGTTGGTTAGCATAGCTA</genome_strand>
        <mrna_strand>CTTCTTCGTTGTGTTGAGATTTTCAGCCCAAATGAAACTGAGCTGGCTCGCATAACAAAAATGCCAACTGGAAATTTCAAACAAATCAGCAATGCAGTGGAGCAGTGCTATGACCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTAACCAGGTCCTTGTTAAGCTTGGGGCCAATGGATCTGCTCTTTTCACCAAAGGAGAGGAACCCTTGCGGCAACCCATTATTAAAGCTGCAAAAGTCATTGATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG...................................................................................................................................................................................................................................................CTGCAGCAGCTTCTCTATGTGTTCAAGTGAAGGGAGCCATTCCAAGCATGCCCGAGAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTCGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAGTAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCAGGTTGATGAGTTGAAGTTCCGGACTCTTGATTTTCATAAAGAG.................................................................................................GACTTCGGTGGAGCACTTGTTAACTTCGGGAAGTAGCACTAATCTGCATATTTTGCTGATGATGCTTTCCGCTTGTTGAATTGGGGATTCAAGATACAGCTCTG-AA--A-TACTTACTCTAG------CTTTTT-CTGAAGAACTTCTGGTGTAGCATAGTTTTCGATAAATTGTTCTTTTCTTGTTCTTCTGTCATCTGAGCTGATAA-TAACTCCAGGAAGTTGGTTAGCATAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248236" ref_strand="+" ref_description="SGN-E248236 [cLEF-55-G23]">
      <seq>tggtgacacttttacagctgcttttgcagtggccctagtggagggtgaatctaaagaggaatgtttgagatttgctgctgcagccgcttctctatgtgttcaagtgaaaggagccattccaagcatgcctgaaaagagagcagtgttcaatcttcttcagtcagcttgaagacttggagtttcctttatcatctccttgtacaaaaaaataagaggttctcaagttgatgagttgaagttccggagtcttgattttcatgaagaggactgccgtggagcacttgttaacttcgggaagtagcactaatctgcatattttgctgatgatgctatccgcttgttaaatttgggattgaagatacagctctgaaatgattacttactctagctctctctttttcccgaagaacttctggtgtagcatagttttcgataaattattttttcttgtgcttctgtcatctcagctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="55324" stop="53307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55024" g_stop="54948" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243">
            <donor d_prob="0.720" d_score="0.98"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54704" g_stop="54567" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="215" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54566" i_stop="53961" i_length="606">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.873" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53960" g_stop="53911" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="265" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53910" i_stop="53814" i_length="97">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53813" g_stop="53607" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="472" r_length="207" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E248236" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55024" e_stop="54948"/>
          <exon e_start="54704" e_stop="54567"/>
          <exon e_start="53960" e_stop="53911"/>
          <exon e_start="53813" e_stop="53607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTGGTAAGCATGCTGGTGCTTTCTCCCAATTTTGGTTTCAGCTTCATTAGTCTTATATTTTTTCTTCAAACATGTTTCGTTAAGCTTTTTTCTTGAGCTGAGGGTCTATCAGAGACAACCTCTCTATCGCACAAAGGTAGGATGAGGTCTGCGTACATGTCACCTTCCCCAGACCTCACTCGTGGGATCATATTGGGTATGTTGTTGTTGTAGTTACCTATCTAATAAAGGCTTGTGCATTTACAGCTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAGGTACTGTTCTAAATATTCAGAACTTCGGATTATATTAGTTGGTGCTTTACCTTAATCATAGGAGGAAAAAAAAACTGTTCAAAAGGACAGTCTCCTACGAAAAAGGGAACGAGAGTGGACTCAAGGGTATCTAGATGAAGTTCCAGTTGACAATTACTCCCTTCATTTCAATTTGTTTGTCTTACATTCCTTTTCTAATCCGTATCAAGAAAAAATGTCTTCTTTTTTTTGCAACTCTTTGATTCCAACTTCCCACATAACATGTTTAAGACCATAAGATTAAAGGCCAATTTGGTACGTTCAAATCAAAACCAAACAAACAAGCTGAAATGGAGGAATACATAATAAGATAATGTTGTCTTCACAATCTCGGCATATACATAGGTTTCCCAAATATTTTGAAACCAAAAATTAGAATGTAGATGAAAGATGAACAACAAACCAAATCTGACTTTGTTATAAACTGTGATAGTAATGAAATTTGAATGTCCCTCTTCCCTCAAATATGCCTCTGCTGTATGTGGTTCAATCAAGTTCCAGTTTCTGGTTATTGAAACACTATTGCTTCGCGTTGGTGAAAAAATTCCTTTATTTCTTGACATGAAGGTTCTCAGGTTGATGAGTTGAAGTTCCGGAGTCTTGATTTTCATGAAGAGGTGAGCAAATACTATCGATTTGCTCTTTTCTTTTGGTAAAACTTTTTCGACTTCCCATCTTCTAAACCACCATACTTGTGCATCCAATATACTTCAGGACTGCCGTGGAGCACTTGTTAACTTCGGGAAGTAGCACTAATCTGCATATTTTGCTGATGATGCTATCCGCTTGTTAAATTTGGGATTGAAGATACAGCTCTGAAATGATTACTTACTCTAGCTCTCTCTTTTTCCCGAAGAACTTCTGGTGTAGCATAGTTTTCGATAAATTATTTTTTCTTGTGCTTCTGTCATCTCAGCTGAT</genome_strand>
        <mrna_strand>TGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTGAATCTAAAGAGGAATGTTTGAGATTTGCTG...................................................................................................................................................................................................................................................CTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTCAAGTTGATGAGTTGAAGTTCCGGAGTCTTGATTTTCATGAAGAG.................................................................................................GACTGCCGTGGAGCACTTGTTAACTTCGGGAAGTAGCACTAATCTGCATATTTTGCTGATGATGCTATCCGCTTGTTAAATTTGGGATTGAAGATACAGCTCTGAAATGATTACTTACTCTAGCTCTCTCTTTTTCCCGAAGAACTTCTGGTGTAGCATAGTTTTCGATAAATTATTTTTTCTTGTGCTTCTGTCATCTCAGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413534" ref_strand="+" ref_description="SGN-E413534 [STM-18-E13]">
      <seq>gatacaacaggagctggtgacacttttacagctgcttttgcagtggccctagtggagggtaaatctaaagaggaatgtttgagatttgctgctgcagcagcttctctatgtgttcaagtgaagggagccattccaagcatgcccgagaagagagcagtgttcaatcttcttcagtcagcttgaagactcggagtttcctttatcatctccttgtacaaaaaagtaagaggtagtcttctaaatgtttagaacttcggattatattagttggtgctttaccctaatcataggagaaaaaaaaaagactgttcaaaaagacagtctcctaggaagaattaaacgagaggggacacagggggatctagatgaagttccagttgacaattactcctccgttttaatttgtttgtcttactttccttttccgtttcaaaaaaatgtctctttttttttttttggcaactctacgattctaactttccacataacacgttttaaggccacaagattaaaggaataaataataagataatgttgtcttcacaatctcggcatatacatcggttgtccaaataatttgaaaccgaaaattagaatttagatgaaagatgaacaacaaaccaaatctgactgtgttataaactgtgatagtaatgaaatttgaatatccctcttccctcatgtatgcctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="55338" stop="53753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55038" g_stop="54948" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54704" g_stop="54282" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="514" r_length="423" r_score="0.865"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54281" i_stop="54232" i_length="50">
            <donor d_prob="0.000" d_score="0.82"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54231" g_stop="54053" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="693" r_length="179" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E413534" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55038" e_stop="54948"/>
          <exon e_start="54704" e_stop="54282"/>
          <exon e_start="54231" e_stop="54053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTGGTAAGCATGCTGGTGCTTTCTCCCAATTTTGGTTTCAGCTTCATTAGTCTTATATTTTTTCTTCAAACATGTTTCGTTAAGCTTTTTTCTTGAGCTGAGGGTCTATCAGAGACAACCTCTCTATCGCACAAAGGTAGGATGAGGTCTGCGTACATGTCACCTTCCCCAGACCTCACTCGTGGGATCATATTGGGTATGTTGTTGTTGTAGTTACCTATCTAATAAAGGCTTGTGCATTTACAGCTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAGGTACTGTTCTAAATATTCAGAACTTCGGATTATATTAGTTGGTGCTTTACCTTAATCATAGGAG-GAAAAAAAA-ACTGTTCAAAAGGACAGTCTCCTACGAAAAAGGGAACGAGAGTGGACTCAAGGGTATCTAGATGAAGTTCCAGTTGACAATTACTCCCTTCATTTCAATTTGTTTGTCTTACATTCCTTTTCTAATCCGTATCAAGAAAAAATGTC--TTCTTTTTTTT-GCAACTCTTTGATTCCAACTTCCCACATAACATG-TTTAAGACCATAAGATTAAAGGCCAATTTGGTACGTTCAAATCAAAACCAAACAAACAAGCTGAAATGGAGGAATACATAATAAGATAATGTTGTCTTCACAATCTCGGCATATACATAGGTTTCCCAAATATTTTGAAACCAAAAATTAGAATGTAGATGAAAGATGAACAACAAACCAAATCTGACTTTGTTATAAACTGTGATAGTAATGAAATTTGAATGTCCCTCTTCCCTCAAATATGCCTCTG</genome_strand>
        <mrna_strand>GATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG...................................................................................................................................................................................................................................................CTGCAGCAGCTTCTCTATGTGTTCAAGTGAAGGGAGCCATTCCAAGCATGCCCGAGAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTCGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAGTAAGAGGTAGTCTTCTAAATGTTTAGAACTTCGGATTATATTAGTTGGTGCTTTACCCTAATCATAGGAGAAAAAAAAAAGACTGTTCAAAAAGACAGTCTCCTAGGAAGAATTAAACGAGAGGGGACACAGGGGGATCTAGATGAAGTTCCAGTTGACAATTACT-CCTCCGTTTTAATTTGTTTGTCTTACTTTCC--TT-T--TCCGTTTCAAAAAAATGTCTCTTTTTTTTTTTTTGGCAACTCTACGATTCTAACTTTCCACATAACACGTTTTAAGGCCACAAGATTAAAG..................................................GAATAAATAATAAGATAATGTTGTCTTCACAATCTCGGCATATACATCGGTTGTCCAAATAATTTGAAACCGAAAATTAGAATTTAGATGAAAGATGAACAACAAACCAAATCTGACTGTGTTATAAACTGTGATAGTAATGAAATTTGAATATCCCTCTTCCCTCATGTATGCCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413466" ref_strand="+" ref_description="SGN-E413466 [STM-17-P2]">
      <seq>gatacaacaggagctggtgacacttttacagctgcttttgcagtggccctagtggagggtaaatctaaagaggaatgtttgagatttgctgctgcagcagcttctctatgtgttcaagtgaagggagccattccaagcatgcccgagaagagagcagtgttcaatcttcttcagtcagcttgaagactcggagtttcctttatcatctccttgtacaaaaaagtaagaggtagtcttctaaatgtttagaacttcggattatattagttggtgctttaccctaatcataggagaaaaaaaaaagactgttcaaaaagacagtctcctaggaagaattaaacgagaggggacacagggggatctagatgaagttccagttgacaattactcctccgttntaatttgtttgtcttactttccttttccgtttcaaaaaaatgtctctttttttttttttggcaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="55338" stop="54072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55038" g_stop="54948" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54704" g_stop="54372" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="425" r_length="334" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E413466" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55038" e_stop="54948"/>
          <exon e_start="54704" e_stop="54372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTGGTAAGCATGCTGGTGCTTTCTCCCAATTTTGGTTTCAGCTTCATTAGTCTTATATTTTTTCTTCAAACATGTTTCGTTAAGCTTTTTTCTTGAGCTGAGGGTCTATCAGAGACAACCTCTCTATCGCACAAAGGTAGGATGAGGTCTGCGTACATGTCACCTTCCCCAGACCTCACTCGTGGGATCATATTGGGTATGTTGTTGTTGTAGTTACCTATCTAATAAAGGCTTGTGCATTTACAGCTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAGGTACTGTTCTAAATATTCAGAACTTCGGATTATATTAGTTGGTGCTTTACCTTAATCATAGGAG-GAAAAAAAA-ACTGTTCAAAAGGACAGTCTCCTACGAAAAAGGGAACGAGAGTGGACTCAAGGGTATCTAGATGAAGTTCCAGTTGACAATTACTCCCTTCATTTCAATTTGTTTGTCTTACATTCCTTTTC</genome_strand>
        <mrna_strand>GATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG...................................................................................................................................................................................................................................................CTGCAGCAGCTTCTCTATGTGTTCAAGTGAAGGGAGCCATTCCAAGCATGCCCGAGAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTCGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAGTAAGAGGTAGTCTTCTAAATGTTTAGAACTTCGGATTATATTAGTTGGTGCTTTACCCTAATCATAGGAGAAAAAAAAAAGACTGTTCAAAAAGACAGTCTCCTAGGAAGAATTAAACGAGAGGGGACACAGGGGGATCTAGATGAAGTTCCAGTTGACAATTACT-CCTCCGTTNTAATTTGTTTGTCTTACTTTCCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472337" ref_strand="+" ref_description="SGN-E472337 [cSTB-28-I20]">
      <seq>gatacaacaggagctggtgacacttttacagctgcttttgcagtggccctagtggagggtaaatctaaagaggaatgtttgagatttgctgctgcagcagcttctctatgtgttcaagtgaagggagccattccaagcatgcccgagaagagagcagtgttcaatcttcttcagtcagcttgaagactcggagtttcctttatcatctccttgtacaaaaaagtaagaggtagtcttctaaatgtttagaacttcggattatattagttggtgctttaccctaatcataggagaaaaaaaaaagactgttcaaaaagacagtctcctaggaagaattaaacgagaggggacacagggggatctagatgaagttccagttgacaattactcctccgttttaatttgtttgtcttactttccttttccgtttcaaaaaaatgtctctttttttttttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="55338" stop="54072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55038" g_stop="54948" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54704" g_stop="54372" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="425" r_length="334" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E472337" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55038" e_stop="54948"/>
          <exon e_start="54704" e_stop="54372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTGGTAAGCATGCTGGTGCTTTCTCCCAATTTTGGTTTCAGCTTCATTAGTCTTATATTTTTTCTTCAAACATGTTTCGTTAAGCTTTTTTCTTGAGCTGAGGGTCTATCAGAGACAACCTCTCTATCGCACAAAGGTAGGATGAGGTCTGCGTACATGTCACCTTCCCCAGACCTCACTCGTGGGATCATATTGGGTATGTTGTTGTTGTAGTTACCTATCTAATAAAGGCTTGTGCATTTACAGCTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAGGTACTGTTCTAAATATTCAGAACTTCGGATTATATTAGTTGGTGCTTTACCTTAATCATAGGAG-GAAAAAAAA-ACTGTTCAAAAGGACAGTCTCCTACGAAAAAGGGAACGAGAGTGGACTCAAGGGTATCTAGATGAAGTTCCAGTTGACAATTACTCCCTTCATTTCAATTTGTTTGTCTTACATTCCTTTTC</genome_strand>
        <mrna_strand>GATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG...................................................................................................................................................................................................................................................CTGCAGCAGCTTCTCTATGTGTTCAAGTGAAGGGAGCCATTCCAAGCATGCCCGAGAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTCGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAGTAAGAGGTAGTCTTCTAAATGTTTAGAACTTCGGATTATATTAGTTGGTGCTTTACCCTAATCATAGGAGAAAAAAAAAAGACTGTTCAAAAAGACAGTCTCCTAGGAAGAATTAAACGAGAGGGGACACAGGGGGATCTAGATGAAGTTCCAGTTGACAATTACT-CCTCCGTTTTAATTTGTTTGTCTTACTTTCCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324366" ref_strand="+" ref_description="SGN-E324366 [cTOC-6-B19]">
      <seq>tattctagatgctggtggagcagactctccaatccctctagaacttcttcgttgtggggagattttcagcccgaatgaaactgagctggctagaataacaaaaatgccaactggaaatttcgaacaaatcagcaatgcagtggaacagtgctatgacatgggagttaaccaggtccttgttaagcttggggccaatggatctgctcttttcaccaaaggagaggaacccttgcggcaacccattattaaagctgcaaaagtcattgatacaacaggagctggtgacacttttacagctgcttttgcagtggccctagtggagggtaaatctaaagaggaatgtttgagatttgctgctgcagccgcttctctatgtgttcaagtgaaaggagccattccaagcatgcctgaaaagagagcagtgttcaatcttcttcagtcagcttgaagacttggagtttcctttatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="56074" stop="54291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55774" g_stop="55615" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55614" i_stop="55144" i_length="471">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55143" g_stop="54948" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="356" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54704" g_stop="54591" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="470" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E324366" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55774" e_stop="55615"/>
          <exon e_start="55143" e_stop="54948"/>
          <exon e_start="54704" e_stop="54591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCTAGATGCTGGTGGAGCAGACTCTCCAATCCCTCTAGAACTTCTTCGTTGTGTTGAGATTTTCAGCCCGAATGAAACTGAGCTGGCTAGAATAACAAAAATGCCAACTGGAAATTTCGAACAAATCAGCAATGCAGTGGAACAGTGCTATGACATGGTCTGTTTTTCACGTACCTGTTTATTCATTTTTTCTAAAGTTTGCATCCTAAATTCAGGACATATGCTTGCAGCATTTCACTTGATTTAGACTGTATCCGTGACCCAAAATAACTATCTGAGTTACATTTTCGGGTTCTGAGTCTAAAAGTCCCTTTTGATTTGTTATAGTTACCTGCCCTATTGATTTTGCAAAATGTAGTGGTCCTGACAGACTTTTGCTTGGTGAGTCATAAATGTCTGGTGATGGCTTTGCTTCTCCATATAAATATGATGGATTAATGCAGTGTTGTTTGTGGGGCTCTGGTTTGGTCCACCGACCTAGTAGGACATTCCTAGTTAGATTTAGCTACTTTTCCTGATTTCTTGCTCAATGTTTGGGGTGTCACAAATTACAATAGATATCTGTAAATTTGTCACTATATCAATTTGATTTTGTGGAATGATGTTTCCACGCTCTTTTGTTTCCCAGGGAGTTAACCAGGTCCTTGTTAAGCTTGGGGCCAATGGATCTGCTCTTTTCACCAAAGGAGAGGAACCCTTGCGGCAACCCATTATTAAAGCTGCAAAAGTCATTGATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTGGTAAGCATGCTGGTGCTTTCTCCCAATTTTGGTTTCAGCTTCATTAGTCTTATATTTTTTCTTCAAACATGTTTCGTTAAGCTTTTTTCTTGAGCTGAGGGTCTATCAGAGACAACCTCTCTATCGCACAAAGGTAGGATGAGGTCTGCGTACATGTCACCTTCCCCAGACCTCACTCGTGGGATCATATTGGGTATGTTGTTGTTGTAGTTACCTATCTAATAAAGGCTTGTGCATTTACAGCTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCA</genome_strand>
        <mrna_strand>TATTCTAGATGCTGGTGGAGCAGACTCTCCAATCCCTCTAGAACTTCTTCGTTGTGGGGAGATTTTCAGCCCGAATGAAACTGAGCTGGCTAGAATAACAAAAATGCCAACTGGAAATTTCGAACAAATCAGCAATGCAGTGGAACAGTGCTATGACATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTAACCAGGTCCTTGTTAAGCTTGGGGCCAATGGATCTGCTCTTTTCACCAAAGGAGAGGAACCCTTGCGGCAACCCATTATTAAAGCTGCAAAAGTCATTGATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG...................................................................................................................................................................................................................................................CTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352063" ref_strand="+" ref_description="SGN-E352063 [cTOS-13-N11]">
      <seq>ggaaggtgacatgtacgcagacctcatcctacctttgtgcgatagagaggttgtctctgatagaccctcagctcaagaaaaaagcttaacgaaacatgtttgaagaaaaaatataagactaatgaagctgaaaccaaaattgggagaaagcaccagcatgcttaccagcaaatctcaaacattcctctttagatttaccctccactagggccactgcaaaagcagctgtaaaagtgtcaccagctcctgttgtatcaatgacttttgcagctttaataatgggttgccgcaagggttcctctcctttggtgaaaagagcagatccattggccccaagcttaacaaggacctggttaactccctgggaaacaaaagagcgtggaaacatcattccacaaaatcaaattgatatagtgacaaatttacagatatctattgtaatttgtgacaccccaaacattgagcaagaaatcaggaaaagtagctaaatctaactaggaatgtcctactaggtcggtggaccaaaccagagccccacaaacaacactgcattaatccatcatatttatatggagaagcaaagccatcaccagacatttatgactcaccaagcaaaagtctgtcaggaccactacattttgcaaaatcaatagggcaggtaactataacaaatncaaagggacttttagactcagaacccgaaaatgtaactcagatagttattttgggtcacggatacagtctaaatcaagtgaaatggctgcagcatatgtcctgaattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="54483" stop="55865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54783" g_stop="55565" g_length="783"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="783" r_length="783" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E352063" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54783" e_stop="55565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGGTGACATGTACGCAGACCTCATCCTACCTTTGTGCGATAGAGAGGTTGTCTCTGATAGACCCTCAGCTCAAGAAAAAAGCTTAACGAAACATGTTTGAAGAAAAAATATAAGACTAATGAAGCTGAAACCAAAATTGGGAGAAAGCACCAGCATGCTTACCAGCAAATCTCAAACATTCCTCTTTAGATTTACCCTCCACTAGGGCCACTGCAAAAGCAGCTGTAAAAGTGTCACCAGCTCCTGTTGTATCAATGACTTTTGCAGCTTTAATAATGGGTTGCCGCAAGGGTTCCTCTCCTTTGGTGAAAAGAGCAGATCCATTGGCCCCAAGCTTAACAAGGACCTGGTTAACTCCCTGGGAAACAAAAGAGCGTGGAAACATCATTCCACAAAATCAAATTGATATAGTGACAAATTTACAGATATCTATTGTAATTTGTGACACCCCAAACATTGAGCAAGAAATCAGGAAAAGTAGCTAAATCTAACTAGGAATGTCCTACTAGGTCGGTGGACCAAACCAGAGCCCCACAAACAACACTGCATTAATCCATCATATTTATATGGAGAAGCAAAGCCATCACCAGACATTTATGACTCACCAAGCAAAAGTCTGTCAGGACCACTACATTTTGCAAAATCAATAGGGCAGGTAACTATAACAAATCAAAAGGGACTTTTAGACTCAGAACCCGAAAATGTAACTCAGATAGTTATTTTGGGTCACGGATACAGTCTAAATCAAGTGAAAT-GCTGCAAGCATATGTCCTGAATTTA</genome_strand>
        <mrna_strand>GGAAGGTGACATGTACGCAGACCTCATCCTACCTTTGTGCGATAGAGAGGTTGTCTCTGATAGACCCTCAGCTCAAGAAAAAAGCTTAACGAAACATGTTTGAAGAAAAAATATAAGACTAATGAAGCTGAAACCAAAATTGGGAGAAAGCACCAGCATGCTTACCAGCAAATCTCAAACATTCCTCTTTAGATTTACCCTCCACTAGGGCCACTGCAAAAGCAGCTGTAAAAGTGTCACCAGCTCCTGTTGTATCAATGACTTTTGCAGCTTTAATAATGGGTTGCCGCAAGGGTTCCTCTCCTTTGGTGAAAAGAGCAGATCCATTGGCCCCAAGCTTAACAAGGACCTGGTTAACTCCCTGGGAAACAAAAGAGCGTGGAAACATCATTCCACAAAATCAAATTGATATAGTGACAAATTTACAGATATCTATTGTAATTTGTGACACCCCAAACATTGAGCAAGAAATCAGGAAAAGTAGCTAAATCTAACTAGGAATGTCCTACTAGGTCGGTGGACCAAACCAGAGCCCCACAAACAACACTGCATTAATCCATCATATTTATATGGAGAAGCAAAGCCATCACCAGACATTTATGACTCACCAAGCAAAAGTCTGTCAGGACCACTACATTTTGCAAAATCAATAGGGCAGGTAACTATAACAAATNCAAAGGGACTTTTAGACTCAGAACCCGAAAATGTAACTCAGATAGTTATTTTGGGTCACGGATACAGTCTAAATCAAGTGAAATGGCTGC-AGCATATGTCCTGAATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354847" ref_strand="+" ref_description="SGN-E354847 [cTOS-19-N13]">
      <seq>ggaaggtgacatgtacgcagacctcatcctacctttgtgcgatagagaggttgtctctgatagaccctcagctcaagaaaaaagcttaacgaaacatgtttgaagaaaaaatataagactaatgaagctgaaaccaaaattgggagaaagcaccagcatgcttaccagcaaatctcaaacattcctctttagatttaccctccactagggccactgcaaaagcagctgtaaaagtgtcaccagctcctgttgtatcaatgacttttgcagctttaataatgggttgccgcaagggttcctctcctttggtgaaaagagcagatccattggccccaagcttaacaaggacctggttaactccctgggaaacaaaagagcgtggaaacatcattccacaaaatcaaattgatatagtgacaaatttacagatatctattgtaatttgtgacaccccaaacattgagcaagaaatcaggaaaagtagctaaatctaactaggaatgtcctactaggtcggtggaccaaaccagagccccacaaacaacactgcattaatccatcatatttatatggagaagcaaagccatcaccagacatttatgactcaccaagcaaaagtctgtcaggaccactacattttgcaaaatcaatagggcaggtaactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="54483" stop="55748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54783" g_stop="55448" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E354847" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54783" e_stop="55448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGGTGACATGTACGCAGACCTCATCCTACCTTTGTGCGATAGAGAGGTTGTCTCTGATAGACCCTCAGCTCAAGAAAAAAGCTTAACGAAACATGTTTGAAGAAAAAATATAAGACTAATGAAGCTGAAACCAAAATTGGGAGAAAGCACCAGCATGCTTACCAGCAAATCTCAAACATTCCTCTTTAGATTTACCCTCCACTAGGGCCACTGCAAAAGCAGCTGTAAAAGTGTCACCAGCTCCTGTTGTATCAATGACTTTTGCAGCTTTAATAATGGGTTGCCGCAAGGGTTCCTCTCCTTTGGTGAAAAGAGCAGATCCATTGGCCCCAAGCTTAACAAGGACCTGGTTAACTCCCTGGGAAACAAAAGAGCGTGGAAACATCATTCCACAAAATCAAATTGATATAGTGACAAATTTACAGATATCTATTGTAATTTGTGACACCCCAAACATTGAGCAAGAAATCAGGAAAAGTAGCTAAATCTAACTAGGAATGTCCTACTAGGTCGGTGGACCAAACCAGAGCCCCACAAACAACACTGCATTAATCCATCATATTTATATGGAGAAGCAAAGCCATCACCAGACATTTATGACTCACCAAGCAAAAGTCTGTCAGGACCACTACATTTTGCAAAATCAATAGGGCAGGTAACTAT</genome_strand>
        <mrna_strand>GGAAGGTGACATGTACGCAGACCTCATCCTACCTTTGTGCGATAGAGAGGTTGTCTCTGATAGACCCTCAGCTCAAGAAAAAAGCTTAACGAAACATGTTTGAAGAAAAAATATAAGACTAATGAAGCTGAAACCAAAATTGGGAGAAAGCACCAGCATGCTTACCAGCAAATCTCAAACATTCCTCTTTAGATTTACCCTCCACTAGGGCCACTGCAAAAGCAGCTGTAAAAGTGTCACCAGCTCCTGTTGTATCAATGACTTTTGCAGCTTTAATAATGGGTTGCCGCAAGGGTTCCTCTCCTTTGGTGAAAAGAGCAGATCCATTGGCCCCAAGCTTAACAAGGACCTGGTTAACTCCCTGGGAAACAAAAGAGCGTGGAAACATCATTCCACAAAATCAAATTGATATAGTGACAAATTTACAGATATCTATTGTAATTTGTGACACCCCAAACATTGAGCAAGAAATCAGGAAAAGTAGCTAAATCTAACTAGGAATGTCCTACTAGGTCGGTGGACCAAACCAGAGCCCCACAAACAACACTGCATTAATCCATCATATTTATATGGAGAAGCAAAGCCATCACCAGACATTTATGACTCACCAAGCAAAAGTCTGTCAGGACCACTACATTTTGCAAAATCAATAGGGCAGGTAACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464528" ref_strand="+" ref_description="SGN-E464528 [cPRO-18-C18]">
      <seq>tgaagaagaagaagaaaagagggatagtgtagaaaacatgaaaggtctaacaacacctttacaatcaaagtattggcacccaacatccctaaacaacctcaaaaacccagaaagtttcaatctttacagtcacccagttcaatttaatggcaaaaacaaccccatatcaagaaaagtgaaacccatctcttgttttgcttcagagaacacaaatcaaccaatcttgaaagaatcaaagcctccattggttgtagttggatcagctaatgcagatatctatgtggagattgataggttaccaaaagaaggggaaacaatttcagccaaaacaggtcaaacattggctggtggaaaaggggctaatcaagctgtttgtggtggaaagcttgattatccaactttttttgttggtcaagttggtgaagatgctcatgggaaattgattactgaagctttagagagtggtggagtttgtgtggatcaccttactactgtttctaatgctccaactggaaatgctgtggtgatgcttcagtctgatggggagaattcgattattattgttggtggtgcaaacatgtcttgttggcctgatgaattgtcatatgaggatttggagattgtgagaagtgcagggattgtgttgctccagagggaaattccagattttgttaacatccaagttgcaaaggctgccaggaatgcaggtgttccagttattctagatgctggtggagcggattctccatccctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="58156" stop="55436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57863" g_stop="57170" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="691" r_length="691" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57169" i_stop="55801" i_length="1369">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55800" g_stop="55736" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="755" r_length="64" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E464528" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57863" e_stop="57170"/>
          <exon e_start="55800" e_stop="55736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTTGAAGAAGAAAAGAGGGATACTGTAGAAAACATGAAAGGTCTAGCAACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAAAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAGGTTTGAGCTTTTTGGTTATATTTTTGATTTTTCGATAGCTATATTCGTCTAAGCGAAATTCAATTTGTGTGTGGATTTGTTTAACTTAGAATCGAATATGTTAGGGTTGGTAGTCCTCATTGGTTGGGGAATGGAATGATGGTTTGCTAATACGTAGTTTGACAATGCCAGTCGGGTGCTATAGCTTTACATGGTATCAAGTTAGGCCCAGTGTAAAGACCGATACCAAAATTGGGAAACCCGGTCCACGTTTCAACCTGGCCTGGATGTGAATGGGGTGTTAGAATGTGTTACAACCCCACATTGGTTGGTGAACGGACGGATGGTTTGCTTATATGGACCTGGGCAGTACTCCCTCAAGAGCTTGCTTTTGGGGTTGAGTTAGGCACACATGTCATATCTTAACAATATTTATATTTTCTCATTGTTCCAGTATTTCTTTTAAGCTATCTTGTTTTTATGTTTTTGCTGAAACTAAGGACTTAGGTTTCTCCTTTTGAGGAACTGTTATCATACGTAAGTAAAGAAAGGTATTAGATTATATTAAGTTATTAAGTAAAGTGTGAAGCAGTACAAAGAGCATCGTGCTGGCTTGGTCCAGCATCATTGCAGTAGTTACTTACAGTAGTAGTGATTAAGGGGCGATCAATTAGGGAGTTGTTACTGTAAGAAGCAGAGACATGGACCCTATACAAAAATATGCTTCTAAGAGGTACTCGAGTGAGTCACTAGTGTACTATTAGGGGATCCTGAGATGTCTTCCGCTAGTATACTAAGCGTAAAAGGAGATGGCGATGCAAAAAAAAAGAAGGTAGATCATAATAATGTATTTTCCCCACCCTCCTTTTTCTTGTGGTAAATTAAAATTCGCCTTGGATATCTTTTCTAATGTATACTTGGATGATTAAGGTCACTGTCAGATCAGCTTACCCAGTCGTAATTGTGAGTTTCGCGCTCTGAGAAGGAAAATGCCTTATTTTACATAAAATTGGAGAGAACTTACTTTCATTGATTTTTCTGACTTTCTTTTCATTTTTTGACATTCCAAAATACCATTCCATTGATGTATTACTTACTTTATACTACACGAATCCAAACTCATTAGCTGTTTGAATCTCAATCTGTGGTGGTGATATTTTCTCTATCAGACTAACTTTCCAAAAACAGTTTTAATATTTCTTCCACTACTAAAATAATACACAAGGCAATTACTATCTTGAGCTTCATGTCTAATCAATCATTTTCGTTTATTGAAATGAAGGAAGTATATTTGTGTGTGTGTTTTCATGAGTGTGTGTGTCCCACATGTGTCATGAAGATGTCAAGTGTCTTTGGCTGATTGCTTCTTTAAACATCTTGGTATCTTCAGGCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGAGCAGACTCTCCAATCCCTCT</genome_strand>
        <mrna_strand>TGAAGAAGAAGAAGAAAAGAGGGATAGTGTAGAAAACATGAAAGGTCTAACAACACCTTTACAATCAAAGTATTGGCACCCAACATCCCTAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGC--AAA-AACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACACAAATCAACCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCCAAAACAGGTCAAACATTGGCTGGTGGAAAAGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTGTTGGTCAAGTTGGTGAAGATGCTCATGGGAAATTGATTACTGAAGCTTTAGAGAGTGGTGGAGTTTGTGTGGATCACCTTACTACTGTTTCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCGATTATTATTGTTGGTGGTGCAAACATGTCTTGTTGGCCTGATGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAGAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGAGCGGATTCTCC-ATCCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413631" ref_strand="+" ref_description="SGN-E413631 [STM-18-O5]">
      <seq>aacacctttacaatcaaagtattggcacccaacatccctaaacaacctcaaaaacccagaaagtttcaatctttacagtcacccagttcaatttaatggcaaaaacaaccccatatcaagaaaagtgaaacccatctcttgttttgcttcagagaacacaaatcaaccaatcttgaaagaatcaaagcctccattggttgtagttggatcagctaatgcagatatctatgtggagattgataggttaccaaaagaaggggaaacaatttcagccaaaacaggtcaaacattggctggtggaaaaggggctaatcaagctgtttgtggtggaaagcttgattatccaactttttttgttggtcaagttggtgaagatgctcatgggaaattgattactgaagctttagagagtggtggagtttgtgtggatcaccttactactgtttctaatgctccaactggaaatgctgtggtgatgcttcagtctgatggggagaattcgattattattgttggtggtgcaaacatgtcttgttggcctgatgaattgtcatatgaggatttggagattgtgagaagtgcagggattgtgttgctccagagggaaattccagattttgttaacatccaagttgcaaaggctgccaggaatgcangtgttccagttattctagatgctggtggagcggattctccaatccctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="58112" stop="55436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57812" g_stop="57170" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57169" i_stop="55801" i_length="1369">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55800" g_stop="55736" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="705" r_length="65" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E413631" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57812" e_stop="57170"/>
          <exon e_start="55800" e_stop="55736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAAAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAGGTTTGAGCTTTTTGGTTATATTTTTGATTTTTCGATAGCTATATTCGTCTAAGCGAAATTCAATTTGTGTGTGGATTTGTTTAACTTAGAATCGAATATGTTAGGGTTGGTAGTCCTCATTGGTTGGGGAATGGAATGATGGTTTGCTAATACGTAGTTTGACAATGCCAGTCGGGTGCTATAGCTTTACATGGTATCAAGTTAGGCCCAGTGTAAAGACCGATACCAAAATTGGGAAACCCGGTCCACGTTTCAACCTGGCCTGGATGTGAATGGGGTGTTAGAATGTGTTACAACCCCACATTGGTTGGTGAACGGACGGATGGTTTGCTTATATGGACCTGGGCAGTACTCCCTCAAGAGCTTGCTTTTGGGGTTGAGTTAGGCACACATGTCATATCTTAACAATATTTATATTTTCTCATTGTTCCAGTATTTCTTTTAAGCTATCTTGTTTTTATGTTTTTGCTGAAACTAAGGACTTAGGTTTCTCCTTTTGAGGAACTGTTATCATACGTAAGTAAAGAAAGGTATTAGATTATATTAAGTTATTAAGTAAAGTGTGAAGCAGTACAAAGAGCATCGTGCTGGCTTGGTCCAGCATCATTGCAGTAGTTACTTACAGTAGTAGTGATTAAGGGGCGATCAATTAGGGAGTTGTTACTGTAAGAAGCAGAGACATGGACCCTATACAAAAATATGCTTCTAAGAGGTACTCGAGTGAGTCACTAGTGTACTATTAGGGGATCCTGAGATGTCTTCCGCTAGTATACTAAGCGTAAAAGGAGATGGCGATGCAAAAAAAAAGAAGGTAGATCATAATAATGTATTTTCCCCACCCTCCTTTTTCTTGTGGTAAATTAAAATTCGCCTTGGATATCTTTTCTAATGTATACTTGGATGATTAAGGTCACTGTCAGATCAGCTTACCCAGTCGTAATTGTGAGTTTCGCGCTCTGAGAAGGAAAATGCCTTATTTTACATAAAATTGGAGAGAACTTACTTTCATTGATTTTTCTGACTTTCTTTTCATTTTTTGACATTCCAAAATACCATTCCATTGATGTATTACTTACTTTATACTACACGAATCCAAACTCATTAGCTGTTTGAATCTCAATCTGTGGTGGTGATATTTTCTCTATCAGACTAACTTTCCAAAAACAGTTTTAATATTTCTTCCACTACTAAAATAATACACAAGGCAATTACTATCTTGAGCTTCATGTCTAATCAATCATTTTCGTTTATTGAAATGAAGGAAGTATATTTGTGTGTGTGTTTTCATGAGTGTGTGTGTCCCACATGTGTCATGAAGATGTCAAGTGTCTTTGGCTGATTGCTTCTTTAAACATCTTGGTATCTTCAGGCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGAGCAGACTCTCCAATCCCTCT</genome_strand>
        <mrna_strand>AACACCTTTACAATCAAAGTATTGGCACCCAACATCCCTAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGC--AAA-AACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACACAAATCAACCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCCAAAACAGGTCAAACATTGGCTGGTGGAAAAGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTGTTGGTCAAGTTGGTGAAGATGCTCATGGGAAATTGATTACTGAAGCTTTAGAGAGTGGTGGAGTTTGTGTGGATCACCTTACTACTGTTTCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCGATTATTATTGTTGGTGGTGCAAACATGTCTTGTTGGCCTGATGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAGAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCAGGAATGCANGTGTTCCAGTTATTCTAGATGCTGGTGGAGCGGATTCTCCAATCCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559791" ref_strand="+" ref_description="SGN-E559791 [19344]">
      <seq>taatgcagatatctatgtggagattgataggttaccaaaagaaggggaaacaatttcagccaaaacaggtcaaacattggctggtggaaaaggggctaatcaagctgtttgtggtggaaagcttgattatccaactttttttgttggtcaagttggtgaagatgctcatgggaaattgattactgaagctttagagagtggtggagtttgtgtggatcaccttactactgtttctaatgctccaactggaaatgctgtggtgatgcttcagtctgatggggagaattcgattattattgttggtggtgcaaacatgtcttgttggcctgatgaattgtcatatgaggatttggagattgtgagaagtgcagggattgtgttgctccagagggaaattccagattttgttaacatccaagttgcaaaggctgccaggaatgcaggtgttccagttattctagatgctggtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="57896" stop="55456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57596" g_stop="57170" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="427" r_length="427" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57169" i_stop="55801" i_length="1369">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55800" g_stop="55756" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="472" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E559791" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57596" e_stop="57170"/>
          <exon e_start="55800" e_stop="55756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAAAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAGGTTTGAGCTTTTTGGTTATATTTTTGATTTTTCGATAGCTATATTCGTCTAAGCGAAATTCAATTTGTGTGTGGATTTGTTTAACTTAGAATCGAATATGTTAGGGTTGGTAGTCCTCATTGGTTGGGGAATGGAATGATGGTTTGCTAATACGTAGTTTGACAATGCCAGTCGGGTGCTATAGCTTTACATGGTATCAAGTTAGGCCCAGTGTAAAGACCGATACCAAAATTGGGAAACCCGGTCCACGTTTCAACCTGGCCTGGATGTGAATGGGGTGTTAGAATGTGTTACAACCCCACATTGGTTGGTGAACGGACGGATGGTTTGCTTATATGGACCTGGGCAGTACTCCCTCAAGAGCTTGCTTTTGGGGTTGAGTTAGGCACACATGTCATATCTTAACAATATTTATATTTTCTCATTGTTCCAGTATTTCTTTTAAGCTATCTTGTTTTTATGTTTTTGCTGAAACTAAGGACTTAGGTTTCTCCTTTTGAGGAACTGTTATCATACGTAAGTAAAGAAAGGTATTAGATTATATTAAGTTATTAAGTAAAGTGTGAAGCAGTACAAAGAGCATCGTGCTGGCTTGGTCCAGCATCATTGCAGTAGTTACTTACAGTAGTAGTGATTAAGGGGCGATCAATTAGGGAGTTGTTACTGTAAGAAGCAGAGACATGGACCCTATACAAAAATATGCTTCTAAGAGGTACTCGAGTGAGTCACTAGTGTACTATTAGGGGATCCTGAGATGTCTTCCGCTAGTATACTAAGCGTAAAAGGAGATGGCGATGCAAAAAAAAAGAAGGTAGATCATAATAATGTATTTTCCCCACCCTCCTTTTTCTTGTGGTAAATTAAAATTCGCCTTGGATATCTTTTCTAATGTATACTTGGATGATTAAGGTCACTGTCAGATCAGCTTACCCAGTCGTAATTGTGAGTTTCGCGCTCTGAGAAGGAAAATGCCTTATTTTACATAAAATTGGAGAGAACTTACTTTCATTGATTTTTCTGACTTTCTTTTCATTTTTTGACATTCCAAAATACCATTCCATTGATGTATTACTTACTTTATACTACACGAATCCAAACTCATTAGCTGTTTGAATCTCAATCTGTGGTGGTGATATTTTCTCTATCAGACTAACTTTCCAAAAACAGTTTTAATATTTCTTCCACTACTAAAATAATACACAAGGCAATTACTATCTTGAGCTTCATGTCTAATCAATCATTTTCGTTTATTGAAATGAAGGAAGTATATTTGTGTGTGTGTTTTCATGAGTGTGTGTGTCCCACATGTGTCATGAAGATGTCAAGTGTCTTTGGCTGATTGCTTCTTTAAACATCTTGGTATCTTCAGGCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGA</genome_strand>
        <mrna_strand>TAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCCAAAACAGGTCAAACATTGGCTGGTGGAAAAGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTGTTGGTCAAGTTGGTGAAGATGCTCATGGGAAATTGATTACTGAAGCTTTAGAGAGTGGTGGAGTTTGTGTGGATCACCTTACTACTGTTTCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCGATTATTATTGTTGGTGGTGCAAACATGTCTTGTTGGCCTGATGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAGAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E281279" ref_strand="+" ref_description="SGN-E281279 [cLEL-1-G14](-)">
      <seq>tttgcaacttggatgttaacaaaatctggaatttccctttggagcaacacaatccctgcacttctcacaatctccaaatcctcatatgacaattcttcaggccagcaagacatgtttgcaccaccaacaataataattgaattctccccatcagactgaagcatcaccacagcatttccagttggagcattagcaacagtagtaaggtgatccacacaaaccccaccactctctaaagcttcagtaatcaatctcccatgagcatcttcaccaacttgaccaataaaaaaagttggataatcaagctgtccaccacaaacagcttgattagccccctttccaccagccaatgtttgacctgttttagctgaaattgtctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="56871" stop="57850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57171" g_stop="57554" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E281279" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57171" e_stop="57554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCAACTTGGATGTTAACAAAATCTGGAATTTCCCTTTGGAGCAACACAATCCCTGCACTTCTCACAATCTCCAAATCCTCATATGACAATTCTTCAGGCCAGCAAGACATGTTTGCACCACCAACAATAATAATTGAATTCTCCCCATCAGACTGAAGCATCACCACAGCATTTCCAGTTGGAGCATTAGCAACAGTAGTAAGGTGATCCACACAAACCCCACCACTCTCTAAAGCTTCAGTAATCAATCTCCCATGAGCATCTTCACCAACTTGACCAATAAAAAAAGTTGGATAATCAAGCTTTCCACCACAAACAGCTTGATTAGCCCCCTTTCCACCAGCCAATGTTTGACCTGTTTTAGCTGAAATTGTTTCCCCT</genome_strand>
        <mrna_strand>TTTGCAACTTGGATGTTAACAAAATCTGGAATTTCCCTTTGGAGCAACACAATCCCTGCACTTCTCACAATCTCCAAATCCTCATATGACAATTCTTCAGGCCAGCAAGACATGTTTGCACCACCAACAATAATAATTGAATTCTCCCCATCAGACTGAAGCATCACCACAGCATTTCCAGTTGGAGCATTAGCAACAGTAGTAAGGTGATCCACACAAACCCCACCACTCTCTAAAGCTTCAGTAATCAATCTCCCATGAGCATCTTCACCAACTTGACCAATAAAAAAAGTTGGATAATCAAGCTGTCCACCACAAACAGCTTGATTAGCCCCCTTTCCACCAGCCAATGTTTGACCTGTTTTAGCTGAAATTGTCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409064" ref_strand="+" ref_description="SGN-E409064 [PPI-13-C7]">
      <seq>aggtctaacaacacctttacaatcaaagtattggcacccaaccgcccaaaacaacctcaaaaacccagaaagtttcaatctttacagtcacccagttcaatttaatggcaaaaacaacagccccatatcaagaaaagtgaaacccatctcttgtttttcttcagagaacacaaatcaaccaatctcgaaagaatcaaagcctccattggttgtagttggatcagctaatgcagatatctatgtggagattgataggttaccaaaagaaggggaaacaatttcagccaaaacaggtcaaacattggctggtggaaaaggggctaatcaagctgtttgtggtggaaagcttgattatccaactttttttgttggtcaagttggtgaagatgctcatgggaaattgattactgaagctttagagagtggtggagtttgtgtggatcaccttactactgtttctaatgctccaactggaaatgctgtggtgatgcttcagtctgatggggagaattcgattattattgttggtggtgcaaacatgtcttgttggcctgaagaattgtcatatgaggatttggagattgtgagaagtgcagggattgtgttgctccagagggaaattccagattttgttaacatccaagttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="58121" stop="56874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57821" g_stop="57174" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E409064" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57821" e_stop="57174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCTAGCAACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAAAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGC</genome_strand>
        <mrna_strand>AGGTCTAACAACACCTTTACAATCAAAGTATTGGCACCCAACCGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAGCCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTTCTTCAGAGAACACAAATCAACCAATCTCGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCCAAAACAGGTCAAACATTGGCTGGTGGAAAAGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTGTTGGTCAAGTTGGTGAAGATGCTCATGGGAAATTGATTACTGAAGCTTTAGAGAGTGGTGGAGTTTGTGTGGATCACCTTACTACTGTTTCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCGATTATTATTGTTGGTGGTGCAAACATGTCTTGTTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAGAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452547" ref_strand="+" ref_description="SGN-E452547 [cSTS-17-M17]">
      <seq>aaacatgaaaggtctaacaacacctttacaatcaaagtattggcacccaaccgcccaaaacaacctcaaaaacccagaaagtttcaatctttacagtcacccagttcaatttaatggcaaaaacaacagccccatatcaagaaaagtgaaacccatctcttgtttttcttcagagaacacaaatcaaccaatctcgaaagaatcaaagcctccattggttgtagttggatcagctaatgcagatatctatgtggagattgataggttaccaaaagaaggggaaacaatttcagccaaaacaggtcaaacattggctggtggaaaaggggctaatcaagctgtttgtggtggaaagcttgattatccaactttttttgttggtcaagttggtgaagatgctcatgggaaattgattactgaagctttagagagtggtggagtttgtgtggatcaccttactactgtttctaatgctccaactggaaatgctgtggtgatgcttcagtctgatggggagaattcgattattattgttggtggtgcaaacatgtcttgttggcctgaagaattgtcatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="58130" stop="56953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57830" g_stop="57253" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E452547" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E452547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57830" e_stop="57253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACATGAAAGGTCTAGCAACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATG</genome_strand>
        <mrna_strand>AAACATGAAAGGTCTAACAACACCTTTACAATCAAAGTATTGGCACCCAACCGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAGCCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTTCTTCAGAGAACACAAATCAACCAATCTCGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCCAAAACAGGTCAAACATTGGCTGGTGGAAAAGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTGTTGGTCAAGTTGGTGAAGATGCTCATGGGAAATTGATTACTGAAGCTTTAGAGAGTGGTGGAGTTTGTGTGGATCACCTTACTACTGTTTCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCGATTATTATTGTTGGTGGTGCAAACATGTCTTGTTGGCCTGAAGAATTGTCATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472422" ref_strand="+" ref_description="SGN-E472422 [cSTB-28-N7]">
      <seq>aacacctttacaatcaaagtattggcacccaacatccctaaacaacctcaaaaacccagaaagtttcaatctttacagtcacccagttcaatttaatggcaaaaacaaccccatatcaagaaaagtgaaacccatctcttgttttgcttcagagaacacaaatcaaccaatcttgaaagaatcaaagcctccattggttgtagttggatcagctaatgcagatatctatgtggagattgataggttaccaaaagaaggggaaacaatttcagccaaaacaggtcaaacattggctggtggaaaaggggctaatcaagctgtttgtggtggaaagcttgattatccaactttttttgttggtcaagttggtgaagatgctcatgggaaattgattactgaagctttagagagtggtggagtttgtgtggatcaccttactactgtttctaatgctccaactggaaatgctgtggtgatgcttcagtctgatggggagaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="58112" stop="57011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57812" g_stop="57311" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E472422" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57812" e_stop="57311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAAT</genome_strand>
        <mrna_strand>AACACCTTTACAATCAAAGTATTGGCACCCAACATCCCTAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGC--AAA-AACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACACAAATCAACCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCCAAAACAGGTCAAACATTGGCTGGTGGAAAAGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTGTTGGTCAAGTTGGTGAAGATGCTCATGGGAAATTGATTACTGAAGCTTTAGAGAGTGGTGGAGTTTGTGTGGATCACCTTACTACTGTTTCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733952" ref_strand="+" ref_description="SGN-E733952 [LB11BE10]">
      <seq>catggcttctcgaaccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacagcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaagccaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaataatgttgcttctaaagtttcaatcgaactttgagagagtttcttctctgtgatgttgttaaagttcatatgttcacatatacataatatataagttggtcaaatgtactcatttttagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59574" stop="62981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59874" g_stop="60049" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="288" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="354" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="552" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62681" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="785" r_length="233" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E733952" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59874" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGCTTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCC</genome_strand>
        <mrna_strand>CATGGCTTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACAGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGCCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716580" ref_strand="+" ref_description="SGN-E716580 [FB17BH05]">
      <seq>ccgtcttctcgaaccatacaaatctcctctttcaactcaggattgaactttttatcgaaaccccaattgggattaaacagcaagccaacattttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccaatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaagccaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaataatgttgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59577" stop="62872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59875" g_stop="60049" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="288" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="354" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="552" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62572" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="676" r_length="124" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E716580" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59875" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCTTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAAC-TTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTC</genome_strand>
        <mrna_strand>CCGTCTTCTCGAACCATACAAATCTCCTCTTTCAACTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACAGCAAGCCAACATTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCAATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGCCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369545" ref_strand="+" ref_description="SGN-E369545 [TUS-25-D10]">
      <seq>ttctcgaaccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaataatgttgcttctaaagtttcaatcgaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59580" stop="62891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59880" g_stop="60049" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="282" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="348" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="546" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62591" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="689" r_length="143" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E369545" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59880" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTT</genome_strand>
        <mrna_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249702" ref_strand="+" ref_description="SGN-E249702 [cLEF-56-F14]">
      <seq>ttctcgaaccatacaaatctcctctttcagctcaagattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59580" stop="62672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59880" g_stop="60049" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="282" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="348" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="546" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62465" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="563" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E249702" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59880" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62465"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGA</genome_strand>
        <mrna_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAAGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274080" ref_strand="+" ref_description="SGN-E274080 [cLEN-8-J14]">
      <seq>ttctcgaaccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59580" stop="62621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59880" g_stop="60049" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="282" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="348" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62321" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="507" r_length="159" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E274080" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59880" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGA</genome_strand>
        <mrna_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246411" ref_strand="+" ref_description="SGN-E246411 [cLEF-52-C20]">
      <seq>ttctcgaaccataccaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59580" stop="62620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59880" g_stop="60049" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="283" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="349" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62320" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="507" r_length="158" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E246411" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59880" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCGAACCATA-CAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATG</genome_strand>
        <mrna_strand>TTCTCGAACCATACCAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247367" ref_strand="+" ref_description="SGN-E247367 [cLEF-46-M9]">
      <seq>ttctcgaaccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59580" stop="62359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59880" g_stop="60049" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="282" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62059" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="334" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E247367" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59880" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGAT</genome_strand>
        <mrna_strand>TTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211500" ref_strand="+" ref_description="SGN-E211500 [cLEC-67-P21]">
      <seq>tcgaaccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaataatgttgcttctaaagtttcaatcgaactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59583" stop="62893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59883" g_stop="60049" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="279" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="345" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="543" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62593" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="688" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E211500" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59883" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTG</genome_strand>
        <mrna_strand>TCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295918" ref_strand="+" ref_description="SGN-E295918 [cLET-27-B15]">
      <seq>cgaaccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59584" stop="62602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59884" g_stop="60049" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="278" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="344" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62302" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="484" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E295918" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59884" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATC</genome_strand>
        <mrna_strand>CGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273804" ref_strand="+" ref_description="SGN-E273804 [cLEN-7-F22]">
      <seq>accatacaaatctcctctttcagctcaagattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59587" stop="62672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59887" g_stop="60049" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="275" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="341" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="539" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62464" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="555" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E273804" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59887" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTG</genome_strand>
        <mrna_strand>ACCATACAAATCTCCTCTTTCAGCTCAAGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244830" ref_strand="+" ref_description="SGN-E244830 [cLEF-2-A6]">
      <seq>ccatacaaatctcctctttcagctcaggattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccaacccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59588" stop="62572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59888" g_stop="60049" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="274" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="340" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62272" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="450" r_length="110" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E244830" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59888" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAG</genome_strand>
        <mrna_strand>CCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAACCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358612" ref_strand="+" ref_description="SGN-E358612 [cLHT-22-C11]">
      <seq>ttcagctcaggattgaactttttatcaaaaccccaatggggattaaacagcaagccaacttttggaggattcaaaagcaaaatttcagcctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgatgaggagtggaagaagaagcttacaaatgaacaattttacattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttgtttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatatatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59605" stop="62672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59905" g_stop="60049" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="257" r_length="112" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="323" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="521" r_length="198" r_score="0.995"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.849" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62464" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="537" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E358612" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59905" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTG</genome_strand>
        <mrna_strand>TTCAGCTCAGGATTGAACTTTTTATCAAAACCCCAATGGGGATTAAACAGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGCCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGATGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTACATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTGTTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATATATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272710" ref_strand="+" ref_description="SGN-E272710 [cLEM-21-G18]">
      <seq>gattgaactttttatcgaaaccccaattgggattaaacggcaagccaacttttggaggattcaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtaaagctgtgctgtgtagaataccaaaagttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59615" stop="62854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59915" g_stop="60049" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="247" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="313" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="511" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62554" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="617" r_length="106" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E272710" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59915" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATG</genome_strand>
        <mrna_strand>GATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAAAGCTGTGCTGTGTAGAATACCAAAAGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369544" ref_strand="+" ref_description="SGN-E369544 [TUS-25-D10](-)">
      <seq>ccccaatgggattaaacggcaagccaacttttggaggatcaaaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaataatgttgcttctaaagtttcaatcgaactttgagagagtttcttctctgtgatgttgttaaagttcatatgttcacatatacataatatataagttggtcaaatgtactcatttttagcctactatacgtagatattttacctgttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59635" stop="63011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59935" g_stop="60049" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="226" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="292" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="490" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62704" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="746" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="750" polyA_stop="759"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E369544" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59935" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCT</genome_strand>
        <mrna_strand>CCCCAA-TGGGATTAAACGGCAAGCCAACTTTTGGAGGATCAAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412054" ref_strand="+" ref_description="SGN-E412054 [STM-15-N9]">
      <seq>gaatttttcatcaaaaccccaattgggatttaacagcaagccattgtcttgcctaacttttggaggaatcaaaaacagaatctcagtctcaattcgtgcaatgggctcctcagcttcttcttcgaaacccgatagtgctcaaggggccagtaaaatggattatagctctgtaagcgatgaggagtggaagaagaagttaacaaatgaacaattttacattacacggcaaaagggtacagagcgggcattcactggagagtactggaacagtaagacccctggaacatatcactgcatttgctgcgacactcctttatttgaatcttctaccaaatttgatagtggaaccgggtggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttttatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccacctactggaaagcgttactgcatcaatagcgcttccctgaaattgaagccaaagtagaaatgtgctgcgtagaataccaaaggttatcgatttcacgagaaattcaagatatcaagctgcagaattattcatatgcaggaataatgttgcttctaaagtttcaatcaaacttgagagtttcttctatgtgatgtgttaaagttcatatgttcacatatacataatatataagttggtcaaatgtactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59619" stop="62971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59959" g_stop="60049" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="143" r_length="91" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.962" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="255" r_length="112" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="321" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="519" r_length="198" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.849" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62671" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="738" r_length="219" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E412054" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59959" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTC</genome_strand>
        <mrna_strand>CTAACTTTTGGAGGAATCAAAAACAGAATCTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCGAAACCCGATAGTGCTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCAGTAAAATGGATTATAGCTCTGTAAGCGATGAGGAGTGGAAGAAGAAGTTAACAAATGAACAATTTTACATTACACGGCAAAAGGGTACAGAGCGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGACACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGGTGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTTTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCACCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGCCAAAGTAGAAATGTGCTGCGTAGAATACCAAAGGTTATCGATTTCACGAGAAATTCAAGATATCAAGCTGCAGAATTATTCATATGCAGGAATAATGTTGCTTCTAAAGTTTCAATCAAAC-TT--GAGAGTTTCTTCTATGTGATG-TGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253806" ref_strand="+" ref_description="SGN-E253806 [cLEG-28-G12]">
      <seq>aaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaataatgttgcttctaaagtttcaatcgaactttgagagagtttcttctctgtgatgttgttaaagttcatatgttcacatatacataatatataagttggtcaaatgtactcatttttagcctactatacgtagatattttacctgtttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59677" stop="63011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59977" g_stop="60049" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="185" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="251" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="449" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62708" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="709" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="710" polyA_stop="720"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E253806" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59977" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCTGTTT</genome_strand>
        <mrna_strand>AAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257169" ref_strand="+" ref_description="SGN-E257169 [cLEG-46-F13]">
      <seq>aaaagcaaaatttcagtctcaattcgtgcaatgggctcctcagcttcttcttccaaatccgatagtgttcaagggggcagtaaaatggattatagctctataagcgacgaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaagctgcagaattattcatatgcacgaaatatgttgcttctaaagtttcaatcgaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="59677" stop="62890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59977" g_stop="60049" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60794" g_stop="60905" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="185" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="251" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="449" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62449" g_stop="62590" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="591" r_length="142" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E257169" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59977" e_stop="60049"/>
          <exon e_start="60794" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAGGTCACCTTTTTCTCTCTTCTAGTATAATTTGTATGAATAGAGAATCACTTTTCCGTTTTTGTTTGAATGCTCCAATTTATTGCGTTTCAGACTCTGCTTGTCAGATTATACCGAATATGATGTTGTTGTGTTGTTAGTTTACAGGTTTTGGATTATAGAAACACATAACTCAGATATGTTACTTATATACATATTAAGTGGGTTTTTTTCAATATAATTACGGGTTTGAGCTAAAGCTATTGGGTTCTGTCAATGGTAGCTCAGCTTACATTGTAGTGAAAATTGGAATATGAAAGAAATTTAAAGGTTCAGTCTTTAGTTTTTACGTTCTGAGCTTGTTGTTTCTCTTATGAAATTTGTACAAAGTTGTTATGGAGATTGATAGAATTACGTGTATTCATGCTAGTGGGAAGTAGCAGCCACTGTTGTAGAATAATCAAGAACCATTATAAAAGAATTTTGGGTTATGTGCCTCTTGCGCAATCAATCACTTTGTGAGCTAGCTTTGGGGTTGAATTATGCCCAAAGGTCTGTATTCGTATCAGTGTGACAATGTACAAGTTGATTTTACAAAGATGTAAGAATAAGAAACTGCTGAGGCTGATTGTGTTTTTGAGCAATAGTCTCAAAATGGTTTGACATAAAAATAAGCTTTGGAAAGCATATTTGTCTATTCATCTTATGGGATGTTGCTGAAATAGTTAAAGCAGGGACCATACATAAAAAATGAACATCATTGTGCAGGGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACT</genome_strand>
        <mrna_strand>AAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAAATATGTTGCTTCTAAAGTTTCAATCGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253811" ref_strand="+" ref_description="SGN-E253811 [cLEG-28-I12]">
      <seq>tcattatacctatataggcgacaaggagtggaagaagaagcttacaaatgaacaattttatattacacggcaaaagggtacagaacgggcattcactggggagtactggaacagtaagacccctggaacatgtggactgaatagctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggtcatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggcaaagtagagctgtgctgtgtagaataccaaaggttattgattcctcaagaaatgcaagatatcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="60509" stop="62835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60807" g_stop="60905" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62008" g_stop="62073" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="165" r_length="66" r_score="0.894"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="363" r_length="198" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62449" g_stop="62535" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="450" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E253811" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60807" e_stop="60905"/>
          <exon e_start="62008" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGGGTATGATCTTTTTCCATTCATCTTTATTTTTTATGCTGGAGACTGGAGAGGATCTTTTGTCTTTTGATTGTCAGTAAATTCATTAATAATTGGATGCTCTCTCGAGGAACCATTAGTATTCAAATATTGGTGAGTAGTCTGATGCTTACTGTTGTATTGCTGATTGATCAAATGTTAGCATATACATTTGAGGAGGACACGGCTGGTTAATTTAAGAGTTGGATTTTAGAAGGAAAAGTTAGATTACTTGGGGTATGTAGATTGCAGCAAATTTTTTGAGGGTTCCATTTATAAACTCAATGATTTAGGGGAAACAGTAGACTTCTATACACCAAAACGCAAAAAGAAGGAGAAGTATTTAGAGGGAATGTGTATATTTGGTCCTCATCAGAATACGATATTTAAAGTTTCTACAACAATCTTGGCCGTCCAGTTTCAGCTACCTGTGGCAACCATCACAATGCCTCTTAGATCTTTTACAAATGCACCCTACTTTAACCTTCAGATTTCCTATTGTCTTGTAATAATCTGTGTCAAATGCTGGACCACTAAACATACTGCTTGTTATTTTACATGTGTCAGAGAGAGGAAGACACGGGGAGGTTGTCAGCAACTCAGCATATTGGGTACTGGGTTCTGTATTTCTTTGATCCTACTTAAAAGCAAGAACTAGGAACTAGATGATCTTTTAGGGGTTGTTGGGTAAAGTGTATAAGAATAATCTAAATAGAGTGTATTAGTAATGCTTGCATTAATGCTAGATGATAATAGTCTATGCTAAATTTGAGAATCTTCCCCAAAACCGATTCAGCTCTAAATTCAGAATTTATCTCTAAATGCCCAAGGATCATTAACACAGACATGATGTGGTATACTGGTACGTCTCCAGACGTTATGCGTGCAAACAAGTTTCTAACTTTTATCAAATTGTAGACGATATTAATTATGGATATCCCATGATTGCATTGCTTATATATGTAGTAGTCTAGTAGATGTAGTTTCATTGATTGCTTAGTACCCTCCCATTGGGATGGTAAATATGGTGCTATAAATTTTTCGCTGCTGCCTGTTTTACCGATCTCTTCATTGTTCTTGTTTCCAGGGAGTACTGGAACAGTAAGACCCCTGGAACATAT-CACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAG</genome_strand>
        <mrna_strand>TCATTATACCTATATAGGCGACAAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTACTGGAACAGTAAGACCCCTGGAACATGTGGACTG-AATAGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGTCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295896" ref_strand="+" ref_description="SGN-E295896 [cLET-27-E18]">
      <seq>gaacatatcactgcatttgctgcgatactcctttatttgaatcttctaccaaatttgatagtggaaccggatggccatcgtactaccagcccatagacaacaatgtgaagtcaaagatggacttgtctatcattttcatgcctcgtcaagaagttctatgtgcagcttgcgatgctcatcttgggcatgtatttgatgatggccctccgcctactggaaagcgttactgcatcaatagcgcttccctgaaattgaaggccaagtagagctgtgctgtgtagaaataccaaaggtaatggtttcctcaggaaatgcaagatataaagctgcagaattattcatatgcacgaataatgttgcttctaaagtttcaatcgaactttgagagagtttcttctctgtgatgttgttaaagttcatatgttcacatatacataatatataagttggtcaaatgtactcatttttagcctactatacgtagatattttacctgtttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="61734" stop="63011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62034" g_stop="62073" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62163" g_stop="62360" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="238" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62449" g_stop="62708" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="499" r_length="261" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="500" polyA_stop="511"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E295896" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62034" e_stop="62073"/>
          <exon e_start="62163" e_stop="62360"/>
          <exon e_start="62449" e_stop="62708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGAGTATGTATTCTCCTTATATTTGATTATTACTCAACCTTTCTTAATACTTTTGACATGTGAAACCTGAAATTCGATATTGCTTGTTGCAGATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAGGTACATTACTTTACTTCCTTTACTACAGTCTATGCTCATTCTCAGTTGCTCCATTTATATGAGATTGAAACCTAGCTTATACGTGCAGCGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAG-AATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCTGTTT</genome_strand>
        <mrna_strand>GAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA.........................................................................................ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG........................................................................................CGCTTCCCTGAAATTGAAGGCCAAGTAGAGCTGTGCTGTGTAGAAATACCAAAGGTAATGGTTTCCTCAGGAAATGCAAGATATAAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E604602" ref_strand="+" ref_description="SGN-E604602 [74739]">
      <seq>gcctcctgtcggagaaactttgatatagatgtaacactgatggataactttagccgccccatgactgaagaagcggaggttgttgcttcgcttgtgtactctgatgataatacaccggttgagaagccagttgatgctgatgcagcccttcttacaagttatgatggaattgaatatgcttcttctgatagaccaagcaaagtaattagtggacgtgcttcctttaagctcaagatatctcagctttcatccaagtgcgataacaggctgtttctcattaggtttgacattccaaaactgggtaaatatcctttccttgaggtattttccagaccaatacggtgtatttctcggaatcgcagcacgcgggcgacctctcttatgttgaggaaatcatctttggggatccatttgctaaatggatctcaatctcctgtgttggacgatggatcttctgaccggccttgtattgtacgtgaagcaaaacaaagtccatcatcaaaacgggtcaaattaggacaagagaaactatgtgcaaattttaaggatgatttttgtgctgaagcaagcttaaatggtggcttcaagatctcattccttggacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="66693" stop="68535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66993" g_stop="67070" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67071" i_stop="67159" i_length="89">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67160" g_stop="67324" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="243" r_length="165" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67325" i_stop="67876" i_length="552">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.858" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67877" g_stop="68235" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="607" r_length="364" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E604602" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E604602" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66993" e_stop="67070"/>
          <exon e_start="67160" e_stop="67324"/>
          <exon e_start="67877" e_stop="68235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCCTGTCGGAGAAACTTTGATATAGATGTGACACTGATGGATAACTTTAGCCGCCCCATGACTGAAGAAGCGGAGGTTTGTCATTTATTTGTCTATATAAAAAATTAAGTGAAGTCTGTAAGTTGCTGCAACTGTTCTTATTGATATATGTTATGCTTCCAAAGGTTGTTGCTTCGCTTGTGTACTCTGATGATAATACACTGGTTGAGAAGCCAGTTGATGCTGATGCAGCCCTTCTTACAAGTTATGATGGAATTGAATATGCTTCTTCTGATAGACCAAGCAAAGTAATTAGTGGACGTGCTTCCTTTAAGCTCAAGATATCTCAGGTACTGGATAGTTGTATCTCTTCTTTTAGTACCTGTAAGACAAAGTGGACAGAAGTGTTTGTTGATTGCAATCTTGAACTAGAGAATACTTGCTTTGGAGAAGGTATATTTATTAACACAATCTCTACTTGCGAAAAAGGTATGTGTAACAAGGCAAATACTGTCAGTGCTTGTTCCTTTTACCATCGAGTTATTTTACATGATCATAGATGTTGCAAATTTAACATTGAATTCTGCCAATCTGTGTCACCACAGTTAGAATGATAATATTTACTGGATGAGCACCTCAATATGGATATATTATGCCTCATAAAAATCATCCTAGTTTATAATCTGTGAACTTGACTACTTGTGGAGCGTTTTGTGTAGCTGGTCAAACGCAAAGACCATTACAACATTAAGTAGAGTGCATTGTTGTAGTTCACTTATACCTGTAAATTGACGAGAGTTATGCTTGGAGATGAATAAACATACTAATGCTATCTGATTACTTAGATAATGCTTCTTTCTATTAAATCCATTTAGAAAAGTGACCTTCTGTCTCAATTGCAGCTTTCATCCAAGTGCGATAACAGGCTGTTCCGCATTAGGTTTGACATTCCAAGACTGGGTAAATATCCTTTCCTTGAGGTATTTTCCAGACCAATACGGTGTATTTCTCGGAATCGCAGCACGCGGGCGACCTCTCTAATGTTGAAGAAATCATCTTTGGGGATCCATTTGCTAAATGGATCTCAATCTCCTGTGTTGGACGATGGATCTTATGATCGTCCCTGTATTGTACGTGAAGCAAAACAAAGTCCATCATCAAAACGGGTCAAATTAGGACAAGAGAAACTATGTGCAAATTTTAAGGATGA-TTTTGTGCTGAAGCAAGC-T-AACGGTGG-TTCAAGATCTCATTCC-TGGACCTC</genome_strand>
        <mrna_strand>GCCTCCTGTCGGAGAAACTTTGATATAGATGTAACACTGATGGATAACTTTAGCCGCCCCATGACTGAAGAAGCGGAG.........................................................................................GTTGTTGCTTCGCTTGTGTACTCTGATGATAATACACCGGTTGAGAAGCCAGTTGATGCTGATGCAGCCCTTCTTACAAGTTATGATGGAATTGAATATGCTTCTTCTGATAGACCAAGCAAAGTAATTAGTGGACGTGCTTCCTTTAAGCTCAAGATATCTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCATCCAAGTGCGATAACAGGCTGTTTCTCATTAGGTTTGACATTCCAAAACTGGGTAAATATCCTTTCCTTGAGGTATTTTCCAGACCAATACGGTGTATTTCTCGGAATCGCAGCACGCGGGCGACCTCTCTTATGTTGAGGAAATCATCTTTGGGGATCCATTTGCTAAATGGATCTCAATCTCCTGTGTTGGACGATGGATCTTCTGACCGGCCTTGTATTGTACGTGAAGCAAAACAAAGTCCATCATCAAAACGGGTCAAATTAGGACAAGAGAAACTATGTGCAAATTTTAAGGATGATTTTTGTGCTGAAGCAAGCTTAAATGGTGGCTTCAAGATCTCATTCCTTGGACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E441954" ref_strand="+" ref_description="SGN-E441954 [cSTA-31-J21]">
      <seq>aactcacccattgatgacttgccaagtaacagagatccaatctctgatatggttgtttttaaatactgtctcgctgatctgaacgagaggcgtcttcttctcaaggaaatggcaatgactgctaaagaagaagaacttgcaacctttgccgagagagtctctttattctctggatgttcacaccacaggcatcaaatatcaatttcaaagaggctgatagaagagggaatttactgttggaacttaatatccaacgataaccaccatgtcctttgggagaatttggtgtccgggcttcaagagcatttcctgaagatgacatttggtcgtatcagatctctaactcatcaggatttcaacctcctgaggagagtctctggttgtcaagatctagtgtctcaagacaactttgaaaagttgtggtgttggctgtacccagtagcttttacattgtcacagcaatgtatttcttcattgtggggttcgacatcacccatgtggatcgaagggttcataaccaaggaagaagcagagtcttcacttaaaagtctgggagctcttcaagaaccaggtacttatatactgcggtttcctacatcaaggagctggccccaccctgacgnnctgtaactgggtcgtcacttatgttgggaagtgactataccattcaccacagacttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="69040" stop="71869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69340" g_stop="69527" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69528" i_stop="70381" i_length="854">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70382" g_stop="70544" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="351" r_length="163" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70545" i_stop="71240" i_length="696">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71241" g_stop="71567" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="680" r_length="329" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E441954" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69340" e_stop="69527"/>
          <exon e_start="70382" e_stop="70544"/>
          <exon e_start="71241" e_stop="71567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCGCCCGTTGATGACTTGCCAAATAACAGAGATCCGATTTCGGATATGGTTGTTTTTAAATACTGTCTCGCTGATCTCAACGAGAGGCGTCTTCTTCTCAAGGAAATGGCAATGACTGCTAAAGAAGAAGAACTTGCAACCTTTGCCGAGAGAGTCTCTTTATTCTCTGGATGTTCACACCACAGGTATATTTTTTTATATTGTTGCATTTTGAGGTGTCTTTGAATGGTTATATTAACAGCATCTAGTTCTTAGGGCCACGTTTGGCATTTATTCCCTTCTTTCAGAGTTACGCTGTTATTTCATTAAAGTTCTGAAAGAACGAAATATGTATAGAGCATATGCATGTGCAAGCAAAAAAACTTTTGCGATTTATCTCATGGCAGAAAATTAGAAGTTTTTTTTGTGTGTTATTGTTTATGTCATTTTCCTTTATATTTGTCCCCTGTGGCCCTGACTCCTGAGCTTTTAAAATTGCATACTCTTTGGAAGAAAACAAGTAACATATGAAAACGTAAAAAAATAGGATATTTGGAAGGGTAATACCAAAATGATATTGACATCCAATAAGTAAAAGATCGTCATAAATGTGCTGCTTCTGAGAAAATTAAGTCGAGAGAAAAATGACTAGCACAAGGCGTAGCTGTTTTCCCAAGTTTTTTCCTCATTAGTTCATGTCTTCATGAGGTTTAGAATCATGTGTTCTTAAATGACTAATATATAAGTAAACGTTATTTCTGAAAAGCAAAAATATTATCTCTAACATCACAAATATGATCAACTATCAATTTAGGATGAAAGGATTGCTTATATCATGGTCGGGATAAAAACATGTGCACTTGCAATATGCTTCTAGGGAAAATTTGAACTATTGGAATTAATACATTGATTTTAAATTTATGGATCAGGGTTAAATTGACACACAGTTCAATAGGATATAAACAAAATGTACATGTCTTGGTTTCAGTTTTCATTTTATTGTTGTCATCACTATTTGGTGACCTTGTATGCTGTTGTCTGAATCACATTACCTTTTTAGGCATCAAATATCAATTTCAAAGAGGCTGATAGAAGAGGGAATTAACTGTTGGAACTTAATATCCAACTATAACCACCATGTCCTCTGGGAGAATTTGGTGTCTGGGCTTCAAGAGCATTTCCTGAAGATGACATTTGGTCGTATCAGATCTCTAACTCATCAGGTTCTCTTTTTTCTCTTTAAACTGGTAGGAAGTCTGAAAGAATACTTCAAAAAGGGCTATTTAGAAGTTAGTGTGTTCTCTGAGGTTCCAAATCCACTTACTCACCAAATTCGGAACTATATTCCTTTTTTTAACTTGAAATGTCAATTGTGTTTGGGAAGGTTTGGTGGATTTTTTCTGCAGAAGACTAGATTAAGTAAAAGGGAAAGTGAAAGGGAAAGAGAAACATCCCTTTTTGCCGGAGGGATTAATTATCTGTCTTGGAGAATTTGTGAAATTCTCATTTTTCTATTTTGATGTCATTTTTCGTTGGGATGTGATAATTTTGGGCAGCGTGAAGGGCCAATATTGCATATTAAGGGTATGGCCAATGCATAGTGGGTGCAAACCATGGAGACCAGGATTCAAAATTCCAATAGAAACAAAAAATTCACTGAATCAGATTCTTCTTCTTCTGATGATGATGTATCGTAAAAAAAAAGCAAAAAAAAAAAAAATAGAAACAAAAAAACACTAGGTTAGGTGGGGGCGTGGGGCAGAATCACCTTACTTGTGTTGGTGGGAGGTAGCAAGTATCCGGTGGAATAGTTGAGTTGTATGAAAGCTGGCCTTTTGACAATTCCAAAACTGTTTTGACAATATTACAACTCTGAAAATTATTTGCTTCTCTTGCTGATGAATTCGTCCAACTTGCAGGATTTCAACCTCCTGAGGAGAGTCTCTGGTTGTCAAGATCTAGTGTCTCAAGACAACTTTGAAAAGTTGTGGTGTTGGCTGTACCCAGTAGCTTTTACATTGTCACAGCAATGTATTTCTTCATTGTGGGGTTCAACATCACCCGTGTGGATCGAAGGGTTCATTACCAAGGAAGAAGCAGAATCTTCACTTACAATTCTGGGAGCTCTTCAAGAACCAGGTACTTATATACTGCGATTTCCTACATCAAGGAGCTGGCCCCACCCTGACGCT-GGTAACTTGGTCGTCACTTATGTT-GGAAGTGACTACACCATTCACCACAGGCTT</genome_strand>
        <mrna_strand>AACTCACCCATTGATGACTTGCCAAGTAACAGAGATCCAATCTCTGATATGGTTGTTTTTAAATACTGTCTCGCTGATCTGAACGAGAGGCGTCTTCTTCTCAAGGAAATGGCAATGACTGCTAAAGAAGAAGAACTTGCAACCTTTGCCGAGAGAGTCTCTTTATTCTCTGGATGTTCACACCACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAAATATCAATTTCAAAGAGGCTGATAGAAGAGGGAATTTACTGTTGGAACTTAATATCCAACGATAACCACCATGTCCTTTGGGAGAATTTGGTGTCCGGGCTTCAAGAGCATTTCCTGAAGATGACATTTGGTCGTATCAGATCTCTAACTCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCAACCTCCTGAGGAGAGTCTCTGGTTGTCAAGATCTAGTGTCTCAAGACAACTTTGAAAAGTTGTGGTGTTGGCTGTACCCAGTAGCTTTTACATTGTCACAGCAATGTATTTCTTCATTGTGGGGTTCGACATCACCCATGTGGATCGAAGGGTTCATAACCAAGGAAGAAGCAGAGTCTTCACTTAAAAGTCTGGGAGCTCTTCAAGAACCAGGTACTTATATACTGCGGTTTCCTACATCAAGGAGCTGGCCCCACCCTGACGNNCTGTAACTGGGTCGTCACTTATGTTGGGAAGTGACTATACCATTCACCACAGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E441955" ref_strand="+" ref_description="SGN-E441955 [cSTA-31-J21]">
      <seq>aactcacccattgatgacttgccaagtaacagagatccaatctctgatatggttgtttttaaatactgtctcgctgatctgaacgagaggcgtcttcttctcaaggaaatggcaatgactgctaaagaagaagaacttgcaacctttgccgagagagtctctttattctctggatgttcacaccacaggcatcaaatatcaatttcaaagaggctgatagaagagggaatttactgttggaacttaatatccaacgataaccaccatgtcctttgggagaatttggtgtccgggcttcaagagcatttcctgaagatgacatttggtcgtatcagatctctaactcatcaggatttcaacctcctgaggagagtctctggttgtcaagatctagtgtctcaagacaactttgaaaagttgtggtgttggctgtacccagtagcttttacattgtcacagcaatgtatttcttcattgtggggttcgacatcacccatgtggatcgaagggttcataaccaaggaagaagcagagtcttcacttaaaagtctgggagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="69040" stop="71748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69340" g_stop="69527" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69528" i_stop="70381" i_length="854">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70382" g_stop="70544" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="351" r_length="163" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70545" i_stop="71240" i_length="696">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71241" g_stop="71448" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="559" r_length="208" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E441955" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69340" e_stop="69527"/>
          <exon e_start="70382" e_stop="70544"/>
          <exon e_start="71241" e_stop="71448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCGCCCGTTGATGACTTGCCAAATAACAGAGATCCGATTTCGGATATGGTTGTTTTTAAATACTGTCTCGCTGATCTCAACGAGAGGCGTCTTCTTCTCAAGGAAATGGCAATGACTGCTAAAGAAGAAGAACTTGCAACCTTTGCCGAGAGAGTCTCTTTATTCTCTGGATGTTCACACCACAGGTATATTTTTTTATATTGTTGCATTTTGAGGTGTCTTTGAATGGTTATATTAACAGCATCTAGTTCTTAGGGCCACGTTTGGCATTTATTCCCTTCTTTCAGAGTTACGCTGTTATTTCATTAAAGTTCTGAAAGAACGAAATATGTATAGAGCATATGCATGTGCAAGCAAAAAAACTTTTGCGATTTATCTCATGGCAGAAAATTAGAAGTTTTTTTTGTGTGTTATTGTTTATGTCATTTTCCTTTATATTTGTCCCCTGTGGCCCTGACTCCTGAGCTTTTAAAATTGCATACTCTTTGGAAGAAAACAAGTAACATATGAAAACGTAAAAAAATAGGATATTTGGAAGGGTAATACCAAAATGATATTGACATCCAATAAGTAAAAGATCGTCATAAATGTGCTGCTTCTGAGAAAATTAAGTCGAGAGAAAAATGACTAGCACAAGGCGTAGCTGTTTTCCCAAGTTTTTTCCTCATTAGTTCATGTCTTCATGAGGTTTAGAATCATGTGTTCTTAAATGACTAATATATAAGTAAACGTTATTTCTGAAAAGCAAAAATATTATCTCTAACATCACAAATATGATCAACTATCAATTTAGGATGAAAGGATTGCTTATATCATGGTCGGGATAAAAACATGTGCACTTGCAATATGCTTCTAGGGAAAATTTGAACTATTGGAATTAATACATTGATTTTAAATTTATGGATCAGGGTTAAATTGACACACAGTTCAATAGGATATAAACAAAATGTACATGTCTTGGTTTCAGTTTTCATTTTATTGTTGTCATCACTATTTGGTGACCTTGTATGCTGTTGTCTGAATCACATTACCTTTTTAGGCATCAAATATCAATTTCAAAGAGGCTGATAGAAGAGGGAATTAACTGTTGGAACTTAATATCCAACTATAACCACCATGTCCTCTGGGAGAATTTGGTGTCTGGGCTTCAAGAGCATTTCCTGAAGATGACATTTGGTCGTATCAGATCTCTAACTCATCAGGTTCTCTTTTTTCTCTTTAAACTGGTAGGAAGTCTGAAAGAATACTTCAAAAAGGGCTATTTAGAAGTTAGTGTGTTCTCTGAGGTTCCAAATCCACTTACTCACCAAATTCGGAACTATATTCCTTTTTTTAACTTGAAATGTCAATTGTGTTTGGGAAGGTTTGGTGGATTTTTTCTGCAGAAGACTAGATTAAGTAAAAGGGAAAGTGAAAGGGAAAGAGAAACATCCCTTTTTGCCGGAGGGATTAATTATCTGTCTTGGAGAATTTGTGAAATTCTCATTTTTCTATTTTGATGTCATTTTTCGTTGGGATGTGATAATTTTGGGCAGCGTGAAGGGCCAATATTGCATATTAAGGGTATGGCCAATGCATAGTGGGTGCAAACCATGGAGACCAGGATTCAAAATTCCAATAGAAACAAAAAATTCACTGAATCAGATTCTTCTTCTTCTGATGATGATGTATCGTAAAAAAAAAGCAAAAAAAAAAAAAATAGAAACAAAAAAACACTAGGTTAGGTGGGGGCGTGGGGCAGAATCACCTTACTTGTGTTGGTGGGAGGTAGCAAGTATCCGGTGGAATAGTTGAGTTGTATGAAAGCTGGCCTTTTGACAATTCCAAAACTGTTTTGACAATATTACAACTCTGAAAATTATTTGCTTCTCTTGCTGATGAATTCGTCCAACTTGCAGGATTTCAACCTCCTGAGGAGAGTCTCTGGTTGTCAAGATCTAGTGTCTCAAGACAACTTTGAAAAGTTGTGGTGTTGGCTGTACCCAGTAGCTTTTACATTGTCACAGCAATGTATTTCTTCATTGTGGGGTTCAACATCACCCGTGTGGATCGAAGGGTTCATTACCAAGGAAGAAGCAGAATCTTCACTTACAATTCTGGGAGCTC</genome_strand>
        <mrna_strand>AACTCACCCATTGATGACTTGCCAAGTAACAGAGATCCAATCTCTGATATGGTTGTTTTTAAATACTGTCTCGCTGATCTGAACGAGAGGCGTCTTCTTCTCAAGGAAATGGCAATGACTGCTAAAGAAGAAGAACTTGCAACCTTTGCCGAGAGAGTCTCTTTATTCTCTGGATGTTCACACCACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAAATATCAATTTCAAAGAGGCTGATAGAAGAGGGAATTTACTGTTGGAACTTAATATCCAACGATAACCACCATGTCCTTTGGGAGAATTTGGTGTCCGGGCTTCAAGAGCATTTCCTGAAGATGACATTTGGTCGTATCAGATCTCTAACTCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCAACCTCCTGAGGAGAGTCTCTGGTTGTCAAGATCTAGTGTCTCAAGACAACTTTGAAAAGTTGTGGTGTTGGCTGTACCCAGTAGCTTTTACATTGTCACAGCAATGTATTTCTTCATTGTGGGGTTCGACATCACCCATGTGGATCGAAGGGTTCATAACCAAGGAAGAAGCAGAGTCTTCACTTAAAAGTCTGGGAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E336074" ref_strand="+" ref_description="SGN-E336074 [cTOE-12-A2]">
      <seq>ctacatcaaggagctggccccaccctgacgctggtaacttggtcgtcacttatgttggaagtgactacaccattcaccacaggcttatatccctcgagtccatttacagttctggggtcaagggaacgacgataaggccaattcaagacatgctgcttgaacagcctgagctcangcgactcggaaggattgtgagaagcttgaggtcactcaagatttatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="71182" stop="72241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71482" g_stop="71590" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71591" i_stop="71748" i_length="158">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.126" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71749" g_stop="71826" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="187" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71827" i_stop="71904" i_length="78">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.459" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71905" g_stop="71941" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="223" r_length="36" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E336074" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>224</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336074" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71482" e_stop="71590"/>
          <exon e_start="71749" e_stop="71826"/>
          <exon e_start="71905" e_stop="71941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCAAGGAGCTGGCCCCACCCTGACGCTGGTAACTTGGTCGTCACTTATGTTGGAAGTGACTACACCATTCACCACAGGCTTATATCCCTCGAGTCCATTTACAGGTAAATGTACTATTTCTTCTTGTTCTCTTTCTTAACCTTTCACCTATTTCCATTGCATTGTAAGATTTTCCCCGTGGAAGAAAGTTTGGGAACATGTGAGACATACAGAGTTGATCTCAGCATCACTAAGAGGGTCCTTTTTCTATTGTCCACTGTAGTTCTGGGGTCAAGGGAACGACGATAAGGCCAATTCAAGACATGCTGCTTGAACAGCCTGAGCTCAGGCGACTCGGAAGGCAAGATTTCTAACTCTTTTGATCATCCATTCATCCAGCTTACTCTTTAAGTAATTGTTAGAAACCTTCAAACCGCAGGATTGTGAGAAGCTTGTAGGTCACTCAAGATTTATAC</genome_strand>
        <mrna_strand>CTACATCAAGGAGCTGGCCCCACCCTGACGCTGGTAACTTGGTCGTCACTTATGTTGGAAGTGACTACACCATTCACCACAGGCTTATATCCCTCGAGTCCATTTACAG..............................................................................................................................................................TTCTGGGGTCAAGGGAACGACGATAAGGCCAATTCAAGACATGCTGCTTGAACAGCCTGAGCTCANGCGACTCGGAAG..............................................................................GATTGTGAGAAGCTTG-AGGTCACTCAAGATTTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330624" ref_strand="+" ref_description="SGN-E330624 [cTOD-8-P7]">
      <seq>tttttttttctttggtttttttaaaaaaaatatttgctggggtaccttcttgatgtctgcttcaagaaaatgagcactttctgcaataaagtttcaaggaagatattgttctgttgggaatatcagtagctttggttgttgaatctcgtttaaagctgagaggccaaaagtctaaagttattgagtattcagaactaaatgggaaattctaaaaatattgctctctatgtaacaatatgtgtgatttcttttatcatctcgaagattattatgacaatcgtctgttaccgtagatggaagagaaagcaaatggttgttcaagacagcttatctggtggaaaactagtgatgtttaagtcaccgaaaatgaacacgttgaagtccaacatgttcttgaagaggaccatgaagctgactaacaaagatattataggatcaggaggctatggaacagtctataaactgacaattaacgaatcaatttctttcgcggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="73180" stop="75076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73477" g_stop="73574" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73575" i_stop="73922" i_length="348">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73923" g_stop="73973" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="149" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73974" i_stop="74275" i_length="302">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74276" g_stop="74318" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="192" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74319" i_stop="74395" i_length="77">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.262" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74396" g_stop="74537" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="334" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74538" i_stop="74616" i_length="79">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74617" g_stop="74776" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="494" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E330624" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73477" e_stop="73574"/>
          <exon e_start="73923" e_stop="73973"/>
          <exon e_start="74276" e_stop="74318"/>
          <exon e_start="74396" e_stop="74537"/>
          <exon e_start="74617" e_stop="74776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTTTTCTTTGGTTTTTTTAAAAAAAATATTTGCTGGGGTACCTTCTTGATGTCTGCTTCAAGAAAATGAGCACTTTCTGCAATAAAGTTTCAAGGTGAAGTCTTATTCTAACTTCTTAAAAGCTTTGTGTGTGTTTGAACTACTCTTCTTGATTCTAGTCGCTCTCCGTTTGATCATAGATTTTGAAGTTTAAAATTTGAGTTGTTGAAGTGGTGTTTGTGAAAAAAAAAATTTGAACATTTCACGGCCAAAAAAGATATTTGAAAATGATTTTTCTAAAACTACTCTCAAAATCTATGGTCAAACGCTAAATAAATTTTGAAGTCGTGTGAACGATATTATTGTCTTTTTTCTGAAGGCCTAGATAGTTATTTTTTTTCTTAGAAGATGGTTCTTTTTTTGGACTAATGACTTGCTTGTTCATTACTGTGGACTGTTATAGGAAGATATTGTTCTGTTGGGAATATCAGTAGCTTTGGTTGTTGAATCTCGTGTAAGTTAAGTTGTGGTTGTATTTTCTGCAAGTGGAATGTAGGATCTTTAGGTTGTGTGTTAAGATTGACCCTCGAGTGAAAAAACAGAAGGAAGATTGATTGTAGGGACGAAAATCAGCCTTAGTGATATCCAAAAACGCCAAGTGAAAAGGCGTTGCTCAAAGTAAAAAAAAAAAAATTTAGTCCAGGAATAGTTAAAACCTGCAGGAAGTTTAAACAGCTCCTATTCACTAACAATCTGTTGTTCCTTTGTGTTTTTCTTCTGGTACACCTGATTAACAACATTTTATGTAATTCACAGTTAAAGCTGAGAGGCCAAAAGTCTAAAGTTATTGAGTATTCAGGTACCTGTTTTTTTTACTCTATATTTCTGCTCAAATGAACAGTGTGTTGGTTTCTAACTTGGTCTAACTACTTGCAGAACTAAATGGGAAATTCTAAAAATATTGCTCTCTATGTAACAATATGTGTGATTTCTTTTATCATCTCGAAGATTATTATGACAATCGTCTGTTACCGTAGATGGAAGAGAAAGCAAATGGTTGTTCAAGACAGCTTATCTGGTATGATATGATGTTCAGTATTCAGAATTCGATAGGTTGGATCAAGAATATCTTATGTTTTTGTTATGTCCATATCCAGGTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGT</genome_strand>
        <mrna_strand>TTTTTTTTTCTTTGGTTTTTTTAAAAAAAATATTTGCTGGGGTACCTTCTTGATGTCTGCTTCAAGAAAATGAGCACTTTCTGCAATAAAGTTTCAAG............................................................................................................................................................................................................................................................................................................................................................GAAGATATTGTTCTGTTGGGAATATCAGTAGCTTTGGTTGTTGAATCTCGT..............................................................................................................................................................................................................................................................................................................TTAAAGCTGAGAGGCCAAAAGTCTAAAGTTATTGAGTATTCAG.............................................................................AACTAAATGGGAAATTCTAAAAATATTGCTCTCTATGTAACAATATGTGTGATTTCTTTTATCATCTCGAAGATTATTATGACAATCGTCTGTTACCGTAGATGGAAGAGAAAGCAAATGGTTGTTCAAGACAGCTTATCTG...............................................................................GTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482052" ref_strand="+" ref_description="SGN-E482052 [cSTD-20-N9]">
      <seq>atttctttggttaaaaaaaacatttgctgggctaccttcttgatgtctgcttcaagaaaatgagcacttcctgcaataaagtttcaagttaaagctgtgaggccaaagtctaagagtcgttgagtattcagaactaaatgggaaattctaaaaatattgcactctatgtaacaatatgtgtggtttcttttatcatctcgaagattattatgacaatcgtctgttaccgtagatggaagagaaagcaaatggttgttcaagacagcttatctggtggaaagctagtgatgtttcagtcgccgaaaatgaacacgttgaagtccaacatgttcttgaaaaggaccatgaagctgactaacaaagatattataggatcaggaggctatggaattgtctataaattgacaattaacgaatcaatttctttcgcggtaaagaggttaaacagaataagtgcagaacaagacagaggttttgaaagagagttggaggcaatgggggacataaagcatcgaaatatagtgacacttcatggatactacagtacaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="73188" stop="75195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73487" g_stop="73574" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73575" i_stop="74275" i_length="701">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.954" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74276" g_stop="74318" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="131" r_length="43" r_score="0.860"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74319" i_stop="74395" i_length="77">
            <donor d_prob="0.948" d_score="0.86"/>
            <acceptor a_prob="0.262" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74396" g_stop="74537" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="273" r_length="142" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74538" i_stop="74616" i_length="79">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74617" g_stop="74895" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="552" r_length="279" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E482052" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73487" e_stop="73574"/>
          <exon e_start="74276" e_stop="74318"/>
          <exon e_start="74396" e_stop="74537"/>
          <exon e_start="74617" e_stop="74895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTTTTTTTAAAAAAAATATTTGCTGGGGTACCTTCTTGATGTCTGCTTCAAGAAAATGAGCACTTTCTGCAATAAAGTTTCAAGGTGAAGTCTTATTCTAACTTCTTAAAAGCTTTGTGTGTGTTTGAACTACTCTTCTTGATTCTAGTCGCTCTCCGTTTGATCATAGATTTTGAAGTTTAAAATTTGAGTTGTTGAAGTGGTGTTTGTGAAAAAAAAAATTTGAACATTTCACGGCCAAAAAAGATATTTGAAAATGATTTTTCTAAAACTACTCTCAAAATCTATGGTCAAACGCTAAATAAATTTTGAAGTCGTGTGAACGATATTATTGTCTTTTTTCTGAAGGCCTAGATAGTTATTTTTTTTCTTAGAAGATGGTTCTTTTTTTGGACTAATGACTTGCTTGTTCATTACTGTGGACTGTTATAGGAAGATATTGTTCTGTTGGGAATATCAGTAGCTTTGGTTGTTGAATCTCGTGTAAGTTAAGTTGTGGTTGTATTTTCTGCAAGTGGAATGTAGGATCTTTAGGTTGTGTGTTAAGATTGACCCTCGAGTGAAAAAACAGAAGGAAGATTGATTGTAGGGACGAAAATCAGCCTTAGTGATATCCAAAAACGCCAAGTGAAAAGGCGTTGCTCAAAGTAAAAAAAAAAAAATTTAGTCCAGGAATAGTTAAAACCTGCAGGAAGTTTAAACAGCTCCTATTCACTAACAATCTGTTGTTCCTTTGTGTTTTTCTTCTGGTACACCTGATTAACAACATTTTATGTAATTCACAGTTAAAGCTGAGAGGCCAAAAGTCTAA-AGTTATTGAGTATTCAGGTACCTGTTTTTTTTACTCTATATTTCTGCTCAAATGAACAGTGTGTTGGTTTCTAACTTGGTCTAACTACTTGCAGAACTAAATGGGAAATTCTAAAAATATTGCTCTCTATGTAACAATATGTGTGATTTCTTTTATCATCTCGAAGATTATTATGACAATCGTCTGTTACCGTAGATGGAAGAGAAAGCAAATGGTTGTTCAAGACAGCTTATCTGGTATGATATGATGTTCAGTATTCAGAATTCGATAGGTTGGATCAAGAATATCTTATGTTTTTGTTATGTCCATATCCAGGTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGTAAAGAGGTTAAACAGAATAAGTGCAGAACAAGACAGAGGTTTTGAAAGAGAGTTGGAGGCAATGGGGGACATAAAGCATCGAAATATAGTGACACTTCATGGATACTACAGTACAACGC</genome_strand>
        <mrna_strand>ATTTCTTTGGTTAAAAAAAACATTTGCTGGGCTACCTTCTTGATGTCTGCTTCAAGAAAATGAGCACTTCCTGCAATAAAGTTTCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGCTGTGAGGCC-AAAGTCTAAGAGTCGTTGAGTATTCAG.............................................................................AACTAAATGGGAAATTCTAAAAATATTGCACTCTATGTAACAATATGTGTGGTTTCTTTTATCATCTCGAAGATTATTATGACAATCGTCTGTTACCGTAGATGGAAGAGAAAGCAAATGGTTGTTCAAGACAGCTTATCTG...............................................................................GTGGAAAGCTAGTGATGTTTCAGTCGCCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAAAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAATTGTCTATAAATTGACAATTAACGAATCAATTTCTTTCGCGGTAAAGAGGTTAAACAGAATAAGTGCAGAACAAGACAGAGGTTTTGAAAGAGAGTTGGAGGCAATGGGGGACATAAAGCATCGAAATATAGTGACACTTCATGGATACTACAGTACAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701239" ref_strand="+" ref_description="SGN-E701239 [FA15BF10]">
      <seq>gtggaaaactagtgatgtttaagtcaccgaaaatgaacacgttgaagtccaacatgttcttgaagaggaccatgaagctgactaacaaagatattataggatcaggaggctatggaacagtctataaactgacaattaacgaatcaatttctttcgcggtaaagaggttaaacagaataagtgcagaacaagacagaggttttgaaagagagttggaggcaatgggggacataaagcatcgaaatatagtgacacttcatggatactacagtacaacgcagtataaccttctgatatatgagcttatgactaatggaagtttagatgaagtacttcatggaaaatcggctgccaggaaggttttggattggcctacaaggtacaaaatagcagtaggagcagcaagaggattatcatatctacatcacgattgcatccctcacatcatccacagagatataaagtcaagtaatatcttgttggatcataacatggaggctcgagtatctgattttggactagccactctgatggagccagataagacgcacgtttcaactttggtagctggaacttttggatatttggctcctgaatattttgacaccggaaaagcaacagtcaaaggagatgtttacagctttggagttgtcttactggaacttctaactgggaaaaagccatcagatgaagcatttttggaggaaggaaccagacttgtaacttgggtaagcttgtagttcaccttttttcttttttatcctagctgctttcgagctgtcattaattcggtcagttgatactgttctgctttacaggtgaagacagttgttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="74317" stop="76096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74617" g_stop="74955" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74956" i_stop="75224" i_length="269">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75225" g_stop="75479" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="594" r_length="255" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75480" i_stop="75555" i_length="76">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75556" g_stop="75796" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="835" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E701239" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E701239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74617" e_stop="74955"/>
          <exon e_start="75225" e_stop="75479"/>
          <exon e_start="75556" e_stop="75796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGTAAAGAGGTTAAACAGAATAAGTGCAGAACAAGACAGAGGTTTTGAAAGAGAGTTGGAGGCAATGGGGGACATAAAGCATCGAAATATAGTGACACTTCATGGATACTACAGTACAACGCAGTATAATCTTCTGATATATGAGCTTATGACTAATGGAAGTTTAGATGAAGCACTTCATGGTATATGTTTATGTCTGTTTCTTATTGTCTAAGTCTATGTTGCTCGAACTCTCAAAAATGTTCCGACCCTCCATAAATGCTGTACTTTTGGAGGACCTGACTTGCCTACAGAGGTACTTTTTGGAGTCCAAGCAACATAGCTCTAAGGATGGTCATTCTTTTAAGCTTATTTCAGCTTCTGCTGATGCTAGAATCAGAGATGCACAATAAAGACCTATCAAGTGTTTGATATACAGATGAACTTTAAGAATGGTAACATCATAATGCAGGAAAATCGGCTGCCAGGAAGGTTTTGGATTGGCCTACAAGATACAAAATAGCAGTAGGAGCAGCAAGAGGATTATCATATCTACATCACGATTGCATCCCTCACATCATCCACAGAGATATAAAGTCAAGCAATATCTTGTTGGGTCATAACATGGAGGCTCGAGTATCTGATTTTGGACTAGCCACTCTGATGGAGCCAGATAAGACGCACGTTTCAACTTTGGTAGCTGGAACTTTTGGATATTTGGCTCCTGGTATGTTTTTATTAGACCATCAGAAGACTCGAATCTGTGTTTGGAAAACTATCAATTACATTATGGTCTTTTGCAGAATATTTTGACACCGGAAAAGCAACAGTCAAAGGAGATGTTTACAGCTTTGGAGTTGTCTTACTGGAACTTCTAACTGGGAAAAAGCCATCAGATGAAGCATTTTTGGAGGAAGGAACCAGACTTGTAACTTGGGTAAGCTTGTAGTTCACCTTTTTTCTTTTTTATCCTAGCTGCTTTCGAGCTGTCATTAATTCGGTCAGTTGATACTGTTCTGCTTTACAGGTGAAGACAGTTGTTCA</genome_strand>
        <mrna_strand>GTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGTAAAGAGGTTAAACAGAATAAGTGCAGAACAAGACAGAGGTTTTGAAAGAGAGTTGGAGGCAATGGGGGACATAAAGCATCGAAATATAGTGACACTTCATGGATACTACAGTACAACGCAGTATAACCTTCTGATATATGAGCTTATGACTAATGGAAGTTTAGATGAAGTACTTCATG.............................................................................................................................................................................................................................................................................GAAAATCGGCTGCCAGGAAGGTTTTGGATTGGCCTACAAGGTACAAAATAGCAGTAGGAGCAGCAAGAGGATTATCATATCTACATCACGATTGCATCCCTCACATCATCCACAGAGATATAAAGTCAAGTAATATCTTGTTGGATCATAACATGGAGGCTCGAGTATCTGATTTTGGACTAGCCACTCTGATGGAGCCAGATAAGACGCACGTTTCAACTTTGGTAGCTGGAACTTTTGGATATTTGGCTCCTG............................................................................AATATTTTGACACCGGAAAAGCAACAGTCAAAGGAGATGTTTACAGCTTTGGAGTTGTCTTACTGGAACTTCTAACTGGGAAAAAGCCATCAGATGAAGCATTTTTGGAGGAAGGAACCAGACTTGTAACTTGGGTAAGCTTGTAGTTCACCTTTTTTCTTTTTTATCCTAGCTGCTTTCGAGCTGTCATTAATTCGGTCAGTTGATACTGTTCTGCTTTACAGGTGAAGACAGTTGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479509" ref_strand="+" ref_description="SGN-E479509 [cSTD-10-A12]">
      <seq>caaaaaaaatacatttttttttccaagaagatggcatcagctggagccatttcagtatggatttcaacatcaacacccataaagatcactgcttttaacaccaaaccaagaatttcttatcctcttaaactttcaagaaatggtatttatcccttatccacatttgagaaaaatggccaatatgaacaaaatttcacaatcaaagttgctgcctcctcttctgttggaagtgcagaatacacagaagaaccagctactaaagtgaaatttcaaagatcattgagcctacctggttgctctacttcattgtcattgcttggaactggatacagggaaaaggtttttgcaattattggtgtcaaggtctatgctgcaggcctctatgtcaatgactccgtctttagtagattagatgcctggcgaggacgttctgctgcagatattcaacaggatccttccttgttcaacaagatctttgaagccaatctggagaaatctttgcttattgtgctggtcagagatattgatggtaaaactttctgggatgccttagatgaagccatttctccgagaatcaaatcccctactgccgatgataagtctgctctttctacattccgtggtgtctttcaagggaaacctcttaagaaagaaacttccatattcttgcttttgggttgacccaaccaaaatgcttgtttcactctcttttgatgggatgccttcctcggttgatgcaactattgagtccccaaatgttgcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="79083" stop="75941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78760" g_stop="78566" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="223" r_length="195" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78565" i_stop="77141" i_length="1425">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.461" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77140" g_stop="77039" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="325" r_length="102" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77038" i_stop="76905" i_length="134">
            <donor d_prob="0.967" d_score="0.96"/>
            <acceptor a_prob="0.806" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76904" g_stop="76749" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="481" r_length="156" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76748" i_stop="76658" i_length="91">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76657" g_stop="76443" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="697" r_length="216" r_score="0.935"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76442" i_stop="76309" i_length="134">
            <donor d_prob="0.920" d_score="0.86"/>
            <acceptor a_prob="0.921" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76308" g_stop="76241" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="765" r_length="68" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E479509" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78760" e_stop="78566"/>
          <exon e_start="77140" e_stop="77039"/>
          <exon e_start="76904" e_stop="76749"/>
          <exon e_start="76657" e_stop="76443"/>
          <exon e_start="76308" e_stop="76241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGCAGCAGCTGGAGCCATTTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTGGTAATAATTCAACTGATTCTTGTAACAAGTTTAAGTCTTTATGTCTAACTTACTATTAGTAGATTTTAAGCTGAATTTTACATCTTTTGTGCAAAAGTGGAAGGAAACCCTTTAAACTGAATACTTACTAAATTTCAGATTGTGGGTATTCTTGGTTTCTTGAATTTTTACTAAATGTTTATACAAATCTGATGTTTGCCATAATTTAGTGAGAAAACCCTGTGTGGAGTATCTACTGTCAATAAAGGTTTTAGCTTTATAATGGTATCTATTGTTAAATCGACTTTAGGCCTAAATCAACACCAAAAGCTAGCTCATGAGGAGAGGATTGACCATGTCATATAAAGAGACCACCCATTCCATTAACCTCTGACGTGGAACTTCTTGACATCCCTTGGGTGGACATCTAGACCGTGAACGATTTAATATGGGGTTCCATTGTCATGAAATAAGAATTTAATTGGGTCCTGCTCTGATATGAAATGGACTTAGGCCTAGATCCACGAGACGTAATTTGCAGTTATTATATTCAAGTCTAAGAAATGTTCACTGAATCAAAGATGGTATGTAAGGAAAAGATTTGATCTTGGCATAAATATATTTGAGATGCTGGTCTGTTTAGAGTCCTTCACAGGACCAGTGCATAACGGGAGCTTAGTGCACCGAGCTGCCTTTTGTTTTTAGAGTTCTCACCATTTTTTTCTATTGTAATGGCCATCTTTTTTTGTTGAAACTGCCTTTAGCATCTCTTTTATCTGGTTTACTAACCAATAAAAAGAAAAGTTAGTATGGAAGAAAAGATTTGATCTTGGCACAAATGTAGCCAAATTGCTGGTTTATTTAGAATTCTTCGCCTACACAATTTTGTTTTGTAATGACGATCTGTTTTGGTTGCAACTGACCTCCAGCATTCTCATTTTGCTGGTTTACTAATGAAAATTGTTGATTACCGATATAAAATTAAAGATGGTATGGAAGAAAGATTTGATCTTGGCACAAATGCAGTTGAATTGCTGGTTTGTTGAGAGTTCTTCGCCTACTTGAATTATTTGAAGACTTTAGATTCGTTCTGATTAGATGTTAGGAAGGACCCTCAAGCTATGAGAGTAGAATTAAACAAAGTCAGAATTCTGGAGTGGCAAAAAACCATCAAATAGGTAGCTTAAATAGTCTTTTAATCCACATTTAACACGTAAATACTGCGTCATCATATAGTTTAATGTTTCAGTTCAGAAAGACAGGATTCAACTAGCAAAATACTCTTTGACTTGATCTTGCTATTTTTAATCCTTAGTGCTCACTTCTTACATAAAGCAAGTGGATTCATGTTTCTACACTATGGCTTCATGAAATAAGGAAGACACTTGATCATATCTTTATTTTTGTCTGTGAGAGCTGACGACTTGGCATTTTTCGTGGATTCAGTTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTGGTTAGCTTCAAATCAATCAATAATCTTTCCCAATAATTTAAGAACAAATTTCAATTATTAGTTTATCTGCCTCAAGTTCTTTCAGATGGTTATGTTCTATGCTTATTTTTGCTGCTCTTCCAACAAAATTTTAGGATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAGGTGAGTCGGCAATGCTTAATTGTTTGACTGGTGAGATGGGGAGGAGATCATATCATCTAAGTGATGCTAAAAATGATTCTATGAATTGCAGCGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATCTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGCGGTGTCTTTCAAGGGAAACCTCTTAAGAAAGAAACTTCCATATTCTTG-ACTTGGATTGACCCAAATAAAATGCTTGTAAGTATGCAGTTTATTTACATTATTCTCTTAAAGCCTAGATTATATCAACTTCAGGCATCAAATGTGGCTTTTGTTTTCTTCTTAGCTTTCTTAGTTCTAATTTGTTGCTCTTTTTTATGGAAATCTTAAAGGTTTCACTCTCTTTTGATGGAATGCCTTCCTCGGTTGACGCAACTATTGAGTCACCAAATGTTGCATC</genome_strand>
        <mrna_strand>AGATGGCATCAGCTGGAGCCATTTCAGTATGGATTTCAACATCAACACCCATAAAGATCACTGCTTTTAACACCAAACCAAGAATTTCTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCCACATTTGAGAAAAATGGCCAATATGAACAAAATTTCACAATCAAAGTTGCTGCCTCCTCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAAGTGAAATTTCAAAGATCATTGAGCCTACCTGGTTGCTCTACTTCATTGTCATTGCTTGGAACTG......................................................................................................................................GATACAGGGAAAAGGTTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGATTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAG...........................................................................................CCAATCTGGAGAAATCTTTGCTTATTGTGCTGGTCAGAGATATTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATTTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGTGGTGTCTTTCAAGGGAAACCTCTTAAGAAAGAAACTTCCATATTCTTGCTTTTGGGTTGACCCAACCAAAATGCTT......................................................................................................................................GTTTCACTCTCTTTTGATGGGATGCCTTCCTCGGTTGATGCAACTATTGAGTCCCCAAATGTTGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322175" ref_strand="+" ref_description="SGN-E322175 [cTOB-24-M22]">
      <seq>gccatttcagtatggatttcaacatccacacccacaaagatcactgcttttaactccatacccagaatttgttatcctcttaaactttcaagaaatggtatttatcccttatctacatttgagagaaatggccaatacgaacaaaatctcacaatcaaagctgctgcctcctcttctgttggaagtgcagaatacacagaagaaccagctactaaggtgaaatttcaaagatcattgagcttacctggttgctctacttccttgtcattgcttggaactggatacagggaaaagatttttgcaattattggtgtcaaggtctatgctgcaggcctctatgtcaatgactccgtctttagtagcttagatgcctggcgaggacgttctgctgcagatattcaacaggatccttccttgttcaacaagatctttgaagcggatttggagaaatctttacttattgtgctggtcagagatgttgatggtaaaactttctgggatgccttagatgaagccatctctccgagaatcaaatcccctactgccgatgataagtctgctctttctacattccgcggtgtctttcaagggaaacctcttaagaaagaaacttccatattcttgacttggattgacccaaataaaatgcttgtttcactctcttttgatggaatgccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="79043" stop="75980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78743" g_stop="78566" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78565" i_stop="77141" i_length="1425">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.461" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77140" g_stop="77039" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="280" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77038" i_stop="76905" i_length="134">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.806" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76904" g_stop="76749" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="436" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76748" i_stop="76658" i_length="91">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76657" g_stop="76443" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="651" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76442" i_stop="76309" i_length="134">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76308" g_stop="76280" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="680" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E322175" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78743" e_stop="78566"/>
          <exon e_start="77140" e_stop="77039"/>
          <exon e_start="76904" e_stop="76749"/>
          <exon e_start="76657" e_stop="76443"/>
          <exon e_start="76308" e_stop="76280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCATTTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTGGTAATAATTCAACTGATTCTTGTAACAAGTTTAAGTCTTTATGTCTAACTTACTATTAGTAGATTTTAAGCTGAATTTTACATCTTTTGTGCAAAAGTGGAAGGAAACCCTTTAAACTGAATACTTACTAAATTTCAGATTGTGGGTATTCTTGGTTTCTTGAATTTTTACTAAATGTTTATACAAATCTGATGTTTGCCATAATTTAGTGAGAAAACCCTGTGTGGAGTATCTACTGTCAATAAAGGTTTTAGCTTTATAATGGTATCTATTGTTAAATCGACTTTAGGCCTAAATCAACACCAAAAGCTAGCTCATGAGGAGAGGATTGACCATGTCATATAAAGAGACCACCCATTCCATTAACCTCTGACGTGGAACTTCTTGACATCCCTTGGGTGGACATCTAGACCGTGAACGATTTAATATGGGGTTCCATTGTCATGAAATAAGAATTTAATTGGGTCCTGCTCTGATATGAAATGGACTTAGGCCTAGATCCACGAGACGTAATTTGCAGTTATTATATTCAAGTCTAAGAAATGTTCACTGAATCAAAGATGGTATGTAAGGAAAAGATTTGATCTTGGCATAAATATATTTGAGATGCTGGTCTGTTTAGAGTCCTTCACAGGACCAGTGCATAACGGGAGCTTAGTGCACCGAGCTGCCTTTTGTTTTTAGAGTTCTCACCATTTTTTTCTATTGTAATGGCCATCTTTTTTTGTTGAAACTGCCTTTAGCATCTCTTTTATCTGGTTTACTAACCAATAAAAAGAAAAGTTAGTATGGAAGAAAAGATTTGATCTTGGCACAAATGTAGCCAAATTGCTGGTTTATTTAGAATTCTTCGCCTACACAATTTTGTTTTGTAATGACGATCTGTTTTGGTTGCAACTGACCTCCAGCATTCTCATTTTGCTGGTTTACTAATGAAAATTGTTGATTACCGATATAAAATTAAAGATGGTATGGAAGAAAGATTTGATCTTGGCACAAATGCAGTTGAATTGCTGGTTTGTTGAGAGTTCTTCGCCTACTTGAATTATTTGAAGACTTTAGATTCGTTCTGATTAGATGTTAGGAAGGACCCTCAAGCTATGAGAGTAGAATTAAACAAAGTCAGAATTCTGGAGTGGCAAAAAACCATCAAATAGGTAGCTTAAATAGTCTTTTAATCCACATTTAACACGTAAATACTGCGTCATCATATAGTTTAATGTTTCAGTTCAGAAAGACAGGATTCAACTAGCAAAATACTCTTTGACTTGATCTTGCTATTTTTAATCCTTAGTGCTCACTTCTTACATAAAGCAAGTGGATTCATGTTTCTACACTATGGCTTCATGAAATAAGGAAGACACTTGATCATATCTTTATTTTTGTCTGTGAGAGCTGACGACTTGGCATTTTTCGTGGATTCAGTTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTGGTTAGCTTCAAATCAATCAATAATCTTTCCCAATAATTTAAGAACAAATTTCAATTATTAGTTTATCTGCCTCAAGTTCTTTCAGATGGTTATGTTCTATGCTTATTTTTGCTGCTCTTCCAACAAAATTTTAGGATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAGGTGAGTCGGCAATGCTTAATTGTTTGACTGGTGAGATGGGGAGGAGATCATATCATCTAAGTGATGCTAAAAATGATTCTATGAATTGCAGCGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATCTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGCGGTGTCTTTCAAGGGAAACCTCTTAAGAAAGAAACTTCCATATTCTTGACTTGGATTGACCCAAATAAAATGCTTGTAAGTATGCAGTTTATTTACATTATTCTCTTAAAGCCTAGATTATATCAACTTCAGGCATCAAATGTGGCTTTTGTTTTCTTCTTAGCTTTCTTAGTTCTAATTTGTTGCTCTTTTTTATGGAAATCTTAAAGGTTTCACTCTCTTTTGATGGAATGCCTTC</genome_strand>
        <mrna_strand>GCCATTTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTG......................................................................................................................................GATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAG...........................................................................................CGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATCTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGCGGTGTCTTTCAAGGGAAACCTCTTAAGAAAGAAACTTCCATATTCTTGACTTGGATTGACCCAAATAAAATGCTT......................................................................................................................................GTTTCACTCTCTTTTGATGGAATGCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250318" ref_strand="+" ref_description="SGN-E250318 [cLEG-6-D8]">
      <seq>ttcagtatggatttcaacatccacacccacaaagatcactgcttttaactccatacccagaatttgttatcctcttaaactttcaagaaatggtatttatcccttatctacatttgagagaaatggccaatacgaacaaaatctcacaatcaaagctgctgcctcctcttctgttggaagtgcagaatacacagaagaaccagctactaaggtgaaatttcaaagatcattgagcttacctggttgctctacttccttgtcattgcttggaactggatacagggaaaagatttttgcaattattggtgtcaaggtctatgctgcaggcctctatgtcaatgactccgtctttagtagcttagatgcctggcgaggacgttctgctgcagatattcaacaggatccttccttgttcaacaagatctttgaagcggatttggagaaatctttacttattgtgctggtcagagatgttgatggtaaaactttctgggatgccttagatgaagccatctctccgagaatcaaatcccctactgccgatgataagtctgctctttctacattccgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="79038" stop="76218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78738" g_stop="78566" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78565" i_stop="77141" i_length="1425">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.461" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77140" g_stop="77039" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="275" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77038" i_stop="76905" i_length="134">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.806" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76904" g_stop="76749" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="431" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76748" i_stop="76658" i_length="91">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76657" g_stop="76518" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="571" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E250318" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78738" e_stop="78566"/>
          <exon e_start="77140" e_stop="77039"/>
          <exon e_start="76904" e_stop="76749"/>
          <exon e_start="76657" e_stop="76518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTGGTAATAATTCAACTGATTCTTGTAACAAGTTTAAGTCTTTATGTCTAACTTACTATTAGTAGATTTTAAGCTGAATTTTACATCTTTTGTGCAAAAGTGGAAGGAAACCCTTTAAACTGAATACTTACTAAATTTCAGATTGTGGGTATTCTTGGTTTCTTGAATTTTTACTAAATGTTTATACAAATCTGATGTTTGCCATAATTTAGTGAGAAAACCCTGTGTGGAGTATCTACTGTCAATAAAGGTTTTAGCTTTATAATGGTATCTATTGTTAAATCGACTTTAGGCCTAAATCAACACCAAAAGCTAGCTCATGAGGAGAGGATTGACCATGTCATATAAAGAGACCACCCATTCCATTAACCTCTGACGTGGAACTTCTTGACATCCCTTGGGTGGACATCTAGACCGTGAACGATTTAATATGGGGTTCCATTGTCATGAAATAAGAATTTAATTGGGTCCTGCTCTGATATGAAATGGACTTAGGCCTAGATCCACGAGACGTAATTTGCAGTTATTATATTCAAGTCTAAGAAATGTTCACTGAATCAAAGATGGTATGTAAGGAAAAGATTTGATCTTGGCATAAATATATTTGAGATGCTGGTCTGTTTAGAGTCCTTCACAGGACCAGTGCATAACGGGAGCTTAGTGCACCGAGCTGCCTTTTGTTTTTAGAGTTCTCACCATTTTTTTCTATTGTAATGGCCATCTTTTTTTGTTGAAACTGCCTTTAGCATCTCTTTTATCTGGTTTACTAACCAATAAAAAGAAAAGTTAGTATGGAAGAAAAGATTTGATCTTGGCACAAATGTAGCCAAATTGCTGGTTTATTTAGAATTCTTCGCCTACACAATTTTGTTTTGTAATGACGATCTGTTTTGGTTGCAACTGACCTCCAGCATTCTCATTTTGCTGGTTTACTAATGAAAATTGTTGATTACCGATATAAAATTAAAGATGGTATGGAAGAAAGATTTGATCTTGGCACAAATGCAGTTGAATTGCTGGTTTGTTGAGAGTTCTTCGCCTACTTGAATTATTTGAAGACTTTAGATTCGTTCTGATTAGATGTTAGGAAGGACCCTCAAGCTATGAGAGTAGAATTAAACAAAGTCAGAATTCTGGAGTGGCAAAAAACCATCAAATAGGTAGCTTAAATAGTCTTTTAATCCACATTTAACACGTAAATACTGCGTCATCATATAGTTTAATGTTTCAGTTCAGAAAGACAGGATTCAACTAGCAAAATACTCTTTGACTTGATCTTGCTATTTTTAATCCTTAGTGCTCACTTCTTACATAAAGCAAGTGGATTCATGTTTCTACACTATGGCTTCATGAAATAAGGAAGACACTTGATCATATCTTTATTTTTGTCTGTGAGAGCTGACGACTTGGCATTTTTCGTGGATTCAGTTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTGGTTAGCTTCAAATCAATCAATAATCTTTCCCAATAATTTAAGAACAAATTTCAATTATTAGTTTATCTGCCTCAAGTTCTTTCAGATGGTTATGTTCTATGCTTATTTTTGCTGCTCTTCCAACAAAATTTTAGGATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAGGTGAGTCGGCAATGCTTAATTGTTTGACTGGTGAGATGGGGAGGAGATCATATCATCTAAGTGATGCTAAAAATGATTCTATGAATTGCAGCGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATCTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGC</genome_strand>
        <mrna_strand>TTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTG......................................................................................................................................GATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAG...........................................................................................CGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATCTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306257" ref_strand="+" ref_description="SGN-E306257 [cLEY-13-N12]">
      <seq>ttaaactttcaagaaatggtatttatcccttatctacatttgagagaaatggccaatacgaacaaaatctcacaatcaaagctgctgcctcctcttctgttggaagtgcagaatacacagaagaaccagctactaaggtgaaatttcaaagatcatggagcttacctggttgctctacttccttgtcattgcttggaactggatacagggaaaagatttttgcaattattgatgtcaaagtctatgctgcaggcctctatgtcaatgactccgtctttagtagcttagatgcctggcgaggacgttctgctgcagatattcaacaggatccttccttgttcaacaagatctttgaagcggatttggagaaatctttacttattgtgctggtcagagatgttgatggtaaaactttctgggatgccttagatgaagcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="78964" stop="76277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78664" g_stop="78566" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78565" i_stop="77141" i_length="1425">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.461" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77140" g_stop="77039" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="201" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77038" i_stop="76905" i_length="134">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.806" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76904" g_stop="76749" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="357" r_length="156" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76748" i_stop="76658" i_length="91">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76657" g_stop="76577" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="438" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E306257" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78664" e_stop="78566"/>
          <exon e_start="77140" e_stop="77039"/>
          <exon e_start="76904" e_stop="76749"/>
          <exon e_start="76657" e_stop="76577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTGGTAATAATTCAACTGATTCTTGTAACAAGTTTAAGTCTTTATGTCTAACTTACTATTAGTAGATTTTAAGCTGAATTTTACATCTTTTGTGCAAAAGTGGAAGGAAACCCTTTAAACTGAATACTTACTAAATTTCAGATTGTGGGTATTCTTGGTTTCTTGAATTTTTACTAAATGTTTATACAAATCTGATGTTTGCCATAATTTAGTGAGAAAACCCTGTGTGGAGTATCTACTGTCAATAAAGGTTTTAGCTTTATAATGGTATCTATTGTTAAATCGACTTTAGGCCTAAATCAACACCAAAAGCTAGCTCATGAGGAGAGGATTGACCATGTCATATAAAGAGACCACCCATTCCATTAACCTCTGACGTGGAACTTCTTGACATCCCTTGGGTGGACATCTAGACCGTGAACGATTTAATATGGGGTTCCATTGTCATGAAATAAGAATTTAATTGGGTCCTGCTCTGATATGAAATGGACTTAGGCCTAGATCCACGAGACGTAATTTGCAGTTATTATATTCAAGTCTAAGAAATGTTCACTGAATCAAAGATGGTATGTAAGGAAAAGATTTGATCTTGGCATAAATATATTTGAGATGCTGGTCTGTTTAGAGTCCTTCACAGGACCAGTGCATAACGGGAGCTTAGTGCACCGAGCTGCCTTTTGTTTTTAGAGTTCTCACCATTTTTTTCTATTGTAATGGCCATCTTTTTTTGTTGAAACTGCCTTTAGCATCTCTTTTATCTGGTTTACTAACCAATAAAAAGAAAAGTTAGTATGGAAGAAAAGATTTGATCTTGGCACAAATGTAGCCAAATTGCTGGTTTATTTAGAATTCTTCGCCTACACAATTTTGTTTTGTAATGACGATCTGTTTTGGTTGCAACTGACCTCCAGCATTCTCATTTTGCTGGTTTACTAATGAAAATTGTTGATTACCGATATAAAATTAAAGATGGTATGGAAGAAAGATTTGATCTTGGCACAAATGCAGTTGAATTGCTGGTTTGTTGAGAGTTCTTCGCCTACTTGAATTATTTGAAGACTTTAGATTCGTTCTGATTAGATGTTAGGAAGGACCCTCAAGCTATGAGAGTAGAATTAAACAAAGTCAGAATTCTGGAGTGGCAAAAAACCATCAAATAGGTAGCTTAAATAGTCTTTTAATCCACATTTAACACGTAAATACTGCGTCATCATATAGTTTAATGTTTCAGTTCAGAAAGACAGGATTCAACTAGCAAAATACTCTTTGACTTGATCTTGCTATTTTTAATCCTTAGTGCTCACTTCTTACATAAAGCAAGTGGATTCATGTTTCTACACTATGGCTTCATGAAATAAGGAAGACACTTGATCATATCTTTATTTTTGTCTGTGAGAGCTGACGACTTGGCATTTTTCGTGGATTCAGTTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTGGTTAGCTTCAAATCAATCAATAATCTTTCCCAATAATTTAAGAACAAATTTCAATTATTAGTTTATCTGCCTCAAGTTCTTTCAGATGGTTATGTTCTATGCTTATTTTTGCTGCTCTTCCAACAAAATTTTAGGATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAGGTGAGTCGGCAATGCTTAATTGTTTGACTGGTGAGATGGGGAGGAGATCATATCATCTAAGTGATGCTAAAAATGATTCTATGAATTGCAGCGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCA</genome_strand>
        <mrna_strand>TTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATGGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTG......................................................................................................................................GATACAGGGAAAAGATTTTTGCAATTATTGATGTCAAAGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAG...........................................................................................CGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E438758" ref_strand="+" ref_description="SGN-E438758 [cSTA-9-B19]">
      <seq>agtactattttttttcccaagaagatggcagcagctggagccatttcagtatggatttcaacatcaacacccataaagatcactgcttttaacaccaaaccaagaatttcttatcctcttaaactttcaagaaatggtatttatcccttatccacatttgagaaaaatggccaacatgaacaaaatttcacaatcaaagctgctgcctcctcttctgttggaagtgcagaatacacagaagaaccagctactaaggtgaaatttcaaagatcattcagcctacctggttgctctacttcattgtcattgcttggaactggatacagggaaaaggtttttgcaattattggtgtcaaggtctatgctgcaggcctctatgtcaatgactccgtctttagtagattagatgcctggcgaggacgttctgctgcagatattcaacaggatccttccttattcaacaagatctttgaagccgatctggagaaatctttactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="79078" stop="76334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78760" g_stop="78566" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="217" r_length="195" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78565" i_stop="77141" i_length="1425">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.461" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77140" g_stop="77039" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="319" r_length="102" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77038" i_stop="76905" i_length="134">
            <donor d_prob="0.967" d_score="0.94"/>
            <acceptor a_prob="0.806" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76904" g_stop="76749" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="475" r_length="156" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76748" i_stop="76658" i_length="91">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.877" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76657" g_stop="76634" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="499" r_length="24" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E438758" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78760" e_stop="78566"/>
          <exon e_start="77140" e_stop="77039"/>
          <exon e_start="76904" e_stop="76749"/>
          <exon e_start="76657" e_stop="76634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGCAGCAGCTGGAGCCATTTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTGGTAATAATTCAACTGATTCTTGTAACAAGTTTAAGTCTTTATGTCTAACTTACTATTAGTAGATTTTAAGCTGAATTTTACATCTTTTGTGCAAAAGTGGAAGGAAACCCTTTAAACTGAATACTTACTAAATTTCAGATTGTGGGTATTCTTGGTTTCTTGAATTTTTACTAAATGTTTATACAAATCTGATGTTTGCCATAATTTAGTGAGAAAACCCTGTGTGGAGTATCTACTGTCAATAAAGGTTTTAGCTTTATAATGGTATCTATTGTTAAATCGACTTTAGGCCTAAATCAACACCAAAAGCTAGCTCATGAGGAGAGGATTGACCATGTCATATAAAGAGACCACCCATTCCATTAACCTCTGACGTGGAACTTCTTGACATCCCTTGGGTGGACATCTAGACCGTGAACGATTTAATATGGGGTTCCATTGTCATGAAATAAGAATTTAATTGGGTCCTGCTCTGATATGAAATGGACTTAGGCCTAGATCCACGAGACGTAATTTGCAGTTATTATATTCAAGTCTAAGAAATGTTCACTGAATCAAAGATGGTATGTAAGGAAAAGATTTGATCTTGGCATAAATATATTTGAGATGCTGGTCTGTTTAGAGTCCTTCACAGGACCAGTGCATAACGGGAGCTTAGTGCACCGAGCTGCCTTTTGTTTTTAGAGTTCTCACCATTTTTTTCTATTGTAATGGCCATCTTTTTTTGTTGAAACTGCCTTTAGCATCTCTTTTATCTGGTTTACTAACCAATAAAAAGAAAAGTTAGTATGGAAGAAAAGATTTGATCTTGGCACAAATGTAGCCAAATTGCTGGTTTATTTAGAATTCTTCGCCTACACAATTTTGTTTTGTAATGACGATCTGTTTTGGTTGCAACTGACCTCCAGCATTCTCATTTTGCTGGTTTACTAATGAAAATTGTTGATTACCGATATAAAATTAAAGATGGTATGGAAGAAAGATTTGATCTTGGCACAAATGCAGTTGAATTGCTGGTTTGTTGAGAGTTCTTCGCCTACTTGAATTATTTGAAGACTTTAGATTCGTTCTGATTAGATGTTAGGAAGGACCCTCAAGCTATGAGAGTAGAATTAAACAAAGTCAGAATTCTGGAGTGGCAAAAAACCATCAAATAGGTAGCTTAAATAGTCTTTTAATCCACATTTAACACGTAAATACTGCGTCATCATATAGTTTAATGTTTCAGTTCAGAAAGACAGGATTCAACTAGCAAAATACTCTTTGACTTGATCTTGCTATTTTTAATCCTTAGTGCTCACTTCTTACATAAAGCAAGTGGATTCATGTTTCTACACTATGGCTTCATGAAATAAGGAAGACACTTGATCATATCTTTATTTTTGTCTGTGAGAGCTGACGACTTGGCATTTTTCGTGGATTCAGTTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTGGTTAGCTTCAAATCAATCAATAATCTTTCCCAATAATTTAAGAACAAATTTCAATTATTAGTTTATCTGCCTCAAGTTCTTTCAGATGGTTATGTTCTATGCTTATTTTTGCTGCTCTTCCAACAAAATTTTAGGATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAGGTGAGTCGGCAATGCTTAATTGTTTGACTGGTGAGATGGGGAGGAGATCATATCATCTAAGTGATGCTAAAAATGATTCTATGAATTGCAGCGGATTTGGAGAAATCTTTACTTA</genome_strand>
        <mrna_strand>AGATGGCAGCAGCTGGAGCCATTTCAGTATGGATTTCAACATCAACACCCATAAAGATCACTGCTTTTAACACCAAACCAAGAATTTCTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCCACATTTGAGAAAAATGGCCAACATGAACAAAATTTCACAATCAAAGCTGCTGCCTCCTCTTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTCAGCCTACCTGGTTGCTCTACTTCATTGTCATTGCTTGGAACTG......................................................................................................................................GATACAGGGAAAAGGTTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGATTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTATTCAACAAGATCTTTGAAG...........................................................................................CCGATCTGGAGAAATCTTTACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E263614" ref_strand="+" ref_description="SGN-E263614 [cLEG-60-H2]">
      <seq>aattttaggagttgaaacacagcccaactgtctttttcttccattttctgtcacttaatcagaccaaagactccattttttatgtggttcttttttatccactcaattatttcttcttgggacaggatataaaagcacacccaagtgttcaaattgtttccatagtagttttctgttcttttttgcctattggggtgtcgaaaaaagcaatcttgaagcattgcaaggcaaaaaaatttggtgatttagctaagtgggtgttacaaagatgatgtctgtgacttgccataatcttgaaattgggagaaccccattggagtctttggcttgtggctgttctttttcaaagggtgttttgagaaatgtaagtagaagattcagtgggaagaagttgttgtcttgcagacaagaatttgggcgtatttcaactaaggcttcacttactgggttggcaccagttttggatttgaataagtcagaaaaacctatttcattgactaatgtttttgaagtggttgcggatgacctacttacgttaaacaagaacttgcataatattgttggtgcagagaacccagttttaatgtctgcagctgagcagatttttggtgctggtggcaaaaaggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaagttagctgaaatcattgaaatgatccatactgccagcttgataaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91437" stop="94126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91737" g_stop="92181" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92393" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="556" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92394" i_stop="93536" i_length="1143">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93537" g_stop="93664" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="684" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93753" g_stop="93826" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="758" r_length="74" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E263614" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91737" e_stop="92181"/>
          <exon e_start="92284" e_stop="92393"/>
          <exon e_start="93537" e_stop="93664"/>
          <exon e_start="93753" e_stop="93826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTAGGAGTTGAAACACAGCCCAACTGTCTTTTTCTTCCATTTTCTGTCACTTAATCAGACCAAAGACTCCATTTTTTATGTGGTTCTTTTTTATCCACTCAATTATTTCTTCTTGGGACAGGATATAAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGC-AAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAATGTGAGTAATCTGTTGACACTGTTTGATTAATCAATCTTTCATGTTTCAACTTTTCCTTATGTTTTTTTCCAGCTATATAGCTTAATGGATTATATGTGATAAAATCTTATTTTTAGACTAATAGCTGCCAAGGTAATACAATAATTATTTATCTGGTATGATTCGGAACACGTTCCTTTCGCTTTATTACTGCTGGTATTGTCAAATGACTAATGTACTATTCATAATTTAACTTCATTGATGCTTGGTCGAGTTGTTCCTTTTAACGAAGTGCTCTAGATGTAAGAGAGAGGTACAATTTTGGACTAGTGGTGATGCTAGTGGGGATTCAAATCAATAGAGATGCTTATTTGATGATATTTGTGTTTATTGGCCTTACTAGAATTAACATATAAGGGGAACAGGAGTTGCAGTATCACTCTGCCAAATGATATCTTAATCTTGGAACATTTGTGAGGATGGTTTTATTTGGTATTTGGTCATGGTTTGATTCAAATACCAGATAACTGATGGTTGTACTTGTCGTTGTGACTTCAATGATTCTAAGGTGAACAACTGCTAAGGTGAATATACTTTGTTCTCGAGTGAACTGCTTTATATGTATGAGAGGTGCAATTTTTGGACTAACAAATGGTCATGGAGGATAAACAACCGGACTTAATAGATATATTTATTTGTCCGGGTTATTGGCCTTAAAAAATCTAACTGTAGGAGTAAGAGCTACACAATTACTTCCAAATGGTATCTATAATTTGGATGATGATGGTGTTCGGGCCAGCATGTGTACACCTCAACTATTCTACCTGGTTACCTTCTAACTCCCATTGGCACAGGTACCTTGACCTTGAGCTTATGAAGTTCATTTTAAAAGGTCCTAGCTTTTTGACAATTTCATTTACTTTGATTCAAAGACTTGATACAAGAAATAATTGCAGTTGGGCCTGAGAGTATCTCAAACGTATATCCTGATAAATAAATACACATAACTGAAAAAGTTTCATATTGTCACTTGCTATTATTAGAATTTGTAAAATATGTGGTTAATTGGATCAATACCACATGAATGTTCAGATGGCATATCAGGCCAATTTACTTTTAACATATCTCTATTCTATTCTGTATCTAAGAGAAATCATTTTTCAGATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATG</genome_strand>
        <mrna_strand>AATTTTAGGAGTTGAAACACAGCCCAACTGTCTTTTTCTTCCATTTTCTGTCACTTAATCAGACCAAAGACTCCATTTTTTATGTGGTTCTTTTTTATCCACTCAATTATTTCTTCTTGGGACAGGATATAAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAAGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAAGTTAGCTGAAATCATTGAAATGATCCATACTGCCAGCTTGATAAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264315" ref_strand="+" ref_description="SGN-E264315 [cLEG-70-P13]">
      <seq>tttaggagttgaaacacagcccaactgtctttttcttccattttctgtcacttaatcagaccaaagactccattttttatgtggttcttttttatccactcaattatttcttcttgggacaggatataaaagcacacccaagtgttcaaattgtttccatagtagttttctgttcttttttgcctattggggtgtcgaaaaaagcaatcttgaagcattgcaaggcaaaaaaatttggtgatttagctaagtgggtgttacaaagatgatgtctgtgacttgccataatcttgaaattgggagaaccccattggagtctttggcttgtggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91440" stop="92371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91740" g_stop="92071" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E264315" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91740" e_stop="92071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGGAGTTGAAACACAGCCCAACTGTCTTTTTCTTCCATTTTCTGTCACTTAATCAGACCAAAGACTCCATTTTTTATGTGGTTCTTTTTTATCCACTCAATTATTTCTTCTTGGGACAGGATATAAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGC-AAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTG</genome_strand>
        <mrna_strand>TTTAGGAGTTGAAACACAGCCCAACTGTCTTTTTCTTCCATTTTCTGTCACTTAATCAGACCAAAGACTCCATTTTTTATGTGGTTCTTTTTTATCCACTCAATTATTTCTTCTTGGGACAGGATATAAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413990" ref_strand="+" ref_description="SGN-E413990 [STM-18-D2]">
      <seq>aaaagcacacccaagtgttcaaattgttgccatatcagttttctgttcttttttgcctattggggtgtcgaaaaaagcaatcttgaagctttacaaggcaaaatttggtgatttagctaagtgggtattacaaagatgatgtctgtgagttgccataatcttgaaattgggagaaccccattggagtctttggcttgtgggtgttctttttcaaagggtgttttgagaaatgtaagtagaagattcaatgggaagaagttgttgtcttgcagacaagaatttgggcgtatctcaactaaggcttcacttactgggttggcaccagttttggatttgaataagtcagcaaagcctatttcattgactaatgtttttgaagtggttgctgatgacctacttacattaaacaagaacttgcagaatattgttggtgcagagaacccagttttgatgtctgcagctgaacagatttttggtgctggtggcaaaagggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaaacacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactgttcaccaattatatggtactagagtggcagtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91567" stop="95523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91867" g_stop="92181" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92393" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="423" r_length="110" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92394" i_stop="93536" i_length="1143">
            <donor d_prob="0.946" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93537" g_stop="93664" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="551" r_length="128" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="655" r_length="104" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95178" g_stop="95223" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="701" r_length="46" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E413990" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91867" e_stop="92181"/>
          <exon e_start="92284" e_stop="92393"/>
          <exon e_start="93537" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAATGTGAGTAATCTGTTGACACTGTTTGATTAATCAATCTTTCATGTTTCAACTTTTCCTTATGTTTTTTTCCAGCTATATAGCTTAATGGATTATATGTGATAAAATCTTATTTTTAGACTAATAGCTGCCAAGGTAATACAATAATTATTTATCTGGTATGATTCGGAACACGTTCCTTTCGCTTTATTACTGCTGGTATTGTCAAATGACTAATGTACTATTCATAATTTAACTTCATTGATGCTTGGTCGAGTTGTTCCTTTTAACGAAGTGCTCTAGATGTAAGAGAGAGGTACAATTTTGGACTAGTGGTGATGCTAGTGGGGATTCAAATCAATAGAGATGCTTATTTGATGATATTTGTGTTTATTGGCCTTACTAGAATTAACATATAAGGGGAACAGGAGTTGCAGTATCACTCTGCCAAATGATATCTTAATCTTGGAACATTTGTGAGGATGGTTTTATTTGGTATTTGGTCATGGTTTGATTCAAATACCAGATAACTGATGGTTGTACTTGTCGTTGTGACTTCAATGATTCTAAGGTGAACAACTGCTAAGGTGAATATACTTTGTTCTCGAGTGAACTGCTTTATATGTATGAGAGGTGCAATTTTTGGACTAACAAATGGTCATGGAGGATAAACAACCGGACTTAATAGATATATTTATTTGTCCGGGTTATTGGCCTTAAAAAATCTAACTGTAGGAGTAAGAGCTACACAATTACTTCCAAATGGTATCTATAATTTGGATGATGATGGTGTTCGGGCCAGCATGTGTACACCTCAACTATTCTACCTGGTTACCTTCTAACTCCCATTGGCACAGGTACCTTGACCTTGAGCTTATGAAGTTCATTTTAAAAGGTCCTAGCTTTTTGACAATTTCATTTACTTTGATTCAAAGACTTGATACAAGAAATAATTGCAGTTGGGCCTGAGAGTATCTCAAACGTATATCCTGATAAATAAATACACATAACTGAAAAAGTTTCATATTGTCACTTGCTATTATTAGAATTTGTAAAATATGTGGTTAATTGGATCAATACCACATGAATGTTCAGATGGCATATCAGGCCAATTTACTTTTAACATATCTCTATTCTATTCTGTATCTAAGAGAAATCATTTTTCAGATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACT</genome_strand>
        <mrna_strand>AAAAGCACACCCAAGTGTTCAAATTGTTGCCATATCAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCTTTACAAGGC--AAAATTTGGTGATTTAGCTAAGTGGGTATTACAAAGATGATGTCTGTGAGTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGGTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAATGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATCTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGCAAAGCCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCTGATGACCTACTTACATTAAACAAGAACTTGCAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGGTGCAGAGAACCCAGTTTTGATGTCTGCAGCTGAACAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAAACACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTGTTCACCAATTATATGGTACTAGAGTGGCAGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473032" ref_strand="+" ref_description="SGN-E473032 [cSTB-30-J4]">
      <seq>aaaagcacacccaagtgttcaaattggtgccatatcagttttctgttcttttttgcctattggggtgtcgaaaaaagcaatcttgaagctttacaaggcaaaatttggtgatttagctaagtgggtattacaaagatgatgtctgtgacttgccataatcttgaaattgggagaaccccattggagtctttggcttgtgggtgttctttttcaaagggtgttttgagaaatgtaagttgaagattcaatgggaagaagttgttgtcttgcagacaagaatttgggcgtatctcaactaaggcttcacttactgggttggcaccagatttggatttgaataaatcagcaaagcctatttcattgactaatgtttttgaagtggttgctgatgacctacttacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91567" stop="92673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91867" g_stop="92181" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92373" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="403" r_length="90" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E473032" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91867" e_stop="92181"/>
          <exon e_start="92284" e_stop="92373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGT</genome_strand>
        <mrna_strand>AAAAGCACACCCAAGTGTTCAAATTGGTGCCATATCAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCTTTACAAGGC--AAAATTTGGTGATTTAGCTAAGTGGGTATTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGGTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTTGAAGATTCAATGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATCTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGATTTGGATTTGAATAAATCAGCAAAGCCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCTGATGACCTACTTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409709" ref_strand="+" ref_description="SGN-E409709 [PPI-14-J10]">
      <seq>gttttttttttttttttttgcctattggggtgtcgaaaaaagcaatcttgaagctttacaaggcaaaatctggtgatttagctcagtgggtattacaaagatgatgtctgtgagttgccataatcttgaaattgggagaaccccattggagtctttggcttgtgggtgttctttttcaaagggtgttttgagaaatgtaagtagaagattcaatgggaagaagttgttgtcttgcagacaagaatttgggcgtatctcaactaaggcttcacttactgggttggcaccagttttggatttgaataagtcagcaaagcctatttcattgactaatgtttttgaagtggttgctgatgacctactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91605" stop="92670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91901" g_stop="92181" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92370" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="365" r_length="87" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E409709" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E409709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91901" e_stop="92181"/>
          <exon e_start="92284" e_stop="92370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTA</genome_strand>
        <mrna_strand>GT-TTTTTTTTTTTTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCTTTACAAGGC--AAAATCTGGTGATTTAGCTCAGTGGGTATTACAAAGATGATGTCTGTGAGTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGGTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAATGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATCTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGCAAAGCCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCTGATGACCTACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332791" ref_strand="+" ref_description="SGN-E332791 [cTOD-18-J5]">
      <seq>ttttttgcctattggggtgtcgaaaaaagcaatcttgaagcattgcaaggcaaaaaatttggtgatttagctaagtgggtgttacaaagatgatgtctgtgacttgccataatcttgaaattgggagaaccccattggagtctttggcttgtggctgttctttttcaaagggtgttttgagaaatgtaagtagaagattcagtgggaagaagttgttgtcttgcagacaagaatttgggcgtatttcaactaaggcttcacttactgggttggcaccagttttggatttgaataagtcagaaaaacctatttcattgactaatggtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91615" stop="92645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91915" g_stop="92181" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92345" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="329" r_length="62" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E332791" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>329</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91915" e_stop="92181"/>
          <exon e_start="92284" e_stop="92345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTT</genome_strand>
        <mrna_strand>TTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203544" ref_strand="+" ref_description="SGN-E203544 [cLEC-15-H9]">
      <seq>aaaaagcaatcttgaagcattgcaaggcaaaaaatttggtgatttagctaagtgggtgttacaaagatgatgtctgtgacttgccataatcttgaaattgggagaaccccattggagtctttggcttgtggctgttctttttcaaagggtgttttgagaaatgtaagtagaagattcagtgggaagaagttgttgtcttgcagacaagaatttgggcgtatttcaactaaggcttcacttactgggttggcaccagttttggatttgaataagtcagaaaaacctatttcattgactaatgtttttgaagtggttgcggatgacctacttacgttaaacaagaacttgcataatattgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91638" stop="92695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91938" g_stop="92181" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92393" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="354" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E203544" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91938" e_stop="92181"/>
          <exon e_start="92284" e_stop="92393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAAT</genome_strand>
        <mrna_strand>AAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253303" ref_strand="+" ref_description="SGN-E253303 [cLEG-26-D7]">
      <seq>tttttcaaagggtgttttgagaaatgtaagtagaagattcagtgggaagaagttgttgtcttgcagacaagaatttgggcgtatttcaactaaggcttcacttactgggttggcaccagttttggatttgaataagtcagaaaaacctatttcattgactaatgtttttgaagtggttgcggatgacctacttacgttaaacaagaacttgcataatattgttggtgcagagaacccagttttaatgtcggcagctgagcagatttttggtgctggtggcaaaagggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91775" stop="95603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92075" g_stop="92181" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92284" g_stop="92393" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="217" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92394" i_stop="93536" i_length="1143">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93537" g_stop="93664" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="345" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="449" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95178" g_stop="95303" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="575" r_length="126" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E253303" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92075" e_stop="92181"/>
          <exon e_start="92284" e_stop="92393"/>
          <exon e_start="93537" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTGGTATATAGTTAAATTCAATATTTTTAAGGATTACAGTTTATAAGGGTATTCTTGGAATGATTTAAATTTTGAAATTTTGTTGTTGTTGTGGTTGTGTTGCAGGGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAATGTGAGTAATCTGTTGACACTGTTTGATTAATCAATCTTTCATGTTTCAACTTTTCCTTATGTTTTTTTCCAGCTATATAGCTTAATGGATTATATGTGATAAAATCTTATTTTTAGACTAATAGCTGCCAAGGTAATACAATAATTATTTATCTGGTATGATTCGGAACACGTTCCTTTCGCTTTATTACTGCTGGTATTGTCAAATGACTAATGTACTATTCATAATTTAACTTCATTGATGCTTGGTCGAGTTGTTCCTTTTAACGAAGTGCTCTAGATGTAAGAGAGAGGTACAATTTTGGACTAGTGGTGATGCTAGTGGGGATTCAAATCAATAGAGATGCTTATTTGATGATATTTGTGTTTATTGGCCTTACTAGAATTAACATATAAGGGGAACAGGAGTTGCAGTATCACTCTGCCAAATGATATCTTAATCTTGGAACATTTGTGAGGATGGTTTTATTTGGTATTTGGTCATGGTTTGATTCAAATACCAGATAACTGATGGTTGTACTTGTCGTTGTGACTTCAATGATTCTAAGGTGAACAACTGCTAAGGTGAATATACTTTGTTCTCGAGTGAACTGCTTTATATGTATGAGAGGTGCAATTTTTGGACTAACAAATGGTCATGGAGGATAAACAACCGGACTTAATAGATATATTTATTTGTCCGGGTTATTGGCCTTAAAAAATCTAACTGTAGGAGTAAGAGCTACACAATTACTTCCAAATGGTATCTATAATTTGGATGATGATGGTGTTCGGGCCAGCATGTGTACACCTCAACTATTCTACCTGGTTACCTTCTAACTCCCATTGGCACAGGTACCTTGACCTTGAGCTTATGAAGTTCATTTTAAAAGGTCCTAGCTTTTTGACAATTTCATTTACTTTGATTCAAAGACTTGATACAAGAAATAATTGCAGTTGGGCCTGAGAGTATCTCAAACGTATATCCTGATAAATAAATACACATAACTGAAAAAGTTTCATATTGTCACTTGCTATTATTAGAATTTGTAAAATATGTGGTTAATTGGATCAATACCACATGAATGTTCAGATGGCATATCAGGCCAATTTACTTTTAACATATCTCTATTCTATTCTGTATCTAAGAGAAATCATTTTTCAGATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTC</genome_strand>
        <mrna_strand>TTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTG......................................................................................................GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGGTGCAGAGAACCCAGTTTTAATGTCGGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257335" ref_strand="+" ref_description="SGN-E257335 [cLEG-46-P16]">
      <seq>tttggatttgaataagtcagaaaaacctatttcattgactaatgtttttgaagtggttgcggatgacctacttacgttaaacaagaacttgcataatattgttggtgcagagaacccagttttaatgtctgcagctgagcagatttttggtgctggtggcaaaagggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatattttgctcagagttactatnaaacggccctcttgattgctgcaagcaccaaaggagctgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91997" stop="95843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92297" g_stop="92393" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92394" i_stop="93536" i_length="1143">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93537" g_stop="93664" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="225" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="329" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="457" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95405" g_stop="95543" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="596" r_length="139" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E257335" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92297" e_stop="92393"/>
          <exon e_start="93537" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAATGTGAGTAATCTGTTGACACTGTTTGATTAATCAATCTTTCATGTTTCAACTTTTCCTTATGTTTTTTTCCAGCTATATAGCTTAATGGATTATATGTGATAAAATCTTATTTTTAGACTAATAGCTGCCAAGGTAATACAATAATTATTTATCTGGTATGATTCGGAACACGTTCCTTTCGCTTTATTACTGCTGGTATTGTCAAATGACTAATGTACTATTCATAATTTAACTTCATTGATGCTTGGTCGAGTTGTTCCTTTTAACGAAGTGCTCTAGATGTAAGAGAGAGGTACAATTTTGGACTAGTGGTGATGCTAGTGGGGATTCAAATCAATAGAGATGCTTATTTGATGATATTTGTGTTTATTGGCCTTACTAGAATTAACATATAAGGGGAACAGGAGTTGCAGTATCACTCTGCCAAATGATATCTTAATCTTGGAACATTTGTGAGGATGGTTTTATTTGGTATTTGGTCATGGTTTGATTCAAATACCAGATAACTGATGGTTGTACTTGTCGTTGTGACTTCAATGATTCTAAGGTGAACAACTGCTAAGGTGAATATACTTTGTTCTCGAGTGAACTGCTTTATATGTATGAGAGGTGCAATTTTTGGACTAACAAATGGTCATGGAGGATAAACAACCGGACTTAATAGATATATTTATTTGTCCGGGTTATTGGCCTTAAAAAATCTAACTGTAGGAGTAAGAGCTACACAATTACTTCCAAATGGTATCTATAATTTGGATGATGATGGTGTTCGGGCCAGCATGTGTACACCTCAACTATTCTACCTGGTTACCTTCTAACTCCCATTGGCACAGGTACCTTGACCTTGAGCTTATGAAGTTCATTTTAAAAGGTCCTAGCTTTTTGACAATTTCATTTACTTTGATTCAAAGACTTGATACAAGAAATAATTGCAGTTGGGCCTGAGAGTATCTCAAACGTATATCCTGATAAATAAATACACATAACTGAAAAAGTTTCATATTGTCACTTGCTATTATTAGAATTTGTAAAATATGTGGTTAATTGGATCAATACCACATGAATGTTCAGATGGCATATCAGGCCAATTTACTTTTAACATATCTCTATTCTATTCTGTATCTAAGAGAAATCATTTTTCAGATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATA-TTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCA</genome_strand>
        <mrna_strand>TTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTTGCTC-AGAGTTACTATNAAACGGCCCTCTTGATTGCTGCAAGCACCAAAGGAGCTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E471556" ref_strand="+" ref_description="SGN-E471556 [cSTB-24-M12]">
      <seq>tggatttgaataagtcagcagagcctatttcattgactaatgtttttgaagtggttgctgatgacctacttacattaaacaagaacttgcagaatattgttggtgcagagaacccagttttgatgtctgcagctgagcagatttttggtgctggtggcaaaagggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaaacacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactgttcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="91999" stop="95581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92299" g_stop="92393" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92394" i_stop="93536" i_length="1143">
            <donor d_prob="0.946" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93537" g_stop="93664" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="223" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="327" r_length="104" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95178" g_stop="95281" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="431" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E471556" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E471556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92299" e_stop="92393"/>
          <exon e_start="93537" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAATGTGAGTAATCTGTTGACACTGTTTGATTAATCAATCTTTCATGTTTCAACTTTTCCTTATGTTTTTTTCCAGCTATATAGCTTAATGGATTATATGTGATAAAATCTTATTTTTAGACTAATAGCTGCCAAGGTAATACAATAATTATTTATCTGGTATGATTCGGAACACGTTCCTTTCGCTTTATTACTGCTGGTATTGTCAAATGACTAATGTACTATTCATAATTTAACTTCATTGATGCTTGGTCGAGTTGTTCCTTTTAACGAAGTGCTCTAGATGTAAGAGAGAGGTACAATTTTGGACTAGTGGTGATGCTAGTGGGGATTCAAATCAATAGAGATGCTTATTTGATGATATTTGTGTTTATTGGCCTTACTAGAATTAACATATAAGGGGAACAGGAGTTGCAGTATCACTCTGCCAAATGATATCTTAATCTTGGAACATTTGTGAGGATGGTTTTATTTGGTATTTGGTCATGGTTTGATTCAAATACCAGATAACTGATGGTTGTACTTGTCGTTGTGACTTCAATGATTCTAAGGTGAACAACTGCTAAGGTGAATATACTTTGTTCTCGAGTGAACTGCTTTATATGTATGAGAGGTGCAATTTTTGGACTAACAAATGGTCATGGAGGATAAACAACCGGACTTAATAGATATATTTATTTGTCCGGGTTATTGGCCTTAAAAAATCTAACTGTAGGAGTAAGAGCTACACAATTACTTCCAAATGGTATCTATAATTTGGATGATGATGGTGTTCGGGCCAGCATGTGTACACCTCAACTATTCTACCTGGTTACCTTCTAACTCCCATTGGCACAGGTACCTTGACCTTGAGCTTATGAAGTTCATTTTAAAAGGTCCTAGCTTTTTGACAATTTCATTTACTTTGATTCAAAGACTTGATACAAGAAATAATTGCAGTTGGGCCTGAGAGTATCTCAAACGTATATCCTGATAAATAAATACACATAACTGAAAAAGTTTCATATTGTCACTTGCTATTATTAGAATTTGTAAAATATGTGGTTAATTGGATCAATACCACATGAATGTTCAGATGGCATATCAGGCCAATTTACTTTTAACATATCTCTATTCTATTCTGTATCTAAGAGAAATCATTTTTCAGATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTT</genome_strand>
        <mrna_strand>TGGATTTGAATAAGTCAGCAGAGCCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCTGATGACCTACTTACATTAAACAAGAACTTGCAGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTGGTGCAGAGAACCCAGTTTTGATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAAACACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTGTTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273599" ref_strand="+" ref_description="SGN-E273599 [cLEN-6-E3]">
      <seq>caaaagggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93299" stop="96022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93599" g_stop="93664" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="170" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="298" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95722" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="616" r_length="318" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E273599" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93599" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCA</genome_strand>
        <mrna_strand>CAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257624" ref_strand="+" ref_description="SGN-E257624 [cLEG-45-H24]">
      <seq>agggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93303" stop="96024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93664" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="166" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="294" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95724" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="614" r_length="320" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E257624" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATT</genome_strand>
        <mrna_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E255418" ref_strand="+" ref_description="SGN-E255418 [cLEG-30-J14]">
      <seq>agggtgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93303" stop="95985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93664" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="166" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="294" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95685" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="575" r_length="281" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E255418" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTT</genome_strand>
        <mrna_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E254971" ref_strand="+" ref_description="SGN-E254971 [cLEG-33-L21]">
      <seq>agggtgagacctgctttagtgttcctagtgtcaagggccacagcggaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagaactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93303" stop="95966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93664" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.98"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="166" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="294" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95666" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="557" r_length="263" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E254971" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254971" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAG-ACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAA</genome_strand>
        <mrna_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCGGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGAACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E255774" ref_strand="+" ref_description="SGN-E255774 [cLEG-36-N4]">
      <seq>agggtgagacctgctttagtgttcctagtgtcaagggccacaggagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93303" stop="95948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93664" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.98"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="166" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="294" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95648" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="538" r_length="244" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E255774" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAAT</genome_strand>
        <mrna_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGGAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256893" ref_strand="+" ref_description="SGN-E256893 [cLEG-40-P12]">
      <seq>agggtgagacctgctttaatgttcctagagtcaagggccacagcaaaaatgtctggcttaaaggaactcaccacaaatcacagaaggttaactgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacaccccaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggcgattttatgtttgcacagacgtcctggtacctagctaaccttgaaaaccttgaagtcatcaagctcatccttcaggttattaaagactttgcaagtggtgaaataaagcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93303" stop="95742"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93603" g_stop="93664" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.94"/>
            <acceptor a_prob="0.761" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="166" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="294" r_length="128" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95442" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="332" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E256893" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256893" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93603" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95442"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGC</genome_strand>
        <mrna_strand>AGGGTGAGACCTGCTTTAATGTTCCTAGAGTCAAGGGCCACAGCAAAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAACTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACCCCAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGCGATTTTATGTTTGCACAGACGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATCAAGCTCATCCTTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259627" ref_strand="+" ref_description="SGN-E259627 [cLEG-42-K11]">
      <seq>ggtgagacctgctttagtgttcctagtgtcaaaggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93305" stop="95968"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93605" g_stop="93664" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.98"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="164" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="292" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95668" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="556" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E259627" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93605" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95668"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAG</genome_strand>
        <mrna_strand>GGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAAGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252072" ref_strand="+" ref_description="SGN-E252072 [cLEG-8-F8]">
      <seq>tgagacctgctttagtgttcctagtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93307" stop="96015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93607" g_stop="93664" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="162" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="290" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95715" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="601" r_length="311" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E252072" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93607" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACT</genome_strand>
        <mrna_strand>TGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702539" ref_strand="+" ref_description="SGN-E702539 [FA19AA07]">
      <seq>gtgtcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatgggcacaacgatcagaacgaaagtgcttcactatgttcatatattatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93330" stop="96412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93630" g_stop="93664" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="139" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="267" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="96112" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="975" r_length="708" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E702539" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>975</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93630" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="96112"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACC</genome_strand>
        <mrna_strand>GTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGGCACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258644" ref_strand="+" ref_description="SGN-E258644 [cLEG-50-E4]">
      <seq>tcaagggccacagcagaaatgtctggcttaaaggaactcaccacaaatcacagaaggttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagcaaaccttangaatataatcgaatcagaatttcacgatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93333" stop="96077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93633" g_stop="93664" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="136" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="264" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95777" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="636" r_length="372" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E258644" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93633" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGGGCCACAGCAGAAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTG</genome_strand>
        <mrna_strand>TCAAGGGCCACAGCAGAAATGTCTGGCTTAAA........................................................................................GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAG-CAAACCTTANGAATATAATCGAATCAGAATTTCACGATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259481" ref_strand="+" ref_description="SGN-E259481 [cLEG-42-O1]">
      <seq>aaatgtctggcttaaaggaacctcaccacaaatcacagaaagttagctgaaatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93451" stop="96020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93649" g_stop="93664" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88">
            <donor d_prob="0.882" d_score="0.00"/>
            <acceptor a_prob="0.761" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93753" g_stop="93856" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="121" r_length="105" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="249" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95405" g_stop="95720" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="565" r_length="316" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E259481" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93649" e_stop="93664"/>
          <exon e_start="93753" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGTCTGGCTTAAAGTGAGGAACACTATTTGGTTTTTTTTCTCTTGTGATACTCAACAACAACATATCAGCTAAGCTAATATCTTAAAATGCTTGCTGCCAGGGAA-CTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTG</genome_strand>
        <mrna_strand>AAATGTCTGGCTTAAA........................................................................................GGAACCTCACCACAAATCACAGAAAGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371151" ref_strand="+" ref_description="SGN-E371151 [TUS-28-L17]">
      <seq>aatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93486" stop="96160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93786" g_stop="93856" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="199" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95405" g_stop="95860" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="655" r_length="456" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E371151" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371151" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93786" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95860"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGAT</genome_strand>
        <mrna_strand>AATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370734" ref_strand="+" ref_description="SGN-E370734 [TUS-28-L16]">
      <seq>aatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93486" stop="96136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93786" g_stop="93856" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="199" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95405" g_stop="95836" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="631" r_length="432" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E370734" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93786" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAA</genome_strand>
        <mrna_strand>AATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271888" ref_strand="+" ref_description="SGN-E271888 [cLEM-8-F20]">
      <seq>aatcattgaaatgatccatactgcaagcttgatacatgatgacgtgttagatgaaagtgacacacgaagaggaaaggagactattcaccaattatatggtactagagtggcagtactggctggtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaagcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaaaggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="93486" stop="96076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93786" g_stop="93856" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95178" g_stop="95305" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="199" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95405" g_stop="95776" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="571" r_length="372" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E271888" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93786" e_stop="93856"/>
          <exon e_start="95178" e_stop="95305"/>
          <exon e_start="95405" e_stop="95776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAGGTAAACCATTTTAAGCAACTTGTTATTCTCCTCTGATGCGTCTGCAAATTCACCGCCTTTAATTATTTAAAAACTCAAAATGATTATCACTCTTGCATTAATACTTTATGGCTGAAAAGGTTATTGTACATATTCAGTGGTTATTACTTTGGATATCACTCAAAATCTTCAGCTCTACCATTACTAGGAATAGGGTTATTTTCCGGGCATCGTTGCGCGTTATTGTTCTTAAAATAATAATTTTAGTACTATCTTAGGAGGAATATTTAGAAGAAAACGCTAAAGAAGATATTGTCCTCTTTCTGATTCTATGATGATACTGTGATGCATGTTCTAACTCTCTAAACAATATCAATCCTTTAAAGAATCTCATTCTGAAAATTTCAGTTGATGAAGAGTTTGTAAGGTATATCTAAAGAAAAAAGAAATAAAGATGCCCTAGAATCTACTGTGGATGCCAGACAATCTGGACAGATGATATTAACAGAATAACCAGACTTACAATGATGACAATACCTTTTATTGATTAGAACCCCCCAGTAAACTTTATTTGACACTACAACATTGGTTGGATGTGTATGAGATCTGGGCTTATCGTTTCTAAGCTATCTCTTGTGCATTTCCTAGGACTAGTTACTTATTTCTCAAGTATTTTCTAATTGTTATTGATGCTGCCCTGATTGATTTACATGAGGTTCTTGTTGTCTAACTTGATGTGGTTGACTTTCTTCTATGAAAGACGATCTCTCCTGCTCTCCCGGGGGATCCAGAGACCTTAATAACTTCAAGGGTTAGTCCAGGAAATATGCTTGATTAGCAACAGGTTATGTGATGAGGTCATTACTGTTTAAATATTCTTCCTACTTTTCATTTCGGGTTTCTGAGATCTTCTCAGCATTTATCAGATTTGTATGCTTTCTGAAAAAAATGTGAGACTCTGTACAACTGTTTTGTGAAATGGTACACTTAACAATGGATACACCAAAAAAAGAGAGAAAACTGACAAGATTGGACTAGGTATGCGCTTTCCCAGGCTTACAAAAAAGAGCAAGACTAGATTAGATCTTTGCTTTCCCAAGTTTGTAGAGACTGATAATATTAGATTGTTATTTCTACCATCAACACTTCCTTTTCCTAATAGTTTAGCTTAGATCAATTGATGATTGATTCTTTTATAGCACTTCCAAATATGAGTCCTCTGTTTGTCAATCTAATCATTTACCCTTGTTCTTCTTCTAACTTGCTTCTCTTAATCGCAATTTCTATTATACCTTCTCCTTTGCTTCTTTATATTAGCCTCCTAATAGAACTTCTAATGCAGGAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCT</genome_strand>
        <mrna_strand>AATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAAGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAAGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705525" ref_strand="+" ref_description="SGN-E705525 [FA27BF02]">
      <seq>gtgattttatgtttgcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="94929" stop="96511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95229" g_stop="95305" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95405" g_stop="96211" g_length="807"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="884" r_length="807" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E705525" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>884</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95229" e_stop="95305"/>
          <exon e_start="95405" e_stop="96211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTA</genome_strand>
        <mrna_strand>GTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371869" ref_strand="+" ref_description="SGN-E371869 [TUS-30-A10](-)">
      <seq>gtcataaagctcatcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttgttcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattcttataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95087" stop="96473"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95285" g_stop="95305" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95405" g_stop="96172" g_length="768"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="788" r_length="767" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E371869" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95285" e_stop="95305"/>
          <exon e_start="95405" e_stop="96172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATAAAGCTCATCAGTCAGGTATCATAGGTTTATACATCTTTTAGAATTGGCAACATTGATATCATTATTAGTTCGTTGTACCTCAACGCCCTTTGTGGTTATTGGTTTTTATGACAGGTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATA</genome_strand>
        <mrna_strand>GTCATAAAGCTCATCAGTCAG...................................................................................................GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTC-TTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467263" ref_strand="+" ref_description="SGN-E467263 [cSTB-44-E11]">
      <seq>gaattcggcaccgaggcagtcaggttattaaagactttgcaagtggtgaaataaagcaggcctctaacttattcgactgtgatgttggactggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgacattggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagcagcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctcttgaggaggccatcaatctggtgaagacctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccgtctagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95100" stop="96197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95405" g_stop="95897" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="516" r_length="493" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E467263" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95405" e_stop="95897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTC</genome_strand>
        <mrna_strand>GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTATTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGACATTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCAGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTTGAGGAGGCCATCAATCTGGTGAAGACCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCGTCTAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709162" ref_strand="+" ref_description="SGN-E709162 [FA42DE06]">
      <seq>cgctggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactaaagaaatttcacattacaaataatgtcatgtattagtatttactnaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95171" stop="96560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95469" g_stop="96260" g_length="792"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="792" r_length="792" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="794" polyA_stop="805"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E709162" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95469" e_stop="96260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACT</genome_strand>
        <mrna_strand>CGCTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296152" ref_strand="+" ref_description="SGN-E296152 [cLET-24-F10]">
      <seq>tggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagccacaagagtagaagctattactatagttngaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95172" stop="96416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95472" g_stop="96116" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E296152" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95472" e_stop="96116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAG-CAC-AGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATA</genome_strand>
        <mrna_strand>TGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCCACAAGAGTAGAAGCTATTACTATAGTTNGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297973" ref_strand="+" ref_description="SGN-E297973 [cLET-38-P23]">
      <seq>tggatgaatatttgctcaagagttactataaaacggcctccttgattgctgcaagcaccaaaggagctgccattttcagtgaagttggcagtgatattagtgaacaaatgtttcaatatgggaggaatcttggtttatcgttccagattgttgatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95172" stop="96270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95472" g_stop="95970" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E297973" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95472" e_stop="95970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGA</genome_strand>
        <mrna_strand>TGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271032" ref_strand="+" ref_description="SGN-E271032 [cLEM-22-B24]">
      <seq>ggaggaatcttggtttatcgttccagattgtggatgacatattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttatccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactaaagaaatttcacattacaaataatgtcatgtattagtatttactattggctttcttggatgaacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95292" stop="96583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95592" g_stop="96283" g_length="692"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="692" r_length="692" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E271032" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95592" e_stop="96283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATA</genome_strand>
        <mrna_strand>GGAGGAATCTTGGTTTATCGTTCCAGATTGTGGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTATCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590721" ref_strand="+" ref_description="SGN-E590721 [44323]">
      <seq>ggtttatcgttccagattgttgatgacatattggacttcacacaatcagcagcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaagacctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccgtctagtcctttccgagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacacaggacgaaagtatacacctttggtttattattctcttgaagctcttcatatctaacaatatctggagcatagagttgaagctattactatagtttgaatggcgatcgcgatcaggacgaaagtgcttcactatgttcatatatactcatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95303" stop="96500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95603" g_stop="96200" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E590721" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95603" e_stop="96200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAA</genome_strand>
        <mrna_strand>GGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCAGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAGACCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCGTCTAGTCCTTTCCGAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACACAGGACGAAAGTATACACCTTTGGTTTATTATTCTCTTGAAGCTCTTCATATCTAACAATATCTGGAGCATAGAGTTGAAGCTATTACTATAGTTTGAATGGCGATCGCGATCAGGACGAAAGTGCTTCACTATGTTC--ATA-TATACTCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E414950" ref_strand="-" ref_description="SGN-E414950 [STM-20-O8]">
      <seq>tccagattgttgatgacatattggacttcacacaatcagcagcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcatagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctcttgaggaggccatcaatctggtgaagacctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccgtctagtcctttccgagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacacaggacgaaagtatacacctttggtttattattctcttgaagctcttcatatctaacaatatctggagcatagagttgaagctattactatagtttgaatggcgatcgcgatcaggacgaaagtgcttcactatgttcatatactcatacaggttgtaatttttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactagagaaatttcacaattactaataatgtcatatattactatttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95313" stop="96558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95613" g_stop="96251" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="642" polyA_stop="656"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E414950" ref_strand="-">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E414950" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="95613" e_stop="96251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAA-TTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCAC-ATTACAAATAATGTCATGTATTA</genome_strand>
        <mrna_strand>TCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCAGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCA-TAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTTGAGGAGGCCATCAATCTGGTGAAGACCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCGTCTAGTCCTTTCCGAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACACAGGACGAAAGTATACACCTTTGGTTTATTATTCTCTTGAAGCTCTTCATATCTAACAATATCTGGAGCATAGAGTTGAAGCTATTACTATAGTTTGAATGGCGATCGCGATCAGGACGAAAGTGCTTCACTATGTTC----A-TATACTCATACAGGTTGTAATTTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAGAGAAATTTCACAATTACTAATAATGTCATATATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370733" ref_strand="+" ref_description="SGN-E370733 [TUS-28-L16](-)">
      <seq>tattggacttcacacaatcagccgcacaactgggaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactaaagaaatttcacattacaaataatgtcatgtattagtatttactattggctttcttggatgaacatatatgttataaattgataatacaataaacatattacaccttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95331" stop="96626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95631" g_stop="96325" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="695" r_length="695" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="696" polyA_stop="708"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E370733" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370733" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95631" e_stop="96325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</genome_strand>
        <mrna_strand>TATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371150" ref_strand="+" ref_description="SGN-E371150 [TUS-28-L17](-)">
      <seq>aatcagccgcacaactggaaaagccagctggaagtgacttagccaagggaaaccttactgcaccagtactttttgcattagagaaagagccaaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactaaagaaatttcacattacaaataatgtcatgtattagtatttactattggctttcttggatgaacatatatgttataaattgataatacaataaacatattacaccttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95346" stop="96626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95646" g_stop="96325" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="681" polyA_stop="693"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E371150" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95646" e_stop="96325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</genome_strand>
        <mrna_strand>AATCAGCCGCACAACTGGAAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413991" ref_strand="+" ref_description="SGN-E413991 [STM-18-D2]">
      <seq>acaaaactaaattggtaaatagtaatatattacttcattagtaattgtgaaatttctctagtgtacaacaacagttgaaatttgacaatttattagccaaattataaagaatgctggaacaccatattgctgtattaggaactgaaaaattacaacctgtatgagtatatgaacatagtgaagcactttcgtcctgatcgcgatcgccattcaaactatagtaatagcttcaactctatgctccagatattgttagatatgaagagcttcaagagaataataaaccaaaggtgtatactttcgtcctgtgttttcgtctattcaattctctccagattatacttcacgatttcctcaagtgctgctcggaaaggactagacggaaggcattttaggttctgcattgctaaatcagctttctcctttgccaaatcttgtgctcgttgaattcccccacaggtcttcaccagattgatggcctcctcaagagaaccagcatcgtgaaattctgattcgattatattcctaaaggttggctctttctctaatgcaaaaagtactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="-" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="96563" stop="95409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96274" g_stop="95709" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="-" ref_id="SGN-E413991" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96274" e_stop="95709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGAAAGCCAATAGTAAATACTAATACATGACATTATTTGTAA-TGTGAAATTTCTTTAGTGTACAACAACAGTTGAAATTTGACAATTTATTAGCCAAATTATAAAGAATGCTGGAACACCATATTGCTGTATTAGGAACTG-AAAATTACAACCTGTATGGGTATAATATATGAACATAGTGAAGCACTTTCGTTCTGATCGTTGTTGCCATTCAAACTATAGTAATAGCTTCTACTCTGTGCTCCAGATATTGTTAGATATGAAGAGCTTTCAGAGAATAATAAACCAAAGTTGTATAGTTTCGTCCTTTGTTTTCGTCTATTCAATTCTCTCCAGATTATACTTCACGATTTCCTCAAGTGCTGCTTGAAAAGGACTAGATGGAAGGCATTTTAGGTTCTGCATTGCTAAATCAGCTTTCTCCTTTGCCAAATCTTGTGCTCGTTGAATTCCCCCACAGCTTTTCACCAGATTGATGGCCTCCTCGAGAGAACCAGCATCGTGAAATTCTGATTCGATTATATTCCTAAGGTTTGGCTCTTTCTCTAATGCAAAAAGTACTG</genome_strand>
        <mrna_strand>ACAA-AACTAAATTGGTAAATAGTAATATATTACTTCATTAGTAATTGTGAAATTTCTCTAGTGTACAACAACAGTTGAAATTTGACAATTTATTAGCCAAATTATAAAGAATGCTGGAACACCATATTGCTGTATTAGGAACTGAAAAATTACAACCTGTAT--G---AGTATATGAACATAGTGAAGCACTTTCGTCCTGATCGCGATCGCCATTCAAACTATAGTAATAGCTTCAACTCTATGCTCCAGATATTGTTAGATATGAAGAGCTTCAAGAGAATAATAAACCAAAGGTGTATACTTTCGTCCTGTGTTTTCGTCTATTCAATTCTCTCCAGATTATACTTCACGATTTCCTCAAGTGCTGCTCGGAAAGGACTAGACGGAAGGCATTTTAGGTTCTGCATTGCTAAATCAGCTTTCTCCTTTGCCAAATCTTGTGCTCGTTGAATTCCCCCACAGGTCTTCACCAGATTGATGGCCTCCTCAAGAGAACCAGCATCGTGAAATTCTGATTCGATTATATTCCTAAAGGTTGGCTCTTTCTCTAATGCAAAAAGTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277429" ref_strand="+" ref_description="SGN-E277429 [cLER-3-J1]">
      <seq>aaaccttaggaatataatcgaatcagaatttcacgatgctggttctctcgaggaggccatcaatctggtgaaaagctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccatctagtccttttcaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactaaagaaatttcacattacaaataatgtcatgtattagtatttactaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95437" stop="96561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95737" g_stop="96260" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="525" polyA_stop="538"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E277429" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95737" e_stop="96260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACT</genome_strand>
        <mrna_strand>AAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474799" ref_strand="-" ref_description="SGN-E474799 [cSTB-38-C3]">
      <seq>taatcgaatcagaatttcacgatgctggttctcttgaggaggccatcaatctggtgaagacctgtgggggaattcaacgagcacaagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccgtctagtcctttccgagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacacaggacgaaagtatacacctttggtttattattctcttgaagctcttcatatctaacaatatctggagcatagagttgaagctattactatagtttgaatggcgatcgcgatcaggacgaaagtgcttcactatgttcatatactcatacaggttgtaatttttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactagagaaatttcccaattactaataatgtcatatattactatttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95451" stop="96558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95751" g_stop="96251" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="498" r_length="498" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="505" polyA_stop="519"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E474799" ref_strand="-">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474799" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="95751" e_stop="96251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAA-TTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCAC-ATTACAAATAATGTCATGTATTA</genome_strand>
        <mrna_strand>TAATCGAATCAGAATTTCACGATGCTGGTTCTCTTGAGGAGGCCATCAATCTGGTGAAGACCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCGTCTAGTCCTTTCCGAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACACAGGACGAAAGTATACACCTTTGGTTTATTATTCTCTTGAAGCTCTTCATATCTAACAATATCTGGAGCATAGAGTTGAAGCTATTACTATAGTTTGAATGGCGATCGCGATCAGGACGAAAGTGCTTCACTATGTTC----A-TATACTCATACAGGTTGTAATTTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAGAGAAATTTCCCAATTACTAATAATGTCATATATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E611891" ref_strand="+" ref_description="SGN-E611891 [61648]">
      <seq>caagatttggcaaaggagaaagctgatttagcaatgcagaacctaaaatgccttccgtctagtcctttccgagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacacaggacgaaagtatacacctttggtttattattctcttgaagctcttcatatctaacaatatctggagcatagagttgaagctattactatagtttgaatggcgatcgcgatcaggacgaaagtgcttcactatgttcatatactcatacaggttgtaatttttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactagagaaatttcacaattactaataatgtcatatattactatttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95534" stop="96558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95834" g_stop="96251" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="415" r_length="415" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="422" polyA_stop="432"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E611891" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E611891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95834" e_stop="96251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAA-TTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCAC-ATTACAAATAATGTCATGTATTA</genome_strand>
        <mrna_strand>CAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCGTCTAGTCCTTTCCGAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACACAGGACGAAAGTATACACCTTTGGTTTATTATTCTCTTGAAGCTCTTCATATCTAACAATATCTGGAGCATAGAGTTGAAGCTATTACTATAGTTTGAATGGCGATCGCGATCAGGACGAAAGTGCTTCACTATGTTC----A-TATACTCATACAGGTTGTAATTTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAGAGAAATTTCACAATTACTAATAATGTCATATATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314651" ref_strand="-" ref_description="SGN-E314651 [cTOA-20-D2]">
      <seq>aaagctgatttagcaatgcagaacctaaaatgccttccatctagtcctttcnaagcagcacttgaggaaatcgtgaagtataatctggagagaattgaatagacgaaaacaaaggacgaaactatacaactttggtttattattctctgaaagctcttcatatctaacaatatctggagcacagagtagaagctattactatagtttgaatggcaacaacgatcagaacgaaagtgcttcactatgttcatatattatacccatacaggttgtaattttcagttcctaatacagcaatatggtgttccagcattctttataatttggctaataaattgtcaaatttcaactgttgttgtacactaaagaaatttcacattacaaataatgtcatgtattagtatttactattggctttcttggatgaacatatatgttataaattgataatacaataaacatattacaccttaaaaaaaaaaaaaaaaaaactcgagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0102J11-Ezy6l/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0102J11.1" temp_strand="+" temp_description="C07HBa0102J11.1  AC210354.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0102J11 upload_account_name:france">
        <position start="95552" stop="96626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95852" g_stop="96325" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="475" polyA_stop="492"/>
      <MATCH_line gen_id="C07HBa0102J11.1" gen_strand="+" ref_id="SGN-E314651" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0102J11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314651" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="95852" e_stop="96325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</genome_strand>
        <mrna_strand>AAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTCNAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>172</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="90" PGL_stop="3963"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90" e_stop="202"/>
            <exon e_start="318" e_stop="386"/>
            <exon e_start="3605" e_stop="3963"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.802" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90" e_stop="202" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="203" i_stop="317" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="318" e_stop="386" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.802">
            <gDNA_intron_boundary i_start="387" i_stop="3604" i_length="3218"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="3605" e_stop="3963" e_length="359"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90" stop="202"/>
              <exon start="318" stop="386"/>
              <exon start="3605" stop="3826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98" stop="202"/>
              <exon start="318" stop="386"/>
              <exon start="3605" stop="3871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99" stop="202"/>
              <exon start="318" stop="386"/>
              <exon start="3605" stop="3963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329790" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCCTATAACACATCCGCCACTCTATTTTACTCTATAAATACTCTATCTTTCAATTTTAACCACATTTCAAATTTCAGAATCTAATCCTTCATCGCTCCTCTTCAATTTCAG : ACTAGCAGAAACACTTTCCGCACGGTGTTTCAGAATCTAAACAATCATCGATCTCTGCTTTAATTTCAG : GTGGTCTTGTTCTAGACAGATGCCAGGGAACAAGTATACCGGCAACCAAGCGGTTGCTAGCACTCGATTGGAGAGGCTATTGAGAGAAAGAGAGCTTAGGAAAAGTAGCAAAGTTTCTCACTTTCCAAATGAATCTACTGATAACAATAGGGGAAACGAGCTCTCTGACCATGATTTTCGCCAAGGAGAAGCTGATAATGGAGGAGTTTCATATGTCGAACAGTACCTCGAAGGAGCTGCACTAGCATATAATGAAGGATGGGAGCGGCCTGATGGAAAGCCCACCAGACAACGACTCTTGGTTGTGGCAAACAGGTTACCTGTCTCTGCAGTAAGGAGAGGCGAGGAATCCTGGTCTC</gDNA_template>
            <first_frame> S  P  I  T  H  P  P  L  Y  F  T  L  *  I  L  Y  L  S  I  L  T  T  F  Q  I  S  E  S  N  P  S  S  L  L  F  N  F  R :   L  A  E  T  L  S  A  R  C  F  R  I  *  T  I  I  D  L  C  F  N  F  R :   W  S  C  S  R  Q  M  P  G  N  K  Y  T  G  N  Q  A  V  A  S  T  R  L  E  R  L  L  R  E  R  E  L  R  K  S  S  K  V  S  H  F  P  N  E  S  T  D  N  N  R  G  N  E  L  S  D  H  D  F  R  Q  G  E  A  D  N  G  G  V  S  Y  V  E  Q  Y  L  E  G  A  A  L  A  Y  N  E  G  W  E  R  P  D  G  K  P  T  R  Q  R  L  L  V  V  A  N  R  L  P  V  S  A  V  R  R  G  E  E  S  W  S  </first_frame>
            <second_frame>  L  L  *  H  I  R  H  S  I  L  L  Y  K  Y  S  I  F  Q  F  *  P  H  F  K  F  Q  N  L  I  L  H  R  S  S  S  I  S   : D  *  Q  K  H  F  P  H  G  V  S  E  S  K  Q  S  S  I  S  A  L  I  S   : G  G  L  V  L  D  R  C  Q  G  T  S  I  P  A  T  K  R  L  L  A  L  D  W  R  G  Y  *  E  K  E  S  L  G  K  V  A  K  F  L  T  F  Q  M  N  L  L  I  T  I  G  E  T  S  S  L  T  M  I  F  A  K  E  K  L  I  M  E  E  F  H  M  S  N  S  T  S  K  E  L  H  *  H  I  M  K  D  G  S  G  L  M  E  S  P  P  D  N  D  S  W  L  W  Q  T  G  Y  L  S  L  Q  *  G  E  A  R  N  P  G  L </second_frame>
            <third_frame>   S  Y  N  T  S  A  T  L  F  Y  S  I  N  T  L  S  F  N  F  N  H  I  S  N  F  R  I  *  S  F  I  A  P  L  Q  F  Q  :  T  S  R  N  T  F  R  T  V  F  Q  N  L  N  N  H  R  S  L  L  *  F  Q  :  V  V  L  F  *  T  D  A  R  E  Q  V  Y  R  Q  P  S  G  C  *  H  S  I  G  E  A  I  E  R  K  R  A  *  E  K  *  Q  S  F  S  L  S  K  *  I  Y  *  *  Q  *  G  K  R  A  L  *  P  *  F  S  P  R  R  S  *  *  W  R  S  F  I  C  R  T  V  P  R  R  S  C  T  S  I  *  *  R  M  G  A  A  *  W  K  A  H  Q  T  T  T  L  G  C  G  K  Q  V  T  C  L  C  S  K  E  R  R  G  I  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="358" stop="386"/>
                    <exon start="3605" stop="3962"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIIDLCFNFRWSCSRQMPGNKYTGNQAVASTRLERLLRERELRKSSKVSHFPNESTDNNRGNELSDHDFRQGEADNGGVSYVEQYLEGAALAYNEGWERPDGKPTRQRLLVVANRLPVSAVRRGEESWS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3980" PGL_stop="13506"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3980" e_stop="4002"/>
            <exon e_start="4143" e_stop="4240"/>
            <exon e_start="4401" e_stop="4789"/>
            <exon e_start="5541" e_stop="5655"/>
            <exon e_start="5844" e_stop="5945"/>
            <exon e_start="7042" e_stop="7192"/>
            <exon e_start="8216" e_stop="8304"/>
            <exon e_start="8395" e_stop="8443"/>
            <exon e_start="9504" e_stop="9604"/>
            <exon e_start="10229" e_stop="10416"/>
            <exon e_start="10959" e_stop="11076"/>
            <exon e_start="11621" e_stop="11800"/>
            <exon e_start="11880" e_stop="12002"/>
            <exon e_start="12076" e_stop="12163"/>
            <exon e_start="12321" e_stop="12451"/>
            <exon e_start="12528" e_stop="12626"/>
            <exon e_start="12882" e_stop="13506"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="0.957"/>
          <exon-intron don_prob="0.999" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.771" acc_prob="0.995" e_score="0.993"/>
          <exon-intron don_prob="0.988" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.220" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.785" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.815" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="3980" e_stop="4002" e_length="23"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="4003" i_stop="4142" i_length="140"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4143" e_stop="4240" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.789">
            <gDNA_intron_boundary i_start="4241" i_stop="4400" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4401" e_stop="4789" e_length="389"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.859">
            <gDNA_intron_boundary i_start="4790" i_stop="5540" i_length="751"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5541" e_stop="5655" e_length="115"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.967">
            <gDNA_intron_boundary i_start="5656" i_stop="5843" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5844" e_stop="5945" e_length="102"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.922">
            <gDNA_intron_boundary i_start="5946" i_stop="7041" i_length="1096"/>
          </intron>
          <exon e_serial="6" e_score="0.993">
            <gDNA_exon_boundary e_start="7042" e_stop="7192" e_length="151"/>
          </exon>
          <intron i_serial="6" don_prob="0.771" acc_prob="0.995">
            <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8216" e_stop="8304" e_length="89"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.991">
            <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="8395" e_stop="8443" e_length="49"/>
          </exon>
          <intron i_serial="8" don_prob="0.988" acc_prob="0.989">
            <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="9504" e_stop="9604" e_length="101"/>
          </exon>
          <intron i_serial="9" don_prob="0.948" acc_prob="0.999">
            <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="10229" e_stop="10416" e_length="188"/>
          </exon>
          <intron i_serial="10" don_prob="0.967" acc_prob="0.979">
            <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="10959" e_stop="11076" e_length="118"/>
          </exon>
          <intron i_serial="11" don_prob="0.964" acc_prob="0.985">
            <gDNA_intron_boundary i_start="11077" i_stop="11620" i_length="544"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="11621" e_stop="11800" e_length="180"/>
          </exon>
          <intron i_serial="12" don_prob="0.220" acc_prob="0.925">
            <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="11880" e_stop="12002" e_length="123"/>
          </exon>
          <intron i_serial="13" don_prob="0.924" acc_prob="0.785">
            <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="12076" e_stop="12163" e_length="88"/>
          </exon>
          <intron i_serial="14" don_prob="0.974" acc_prob="0.815">
            <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="12321" e_stop="12451" e_length="131"/>
          </exon>
          <intron i_serial="15" don_prob="0.984" acc_prob="0.999">
            <gDNA_intron_boundary i_start="12452" i_stop="12527" i_length="76"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="12528" e_stop="12626" e_length="99"/>
          </exon>
          <intron i_serial="16" don_prob="0.978" acc_prob="0.988">
            <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="12882" e_stop="13506" e_length="625"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3980" stop="4002"/>
              <exon start="4143" stop="4240"/>
              <exon start="4401" stop="4789"/>
              <exon start="5541" stop="5655"/>
              <exon start="5844" stop="5945"/>
              <exon start="7042" stop="7088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4675" stop="4789"/>
              <exon start="5541" stop="5655"/>
              <exon start="5844" stop="5945"/>
              <exon start="7042" stop="7192"/>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4675" stop="4789"/>
              <exon start="5541" stop="5655"/>
              <exon start="5844" stop="5945"/>
              <exon start="7042" stop="7125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7093" stop="7192"/>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423536" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10416"/>
              <exon start="10959" stop="10989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8400" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10416"/>
              <exon start="10959" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10271" stop="10416"/>
              <exon start="10959" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10271" stop="10416"/>
              <exon start="10959" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="11972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10336" stop="10416"/>
              <exon start="10959" stop="11027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614255" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11015" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11623" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11921" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12134" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12532" stop="12626"/>
              <exon start="12882" stop="13360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E595011" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12543" stop="12626"/>
              <exon start="12882" stop="13411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12543" stop="12626"/>
              <exon start="12882" stop="13411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12567" stop="12626"/>
              <exon start="12882" stop="13497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431632" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTCTTGTTAGTGCTCTTCTTG : GTGTGAAGGAGTTTGAGGCTAGATGGATTGGTTGGGCAGGTGTGAATGTGCCAGATGAGGCTGGGCAGAGGGCACTTACTAAGGCACTGGCAGAAAAG : AGGTGTATCCCTGTATTCCTGGATGAAGAAATTGTTCATCAGTATTACAACGGTTACTGCAACAATATATTGTGGCCTCTTTTCCATTATCTTGGACTTCCGCAAGAAGACCGCCTTGCGACTACCAGAAGTTTCCAGTCTCAGTTTGCTGCTTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAATGAACATTACGAAGAAGGTGATGTGGTATGGTGTCATGACTACCATCTCATGTTCCTGCCAAAATGTCTCAAGGATTACAACAGCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACACTGCCGTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGG : TTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTGGGACTTGAAGGAACACCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCG : TTTCCTATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTACTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAG : GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT : ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG : GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG : ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA : TTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG : TGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTG : GGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGAT : AACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAG : CACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG : ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAG : GGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG : GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAGCTAGTACATCCGTGCCAATTATTTTGTCTAGTCTTTTACTTTGGCACGAAATTTTAAGAAAATTAAGAAA</gDNA_template>
            <first_frame> R  S  C  *  C  S  S  W :   C  E  G  V  *  G  *  M  D  W  L  G  R  C  E  C  A  R  *  G  W  A  E  G  T  Y  *  G  T  G  R  K   : E  V  Y  P  C  I  P  G  *  R  N  C  S  S  V  L  Q  R  L  L  Q  Q  Y  I  V  A  S  F  P  L  S  W  T  S  A  R  R  P  P  C  D  Y  Q  K  F  P  V  S  V  C  C  L  *  E  S  K  S  N  V  C  *  C  C  E  *  T  L  R  R  R  *  C  G  M  V  S  *  L  P  S  H  V  P  A  K  M  S  Q  G  L  Q  Q  P  N  E  S  R  L  V  S  T  H  T  L  S  I  L  G  N  T  Q  D  T  A  V  *  I  R  A  A  P  S  S  S  C  C  *  L  G  W  :  F  S  Y  L  *  L  C  K  A  F  C  *  C  M  Y  S  Y  P  G  T  *  R  N  T  *  R  S  R  R  S  R  *  T  D  P  R  C  C   : V  S  Y  W  Y  R  F  R  T  I  Y  S  S  T  *  S  Y  S  S  S  G  T  H  K  R  T  K  R  E  I  C  W  E  K   : G  Y  A  R  S  *  S  P  *  Y  D  *  R  N  S  P  K  D  P  G  I  *  E  V  P  *  R  K  S  V  L  A  *  *  S  G  F  A  S  N  C  C  A  N  K  N  R  C  S  *  I :   P  K  T  Y  Q  S  S  S  *  D  C  W  T  H  Q  W  S  V  W  N  F  D  C  S  A  Y  S  S  S   : G  P  F  S  *  L  S  C  I  M  C  T  V  C  C  N  * :   C  S  V  G  Y  L  F  K  R  W  H  E  P  R  Q  L  *  I  C  S  L  P  R  V  E  K  R  G  P  Y  S  Q  R   : I  C  W  C  C  T  I  V  R  C  W  S  N  S  G  E  S  M  E  Y  N  R  G  C  C  F  D  W  A  S  F  K  Y  V  S  *  R  K  R  K  T  P  Q  A  *  L  S  A  C  D  Y  A  Y  C  S  R  M  G  *  D  F  C  E  :  *  T  K  *  Y  C  Y  *  S  S  T  E  D  K  K  S  S  A  P  A  *  H  Q  *  C  N  *  A  L  F  V  F  Q  *  S  T  T  N  I   : G  F  Q  F  Y  T  D  R  I  G  G  Y  P  W  K  K  R  W  R  S  N  Q  R  N  G  T  E  I  A  S  *  V  E  R  I  I  A  R  D  L  *  R  P  K  D  N  S  R  C  P  Q  W  K  *  *  K  R  L  R  *   : *  L  Q  R  V  Q  H  V  V  S  S  R  K  W  N  V  F  T  I  Y  K  R  C  M  D  D  N  Y  A  R  T  P  K  H  G  L  G  *  *  C  *   : A  R  F  R  V  L  H  *  K  D  T  E  I  S  L  *  T  T  *  N  F  T  C  L  E  L  Q  V  C  R :   C  *  I  W  K  I  A  S  *  R  H  A  S  A  S  L  D  R  S  N  I  K  C  I  C  *  C  C  T  R  T  P  L  R  *  G  S  S  S  W  C  Y  K   : G  S  S  N  R  S  Y  T  G  G  D  R  T  Q  *  S  H  R  N  T  N  *  L  R  F  M  H  R  A  F  S  G  E   : G  *  G  C  I  Y  I  F  *  A  R  A  S  F  *  L  H  R  Y  A  K  K  *  G  Q  *  C  T  K  G  A  R  G  K  A  I  S  S  K  T  P  F  *  S  N  *  L  K  V  I  S  E  *  E  Q  T  S  F  K  L  G  *  E  D  F  Q  W  A  T  A  L  T  *  K  C  V  M  E  C  A  G  S  E  E  G  E  L  L  L  L  C  S  W  K  D  S  Y  K  R  S  V  S  A  Q  Y  A  R  R  R  C  C  F  S  K  G  T  S  *  S  T  Y  F  K  W  D  I  M  K  K  K  D  R  *  C  L  V  A  S  S  D  E  *  S  V  P  S  S  W  L  R  E  I  C  M  G  *  Y  *  I  N  V  L  Y  L  Y  F  G  Y  R  C  L  H  S  K  V  Y  K  V  E  R  I  T  F  M  L  A  S  T  S  V  P  I  I  L  S  S  L  L  L  W  H  E  I  L  R  K  L  R   </first_frame>
            <second_frame>  G  L  V  S  A  L  L   : G  V  K  E  F  E  A  R  W  I  G  W  A  G  V  N  V  P  D  E  A  G  Q  R  A  L  T  K  A  L  A  E  K  :  R  C  I  P  V  F  L  D  E  E  I  V  H  Q  Y  Y  N  G  Y  C  N  N  I  L  W  P  L  F  H  Y  L  G  L  P  Q  E  D  R  L  A  T  T  R  S  F  Q  S  Q  F  A  A  Y  K  K  A  N  Q  M  F  A  D  V  V  N  E  H  Y  E  E  G  D  V  V  W  C  H  D  Y  H  L  M  F  L  P  K  C  L  K  D  Y  N  S  Q  M  K  V  G  W  F  L  H  T  P  F  P  S  S  E  I  H  R  T  L  P  S  R  S  E  L  L  R  A  V  L  A  A  D  L  V  G :   F  H  T  Y  D  Y  A  R  H  F  V  S  A  C  T  R  I  L  G  L  E  G  T  P  E  G  V  E  D  Q  G  R  L  T  R  V  A  A  :  F  P  I  G  I  D  S  E  R  F  I  R  A  L  E  V  T  Q  V  Q  E  H  I  K  E  L  K  E  R  F  A  G  R  K  :  V  M  L  G  V  D  R  L  D  M  I  K  G  I  P  Q  K  I  L  A  F  E  K  F  L  E  E  N  P  Y  W  R  D  K  V  V  L  L  Q  I  A  V  P  T  R  T  D  V  P  E   : Y  Q  K  L  T  S  Q  V  H  E  I  V  G  R  I  N  G  R  F  G  T  L  T  A  V  P  I  H  H  L  :  D  R  S  L  D  F  H  A  L  C  A  L  Y  A  V  T   : D  V  A  L  V  T  S  L  R  D  G  M  N  L  V  S  Y  E  F  V  A  C  Q  E  L  K  K  G  V  L  I  L  S  E  :  F  A  G  A  A  Q  S  L  G  A  G  A  I  L  V  N  P  W  N  I  T  E  V  A  A  S  I  G  Q  A  L  N  M  S  A  E  E  R  E  K  R  H  R  H  N  F  L  H  V  T  T  H  T  A  Q  E  W  A  E  T  F  V  S :   E  L  N  D  T  V  I  E  A  Q  Q  R  I  R  K  V  P  P  R  L  N  I  S  D  A  I  E  R  Y  S  F  S  N  N  R  L  L  I  L  :  G  F  N  S  T  L  T  E  S  V  D  T  P  G  R  R  G  G  D  Q  I  K  E  M  E  L  K  L  H  P  E  L  K  E  S  L  L  A  I  C  N  D  P  K  T  T  V  V  V  L  S  G  S  D  R  N  V  L  D  D  :  N  F  S  E  Y  N  M  W  L  A  A  E  N  G  M  F  L  R  S  T  N  G  V  W  M  T  T  M  P  E  H  L  N  M  D  W  V  D  S  V  K  :  H  V  F  E  Y  F  T  E  R  T  P  R  S  H  F  E  Q  R  E  T  S  L  V  W  N  Y  K  Y  A   : D  V  E  F  G  R  L  Q  A  R  D  M  L  Q  H  L  W  T  G  P  I  S  N  A  S  V  D  V  V  Q  G  L  R  S  V  E  V  R  A  V  G  V  T  K  :  G  A  A  I  D  R  I  L  G  E  I  V  H  S  K  A  I  A  T  P  I  D  Y  V  L  C  I  G  H  F  L  G  K  :  D  E  D  V  Y  T  F  F  E  P  E  L  P  S  D  C  I  G  M  P  R  S  K  V  S  D  A  P  K  V  P  G  E  R  R  S  V  P  K  L  P  S  S  R  T  S  S  K  S  S  Q  N  R  N  R  P  V  S  N  S  D  K  K  T  S  N  G  R  R  P  S  P  E  N  V  S  W  N  V  L  D  L  K  K  E  N  Y  F  S  C  A  V  G  R  T  R  T  N  A  R  Y  L  L  S  T  P  D  D  V  V  A  F  L  R  E  L  A  E  A  P  I  S  N  G  T  S  *  K  R  R  I  D  D  A  W  L  H  Q  V  M  N  D  Q  Y  Q  V  L  G  *  G  R  F  V  W  D  D  I  E  *  T  F  Y  T  F  T  L  D  I  D  V  C  I  Q  K  F  T  K  *  R  E  *  P  S  C  *  L  V  H  P  C  Q  L  F  C  L  V  F  Y  F  G  T  K  F  *  E  N  *  E  </second_frame>
            <third_frame>   V  L  L  V  L  F  L  :  V  *  R  S  L  R  L  D  G  L  V  G  Q  V  *  M  C  Q  M  R  L  G  R  G  H  L  L  R  H  W  Q  K  R :   G  V  S  L  Y  S  W  M  K  K  L  F  I  S  I  T  T  V  T  A  T  I  Y  C  G  L  F  S  I  I  L  D  F  R  K  K  T  A  L  R  L  P  E  V  S  S  L  S  L  L  L  I  R  K  Q  I  K  C  L  L  M  L  *  M  N  I  T  K  K  V  M  W  Y  G  V  M  T  T  I  S  C  S  C  Q  N  V  S  R  I  T  T  A  K  *  K  S  V  G  F  Y  T  H  P  F  H  P  R  K  Y  T  G  H  C  R  L  D  Q  S  C  S  E  Q  F  L  L  L  T  W  L   : V  F  I  P  M  T  M  Q  G  I  L  L  V  H  V  L  V  S  W  D  L  K  E  H  L  K  E  *  K  I  K  V  D  *  P  A  L  L  R :   F  L  L  V  *  I  Q  N  D  L  F  E  H  L  K  L  L  K  F  R  N  T  *  K  N  *  K  R  D  L  L  G  E  R :   L  C  *  E  L  I  A  L  I  *  L  K  E  F  P  K  R  S  W  H  L  R  S  S  L  K  K  I  R  T  G  V  I  K  W  F  C  F  K  L  L  C  Q  Q  E  Q  M  F  L  N  :  T  K  N  L  P  V  K  F  M  R  L  L  D  A  S  M  V  G  L  E  L  *  L  Q  C  L  F  I  I  W :   T  V  L  L  T  F  M  H  Y  V  H  C  M  L  *  L  :  M  *  R  W  L  P  L  *  E  M  A  *  T  S  S  A  M  N  L  *  P  A  K  S  *  K  K  G  S  L  F  S  A  N :   L  L  V  L  H  N  R  *  V  L  E  Q  F  W  *  I  H  G  I  *  Q  R  L  L  L  R  L  G  K  L  *  I  C  Q  L  K  K  E  K  N  A  T  G  I  T  F  C  M  *  L  R  I  L  L  K  N  G  L  R  L  L  *   : V  N  *  M  I  L  L  L  K  L  N  R  G  *  E  K  F  R  P  G  L  T  S  V  M  Q  L  S  A  I  R  F  P  I  I  D  Y  *  Y  W :   V  S  I  L  H  *  Q  N  R  W  I  P  L  E  E  E  V  E  I  K  S  K  K  W  N  *  N  C  I  L  S  *  K  N  H  C  S  R  F  V  T  T  Q  R  Q  Q  S  L  S  S  V  E  V  I  E  T  S  *  M  I :   T  S  A  S  T  T  C  G  *  Q  Q  K  M  E  C  F  Y  D  L  Q  T  V  Y  G  *  Q  L  C  Q  N  T  *  T  W  T  G  L  I  V  L  S :   T  F  S  S  T  S  L  K  G  H  R  D  L  T  L  N  N  V  K  L  H  L  F  G  I  T  S  M  Q  :  M  L  N  L  E  D  C  K  L  E  T  C  F  S  I  S  G  Q  V  Q  Y  Q  M  H  L  L  M  L  Y  K  D  S  A  P  L  R  F  E  Q  L  V  L  Q  R :   E  Q  Q  *  I  V  Y  W  G  R  S  Y  T  V  K  P  S  Q  H  Q  L  I  T  F  Y  A  *  G  I  F  W  G  R :   M  R  M  Y  I  H  F  L  S  Q  S  F  L  L  T  A  S  V  C  Q  E  V  R  S  V  M  H  Q  R  C  P  G  K  G  D  Q  F  Q  N  S  L  L  V  E  L  A  Q  S  H  L  R  I  G  T  D  Q  F  Q  T  R  I  R  R  L  P  M  G  D  G  P  H  L  K  M  C  H  G  M  C  W  I  *  R  R  R  I  T  S  L  V  Q  L  E  G  L  V  Q  T  L  G  I  C  S  V  R  Q  T  T  L  L  L  F  *  G  N  *  L  K  H  L  F  Q  M  G  H  H  E  K  E  G  *  M  M  P  G  C  I  K  *  *  M  I  S  T  K  F  L  V  E  G  D  L  Y  G  M  I  L  N  K  R  F  I  P  L  L  W  I  *  M  F  A  F  K  S  L  Q  S  R  E  N  N  L  H  A  S  *  Y  I  R  A  N  Y  F  V  *  S  F  T  L  A  R  N  F  K  K  I  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3981" stop="4002"/>
                    <exon start="4143" stop="4240"/>
                    <exon start="4401" stop="4789"/>
                    <exon start="5541" stop="5655"/>
                    <exon start="5844" stop="5945"/>
                    <exon start="7042" stop="7192"/>
                    <exon start="8216" stop="8304"/>
                    <exon start="8395" stop="8443"/>
                    <exon start="9504" stop="9604"/>
                    <exon start="10229" stop="10416"/>
                    <exon start="10959" stop="11076"/>
                    <exon start="11621" stop="11800"/>
                    <exon start="11880" stop="12002"/>
                    <exon start="12076" stop="12163"/>
                    <exon start="12321" stop="12451"/>
                    <exon start="12528" stop="12626"/>
                    <exon start="12882" stop="13262"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2421</number_coding_nucleotides>
                  <number_encoded_amino_acids>807</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLVSALLGVKEFEARWIGWAGVNVPDEAGQRALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKDYNSQMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEVTQVQEHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQELKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMSAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVIEAQQRIRKVPPRLNISDAIERYSFSNNRLLILGFNSTLTESVDTPGRRGGDQIKEMELKLHPELKESLLAICNDPKTTVVVLSGSDRNVLDDNFSEYNMWLAAENGMFLRSTNGVWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGLRSVEVRAVGVTKGAAIDRILGEIVHSKAIATPIDYVLCIGHFLGKDEDVYTFFEPELPSDCIGMPRSKVSDAPKVPGERRSVPKLPSSRTSSKSSQNRNRPVSNSDKKTSNGRRPSPENVSWNVLDLKKENYFSCAVGRTRTNARYLLSTPDDVVAFLRELAEAPISNGTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="6754" e_stop="6756"/>
            <exon e_start="7042" e_stop="7192"/>
            <exon e_start="8216" e_stop="8304"/>
            <exon e_start="8395" e_stop="8443"/>
            <exon e_start="9504" e_stop="9604"/>
            <exon e_start="10229" e_stop="10416"/>
            <exon e_start="10959" e_stop="11076"/>
            <exon e_start="11621" e_stop="11800"/>
            <exon e_start="11880" e_stop="12002"/>
            <exon e_start="12076" e_stop="12163"/>
            <exon e_start="12321" e_stop="12451"/>
            <exon e_start="12528" e_stop="12626"/>
            <exon e_start="12882" e_stop="13506"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.932" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.771" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.220" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.785" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.815" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="6754" e_stop="6756" e_length="3"/>
          </exon>
          <intron i_serial="1" don_prob="0.932" acc_prob="0.922">
            <gDNA_intron_boundary i_start="6757" i_stop="7041" i_length="285"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7042" e_stop="7192" e_length="151"/>
          </exon>
          <intron i_serial="2" don_prob="0.771" acc_prob="0.995">
            <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8216" e_stop="8304" e_length="89"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.991">
            <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8395" e_stop="8443" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.989">
            <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9504" e_stop="9604" e_length="101"/>
          </exon>
          <intron i_serial="5" don_prob="0.948" acc_prob="0.999">
            <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10229" e_stop="10416" e_length="188"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="0.979">
            <gDNA_intron_boundary i_start="10417" i_stop="10958" i_length="542"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="10959" e_stop="11076" e_length="118"/>
          </exon>
          <intron i_serial="7" don_prob="0.964" acc_prob="0.985">
            <gDNA_intron_boundary i_start="11077" i_stop="11620" i_length="544"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="11621" e_stop="11800" e_length="180"/>
          </exon>
          <intron i_serial="8" don_prob="0.220" acc_prob="0.925">
            <gDNA_intron_boundary i_start="11801" i_stop="11879" i_length="79"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="11880" e_stop="12002" e_length="123"/>
          </exon>
          <intron i_serial="9" don_prob="0.924" acc_prob="0.785">
            <gDNA_intron_boundary i_start="12003" i_stop="12075" i_length="73"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="12076" e_stop="12163" e_length="88"/>
          </exon>
          <intron i_serial="10" don_prob="0.974" acc_prob="0.815">
            <gDNA_intron_boundary i_start="12164" i_stop="12320" i_length="157"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="12321" e_stop="12451" e_length="131"/>
          </exon>
          <intron i_serial="11" don_prob="0.984" acc_prob="0.999">
            <gDNA_intron_boundary i_start="12452" i_stop="12527" i_length="76"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="12528" e_stop="12626" e_length="99"/>
          </exon>
          <intron i_serial="12" don_prob="0.978" acc_prob="0.988">
            <gDNA_intron_boundary i_start="12627" i_stop="12881" i_length="255"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="12882" e_stop="13506" e_length="625"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6754" stop="6756"/>
              <exon start="7042" stop="7192"/>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7093" stop="7192"/>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423536" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10416"/>
              <exon start="10959" stop="10989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8400" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10416"/>
              <exon start="10959" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13506"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10271" stop="10416"/>
              <exon start="10959" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10271" stop="10416"/>
              <exon start="10959" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="11972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10336" stop="10416"/>
              <exon start="10959" stop="11027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614255" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11015" stop="11076"/>
              <exon start="11621" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11623" stop="11800"/>
              <exon start="11880" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11921" stop="12002"/>
              <exon start="12076" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12134" stop="12163"/>
              <exon start="12321" stop="12451"/>
              <exon start="12528" stop="12626"/>
              <exon start="12882" stop="13441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12532" stop="12626"/>
              <exon start="12882" stop="13360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E595011" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12543" stop="12626"/>
              <exon start="12882" stop="13411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12543" stop="12626"/>
              <exon start="12882" stop="13411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12567" stop="12626"/>
              <exon start="12882" stop="13497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431632" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAG : GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT : ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG : GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG : ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA : TTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTGCTCAAGAATGGGCTGAGACTTTTGTGAG : TGAACTAAATGATACTGTTATTGAAGCTCAACAGAGGATAAGAAAAGTTCCGCCCCGGCTTAACATCAGTGATGCAATTGAGCGCTATTCGTTTTCCAATAATCGACTACTAATATTG : GGTTTCAATTCTACACTGACAGAATCGGTGGATACCCCTGGAAGAAGAGGTGGAGATCAAATCAAAGAAATGGAACTGAAATTGCATCCTGAGTTGAAAGAATCATTGCTCGCGATTTGTAACGACCCAAAGACAACAGTCGTTGTCCTCAGTGGAAGTGATAGAAACGTCTTAGATGAT : AACTTCAGCGAGTACAACATGTGGTTAGCAGCAGAAAATGGAATGTTTTTACGATCTACAAACGGTGTATGGATGACAACTATGCCAGAACACCTAAACATGGACTGGGTTGATAGTGTTAAG : CACGTTTTCGAGTACTTCACTGAAAGGACACCGAGATCTCACTTTGAACAACGTGAAACTTCACTTGTTTGGAATTACAAGTATGCAG : ATGTTGAATTTGGAAGATTGCAAGCTAGAGACATGCTTCAGCATCTCTGGACAGGTCCAATATCAAATGCATCTGTTGATGTTGTACAAGGACTCCGCTCCGTTGAGGTTCGAGCAGTTGGTGTTACAAAG : GGAGCAGCAATAGATCGTATACTGGGGGAGATCGTACACAGTAAAGCCATCGCAACACCAATTGATTACGTTTTATGCATAGGGCATTTTCTGGGGAAG : GATGAGGATGTATATACATTTTTTGAGCCAGAGCTTCCTTCTGACTGCATCGGTATGCCAAGAAGTAAGGTCAGTGATGCACCAAAGGTGCCCGGGGAAAGGCGATCAGTTCCAAAACTCCCTTCTAGTCGAACTAGCTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAGAGAGAATAACCTTCATGCTAGCTAGTACATCCGTGCCAATTATTTTGTCTAGTCTTTTACTTTGGCACGAAATTTTAAGAAAATTAAGAAA</gDNA_template>
            <first_frame> K  :  V  M  L  G  V  D  R  L  D  M  I  K  G  I  P  Q  K  I  L  A  F  E  K  F  L  E  E  N  P  Y  W  R  D  K  V  V  L  L  Q  I  A  V  P  T  R  T  D  V  P  E   : Y  Q  K  L  T  S  Q  V  H  E  I  V  G  R  I  N  G  R  F  G  T  L  T  A  V  P  I  H  H  L  :  D  R  S  L  D  F  H  A  L  C  A  L  Y  A  V  T   : D  V  A  L  V  T  S  L  R  D  G  M  N  L  V  S  Y  E  F  V  A  C  Q  E  L  K  K  G  V  L  I  L  S  E  :  F  A  G  A  A  Q  S  L  G  A  G  A  I  L  V  N  P  W  N  I  T  E  V  A  A  S  I  G  Q  A  L  N  M  S  A  E  E  R  E  K  R  H  R  H  N  F  L  H  V  T  T  H  T  A  Q  E  W  A  E  T  F  V  S :   E  L  N  D  T  V  I  E  A  Q  Q  R  I  R  K  V  P  P  R  L  N  I  S  D  A  I  E  R  Y  S  F  S  N  N  R  L  L  I  L  :  G  F  N  S  T  L  T  E  S  V  D  T  P  G  R  R  G  G  D  Q  I  K  E  M  E  L  K  L  H  P  E  L  K  E  S  L  L  A  I  C  N  D  P  K  T  T  V  V  V  L  S  G  S  D  R  N  V  L  D  D  :  N  F  S  E  Y  N  M  W  L  A  A  E  N  G  M  F  L  R  S  T  N  G  V  W  M  T  T  M  P  E  H  L  N  M  D  W  V  D  S  V  K  :  H  V  F  E  Y  F  T  E  R  T  P  R  S  H  F  E  Q  R  E  T  S  L  V  W  N  Y  K  Y  A   : D  V  E  F  G  R  L  Q  A  R  D  M  L  Q  H  L  W  T  G  P  I  S  N  A  S  V  D  V  V  Q  G  L  R  S  V  E  V  R  A  V  G  V  T  K  :  G  A  A  I  D  R  I  L  G  E  I  V  H  S  K  A  I  A  T  P  I  D  Y  V  L  C  I  G  H  F  L  G  K  :  D  E  D  V  Y  T  F  F  E  P  E  L  P  S  D  C  I  G  M  P  R  S  K  V  S  D  A  P  K  V  P  G  E  R  R  S  V  P  K  L  P  S  S  R  T  S  S  K  S  S  Q  N  R  N  R  P  V  S  N  S  D  K  K  T  S  N  G  R  R  P  S  P  E  N  V  S  W  N  V  L  D  L  K  K  E  N  Y  F  S  C  A  V  G  R  T  R  T  N  A  R  Y  L  L  S  T  P  D  D  V  V  A  F  L  R  E  L  A  E  A  P  I  S  N  G  T  S  *  K  R  R  I  D  D  A  W  L  H  Q  V  M  N  D  Q  Y  Q  V  L  G  *  G  R  F  V  W  D  D  I  E  *  T  F  Y  T  F  T  L  D  I  D  V  C  I  Q  K  F  T  K  *  R  E  *  P  S  C  *  L  V  H  P  C  Q  L  F  C  L  V  F  Y  F  G  T  K  F  *  E  N  *  E  </first_frame>
            <second_frame>  R :   L  C  *  E  L  I  A  L  I  *  L  K  E  F  P  K  R  S  W  H  L  R  S  S  L  K  K  I  R  T  G  V  I  K  W  F  C  F  K  L  L  C  Q  Q  E  Q  M  F  L  N  :  T  K  N  L  P  V  K  F  M  R  L  L  D  A  S  M  V  G  L  E  L  *  L  Q  C  L  F  I  I  W :   T  V  L  L  T  F  M  H  Y  V  H  C  M  L  *  L  :  M  *  R  W  L  P  L  *  E  M  A  *  T  S  S  A  M  N  L  *  P  A  K  S  *  K  K  G  S  L  F  S  A  N :   L  L  V  L  H  N  R  *  V  L  E  Q  F  W  *  I  H  G  I  *  Q  R  L  L  L  R  L  G  K  L  *  I  C  Q  L  K  K  E  K  N  A  T  G  I  T  F  C  M  *  L  R  I  L  L  K  N  G  L  R  L  L  *   : V  N  *  M  I  L  L  L  K  L  N  R  G  *  E  K  F  R  P  G  L  T  S  V  M  Q  L  S  A  I  R  F  P  I  I  D  Y  *  Y  W :   V  S  I  L  H  *  Q  N  R  W  I  P  L  E  E  E  V  E  I  K  S  K  K  W  N  *  N  C  I  L  S  *  K  N  H  C  S  R  F  V  T  T  Q  R  Q  Q  S  L  S  S  V  E  V  I  E  T  S  *  M  I :   T  S  A  S  T  T  C  G  *  Q  Q  K  M  E  C  F  Y  D  L  Q  T  V  Y  G  *  Q  L  C  Q  N  T  *  T  W  T  G  L  I  V  L  S :   T  F  S  S  T  S  L  K  G  H  R  D  L  T  L  N  N  V  K  L  H  L  F  G  I  T  S  M  Q  :  M  L  N  L  E  D  C  K  L  E  T  C  F  S  I  S  G  Q  V  Q  Y  Q  M  H  L  L  M  L  Y  K  D  S  A  P  L  R  F  E  Q  L  V  L  Q  R :   E  Q  Q  *  I  V  Y  W  G  R  S  Y  T  V  K  P  S  Q  H  Q  L  I  T  F  Y  A  *  G  I  F  W  G  R :   M  R  M  Y  I  H  F  L  S  Q  S  F  L  L  T  A  S  V  C  Q  E  V  R  S  V  M  H  Q  R  C  P  G  K  G  D  Q  F  Q  N  S  L  L  V  E  L  A  Q  S  H  L  R  I  G  T  D  Q  F  Q  T  R  I  R  R  L  P  M  G  D  G  P  H  L  K  M  C  H  G  M  C  W  I  *  R  R  R  I  T  S  L  V  Q  L  E  G  L  V  Q  T  L  G  I  C  S  V  R  Q  T  T  L  L  L  F  *  G  N  *  L  K  H  L  F  Q  M  G  H  H  E  K  E  G  *  M  M  P  G  C  I  K  *  *  M  I  S  T  K  F  L  V  E  G  D  L  Y  G  M  I  L  N  K  R  F  I  P  L  L  W  I  *  M  F  A  F  K  S  L  Q  S  R  E  N  N  L  H  A  S  *  Y  I  R  A  N  Y  F  V  *  S  F  T  L  A  R  N  F  K  K  I  K  K </second_frame>
            <third_frame>    : G  Y  A  R  S  *  S  P  *  Y  D  *  R  N  S  P  K  D  P  G  I  *  E  V  P  *  R  K  S  V  L  A  *  *  S  G  F  A  S  N  C  C  A  N  K  N  R  C  S  *  I :   P  K  T  Y  Q  S  S  S  *  D  C  W  T  H  Q  W  S  V  W  N  F  D  C  S  A  Y  S  S  S   : G  P  F  S  *  L  S  C  I  M  C  T  V  C  C  N  * :   C  S  V  G  Y  L  F  K  R  W  H  E  P  R  Q  L  *  I  C  S  L  P  R  V  E  K  R  G  P  Y  S  Q  R   : I  C  W  C  C  T  I  V  R  C  W  S  N  S  G  E  S  M  E  Y  N  R  G  C  C  F  D  W  A  S  F  K  Y  V  S  *  R  K  R  K  T  P  Q  A  *  L  S  A  C  D  Y  A  Y  C  S  R  M  G  *  D  F  C  E  :  *  T  K  *  Y  C  Y  *  S  S  T  E  D  K  K  S  S  A  P  A  *  H  Q  *  C  N  *  A  L  F  V  F  Q  *  S  T  T  N  I   : G  F  Q  F  Y  T  D  R  I  G  G  Y  P  W  K  K  R  W  R  S  N  Q  R  N  G  T  E  I  A  S  *  V  E  R  I  I  A  R  D  L  *  R  P  K  D  N  S  R  C  P  Q  W  K  *  *  K  R  L  R  *   : *  L  Q  R  V  Q  H  V  V  S  S  R  K  W  N  V  F  T  I  Y  K  R  C  M  D  D  N  Y  A  R  T  P  K  H  G  L  G  *  *  C  *   : A  R  F  R  V  L  H  *  K  D  T  E  I  S  L  *  T  T  *  N  F  T  C  L  E  L  Q  V  C  R :   C  *  I  W  K  I  A  S  *  R  H  A  S  A  S  L  D  R  S  N  I  K  C  I  C  *  C  C  T  R  T  P  L  R  *  G  S  S  S  W  C  Y  K   : G  S  S  N  R  S  Y  T  G  G  D  R  T  Q  *  S  H  R  N  T  N  *  L  R  F  M  H  R  A  F  S  G  E   : G  *  G  C  I  Y  I  F  *  A  R  A  S  F  *  L  H  R  Y  A  K  K  *  G  Q  *  C  T  K  G  A  R  G  K  A  I  S  S  K  T  P  F  *  S  N  *  L  K  V  I  S  E  *  E  Q  T  S  F  K  L  G  *  E  D  F  Q  W  A  T  A  L  T  *  K  C  V  M  E  C  A  G  S  E  E  G  E  L  L  L  L  C  S  W  K  D  S  Y  K  R  S  V  S  A  Q  Y  A  R  R  R  C  C  F  S  K  G  T  S  *  S  T  Y  F  K  W  D  I  M  K  K  K  D  R  *  C  L  V  A  S  S  D  E  *  S  V  P  S  S  W  L  R  E  I  C  M  G  *  Y  *  I  N  V  L  Y  L  Y  F  G  Y  R  C  L  H  S  K  V  Y  K  V  E  R  I  T  F  M  L  A  S  T  S  V  P  I  I  L  S  S  L  L  L  W  H  E  I  L  R  K  L  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6754" stop="6756"/>
                    <exon start="7042" stop="7192"/>
                    <exon start="8216" stop="8304"/>
                    <exon start="8395" stop="8443"/>
                    <exon start="9504" stop="9604"/>
                    <exon start="10229" stop="10416"/>
                    <exon start="10959" stop="11076"/>
                    <exon start="11621" stop="11800"/>
                    <exon start="11880" stop="12002"/>
                    <exon start="12076" stop="12163"/>
                    <exon start="12321" stop="12451"/>
                    <exon start="12528" stop="12626"/>
                    <exon start="12882" stop="13262"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1698</number_coding_nucleotides>
                  <number_encoded_amino_acids>566</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQELKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMSAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVIEAQQRIRKVPPRLNISDAIERYSFSNNRLLILGFNSTLTESVDTPGRRGGDQIKEMELKLHPELKESLLAICNDPKTTVVVLSGSDRNVLDDNFSEYNMWLAAENGMFLRSTNGVWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGLRSVEVRAVGVTKGAAIDRILGEIVHSKAIATPIDYVLCIGHFLGKDEDVYTFFEPELPSDCIGMPRSKVSDAPKVPGERRSVPKLPSSRTSSKSSQNRNRPVSNSDKKTSNGRRPSPENVSWNVLDLKKENYFSCAVGRTRTNARYLLSTPDDVVAFLRELAEAPISNGTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="3980" e_stop="4002"/>
            <exon e_start="4143" e_stop="4240"/>
            <exon e_start="4401" e_stop="4789"/>
            <exon e_start="5541" e_stop="5655"/>
            <exon e_start="5844" e_stop="5945"/>
            <exon e_start="7042" e_stop="7192"/>
            <exon e_start="8216" e_stop="8304"/>
            <exon e_start="8395" e_stop="8443"/>
            <exon e_start="9504" e_stop="9604"/>
            <exon e_start="10229" e_stop="10388"/>
            <exon e_start="13019" e_stop="13415"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="0.957"/>
          <exon-intron don_prob="0.999" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.771" acc_prob="0.995" e_score="0.993"/>
          <exon-intron don_prob="0.988" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.975"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="3980" e_stop="4002" e_length="23"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="4003" i_stop="4142" i_length="140"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4143" e_stop="4240" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.789">
            <gDNA_intron_boundary i_start="4241" i_stop="4400" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4401" e_stop="4789" e_length="389"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.859">
            <gDNA_intron_boundary i_start="4790" i_stop="5540" i_length="751"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5541" e_stop="5655" e_length="115"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.967">
            <gDNA_intron_boundary i_start="5656" i_stop="5843" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5844" e_stop="5945" e_length="102"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.922">
            <gDNA_intron_boundary i_start="5946" i_stop="7041" i_length="1096"/>
          </intron>
          <exon e_serial="6" e_score="0.993">
            <gDNA_exon_boundary e_start="7042" e_stop="7192" e_length="151"/>
          </exon>
          <intron i_serial="6" don_prob="0.771" acc_prob="0.995">
            <gDNA_intron_boundary i_start="7193" i_stop="8215" i_length="1023"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8216" e_stop="8304" e_length="89"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.991">
            <gDNA_intron_boundary i_start="8305" i_stop="8394" i_length="90"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="8395" e_stop="8443" e_length="49"/>
          </exon>
          <intron i_serial="8" don_prob="0.988" acc_prob="0.989">
            <gDNA_intron_boundary i_start="8444" i_stop="9503" i_length="1060"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="9504" e_stop="9604" e_length="101"/>
          </exon>
          <intron i_serial="9" don_prob="0.948" acc_prob="0.999">
            <gDNA_intron_boundary i_start="9605" i_stop="10228" i_length="624"/>
          </intron>
          <exon e_serial="10" e_score="0.975">
            <gDNA_exon_boundary e_start="10229" e_stop="10388" e_length="160"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10389" i_stop="13018" i_length="2630"/>
          </intron>
          <exon e_serial="11" e_score="0.927">
            <gDNA_exon_boundary e_start="13019" e_stop="13415" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3980" stop="4002"/>
              <exon start="4143" stop="4240"/>
              <exon start="4401" stop="4789"/>
              <exon start="5541" stop="5655"/>
              <exon start="5844" stop="5945"/>
              <exon start="7042" stop="7088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4675" stop="4789"/>
              <exon start="5541" stop="5655"/>
              <exon start="5844" stop="5945"/>
              <exon start="7042" stop="7192"/>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4675" stop="4789"/>
              <exon start="5541" stop="5655"/>
              <exon start="5844" stop="5945"/>
              <exon start="7042" stop="7125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7093" stop="7192"/>
              <exon start="8216" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10388"/>
              <exon start="13019" stop="13229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8231" stop="8304"/>
              <exon start="8395" stop="8443"/>
              <exon start="9504" stop="9604"/>
              <exon start="10229" stop="10388"/>
              <exon start="13019" stop="13415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423537" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTCTTGTTAGTGCTCTTCTTG : GTGTGAAGGAGTTTGAGGCTAGATGGATTGGTTGGGCAGGTGTGAATGTGCCAGATGAGGCTGGGCAGAGGGCACTTACTAAGGCACTGGCAGAAAAG : AGGTGTATCCCTGTATTCCTGGATGAAGAAATTGTTCATCAGTATTACAACGGTTACTGCAACAATATATTGTGGCCTCTTTTCCATTATCTTGGACTTCCGCAAGAAGACCGCCTTGCGACTACCAGAAGTTTCCAGTCTCAGTTTGCTGCTTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAATGAACATTACGAAGAAGGTGATGTGGTATGGTGTCATGACTACCATCTCATGTTCCTGCCAAAATGTCTCAAGGATTACAACAGCCAAATGAAAGTCGGTTGGTTTCTACACACACCCTTTCCATCCTCGGAAATACACAGGACACTGCCGTCTAGATCAGAGCTGCTCCGAGCAGTTCTTGCTGCTGACTTGGTTGG : TTTTCATACCTATGACTATGCAAGGCATTTTGTTAGTGCATGTACTCGTATCCTGGGACTTGAAGGAACACCTGAAGGAGTAGAAGATCAAGGTAGACTGACCCGCGTTGCTGCG : TTTCCTATTGGTATAGATTCAGAACGATTTATTCGAGCACTTGAAGTTACTCAAGTTCAGGAACACATAAAAGAACTAAAAGAGAGATTTGCTGGGAGAAAG : GTTATGCTAGGAGTTGATCGCCTTGATATGATTAAAGGAATTCCCCAAAAGATCCTGGCATTTGAGAAGTTCCTTGAAGAAAATCCGTACTGGCGTGATAAAGTGGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAAT : ACCAAAAACTTACCAGTCAAGTTCATGAGATTGTTGGACGCATCAATGGTCGGTTTGGAACTTTGACTGCAGTGCCTATTCATCATCTG : GACCGTTCTCTTGACTTTCATGCATTATGTGCACTGTATGCTGTAACTG : ATGTAGCGTTGGTTACCTCTTTAAGAGATGGCATGAACCTCGTCAGCTATGAATTTGTAGCCTGCCAAGAGTTGAAAAAAGGGGTCCTTATTCTCAGCGAA : TTTGCTGGTGCTGCACAATCGTTAGGTGCTGGAGCAATTCTGGTGAATCCATGGAATATAACAGAGGTTGCTGCTTCGATTGGGCAAGCTTTAAATATGTCAGCTGAAGAAAGAGAAAAACGCCACAGGCATAACTTTCTGCATGTGACTACGCATACTG : CTCAAAGTCATCTCAGAATAGGAACAGACCAGTTTCAAACTCGGATAAGAAGACTTCCAATGGGCGACGGCCCTCACCTGAAAATGTGTCATGGAATGTGCTGGATCTGAAGAAGGAGAATTACTTCTCTTGTGCAGTTGGAAGGACTCGTACAAACGCTCGGTATCTGCTCAGTACGCCAGACGACGTTGTTGCTTTTCTAAGGGAACTAGCTGAAGCACCTATTTCAAATGGGACATCATGAAAAAGAAGGATAGATGATGCCTGGTTGCATCAAGTGATGAATGATCAGTACCAAGTTCTTGGTTGAGGGAGATTTGTATGGGATGATATTGAATAAACGTTTTATACCTTTACTTTGGATATAGATGTTTGCATTCAAAAGTTTACAAAGTAG</gDNA_template>
            <first_frame> R  S  C  *  C  S  S  W :   C  E  G  V  *  G  *  M  D  W  L  G  R  C  E  C  A  R  *  G  W  A  E  G  T  Y  *  G  T  G  R  K   : E  V  Y  P  C  I  P  G  *  R  N  C  S  S  V  L  Q  R  L  L  Q  Q  Y  I  V  A  S  F  P  L  S  W  T  S  A  R  R  P  P  C  D  Y  Q  K  F  P  V  S  V  C  C  L  *  E  S  K  S  N  V  C  *  C  C  E  *  T  L  R  R  R  *  C  G  M  V  S  *  L  P  S  H  V  P  A  K  M  S  Q  G  L  Q  Q  P  N  E  S  R  L  V  S  T  H  T  L  S  I  L  G  N  T  Q  D  T  A  V  *  I  R  A  A  P  S  S  S  C  C  *  L  G  W  :  F  S  Y  L  *  L  C  K  A  F  C  *  C  M  Y  S  Y  P  G  T  *  R  N  T  *  R  S  R  R  S  R  *  T  D  P  R  C  C   : V  S  Y  W  Y  R  F  R  T  I  Y  S  S  T  *  S  Y  S  S  S  G  T  H  K  R  T  K  R  E  I  C  W  E  K   : G  Y  A  R  S  *  S  P  *  Y  D  *  R  N  S  P  K  D  P  G  I  *  E  V  P  *  R  K  S  V  L  A  *  *  S  G  F  A  S  N  C  C  A  N  K  N  R  C  S  *  I :   P  K  T  Y  Q  S  S  S  *  D  C  W  T  H  Q  W  S  V  W  N  F  D  C  S  A  Y  S  S  S   : G  P  F  S  *  L  S  C  I  M  C  T  V  C  C  N  * :   C  S  V  G  Y  L  F  K  R  W  H  E  P  R  Q  L  *  I  C  S  L  P  R  V  E  K  R  G  P  Y  S  Q  R   : I  C  W  C  C  T  I  V  R  C  W  S  N  S  G  E  S  M  E  Y  N  R  G  C  C  F  D  W  A  S  F  K  Y  V  S  *  R  K  R  K  T  P  Q  A  *  L  S  A  C  D  Y  A  Y  C :   S  K  S  S  Q  N  R  N  R  P  V  S  N  S  D  K  K  T  S  N  G  R  R  P  S  P  E  N  V  S  W  N  V  L  D  L  K  K  E  N  Y  F  S  C  A  V  G  R  T  R  T  N  A  R  Y  L  L  S  T  P  D  D  V  V  A  F  L  R  E  L  A  E  A  P  I  S  N  G  T  S  *  K  R  R  I  D  D  A  W  L  H  Q  V  M  N  D  Q  Y  Q  V  L  G  *  G  R  F  V  W  D  D  I  E  *  T  F  Y  T  F  T  L  D  I  D  V  C  I  Q  K  F  T  K  * </first_frame>
            <second_frame>  G  L  V  S  A  L  L   : G  V  K  E  F  E  A  R  W  I  G  W  A  G  V  N  V  P  D  E  A  G  Q  R  A  L  T  K  A  L  A  E  K  :  R  C  I  P  V  F  L  D  E  E  I  V  H  Q  Y  Y  N  G  Y  C  N  N  I  L  W  P  L  F  H  Y  L  G  L  P  Q  E  D  R  L  A  T  T  R  S  F  Q  S  Q  F  A  A  Y  K  K  A  N  Q  M  F  A  D  V  V  N  E  H  Y  E  E  G  D  V  V  W  C  H  D  Y  H  L  M  F  L  P  K  C  L  K  D  Y  N  S  Q  M  K  V  G  W  F  L  H  T  P  F  P  S  S  E  I  H  R  T  L  P  S  R  S  E  L  L  R  A  V  L  A  A  D  L  V  G :   F  H  T  Y  D  Y  A  R  H  F  V  S  A  C  T  R  I  L  G  L  E  G  T  P  E  G  V  E  D  Q  G  R  L  T  R  V  A  A  :  F  P  I  G  I  D  S  E  R  F  I  R  A  L  E  V  T  Q  V  Q  E  H  I  K  E  L  K  E  R  F  A  G  R  K  :  V  M  L  G  V  D  R  L  D  M  I  K  G  I  P  Q  K  I  L  A  F  E  K  F  L  E  E  N  P  Y  W  R  D  K  V  V  L  L  Q  I  A  V  P  T  R  T  D  V  P  E   : Y  Q  K  L  T  S  Q  V  H  E  I  V  G  R  I  N  G  R  F  G  T  L  T  A  V  P  I  H  H  L  :  D  R  S  L  D  F  H  A  L  C  A  L  Y  A  V  T   : D  V  A  L  V  T  S  L  R  D  G  M  N  L  V  S  Y  E  F  V  A  C  Q  E  L  K  K  G  V  L  I  L  S  E  :  F  A  G  A  A  Q  S  L  G  A  G  A  I  L  V  N  P  W  N  I  T  E  V  A  A  S  I  G  Q  A  L  N  M  S  A  E  E  R  E  K  R  H  R  H  N  F  L  H  V  T  T  H  T   : A  Q  S  H  L  R  I  G  T  D  Q  F  Q  T  R  I  R  R  L  P  M  G  D  G  P  H  L  K  M  C  H  G  M  C  W  I  *  R  R  R  I  T  S  L  V  Q  L  E  G  L  V  Q  T  L  G  I  C  S  V  R  Q  T  T  L  L  L  F  *  G  N  *  L  K  H  L  F  Q  M  G  H  H  E  K  E  G  *  M  M  P  G  C  I  K  *  *  M  I  S  T  K  F  L  V  E  G  D  L  Y  G  M  I  L  N  K  R  F  I  P  L  L  W  I  *  M  F  A  F  K  S  L  Q  S   </second_frame>
            <third_frame>   V  L  L  V  L  F  L  :  V  *  R  S  L  R  L  D  G  L  V  G  Q  V  *  M  C  Q  M  R  L  G  R  G  H  L  L  R  H  W  Q  K  R :   G  V  S  L  Y  S  W  M  K  K  L  F  I  S  I  T  T  V  T  A  T  I  Y  C  G  L  F  S  I  I  L  D  F  R  K  K  T  A  L  R  L  P  E  V  S  S  L  S  L  L  L  I  R  K  Q  I  K  C  L  L  M  L  *  M  N  I  T  K  K  V  M  W  Y  G  V  M  T  T  I  S  C  S  C  Q  N  V  S  R  I  T  T  A  K  *  K  S  V  G  F  Y  T  H  P  F  H  P  R  K  Y  T  G  H  C  R  L  D  Q  S  C  S  E  Q  F  L  L  L  T  W  L   : V  F  I  P  M  T  M  Q  G  I  L  L  V  H  V  L  V  S  W  D  L  K  E  H  L  K  E  *  K  I  K  V  D  *  P  A  L  L  R :   F  L  L  V  *  I  Q  N  D  L  F  E  H  L  K  L  L  K  F  R  N  T  *  K  N  *  K  R  D  L  L  G  E  R :   L  C  *  E  L  I  A  L  I  *  L  K  E  F  P  K  R  S  W  H  L  R  S  S  L  K  K  I  R  T  G  V  I  K  W  F  C  F  K  L  L  C  Q  Q  E  Q  M  F  L  N  :  T  K  N  L  P  V  K  F  M  R  L  L  D  A  S  M  V  G  L  E  L  *  L  Q  C  L  F  I  I  W :   T  V  L  L  T  F  M  H  Y  V  H  C  M  L  *  L  :  M  *  R  W  L  P  L  *  E  M  A  *  T  S  S  A  M  N  L  *  P  A  K  S  *  K  K  G  S  L  F  S  A  N :   L  L  V  L  H  N  R  *  V  L  E  Q  F  W  *  I  H  G  I  *  Q  R  L  L  L  R  L  G  K  L  *  I  C  Q  L  K  K  E  K  N  A  T  G  I  T  F  C  M  *  L  R  I  L  :  L  K  V  I  S  E  *  E  Q  T  S  F  K  L  G  *  E  D  F  Q  W  A  T  A  L  T  *  K  C  V  M  E  C  A  G  S  E  E  G  E  L  L  L  L  C  S  W  K  D  S  Y  K  R  S  V  S  A  Q  Y  A  R  R  R  C  C  F  S  K  G  T  S  *  S  T  Y  F  K  W  D  I  M  K  K  K  D  R  *  C  L  V  A  S  S  D  E  *  S  V  P  S  S  W  L  R  E  I  C  M  G  *  Y  *  I  N  V  L  Y  L  Y  F  G  Y  R  C  L  H  S  K  V  Y  K  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3981" stop="4002"/>
                    <exon start="4143" stop="4240"/>
                    <exon start="4401" stop="4789"/>
                    <exon start="5541" stop="5655"/>
                    <exon start="5844" stop="5945"/>
                    <exon start="7042" stop="7192"/>
                    <exon start="8216" stop="8304"/>
                    <exon start="8395" stop="8443"/>
                    <exon start="9504" stop="9604"/>
                    <exon start="10229" stop="10388"/>
                    <exon start="13019" stop="13128"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1383</number_coding_nucleotides>
                  <number_encoded_amino_acids>461</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLVSALLGVKEFEARWIGWAGVNVPDEAGQRALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKDYNSQMKVGWFLHTPFPSSEIHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEVTQVQEHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQELKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMSAEEREKRHRHNFLHVTTHTAQSHLRIGTDQFQTRIRRLPMGDGPHLKMCHGMCWI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="14447" PGL_stop="13846"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14447" e_stop="13846"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="14447" e_stop="13846" e_length="602"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14447" stop="13846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711999" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATAAAGTGGTCAACATTCCCAACAGCATGACGATTTTGGATGAGCTTCTTCCAATTTCAATCGAGATGGCAAAGCGTAATCTCACAGGCATATGGAATTTCACAAACCCTGGTGTTGTGAGCCATAACGAGATCTTGGAGATGTACAAGAAATACATAAACCCAGAATTTAAATGGTCCAACTTCACACTGGAAGAGCAGGCTAAGGTAATTGTTGCACCTCGCAGTAACAATGAAATGGACGCGTCCAAGTTGAAAAAGGAGTTCCCTGAGTTGTTGTCTATCAAAGAATCATTGATCAAAAATGTGTTTGAACCAAATAGAAAAACTTCTGCATGAGAAGCCCATCAGGATGTGGAGAGCAGACTTCTGGTTTGGATCAATATGCTACTTGACTTTCTACTCTAGTTTAGTCATTATTAGCCATCATTTTAAAATATTTAGGTTCTTACTGGTGTCTAGAATTCCTACACTTGGTCTATGTTGTCAGTTTATTTATGAGTTTAATGTGCTATAAGGTGGTTTGCGTAGGAGTTACCATTCATCTTTTATCAGCTCGGGTCGATTTGTTGGATCTTAATATATATGAAATTATGATTT</gDNA_template>
            <first_frame> T  I  K  W  S  T  F  P  T  A  *  R  F  W  M  S  F  F  Q  F  Q  S  R  W  Q  S  V  I  S  Q  A  Y  G  I  S  Q  T  L  V  L  *  A  I  T  R  S  W  R  C  T  R  N  T  *  T  Q  N  L  N  G  P  T  S  H  W  K  S  R  L  R  *  L  L  H  L  A  V  T  M  K  W  T  R  P  S  *  K  R  S  S  L  S  C  C  L  S  K  N  H  *  S  K  M  C  L  N  Q  I  E  K  L  L  H  E  K  P  I  R  M  W  R  A  D  F  W  F  G  S  I  C  Y  L  T  F  Y  S  S  L  V  I  I  S  H  H  F  K  I  F  R  F  L  L  V  S  R  I  P  T  L  G  L  C  C  Q  F  I  Y  E  F  N  V  L  *  G  G  L  R  R  S  Y  H  S  S  F  I  S  S  G  R  F  V  G  S  *  Y  I  *  N  Y  D   </first_frame>
            <second_frame>  Q  *  S  G  Q  H  S  Q  Q  H  D  D  F  G  *  A  S  S  N  F  N  R  D  G  K  A  *  S  H  R  H  M  E  F  H  K  P  W  C  C  E  P  *  R  D  L  G  D  V  Q  E  I  H  K  P  R  I  *  M  V  Q  L  H  T  G  R  A  G  *  G  N  C  C  T  S  Q  *  Q  *  N  G  R  V  Q  V  E  K  G  V  P  *  V  V  V  Y  Q  R  I  I  D  Q  K  C  V  *  T  K  *  K  N  F  C  M  R  S  P  S  G  C  G  E  Q  T  S  G  L  D  Q  Y  A  T  *  L  S  T  L  V  *  S  L  L  A  I  I  L  K  Y  L  G  S  Y  W  C  L  E  F  L  H  L  V  Y  V  V  S  L  F  M  S  L  M  C  Y  K  V  V  C  V  G  V  T  I  H  L  L  S  A  R  V  D  L  L  D  L  N  I  Y  E  I  M  I  </second_frame>
            <third_frame>   N  K  V  V  N  I  P  N  S  M  T  I  L  D  E  L  L  P  I  S  I  E  M  A  K  R  N  L  T  G  I  W  N  F  T  N  P  G  V  V  S  H  N  E  I  L  E  M  Y  K  K  Y  I  N  P  E  F  K  W  S  N  F  T  L  E  E  Q  A  K  V  I  V  A  P  R  S  N  N  E  M  D  A  S  K  L  K  K  E  F  P  E  L  L  S  I  K  E  S  L  I  K  N  V  F  E  P  N  R  K  T  S  A  *  E  A  H  Q  D  V  E  S  R  L  L  V  W  I  N  M  L  L  D  F  L  L  *  F  S  H  Y  *  P  S  F  *  N  I  *  V  L  T  G  V  *  N  S  Y  T  W  S  M  L  S  V  Y  L  *  V  *  C  A  I  R  W  F  A  *  E  L  P  F  I  F  Y  Q  L  G  S  I  C  W  I  L  I  Y  M  K  L  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14445" stop="14107"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKKYINPEFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKNVFEPNRKTSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="17240" PGL_stop="14729"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17240" e_stop="17054"/>
            <exon e_start="16260" e_stop="14729"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.869" e_score="0.893"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.893">
            <gDNA_exon_boundary e_start="17240" e_stop="17054" e_length="187"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.869">
            <gDNA_intron_boundary i_start="17053" i_stop="16261" i_length="793"/>
          </intron>
          <exon e_serial="2" e_score="0.963">
            <gDNA_exon_boundary e_start="16260" e_stop="14729" e_length="1532"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17240" stop="17054"/>
              <exon start="16260" stop="15998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17160" stop="17054"/>
              <exon start="16260" stop="15816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17160" stop="17054"/>
              <exon start="16260" stop="15861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17158" stop="17054"/>
              <exon start="16260" stop="15663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17146" stop="17054"/>
              <exon start="16260" stop="15953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17144" stop="17054"/>
              <exon start="16260" stop="15843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17133" stop="17054"/>
              <exon start="16260" stop="16033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16247" stop="15815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15930" stop="15326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456718" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15873" stop="15206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15678" stop="15083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15616" stop="15255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15583" stop="15131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15558" stop="15019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446210" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15484" stop="14898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15411" stop="14811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572852" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15393" stop="14807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15342" stop="14763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15255" stop="14729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15168" stop="14758"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447543" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGATTTTTTTTTGCATGAGAGAGGGTTTTTGCGGGTATAAATACACAAACAACAAGATACTTGACTCTCATCAATACACGCTTTCTCTCTCTAAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAATCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATC : GGTTTAAGTTGCTGTTAAGCTCTGAATATATTTGATCGACATCAAAATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAGACTGATGAAGATGCTGTTGTAGGAAATCATGAAGCATCGCAACTTCTCCCCACAAACCCATATTCAGCCACGAAAGCTGGAGCTGAAATGCTTGTTATGGCATATGCAAGATCATATGGATTGCCTGTTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTAGCTTTGAATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAAGAGAATGGTTTACTGATGATGAATTTTGCAACCGGTTGCATATTCGAATATGATG</gDNA_template>
            <first_frame> F  D  F  F  L  H  E  R  G  F  L  R  V  *  I  H  K  Q  Q  D  T  *  L  S  S  I  H  A  F  S  L  *  K  I  F  Y  V  S  H  S  L  *  E  T  Q  K  S  V  S  I  F  L  H  I  G  F  *  N  K  K  N  N   : R  F  K  L  L  L  S  S  E  Y  I  *  S  T  S  K  C  L  T  I  H  Q  R  I  Y  S  L  L  G  P  Q  G  L  L  H  L  M  L  P  T  A  L  F  G  V  T  L  I  T  I  L  W  F  L  T  S  L  I  I  A  Q  T  *  K  I  F  P  H  L  D  L  P  L  I  L  S  L  L  R  E  I  L  A  V  L  I  L  L  T  T  F  S  S  P  R  T  L  T  L  *  C  T  L  L  L  R  P  M  S  T  T  P  L  V  I  A  L  S  S  P  R  T  T  F  M  A  H  T  C  Y  *  R  H  A  K  L  L  V  R  S  E  G  L  Y  M  L  A  L  M  R  F  T  E  R  L  M  K  M  L  L  *  E  I  M  K  H  R  N  F  S  P  Q  T  H  I  Q  P  R  K  L  E  L  K  C  L  L  W  H  M  Q  D  H  M  D  C  L  L  S  P  L  E  G  T  M  C  M  V  P  I  N  F  L  R  S  *  S  Q  S  S  Y  F  *  L  *  M  G  S  L  F  R  F  T  E  M  V  Q  M  L  E  V  I  S  I  V  R  T  L  L  R  L  S  K  L  F  F  T  E  V  M  L  V  M  F  I  T  S  G  L  R  K  R  G  E  *  L  M  L  P  K  I  Y  P  I  F  L  T  R  I  Q  T  Q  A  F  S  L  W  K  T  G  P  S  M  T  R  G  I  S  *  M  I  R  S  *  R  T  W  V  G  P  R  R  P  P  G  K  R  V  *  K  K  P  W  S  G  M  S  I  I  L  I  G  G  E  M  S  L  G  H  C  F  P  I  L  E  C  *  *  C  L  V  G  *  R  E  I  R  M  E  L  K  K  M  I  L  D  H  L  R  S  Q  E  T  *  N  L  T  E  W  *  F  Q  L  P  R  S  A  T  P  L  V  D  H  L  I  S  F  *  F  M  V  E  L  G  G  L  V  V  S  *  A  N  C  V  R  N  R  E  F  L  M  S  M  E  R  D  V  W  R  I  A  H  N  F  C  Q  T  F  M  L  *  S  P  H  M  Y  S  M  L  L  V  S  L  V  G  P  M  L  I  G  V  R  V  I  R  L  K  Q  S  V  Q  M  L  L  E  L  *  T  W  Q  M  F  V  K  R  M  V  Y  *  *  *  I  L  Q  P  V  A  Y  S  N  M  M </first_frame>
            <second_frame>  L  I  F  F  C  M  R  E  G  F  C  G  Y  K  Y  T  N  N  K  I  L  D  S  H  Q  Y  T  L  S  L  S  K  K  S  F  T  F  L  T  L  C  E  K  L  K  N  L  Y  P  Y  F  Y  I  L  G  S  E  T  K  K  I  I  :  G  L  S  C  C  *  A  L  N  I  F  D  R  H  Q  N  V  *  L  Y  T  K  E  Y  T  H  Y  W  G  R  R  V  Y  C  I  S  C  C  Q  P  P  C  S  E  L  P  *  L  Q  Y  C  G  S  *  Q  A  *  L  L  L  K  P  E  K  S  F  P  I  S  I  F  P  *  F  *  V  C  *  G  R  Y  W  Q  C  *  S  C  *  L  P  S  H  H  R  E  H  *  H  Y  N  A  L  C  C  S  D  P  C  R  Q  L  L  W  *  *  L  *  V  H  Q  E  Q  H  L  W  H  T  R  A  I  R  G  M  Q  S  Y  W  S  D  Q  K  V  Y  T  C  *  H  *  *  G  L  R  R  D  *  *  R  C  C  C  R  K  S  *  S  I  A  T  S  P  H  K  P  I  F  S  H  E  S  W  S  *  N  A  C  Y  G  I  C  K  I  I  W  I  A  C  Y  H  H  *  R  E  Q  C  V  W  S  Q  S  I  S  *  E  A  N  P  K  V  H  T  F  S  F  E  W  E  A  S  S  D  S  R  R  W  F  K  C  *  K  L  S  L  L  *  G  R  C  *  G  F  R  S  C  S  S  P  R  *  C  W  S  C  L  *  H  R  D  *  E  R  E  A  S  D  *  C  C  Q  R  Y  I  Q  S  F  *  Q  G  S  R  H  K  H  S  V  C  G  K  Q  A  L  Q  *  P  E  V  F  P  R  *  S  E  V  E  E  P  G  L  V  R  E  D  H  L  G  R  G  S  E  K  N  H  G  V  V  C  Q  *  S  *  L  V  G  R  C  L  W  G  I  A  S  P  S  *  N  A  D  D  A  W  W  G  R  E  K  F  G  W  S  *  K  R  *  F  W  I  I  *  D  L  R  K  H  E  T  *  R  N  G  S  S  S  F  Q  D  Q  Q  L  P  *  *  I  T  L  *  V  F  D  L  W  *  N  W  V  D  W  W  S  P  K  Q  T  V  *  E  T  G  N  S  L  *  V  W  K  G  T  S  G  G  S  L  T  T  F  V  R  H  S  C  C  E  A  H  T  C  I  Q  C  C  W  C  H  W  *  A  Q  C  *  L  V  *  E  S  *  D  *  N  N  P  Y  K  C  C  W  N  S  K  L  G  R  C  L  *  R  E  W  F  T  D  D  E  F  C  N  R  L  H  I  R  I  *   </second_frame>
            <third_frame>   *  F  F  F  A  *  E  R  V  F  A  G  I  N  T  Q  T  T  R  Y  L  T  L  I  N  T  R  F  L  S  L  K  N  L  L  R  F  S  L  S  V  R  N  S  K  I  C  I  H  I  F  T  Y  W  V  L  K  Q  K  K  *  S :   V  *  V  A  V  K  L  *  I  Y  L  I  D  I  K  M  S  N  Y  T  P  K  N  I  L  I  T  G  A  A  G  F  I  A  S  H  V  A  N  R  L  V  R  S  Y  P  D  Y  N  I  V  V  L  D  K  L  D  Y  C  S  N  L  K  N  L  S  P  S  R  S  S  P  N  F  K  F  V  K  G  D  I  G  S  A  D  L  V  N  Y  L  L  I  T  E  N  I  D  T  I  M  H  F  A  A  Q  T  H  V  D  N  S  F  G  N  S  F  E  F  T  K  N  N  I  Y  G  T  H  V  L  L  E  A  C  K  V  T  G  Q  I  R  R  F  I  H  V  S  T  D  E  V  Y  G  E  T  D  E  D  A  V  V  G  N  H  E  A  S  Q  L  L  P  T  N  P  Y  S  A  T  K  A  G  A  E  M  L  V  M  A  Y  A  R  S  Y  G  L  P  V  I  T  T  R  G  N  N  V  Y  G  P  N  Q  F  P  E  K  L  I  P  K  F  I  L  L  A  L  N  G  K  P  L  P  I  H  G  D  G  S  N  V  R  S  Y  L  Y  C  E  D  V  A  E  A  F  E  V  V  L  H  R  G  D  V  G  H  V  Y  N  I  G  T  K  K  E  R  R  V  I  D  V  A  K  D  I  S  N  L  F  N  K  D  P  D  T  S  I  Q  F  V  E  N  R  P  F  N  D  Q  R  Y  F  L  D  D  Q  K  L  K  N  L  G  W  S  E  K  T  T  W  E  E  G  L  K  K  T  M  E  W  Y  V  N  N  P  D  W  W  G  D  V  S  G  A  L  L  P  H  P  R  M  L  M  M  P  G  G  V  E  R  N  S  D  G  A  E  K  D  D  S  G  S  S  E  I  S  G  N  M  K  L  N  G  M  V  V  P  A  S  K  I  S  N  S  P  S  R  S  P  Y  K  F  L  I  Y  G  R  T  G  W  I  G  G  L  L  S  K  L  C  E  K  Q  G  I  P  Y  E  Y  G  K  G  R  L  E  D  R  S  Q  L  L  S  D  I  H  A  V  K  P  T  H  V  F  N  A  A  G  V  T  G  R  P  N  V  D  W  C  E  S  H  K  T  E  T  I  R  T  N  V  A  G  T  L  N  L  A  D  V  C  K  E  N  G  L  L  M  M  N  F  A  T  G  C  I  F  E  Y  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16235" stop="14730"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1506</number_coding_nucleotides>
                  <number_encoded_amino_acids>502</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYLIDIKMSNYTPKNILITGAAGFIASHVANRLVRSYPDYNIVVLDKLDYCSNLKNLSPSRSSPNFKFVKGDIGSADLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYARSYGLPVITTRGNNVYGPNQFPEKLIPKFILLALNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHRGDVGHVYNIGTKKERRVIDVAKDISNLFNKDPDTSIQFVENRPFNDQRYFLDDQKLKNLGWSEKTTWEEGLKKTMEWYVNNPDWWGDVSGALLPHPRMLMMPGGVERNSDGAEKDDSGSSEISGNMKLNGMVVPASKISNSPSRSPYKFLIYGRTGWIGGLLSKLCEKQGIPYEYGKGRLEDRSQLLSDIHAVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLNLADVCKENGLLMMNFATGCIFEYD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17239" stop="17054"/>
                    <exon start="16260" stop="16243"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIFFCMREGFCGYKYTNNKILDSHQYTLSLSKKSFTFLTLCEKLKNLYPYFYILGSETKKIIGLSCC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="24015" PGL_stop="26980"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24015" e_stop="24090"/>
            <exon e_start="25666" e_stop="25702"/>
            <exon e_start="25825" e_stop="26041"/>
            <exon e_start="26141" e_stop="26299"/>
            <exon e_start="26390" e_stop="26511"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.995"/>
          <exon-intron don_prob="0.832" acc_prob="0.804" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24015" e_stop="24090" e_length="76"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="24091" i_stop="25665" i_length="1575"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25666" e_stop="25702" e_length="37"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.988">
            <gDNA_intron_boundary i_start="25703" i_stop="25824" i_length="122"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="25825" e_stop="26041" e_length="217"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26042" i_stop="26140" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26141" e_stop="26299" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.832" acc_prob="0.804">
            <gDNA_intron_boundary i_start="26300" i_stop="26389" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26390" e_stop="26511" e_length="122"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24015" stop="24090"/>
              <exon start="25666" stop="25702"/>
              <exon start="25825" stop="26041"/>
              <exon start="26141" stop="26299"/>
              <exon start="26390" stop="26511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310865" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATTCTAAAATTTGATGGTTTCTTTGGCTTCGTCTCAAGTTCTTGCAATCTGTAAAGATGCAGCTGGAATCGCCG : GGAATATCTTTGCTTTTGGATTGTTTTTGTCTCCAAT : GCCTACATTCATGAGAATAATGAGGAATCAATCAACTGAACAGTTCTCAGGGTTGCCGTACATCTATGGTCTATTGAACTGCTTAATTTGTGCCTGGTATGGCACCCCTCTCGTATCTCCCGACAATTTGTTGGTTACATCAGTTAATTCAGTTGGTGCTGTTTTTCAACTTGCCTACATTGTACTTTACGTAACGTATACAGAGAAAGAGAAAAAG : TTCAGGATGTTTGGATGGATACTCACAGTCTTTGGCCTATTTGTTATTATTGTACTTGGAAGCTTGTTTATACTTGATCTGGAACTCCGACGCATCATCATTGGCTCCCTGAGTTGTGCTTCCTTGATATCAATGTTTGCCTCCCCACTGTTAATTATT : AATCTGGTGATCAGGACCAGGAGTGTTGAATTCATGCCGTTTTGTCTGTCCCTCTCCACCTTCCTAATGAGTGCCTCTTTCCTTTTGTATGGAATTTTCAGTTCTGATCCCTTTATATATGT</gDNA_template>
            <first_frame> L  F  *  N  L  M  V  S  L  A  S  S  Q  V  L  A  I  C  K  D  A  A  G  I  A   : G  N  I  F  A  F  G  L  F  L  S  P  M :   P  T  F  M  R  I  M  R  N  Q  S  T  E  Q  F  S  G  L  P  Y  I  Y  G  L  L  N  C  L  I  C  A  W  Y  G  T  P  L  V  S  P  D  N  L  L  V  T  S  V  N  S  V  G  A  V  F  Q  L  A  Y  I  V  L  Y  V  T  Y  T  E  K  E  K  K  :  F  R  M  F  G  W  I  L  T  V  F  G  L  F  V  I  I  V  L  G  S  L  F  I  L  D  L  E  L  R  R  I  I  I  G  S  L  S  C  A  S  L  I  S  M  F  A  S  P  L  L  I  I  :  N  L  V  I  R  T  R  S  V  E  F  M  P  F  C  L  S  L  S  T  F  L  M  S  A  S  F  L  L  Y  G  I  F  S  S  D  P  F  I  Y   </first_frame>
            <second_frame>  Y  S  K  I  *  W  F  L  W  L  R  L  K  F  L  Q  S  V  K  M  Q  L  E  S  P  :  G  I  S  L  L  L  D  C  F  C  L  Q   : C  L  H  S  *  E  *  *  G  I  N  Q  L  N  S  S  Q  G  C  R  T  S  M  V  Y  *  T  A  *  F  V  P  G  M  A  P  L  S  Y  L  P  T  I  C  W  L  H  Q  L  I  Q  L  V  L  F  F  N  L  P  T  L  Y  F  T  *  R  I  Q  R  K  R  K  S :   S  G  C  L  D  G  Y  S  Q  S  L  A  Y  L  L  L  L  Y  L  E  A  C  L  Y  L  I  W  N  S  D  A  S  S  L  A  P  *  V  V  L  P  *  Y  Q  C  L  P  P  H  C  *  L  L :   I  W  *  S  G  P  G  V  L  N  S  C  R  F  V  C  P  S  P  P  S  *  *  V  P  L  S  F  C  M  E  F  S  V  L  I  P  L  Y  M  </second_frame>
            <third_frame>   I  L  K  F  D  G  F  F  G  F  V  S  S  S  C  N  L  *  R  C  S  W  N  R  R :   E  Y  L  C  F  W  I  V  F  V  S  N  :  A  Y  I  H  E  N  N  E  E  S  I  N  *  T  V  L  R  V  A  V  H  L  W  S  I  E  L  L  N  L  C  L  V  W  H  P  S  R  I  S  R  Q  F  V  G  Y  I  S  *  F  S  W  C  C  F  S  T  C  L  H  C  T  L  R  N  V  Y  R  E  R  E  K   : V  Q  D  V  W  M  D  T  H  S  L  W  P  I  C  Y  Y  C  T  W  K  L  V  Y  T  *  S  G  T  P  T  H  H  H  W  L  P  E  L  C  F  L  D  I  N  V  C  L  P  T  V  N  Y   : *  S  G  D  Q  D  Q  E  C  *  I  H  A  V  L  S  V  P  L  H  L  P  N  E  C  L  F  P  F  V  W  N  F  Q  F  *  S  L  Y  I  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24024" stop="24090"/>
                    <exon start="25666" stop="25702"/>
                    <exon start="25825" stop="26041"/>
                    <exon start="26141" stop="26299"/>
                    <exon start="26390" stop="26509"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLMVSLASSQVLAICKDAAGIAGNIFAFGLFLSPMPTFMRIMRNQSTEQFSGLPYIYGLLNCLICAWYGTPLVSPDNLLVTSVNSVGAVFQLAYIVLYVTYTEKEKKFRMFGWILTVFGLFVIIVLGSLFILDLELRRIIIGSLSCASLISMFASPLLIINLVIRTRSVEFMPFCLSLSTFLMSASFLLYGIFSSDPFIY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="26036" e_stop="26041"/>
            <exon e_start="26146" e_stop="26299"/>
            <exon e_start="26390" e_stop="26509"/>
            <exon e_start="26600" e_stop="26770"/>
            <exon e_start="26881" e_stop="26980"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.832" acc_prob="0.804" e_score="1.000"/>
          <exon-intron don_prob="0.440" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26036" e_stop="26041" e_length="6"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26042" i_stop="26145" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26146" e_stop="26299" e_length="154"/>
          </exon>
          <intron i_serial="2" don_prob="0.832" acc_prob="0.804">
            <gDNA_intron_boundary i_start="26300" i_stop="26389" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26390" e_stop="26509" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.440" acc_prob="0.761">
            <gDNA_intron_boundary i_start="26510" i_stop="26599" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26600" e_stop="26770" e_length="171"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.979">
            <gDNA_intron_boundary i_start="26771" i_stop="26880" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26881" e_stop="26980" e_length="100"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26036" stop="26041"/>
              <exon start="26146" stop="26299"/>
              <exon start="26390" stop="26509"/>
              <exon start="26600" stop="26770"/>
              <exon start="26881" stop="26980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289147" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAG : GATGTTTGGATGGATACTCACAGTCTTTGGCCTATTTGTTATTATTGTACTTGGAAGCTTGTTTATACTTGATCTGGAACTCCGACGCATCATCATTGGCTCCCTGAGTTGTGCTTCCTTGATATCAATGTTTGCCTCCCCACTGTTAATTATT : AATCTGGTGATCAGGACCAGGAGTGTTGAATTCATGCCGTTTTGTCTGTCCCTCTCCACCTTCCTAATGAGTGCCTCTTTCCTTTTGTATGGAATTTTCAGTTCTGATCCCTTTATATAT : GTACCAAATGGCATTGGAACACTTTTAGGAGTTACACAATTGCTTTTATTTGCACATTACAGAAATTCTTCAAGAGAGGACTCTGCCGAAGGCCTTATAGTATCTTATTCATGAACTAGAATTCTAAGAAAGTAGTGTCTTTTGTGCATGAAAAAACACCCAGGAGGAAAG : GTGATCGTAAAATCTCACTTGATTGCATGGAGAAATGGTGAGAATTCCAAGCTCAAGGTGATGGCAGTTCCCTAGTCATTGAACTCGTTCAGCTATACCT</gDNA_template>
            <first_frame> K  K  :  D  V  W  M  D  T  H  S  L  W  P  I  C  Y  Y  C  T  W  K  L  V  Y  T  *  S  G  T  P  T  H  H  H  W  L  P  E  L  C  F  L  D  I  N  V  C  L  P  T  V  N  Y   : *  S  G  D  Q  D  Q  E  C  *  I  H  A  V  L  S  V  P  L  H  L  P  N  E  C  L  F  P  F  V  W  N  F  Q  F  *  S  L  Y  I   : C  T  K  W  H  W  N  T  F  R  S  Y  T  I  A  F  I  C  T  L  Q  K  F  F  K  R  G  L  C  R  R  P  Y  S  I  L  F  M  N  *  N  S  K  K  V  V  S  F  V  H  E  K  T  P  R  R  K   : G  D  R  K  I  S  L  D  C  M  E  K  W  *  E  F  Q  A  Q  G  D  G  S  S  L  V  I  E  L  V  Q  L  Y   </first_frame>
            <second_frame>  K  R :   M  F  G  W  I  L  T  V  F  G  L  F  V  I  I  V  L  G  S  L  F  I  L  D  L  E  L  R  R  I  I  I  G  S  L  S  C  A  S  L  I  S  M  F  A  S  P  L  L  I  I  :  N  L  V  I  R  T  R  S  V  E  F  M  P  F  C  L  S  L  S  T  F  L  M  S  A  S  F  L  L  Y  G  I  F  S  S  D  P  F  I  Y  :  V  P  N  G  I  G  T  L  L  G  V  T  Q  L  L  L  F  A  H  Y  R  N  S  S  R  E  D  S  A  E  G  L  I  V  S  Y  S  *  T  R  I  L  R  K  *  C  L  L  C  M  K  K  H  P  G  G  K  :  V  I  V  K  S  H  L  I  A  W  R  N  G  E  N  S  K  L  K  V  M  A  V  P  *  S  L  N  S  F  S  Y  T  </second_frame>
            <third_frame>   K   : G  C  L  D  G  Y  S  Q  S  L  A  Y  L  L  L  L  Y  L  E  A  C  L  Y  L  I  W  N  S  D  A  S  S  L  A  P  *  V  V  L  P  *  Y  Q  C  L  P  P  H  C  *  L  L :   I  W  *  S  G  P  G  V  L  N  S  C  R  F  V  C  P  S  P  P  S  *  *  V  P  L  S  F  C  M  E  F  S  V  L  I  P  L  Y  M :   Y  Q  M  A  L  E  H  F  *  E  L  H  N  C  F  Y  L  H  I  T  E  I  L  Q  E  R  T  L  P  K  A  L  *  Y  L  I  H  E  L  E  F  *  E  S  S  V  F  C  A  *  K  N  T  Q  E  E  R :   *  S  *  N  L  T  *  L  H  G  E  M  V  R  I  P  S  S  R  *  W  Q  F  P  S  H  *  T  R  S  A  I  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26037" stop="26041"/>
                    <exon start="26146" stop="26299"/>
                    <exon start="26390" stop="26509"/>
                    <exon start="26600" stop="26713"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRMFGWILTVFGLFVIIVLGSLFILDLELRRIIIGSLSCASLISMFASPLLIINLVIRTRSVEFMPFCLSLSTFLMSASFLLYGIFSSDPFIYVPNGIGTLLGVTQLLLFAHYRNSSREDSAEGLIVSYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="29108" PGL_stop="37061"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29108" e_stop="29213"/>
            <exon e_start="29761" e_stop="30407"/>
            <exon e_start="30486" e_stop="30649"/>
            <exon e_start="31263" e_stop="31363"/>
            <exon e_start="31514" e_stop="31653"/>
            <exon e_start="35517" e_stop="35570"/>
            <exon e_start="36710" e_stop="37061"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="1.000" e_score="0.998"/>
          <exon-intron don_prob="0.986" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.795" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29108" e_stop="29213" e_length="106"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="29761" e_stop="30407" e_length="647"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="30486" e_stop="30649" e_length="164"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.988">
            <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31263" e_stop="31363" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.795" acc_prob="1.000">
            <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31514" e_stop="31653" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="35517" e_stop="35570" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.999">
            <gDNA_intron_boundary i_start="35571" i_stop="36709" i_length="1139"/>
          </intron>
          <exon e_serial="7" e_score="0.983">
            <gDNA_exon_boundary e_start="36710" e_stop="37061" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29108" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29119" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30649"/>
              <exon start="31263" stop="31363"/>
              <exon start="31514" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="36987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29121" stop="29213"/>
              <exon start="29761" stop="30136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29129" stop="29213"/>
              <exon start="29761" stop="30222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29129" stop="29213"/>
              <exon start="29761" stop="30027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29130" stop="29213"/>
              <exon start="29761" stop="30090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29131" stop="29213"/>
              <exon start="29761" stop="29989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29136" stop="29213"/>
              <exon start="29761" stop="30247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29136" stop="29213"/>
              <exon start="29761" stop="30223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29137" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29137" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29137" stop="29213"/>
              <exon start="29761" stop="30174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29139" stop="29213"/>
              <exon start="29761" stop="30168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29142" stop="29213"/>
              <exon start="29761" stop="30235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29143" stop="29213"/>
              <exon start="29761" stop="30134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29155" stop="29213"/>
              <exon start="29761" stop="30260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29156" stop="29213"/>
              <exon start="29761" stop="30117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29769" stop="30407"/>
              <exon start="30486" stop="30514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29769" stop="30222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29789" stop="30398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30575" stop="30649"/>
              <exon start="31263" stop="31363"/>
              <exon start="31514" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="36868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605278" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30612" stop="30649"/>
              <exon start="31263" stop="31363"/>
              <exon start="31514" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="36911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415616" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30619" stop="30649"/>
              <exon start="31263" stop="31363"/>
              <exon start="31514" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="36994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452177" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31301" stop="31363"/>
              <exon start="31514" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="36936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31593" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="37061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31593" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="37061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31593" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="37060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31611" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36710" stop="36994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220396" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAGTCCTTGGAAGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG : ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAG : GGCAGCTATTGAGAATGAGAAGAAAGGATACGCAGAAAACTATGAATATGGTCAGGTTATGGAGAAAAAATTGCTAGCTATGGCTCGAGAACTTGAAAAACTTCGAGCTGAGGTTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAG : GTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCT : GTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG : GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG : GCAGAATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATTCTTACTGTATGGTATTTTAAAAACTTGACTAAAAAAAATTCGTACTAGTATTTTATATATGGTTTTAAAAACCGTTAG</gDNA_template>
            <first_frame> F  S  P  W  K  R  S  V  H  S  A  M  A  E  Y  G  A  F  H  N  *  Q  F  N  I  A  F  I  R  F  V  Q  L  L  L   : D  I  F  D  H  F  I  T  K  T  R  *  N  K  E  D  G  R  S  E  S  R  A  S  T  S  Y  E  R  W  S  S  W  W  T  S  S  T  N  A  *  A  P  V  C  *  G  S  L  A  G  A  S  S  S  N  A  *  R  N  E  R  I  T  V  W  N  G  L  Q  T  N  A  S  T  P  C  C  S  *  G  T  P  G  *  S  A  *  *  D  S  R  I  I  S  *  *  P  E  V  S  C  Y  S  C  S  T  E  T  R  S  R  S  C  S  I  R  T  S  A  N  *  S  L  C  P  F  F  A  Y  G  N  *  C  A  N  E  R  A  L  *  E  V  C  *  V  G  N  G  S  P  S  S  *  W  Y  E  V  R  A  Y  A  S  A  L  G  Y  *  G  V  Y  C  C  Q  T  R  S  Y  C  *  V  S  K  N  D  T  G  F  E  *  N  D  C  R  F  T  A  G  S  S  N  *  S  *  K  *  R  S  K  T  R  A  A  A  S  K  :  G  S  Y  *  E  *  E  E  R  I  R  R  K  L  *  I  W  S  G  Y  G  E  K  I  A  S  Y  G  S  R  T  *  K  T  S  S  *  G  C  *  C  R  K  K  S  P  S  S  S  S  C  C  E  S  R :   C  R  V  Q  C  K  L  W  E  S  *  I  W  L  S  R  E  L  L  S  C  *  L  R  N  E  S  Y  E  P  C  S  S   : C  A  G  W  C  *  R  L  F  S  V  W  T  W  A  W  C  L  G  W  L  *  C  A  A  S  S  R  T  Q  I  N  *  L  M  *  A  V  T  R  C  C  A  Y  Y  S  L  :  V  I  I  N  V  *  M  S  S  S  T  T  Q  A  *  N  F  W  :  A  E  S  A  A  K  V  V  T  Y  I  Q  S  G  K  A  I  D  L  S  Q  L  F  C  N  L  C  Y  Q  V  *  Q  L  T  A  M  *  I  F  Q  H  Y  L  F  F  E  Q  I  S  G  H  I  Y  I  S  L  *  I  V  M  L  F  C  G  S  F  F  S  P  T  P  N  *  L  S  Y  L  V  G  N  Q  K  *  *  K  F  D  Y  Q  K  N  S  Y  C  M  V  F  *  K  L  D  *  K  K  F  V  L  V  F  Y  I  W  F  *  K  P  L  </first_frame>
            <second_frame>  L  V  L  G  S  A  A  F  I  L  L  W  L  N  T  V  L  F  T  I  N  S  L  T  S  P  S  S  D  L  F  S  S  F  *  :  I  Y  L  I  I  S  *  P  R  Q  D  K  T  K  K  M  A  G  R  N  R  G  P  P  L  P  M  K  G  G  P  H  G  G  L  P  P  P  M  H  E  P  Q  F  A  R  G  R  L  P  V  P  H  P  A  M  L  E  E  M  R  E  S  Q  F  G  M  G  S  R  P  M  P  P  H  P  A  V  L  E  E  H  L  A  S  Q  H  D  E  I  Q  G  L  L  V  D  N  Q  R  L  A  A  T  H  V  A  L  K  Q  E  V  E  A  A  Q  Y  E  L  Q  R  T  D  H  Y  A  R  S  L  R  M  E  T  D  V  Q  M  R  E  L  Y  E  K  S  A  K  L  E  M  D  L  Q  V  A  D  G  M  R  S  E  L  M  R  V  R  S  D  I  K  E  F  T  A  A  R  Q  D  L  T  V  E  Y  Q  R  M  T  Q  D  L  S  R  M  T  A  D  L  Q  Q  A  P  A  I  K  A  E  S  E  G  L  K  Q  E  L  Q  R  A  R :   A  A  I  E  N  E  K  K  G  Y  A  E  N  Y  E  Y  G  Q  V  M  E  K  K  L  L  A  M  A  R  E  L  E  K  L  R  A  E  V  A  N  A  E  K  R  A  R  A  A  A  A  V  A  N  P   : G  A  G  Y  N  A  N  Y  G  N  P  E  S  G  Y  P  G  N  Y  Y  P  A  N  Y  G  M  N  P  M  N  P  A  H  P  :  V  Q  G  G  A  E  G  Y  S  Q  Y  G  H  G  P  G  A  W  G  G  Y  D  V  Q  R  A  Q  G  P  R  *  T  S  *  C  R  L  S  H  G  V  V  P  T  T  L  W :   L  *  S  M  S  K  *  V  H  R  R  H  K  H  E  I  F  G :   Q  N  P  R  L  K  W  L  L  I  F  S  L  A  R  Q  S  I  Y  L  S  Y  F  A  T  C  A  I  K  C  S  S  *  Q  Q  C  R  F  S  S  T  T  C  F  L  N  K  F  L  G  I  F  I  S  P  C  E  L  *  C  Y  F  V  A  P  F  S  V  L  L  Q  I  S  Y  P  T  L  L  A  I  K  N  S  E  N  L  I  I  K  K  I  L  T  V  W  Y  F  K  N  L  T  K  K  N  S  Y  *  Y  F  I  Y  G  F  K  N  R  * </second_frame>
            <third_frame>   *  S  L  E  A  Q  R  S  F  C  Y  G  *  I  R  C  F  S  Q  L  T  V  *  H  R  L  H  Q  I  C  S  A  P  F  R :   Y  I  *  S  F  H  N  Q  D  K  I  K  Q  R  R  W  P  V  G  I  A  G  L  H  F  L  *  K  V  V  L  M  V  D  F  L  H  Q  C  M  S  P  S  L  L  G  V  A  C  R  C  L  I  Q  Q  C  L  K  K  *  E  N  H  S  L  E  W  A  P  D  Q  C  L  H  T  L  L  F  L  R  N  T  W  L  V  S  M  M  R  F  K  D  Y  *  L  I  T  R  G  *  L  L  L  M  *  H  *  N  K  K  *  K  L  L  N  T  N  F  S  E  L  I  I  M  P  V  L  C  V  W  K  L  M  C  K  *  E  S  F  M  R  S  L  L  S  W  K  W  I  S  K  *  L  M  V  *  G  Q  S  L  C  E  C  A  R  I  L  R  S  L  L  L  P  D  K  I  L  L  L  S  I  K  E  *  H  R  I  *  V  E  *  L  Q  I  Y  S  R  L  Q  Q  L  K  L  K  V  K  V  *  N  K  S  C  S  E  Q   : G  Q  L  L  R  M  R  R  K  D  T  Q  K  T  M  N  M  V  R  L  W  R  K  N  C  *  L  W  L  E  N  L  K  N  F  E  L  R  L  L  M  Q  K  K  E  P  E  Q  Q  Q  L  L  R  I  Q  :  V  Q  G  T  M  Q  I  M  G  I  L  N  L  V  I  Q  G  I  I  I  L  L  I  T  E  *  I  L  *  T  L  L  I  L :   C  R  V  V  L  K  V  I  L  S  M  D  M  G  L  V  L  G  V  V  M  M  C  S  E  L  K  D  P  D  K  L  V  N  V  G  C  H  T  V  L  C  L  L  L  S   : G  Y  N  Q  C  L  N  E  F  I  D  D  T  S  M  K  F  L   : G  R  I  R  G  *  S  G  Y  L  Y  S  V  W  Q  G  N  R  F  I  S  V  I  L  Q  L  V  L  S  S  V  A  V  N  S  N  V  D  F  P  A  L  P  V  F  *  T  N  F  W  A  Y  L  Y  L  L  V  N  C  N  A  I  L  W  L  L  F  Q  S  Y  S  K  L  V  I  L  P  C  W  Q  S  K  I  V  K  I  *  L  S  K  K  F  L  L  Y  G  I  L  K  T  *  L  K  K  I  R  T  S  I  L  Y  M  V  L  K  T  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29782" stop="30407"/>
                    <exon start="30486" stop="30649"/>
                    <exon start="31263" stop="31363"/>
                    <exon start="31514" stop="31606"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>981</number_coding_nucleotides>
                  <number_encoded_amino_acids>327</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRQDKTKKMAGRNRGPPLPMKGGPHGGLPPPMHEPQFARGRLPVPHPAMLEEMRESQFGMGSRPMPPHPAVLEEHLASQHDEIQGLLVDNQRLAATHVALKQEVEAAQYELQRTDHYARSLRMETDVQMRELYEKSAKLEMDLQVADGMRSELMRVRSDIKEFTAARQDLTVEYQRMTQDLSRMTADLQQAPAIKAESEGLKQELQRARAAIENEKKGYAENYEYGQVMEKKLLAMARELEKLRAEVANAEKRARAAAAVANPGAGYNANYGNPESGYPGNYYPANYGMNPMNPAHPVQGGAEGYSQYGHGPGAWGGYDVQRAQGPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29108" e_stop="29213"/>
            <exon e_start="29761" e_stop="30407"/>
            <exon e_start="30486" e_stop="30649"/>
            <exon e_start="31263" e_stop="31363"/>
            <exon e_start="31514" e_stop="31653"/>
            <exon e_start="35517" e_stop="35570"/>
            <exon e_start="36714" e_stop="36983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="1.000" e_score="0.998"/>
          <exon-intron don_prob="0.986" acc_prob="0.988" e_score="0.970"/>
          <exon-intron don_prob="0.795" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.400" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29108" e_stop="29213" e_length="106"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="29214" i_stop="29760" i_length="547"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="29761" e_stop="30407" e_length="647"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30408" i_stop="30485" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="0.970">
            <gDNA_exon_boundary e_start="30486" e_stop="30649" e_length="164"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.988">
            <gDNA_intron_boundary i_start="30650" i_stop="31262" i_length="613"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31263" e_stop="31363" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.795" acc_prob="1.000">
            <gDNA_intron_boundary i_start="31364" i_stop="31513" i_length="150"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31514" e_stop="31653" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="31654" i_stop="35516" i_length="3863"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="35517" e_stop="35570" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.970" acc_prob="0.400">
            <gDNA_intron_boundary i_start="35571" i_stop="36713" i_length="1143"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="36714" e_stop="36983" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29108" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29121" stop="29213"/>
              <exon start="29761" stop="30136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29129" stop="29213"/>
              <exon start="29761" stop="30222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29129" stop="29213"/>
              <exon start="29761" stop="30027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29130" stop="29213"/>
              <exon start="29761" stop="30090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29131" stop="29213"/>
              <exon start="29761" stop="29989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29136" stop="29213"/>
              <exon start="29761" stop="30247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29136" stop="29213"/>
              <exon start="29761" stop="30223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29137" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29137" stop="29213"/>
              <exon start="29761" stop="30407"/>
              <exon start="30486" stop="30502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29137" stop="29213"/>
              <exon start="29761" stop="30174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29139" stop="29213"/>
              <exon start="29761" stop="30168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29142" stop="29213"/>
              <exon start="29761" stop="30235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29143" stop="29213"/>
              <exon start="29761" stop="30134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29155" stop="29213"/>
              <exon start="29761" stop="30260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29156" stop="29213"/>
              <exon start="29761" stop="30117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29769" stop="30407"/>
              <exon start="30486" stop="30514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29769" stop="30222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29789" stop="30398"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30360" stop="30407"/>
              <exon start="30486" stop="30649"/>
              <exon start="31263" stop="31363"/>
              <exon start="31514" stop="31653"/>
              <exon start="35517" stop="35570"/>
              <exon start="36714" stop="36983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369723" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAGTCCTTGGAAGCGCAGCGTTCATTCTGCTATGGCTGAATACGGTGCTTTTCACAATTAACAGTTTAACATCGCCTTCATCAGATTTGTTCAGCTCCTTTTAG : ATATATTTGATCATTTCATAACCAAGACAAGATAAAACAAAGAAGATGGCCGGTCGGAATCGCGGGCCTCCACTTCCTATGAAAGGTGGTCCTCATGGTGGACTTCCTCCACCAATGCATGAGCCCCAGTTTGCTAGGGGTCGCTTGCCGGTGCCTCATCCAGCAATGCTTGAAGAAATGAGAGAATCACAGTTTGGAATGGGCTCCAGACCAATGCCTCCACACCCTGCTGTTCTTGAGGAACACCTGGCTAGTCAGCATGATGAGATTCAAGGATTATTAGTTGATAACCAGAGGTTAGCTGCTACTCATGTAGCACTGAAACAAGAAGTAGAAGCTGCTCAATACGAACTTCAGCGAACTGATCATTATGCCCGTTCTTTGCGTATGGAAACTGATGTGCAAATGAGAGAGCTTTATGAGAAGTCTGCTAAGTTGGAAATGGATCTCCAAGTAGCTGATGGTATGAGGTCAGAGCTTATGCGAGTGCGCTCGGATATTAAGGAGTTTACTGCTGCCAGACAAGATCTTACTGTTGAGTATCAAAGAATGACACAGGATTTGAGTAGAATGACTGCAGATTTACAGCAGGCTCCAGCAATTAAAGCTGAAAGTGAAGGTCTAAAACAAGAGCTGCAGCGAGCAAG : GGCAGCTATTGAGAATGAGAAGAAAGGATACGCAGAAAACTATGAATATGGTCAGGTTATGGAGAAAAAATTGCTAGCTATGGCTCGAGAACTTGAAAAACTTCGAGCTGAGGTTGCTAATGCAGAAAAAAGAGCCCGAGCAGCAGCAGCTGTTGCGAATCCAG : GTGCAGGGTACAATGCAAATTATGGGAATCCTGAATCTGGTTATCCAGGGAATTATTATCCTGCTAATTACGGAATGAATCCTATGAACCCTGCTCATCCT : GTGCAGGGTGGTGCTGAAGGTTATTCTCAGTATGGACATGGGCCTGGTGCTTGGGGTGGTTATGATGTGCAGCGAGCTCAAGGACCCAGATAAACTAGTTAATGTAGGCTGTCACACGGTGTTGTGCCTACTACTCTCTG : GTTATAATCAATGTCTAAATGAGTTCATCGACGACACAAGCATGAAATTTTTGG : AATCCGCGGCTAAAGTGGTTACTTATATTCAGTCTGGCAAGGCAATCGATTTATCTCAGTTATTTTGCAACTTGTGCTATCAAGTGTAGCAGTTAACAGCAATGTAGATTTTCCAGCACTACCTGTTTTTTGAACAAATTTCTGGGCATATTTATATCTCCTTGTGAATTGTAATGCTATTTTGTGGCTCCTTTTTCAGTCCTACTCCAAATTAGTTATCCTACCTTGTTGGCAATCAAAAATAGTGAAAATTTGATTATCAAAAAAATT</gDNA_template>
            <first_frame> F  S  P  W  K  R  S  V  H  S  A  M  A  E  Y  G  A  F  H  N  *  Q  F  N  I  A  F  I  R  F  V  Q  L  L  L   : D  I  F  D  H  F  I  T  K  T  R  *  N  K  E  D  G  R  S  E  S  R  A  S  T  S  Y  E  R  W  S  S  W  W  T  S  S  T  N  A  *  A  P  V  C  *  G  S  L  A  G  A  S  S  S  N  A  *  R  N  E  R  I  T  V  W  N  G  L  Q  T  N  A  S  T  P  C  C  S  *  G  T  P  G  *  S  A  *  *  D  S  R  I  I  S  *  *  P  E  V  S  C  Y  S  C  S  T  E  T  R  S  R  S  C  S  I  R  T  S  A  N  *  S  L  C  P  F  F  A  Y  G  N  *  C  A  N  E  R  A  L  *  E  V  C  *  V  G  N  G  S  P  S  S  *  W  Y  E  V  R  A  Y  A  S  A  L  G  Y  *  G  V  Y  C  C  Q  T  R  S  Y  C  *  V  S  K  N  D  T  G  F  E  *  N  D  C  R  F  T  A  G  S  S  N  *  S  *  K  *  R  S  K  T  R  A  A  A  S  K  :  G  S  Y  *  E  *  E  E  R  I  R  R  K  L  *  I  W  S  G  Y  G  E  K  I  A  S  Y  G  S  R  T  *  K  T  S  S  *  G  C  *  C  R  K  K  S  P  S  S  S  S  C  C  E  S  R :   C  R  V  Q  C  K  L  W  E  S  *  I  W  L  S  R  E  L  L  S  C  *  L  R  N  E  S  Y  E  P  C  S  S   : C  A  G  W  C  *  R  L  F  S  V  W  T  W  A  W  C  L  G  W  L  *  C  A  A  S  S  R  T  Q  I  N  *  L  M  *  A  V  T  R  C  C  A  Y  Y  S  L  :  V  I  I  N  V  *  M  S  S  S  T  T  Q  A  *  N  F  W  :  N  P  R  L  K  W  L  L  I  F  S  L  A  R  Q  S  I  Y  L  S  Y  F  A  T  C  A  I  K  C  S  S  *  Q  Q  C  R  F  S  S  T  T  C  F  L  N  K  F  L  G  I  F  I  S  P  C  E  L  *  C  Y  F  V  A  P  F  S  V  L  L  Q  I  S  Y  P  T  L  L  A  I  K  N  S  E  N  L  I  I  K  K  I </first_frame>
            <second_frame>  L  V  L  G  S  A  A  F  I  L  L  W  L  N  T  V  L  F  T  I  N  S  L  T  S  P  S  S  D  L  F  S  S  F  *  :  I  Y  L  I  I  S  *  P  R  Q  D  K  T  K  K  M  A  G  R  N  R  G  P  P  L  P  M  K  G  G  P  H  G  G  L  P  P  P  M  H  E  P  Q  F  A  R  G  R  L  P  V  P  H  P  A  M  L  E  E  M  R  E  S  Q  F  G  M  G  S  R  P  M  P  P  H  P  A  V  L  E  E  H  L  A  S  Q  H  D  E  I  Q  G  L  L  V  D  N  Q  R  L  A  A  T  H  V  A  L  K  Q  E  V  E  A  A  Q  Y  E  L  Q  R  T  D  H  Y  A  R  S  L  R  M  E  T  D  V  Q  M  R  E  L  Y  E  K  S  A  K  L  E  M  D  L  Q  V  A  D  G  M  R  S  E  L  M  R  V  R  S  D  I  K  E  F  T  A  A  R  Q  D  L  T  V  E  Y  Q  R  M  T  Q  D  L  S  R  M  T  A  D  L  Q  Q  A  P  A  I  K  A  E  S  E  G  L  K  Q  E  L  Q  R  A  R :   A  A  I  E  N  E  K  K  G  Y  A  E  N  Y  E  Y  G  Q  V  M  E  K  K  L  L  A  M  A  R  E  L  E  K  L  R  A  E  V  A  N  A  E  K  R  A  R  A  A  A  A  V  A  N  P   : G  A  G  Y  N  A  N  Y  G  N  P  E  S  G  Y  P  G  N  Y  Y  P  A  N  Y  G  M  N  P  M  N  P  A  H  P  :  V  Q  G  G  A  E  G  Y  S  Q  Y  G  H  G  P  G  A  W  G  G  Y  D  V  Q  R  A  Q  G  P  R  *  T  S  *  C  R  L  S  H  G  V  V  P  T  T  L  W :   L  *  S  M  S  K  *  V  H  R  R  H  K  H  E  I  F  G :   I  R  G  *  S  G  Y  L  Y  S  V  W  Q  G  N  R  F  I  S  V  I  L  Q  L  V  L  S  S  V  A  V  N  S  N  V  D  F  P  A  L  P  V  F  *  T  N  F  W  A  Y  L  Y  L  L  V  N  C  N  A  I  L  W  L  L  F  Q  S  Y  S  K  L  V  I  L  P  C  W  Q  S  K  I  V  K  I  *  L  S  K  K   </second_frame>
            <third_frame>   *  S  L  E  A  Q  R  S  F  C  Y  G  *  I  R  C  F  S  Q  L  T  V  *  H  R  L  H  Q  I  C  S  A  P  F  R :   Y  I  *  S  F  H  N  Q  D  K  I  K  Q  R  R  W  P  V  G  I  A  G  L  H  F  L  *  K  V  V  L  M  V  D  F  L  H  Q  C  M  S  P  S  L  L  G  V  A  C  R  C  L  I  Q  Q  C  L  K  K  *  E  N  H  S  L  E  W  A  P  D  Q  C  L  H  T  L  L  F  L  R  N  T  W  L  V  S  M  M  R  F  K  D  Y  *  L  I  T  R  G  *  L  L  L  M  *  H  *  N  K  K  *  K  L  L  N  T  N  F  S  E  L  I  I  M  P  V  L  C  V  W  K  L  M  C  K  *  E  S  F  M  R  S  L  L  S  W  K  W  I  S  K  *  L  M  V  *  G  Q  S  L  C  E  C  A  R  I  L  R  S  L  L  L  P  D  K  I  L  L  L  S  I  K  E  *  H  R  I  *  V  E  *  L  Q  I  Y  S  R  L  Q  Q  L  K  L  K  V  K  V  *  N  K  S  C  S  E  Q   : G  Q  L  L  R  M  R  R  K  D  T  Q  K  T  M  N  M  V  R  L  W  R  K  N  C  *  L  W  L  E  N  L  K  N  F  E  L  R  L  L  M  Q  K  K  E  P  E  Q  Q  Q  L  L  R  I  Q  :  V  Q  G  T  M  Q  I  M  G  I  L  N  L  V  I  Q  G  I  I  I  L  L  I  T  E  *  I  L  *  T  L  L  I  L :   C  R  V  V  L  K  V  I  L  S  M  D  M  G  L  V  L  G  V  V  M  M  C  S  E  L  K  D  P  D  K  L  V  N  V  G  C  H  T  V  L  C  L  L  L  S   : G  Y  N  Q  C  L  N  E  F  I  D  D  T  S  M  K  F  L   : E  S  A  A  K  V  V  T  Y  I  Q  S  G  K  A  I  D  L  S  Q  L  F  C  N  L  C  Y  Q  V  *  Q  L  T  A  M  *  I  F  Q  H  Y  L  F  F  E  Q  I  S  G  H  I  Y  I  S  L  *  I  V  M  L  F  C  G  S  F  F  S  P  T  P  N  *  L  S  Y  L  V  G  N  Q  K  *  *  K  F  D  Y  Q  K  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29782" stop="30407"/>
                    <exon start="30486" stop="30649"/>
                    <exon start="31263" stop="31363"/>
                    <exon start="31514" stop="31606"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>981</number_coding_nucleotides>
                  <number_encoded_amino_acids>327</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRQDKTKKMAGRNRGPPLPMKGGPHGGLPPPMHEPQFARGRLPVPHPAMLEEMRESQFGMGSRPMPPHPAVLEEHLASQHDEIQGLLVDNQRLAATHVALKQEVEAAQYELQRTDHYARSLRMETDVQMRELYEKSAKLEMDLQVADGMRSELMRVRSDIKEFTAARQDLTVEYQRMTQDLSRMTADLQQAPAIKAESEGLKQELQRARAAIENEKKGYAENYEYGQVMEKKLLAMARELEKLRAEVANAEKRARAAAAVANPGAGYNANYGNPESGYPGNYYPANYGMNPMNPAHPVQGGAEGYSQYGHGPGAWGGYDVQRAQGPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="34336" e_stop="34969"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="34336" e_stop="34969" e_length="634"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34336" stop="34969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243334" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATGTTTGACATTAAAAGATTACAAATTATAATCCCTCTCTCTGCTAAAAGGATATTGATTTTTCTGTATATCCAAGTGTTGTAATTAAATGTCGTAAATTAGTTTAGCTGGTAAGGCAGACACTTTTCTTAGAGCTAATTCAATCGCATAAGACAGTTTCCATGTGCCATTTTACCTTTACCATCTTGTCAGCTTATTACCTTTTTTACTTTTACCATCTTATCTCATAAAATCTTGATGACTTTTGACTTAAACGGGCATTGAAATATTTGGGGCTCAAAGTCTGTTTGCAAATTTGTGATGAGCACTTCTCTTGTACCGTGTTGGTGTATCAAAGTTGATAGGTACAGAGGGACATTCTGCTATGCATTGTGTGCCAAAAATAACTTCAATCAAATGTGGTATATGGTAGCTTTCTAGTAGCGTTTGTTGTGATCCGTTCTCATTCCCTTATATTTGCTGGGAGGAGTTGCAATTTCTGTATGAACTTGCACTTGTGGATGGAAATATGAGATTTACGATAATTCATTTAACCCAAGATGGAGTTTTAAGTTATCCCAGAGCTCTTCGAAGTTCGAAGTATGACCTTAAATTGGGTTTAAAGGCAAACATTTTGAAGTGCTCTTACCTGTT</gDNA_template>
            <first_frame> Y  V  *  H  *  K  I  T  N  Y  N  P  S  L  C  *  K  D  I  D  F  S  V  Y  P  S  V  V  I  K  C  R  K  L  V  *  L  V  R  Q  T  L  F  L  E  L  I  Q  S  H  K  T  V  S  M  C  H  F  T  F  T  I  L  S  A  Y  Y  L  F  Y  F  Y  H  L  I  S  *  N  L  D  D  F  *  L  K  R  A  L  K  Y  L  G  L  K  V  C  L  Q  I  C  D  E  H  F  S  C  T  V  L  V  Y  Q  S  *  *  V  Q  R  D  I  L  L  C  I  V  C  Q  K  *  L  Q  S  N  V  V  Y  G  S  F  L  V  A  F  V  V  I  R  S  H  S  L  I  F  A  G  R  S  C  N  F  C  M  N  L  H  L  W  M  E  I  *  D  L  R  *  F  I  *  P  K  M  E  F  *  V  I  P  E  L  F  E  V  R  S  M  T  L  N  W  V  *  R  Q  T  F  *  S  A  L  T  C  </first_frame>
            <second_frame>  M  F  D  I  K  R  L  Q  I  I  I  P  L  S  A  K  R  I  L  I  F  L  Y  I  Q  V  L  *  L  N  V  V  N  *  F  S  W  *  G  R  H  F  S  *  S  *  F  N  R  I  R  Q  F  P  C  A  I  L  P  L  P  S  C  Q  L  I  T  F  F  T  F  T  I  L  S  H  K  I  L  M  T  F  D  L  N  G  H  *  N  I  W  G  S  K  S  V  C  K  F  V  M  S  T  S  L  V  P  C  W  C  I  K  V  D  R  Y  R  G  T  F  C  Y  A  L  C  A  K  N  N  F  N  Q  M  W  Y  M  V  A  F  *  *  R  L  L  *  S  V  L  I  P  L  Y  L  L  G  G  V  A  I  S  V  *  T  C  T  C  G  W  K  Y  E  I  Y  D  N  S  F  N  P  R  W  S  F  K  L  S  Q  S  S  S  K  F  E  V  *  P  *  I  G  F  K  G  K  H  F  E  V  L  L  P  V </second_frame>
            <third_frame>   C  L  T  L  K  D  Y  K  L  *  S  L  S  L  L  K  G  Y  *  F  F  C  I  S  K  C  C  N  *  M  S  *  I  S  L  A  G  K  A  D  T  F  L  R  A  N  S  I  A  *  D  S  F  H  V  P  F  Y  L  Y  H  L  V  S  L  L  P  F  L  L  L  P  S  Y  L  I  K  S  *  *  L  L  T  *  T  G  I  E  I  F  G  A  Q  S  L  F  A  N  L  *  *  A  L  L  L  Y  R  V  G  V  S  K  L  I  G  T  E  G  H  S  A  M  H  C  V  P  K  I  T  S  I  K  C  G  I  W  *  L  S  S  S  V  C  C  D  P  F  S  F  P  Y  I  C  W  E  E  L  Q  F  L  Y  E  L  A  L  V  D  G  N  M  R  F  T  I  I  H  L  T  Q  D  G  V  L  S  Y  P  R  A  L  R  S  S  K  Y  D  L  K  L  G  L  K  A  N  I  L  K  C  S  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34749" stop="34967"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSSSVCCDPFSFPYICWEELQFLYELALVDGNMRFTIIHLTQDGVLSYPRALRSSKYDLKLGLKANILKCSYL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="44557" PGL_stop="41760"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44557" e_stop="44407"/>
            <exon e_start="44315" e_stop="44160"/>
            <exon e_start="44037" e_stop="43826"/>
            <exon e_start="43725" e_stop="43624"/>
            <exon e_start="43296" e_stop="43154"/>
            <exon e_start="42766" e_stop="42054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.661" acc_prob="0.141" e_score="0.987"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.929" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="44557" e_stop="44407" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.661" acc_prob="0.141">
            <gDNA_intron_boundary i_start="44406" i_stop="44316" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44315" e_stop="44160" e_length="156"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="44159" i_stop="44038" i_length="122"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44037" e_stop="43826" e_length="212"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.996">
            <gDNA_intron_boundary i_start="43825" i_stop="43726" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="43725" e_stop="43624" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.997">
            <gDNA_intron_boundary i_start="43623" i_stop="43297" i_length="327"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="43296" e_stop="43154" e_length="143"/>
          </exon>
          <intron i_serial="5" don_prob="0.929" acc_prob="0.998">
            <gDNA_intron_boundary i_start="43153" i_stop="42767" i_length="387"/>
          </intron>
          <exon e_serial="6" e_score="0.998">
            <gDNA_exon_boundary e_start="42766" e_stop="42054" e_length="713"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44557" stop="44407"/>
              <exon start="44315" stop="44160"/>
              <exon start="44037" stop="43826"/>
              <exon start="43725" stop="43709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43936" stop="43826"/>
              <exon start="43725" stop="43624"/>
              <exon start="43296" stop="43154"/>
              <exon start="42766" stop="42195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43257" stop="43154"/>
              <exon start="42766" stop="42150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43256" stop="43154"/>
              <exon start="42766" stop="42325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42567" stop="42054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTATACACCTGCTATTGATATCTGGAGCATCGGGTGCATTTTTGCGGAGGTTTTGACGGGGAAACCATTATTTCCGGGCAAAAGTGTTGTTCACCAGTTGGATTTGATTACTGATCTTCTGGGGACGCCATCAGTTGATATTGTATCTGGG : GTTCGTAATGAAAAGGCAAGGAAGTACTTGACAGATATGAAGAAAAAAAGCCCAGTTCCTTTTACTGAGAAATTTCGAAAAGCAGATCCTTTGGCACTTCGACTGTTGCAGAGGTTGTTAGCATTTGATCCAAAGGATCGCCCAACTGCTGAAGAG : GCTTTGGCTGATCCGTACTTCAAGGGACTGGCCAAGATTGAGAGGGAACCTTCTAGTCAACCAATCTCGAAGCTGGAGTTTGAGTTTGAGCGACGAAGGGTCACAAAGGATGACATTCGTGAACTAATATTTAGGGAGATACTTGAGTATCATCCTCAACTTCTGAAGGACTACATGGCTGGAAATAGTGGTGCAAATTTTATCTATCCTAG : TGCCATTGGTAATTTCAGAAGGCAATTTGCTTATCTAGAGGAGAATAGTGGTAAAAGTGGCCCAGTAATACCTCCTGGTCGAAAGCACGTCTCTCTCCCGCG : ATCTACTGTAAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAG : CCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTCCC</gDNA_template>
            <first_frame> V  Y  T  C  Y  *  Y  L  E  H  R  V  H  F  C  G  G  F  D  G  E  T  I  I  S  G  Q  K  C  C  S  P  V  G  F  D  Y  *  S  S  G  D  A  I  S  *  Y  C  I  W   : G  S  *  *  K  G  K  E  V  L  D  R  Y  E  E  K  K  P  S  S  F  Y  *  E  I  S  K  S  R  S  F  G  T  S  T  V  A  E  V  V  S  I  *  S  K  G  S  P  N  C  *  R   : G  F  G  *  S  V  L  Q  G  T  G  Q  D  *  E  G  T  F  *  S  T  N  L  E  A  G  V  *  V  *  A  T  K  G  H  K  G  *  H  S  *  T  N  I  *  G  D  T  *  V  S  S  S  T  S  E  G  L  H  G  W  K  *  W  C  K  F  Y  L  S  *  :  C  H  W  *  F  Q  K  A  I  C  L  S  R  G  E  *  W  *  K  W  P  S  N  T  S  W  S  K  A  R  L  S  P  A  :  I  Y  C  K  F  Q  Y  H  P  P  Q  N  T  A  E  S  Y  V  *  S  *  T  S  N  R  K  G  N  C  W  R  Q  S  L  R  P  E  G  F  A  T  T  T  S  S  T  H  S :   Q  T  W  K  S  F  R  T  S  I  *  W  *  Q  K  H  Q  R  S  H  *  W  K  S  I  C  P  E  L  C  R  P  T  S  W  H  V  S  T  I  S  V  Q  E  *  L  Y  T  S  R  E  V  W  D  R  S  R  E  G  P  L  S  S  *  T  A  T  W  P  V  H  G  C  Q  V  V  R  *  Y  E  F  *  D  E  H  *  P  I  L  P  Y  T  G  K  G  S  T  V  G  R  S  N  R  H  G  C  K  I  T  T  G  T  N  T  V  W  C  S  R  C  C  S  C  R  C  C  C  S  Q  R  G  R  H  R  S  V  W  S  I  T  *  S  I  L  L  F  D  G  S  L  N  Q  V  R  T  S  T  L  Q  *  D  S  S  R  Y  A  F  S  L  K  S  I  S  M  G  D  L  K  R  D  L  L  T  R  L  M  I  L  P  F  I  S  C  Q  G  L  *  I  G  I  L  *  V  Q  V  A  L  L  S  *  Y  L  C  P  L  V  H  I  Y  I  Y  R  R  D  A  L  I  D  I  M  K  K  K  Y  C  S  S  </first_frame>
            <second_frame>  Y  T  P  A  I  D  I  W  S  I  G  C  I  F  A  E  V  L  T  G  K  P  L  F  P  G  K  S  V  V  H  Q  L  D  L  I  T  D  L  L  G  T  P  S  V  D  I  V  S  G  :  V  R  N  E  K  A  R  K  Y  L  T  D  M  K  K  K  S  P  V  P  F  T  E  K  F  R  K  A  D  P  L  A  L  R  L  L  Q  R  L  L  A  F  D  P  K  D  R  P  T  A  E  E  :  A  L  A  D  P  Y  F  K  G  L  A  K  I  E  R  E  P  S  S  Q  P  I  S  K  L  E  F  E  F  E  R  R  R  V  T  K  D  D  I  R  E  L  I  F  R  E  I  L  E  Y  H  P  Q  L  L  K  D  Y  M  A  G  N  S  G  A  N  F  I  Y  P  S :   A  I  G  N  F  R  R  Q  F  A  Y  L  E  E  N  S  G  K  S  G  P  V  I  P  P  G  R  K  H  V  S  L  P  R :   S  T  V  N  S  S  T  I  P  P  R  T  Q  Q  N  P  M  F  D  H  R  Q  V  T  E  K  A  T  A  G  V  R  V  S  D  P  K  V  L  R  P  P  P  R  V  P  T   : A  K  P  G  R  V  L  G  P  V  Y  D  G  D  R  S  I  K  E  V  T  D  G  R  V  Y  A  Q  N  S  V  V  Q  P  H  G  M  S  P  Q  Y  L  F  R  S  N  S  T  H  L  E  K  C  G  T  E  A  E  K  D  R  S  Q  V  K  Q  Q  H  G  Q  C  M  V  A  K  S  S  A  S  M  S  F  E  M  N  T  N  P  Y  Y  H  T  Q  A  R  V  A  Q  L  G  G  Q  I  A  M  D  A  K  L  L  Q  A  Q  T  Q  F  G  A  V  G  A  A  A  V  A  V  A  A  H  R  E  V  G  T  V  Q  Y  G  L  *  P  S  R  Y  Y  C  L  M  V  L  *  I  K  *  G  H  P  P  C  S  E  T  V  H  D  M  H  F  P  S  N  Q  S  A  W  E  I  *  R  G  I  C  *  P  G  *  *  F  Y  H  L  L  V  V  R  V  S  K  *  V  F  F  R  F  R  L  P  C  *  V  S  I  Y  A  P  L  Y  I  Y  I  Y  I  G  A  M  H  *  L  I  *  *  R  K  N  I  V  L  P </second_frame>
            <third_frame>   I  H  L  L  L  I  S  G  A  S  G  A  F  L  R  R  F  *  R  G  N  H  Y  F  R  A  K  V  L  F  T  S  W  I  *  L  L  I  F  W  G  R  H  Q  L  I  L  Y  L  G :   F  V  M  K  R  Q  G  S  T  *  Q  I  *  R  K  K  A  Q  F  L  L  L  R  N  F  E  K  Q  I  L  W  H  F  D  C  C  R  G  C  *  H  L  I  Q  R  I  A  Q  L  L  K  R :   L  W  L  I  R  T  S  R  D  W  P  R  L  R  G  N  L  L  V  N  Q  S  R  S  W  S  L  S  L  S  D  E  G  S  Q  R  M  T  F  V  N  *  Y  L  G  R  Y  L  S  I  I  L  N  F  *  R  T  T  W  L  E  I  V  V  Q  I  L  S  I  L   : V  P  L  V  I  S  E  G  N  L  L  I  *  R  R  I  V  V  K  V  A  Q  *  Y  L  L  V  E  S  T  S  L  S  R   : D  L  L  *  I  P  V  P  S  P  P  E  H  S  R  I  L  C  L  I  I  D  K  *  Q  K  R  Q  L  L  A  S  E  S  Q  T  R  R  F  C  D  H  H  L  E  Y  P  Q  :  P  N  L  E  E  F  *  D  Q  Y  M  M  V  T  E  A  S  K  K  S  L  M  E  E  Y  M  P  R  T  L  S  S  N  L  M  A  C  L  H  N  I  C  S  G  V  T  L  H  I  *  R  S  V  G  Q  K  Q  R  R  T  A  L  K  L  N  S  N  M  A  S  A  W  L  P  S  R  P  L  V  *  V  L  R  *  T  L  T  H  I  T  I  H  R  Q  G  *  H  S  W  E  V  K  S  P  W  M  Q  N  Y  Y  R  H  K  H  S  L  V  Q  S  V  L  Q  L  S  L  L  L  L  T  E  R  S  A  P  F  S  M  V  Y  N  L  V  D  T  I  V  *  W  F  F  E  S  S  E  D  I  H  L  A  V  R  Q  F  T  I  C  I  F  P  Q  I  N  Q  H  G  R  F  E  E  G  S  V  N  P  V  N  D  F  T  I  Y  *  L  S  G  S  L  N  R  Y  S  L  G  S  G  C  P  V  E  L  V  F  M  P  P  C  T  Y  I  Y  I  *  A  R  C  I  N  *  Y  N  E  E  K  I  L  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44556" stop="44407"/>
                    <exon start="44315" stop="44160"/>
                    <exon start="44037" stop="43826"/>
                    <exon start="43725" stop="43624"/>
                    <exon start="43296" stop="43154"/>
                    <exon start="42766" stop="42348"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1179</number_coding_nucleotides>
                  <number_encoded_amino_acids>393</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSVDIVSGVRNEKARKYLTDMKKKSPVPFTEKFRKADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLAKIEREPSSQPISKLEFEFERRRVTKDDIRELIFREILEYHPQLLKDYMAGNSGANFIYPSAIGNFRRQFAYLEENSGKSGPVIPPGRKHVSLPRSTVNSSTIPPRTQQNPMFDHRQVTEKATAGVRVSDPKVLRPPPRVPTAKPGRVLGPVYDGDRSIKEVTDGRVYAQNSVVQPHGMSPQYLFRSNSTHLEKCGTEAEKDRSQVKQQHGQCMVAKSSASMSFEMNTNPYYHTQARVAQLGGQIAMDAKLLQAQTQFGAVGAAAVAVAAHREVGTVQYGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="43300" e_stop="43154"/>
            <exon e_start="42766" e_stop="42054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.998" e_score="0.986"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="43300" e_stop="43154" e_length="147"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.998">
            <gDNA_intron_boundary i_start="43153" i_stop="42767" i_length="387"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="42766" e_stop="42054" e_length="713"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43300" stop="43154"/>
              <exon start="42766" stop="42564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208695" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43257" stop="43154"/>
              <exon start="42766" stop="42150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43256" stop="43154"/>
              <exon start="42766" stop="42325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42567" stop="42054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGATCTACTGTAAATTCCAGTACCATCCCCCCCAGAACACAGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAACTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGAGTACCCACAG : CCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTCCC</gDNA_template>
            <first_frame> A  D  L  L  *  I  P  V  P  S  P  P  E  H  S  R  I  L  C  L  I  I  D  K  *  Q  K  R  Q  L  L  A  S  E  S  Q  T  R  R  F  C  D  H  H  L  E  Y  P  Q  :  P  N  L  E  E  F  *  D  Q  Y  M  M  V  T  E  A  S  K  K  S  L  M  E  E  Y  M  P  R  T  L  S  S  N  L  M  A  C  L  H  N  I  C  S  G  V  T  L  H  I  *  R  S  V  G  Q  K  Q  R  R  T  A  L  K  L  N  S  N  M  A  S  A  W  L  P  S  R  P  L  V  *  V  L  R  *  T  L  T  H  I  T  I  H  R  Q  G  *  H  S  W  E  V  K  S  P  W  M  Q  N  Y  Y  R  H  K  H  S  L  V  Q  S  V  L  Q  L  S  L  L  L  L  T  E  R  S  A  P  F  S  M  V  Y  N  L  V  D  T  I  V  *  W  F  F  E  S  S  E  D  I  H  L  A  V  R  Q  F  T  I  C  I  F  P  Q  I  N  Q  H  G  R  F  E  E  G  S  V  N  P  V  N  D  F  T  I  Y  *  L  S  G  S  L  N  R  Y  S  L  G  S  G  C  P  V  E  L  V  F  M  P  P  C  T  Y  I  Y  I  *  A  R  C  I  N  *  Y  N  E  E  K  I  L  F  F   </first_frame>
            <second_frame>  Q  I  Y  C  K  F  Q  Y  H  P  P  Q  N  T  A  E  S  Y  V  *  S  *  T  S  N  R  K  G  N  C  W  R  Q  S  L  R  P  E  G  F  A  T  T  T  S  S  T  H  S :   Q  T  W  K  S  F  R  T  S  I  *  W  *  Q  K  H  Q  R  S  H  *  W  K  S  I  C  P  E  L  C  R  P  T  S  W  H  V  S  T  I  S  V  Q  E  *  L  Y  T  S  R  E  V  W  D  R  S  R  E  G  P  L  S  S  *  T  A  T  W  P  V  H  G  C  Q  V  V  R  *  Y  E  F  *  D  E  H  *  P  I  L  P  Y  T  G  K  G  S  T  V  G  R  S  N  R  H  G  C  K  I  T  T  G  T  N  T  V  W  C  S  R  C  C  S  C  R  C  C  C  S  Q  R  G  R  H  R  S  V  W  S  I  T  *  S  I  L  L  F  D  G  S  L  N  Q  V  R  T  S  T  L  Q  *  D  S  S  R  Y  A  F  S  L  K  S  I  S  M  G  D  L  K  R  D  L  L  T  R  L  M  I  L  P  F  I  S  C  Q  G  L  *  I  G  I  L  *  V  Q  V  A  L  L  S  *  Y  L  C  P  L  V  H  I  Y  I  Y  R  R  D  A  L  I  D  I  M  K  K  K  Y  C  S  S  </second_frame>
            <third_frame>   R  S  T  V  N  S  S  T  I  P  P  R  T  Q  Q  N  P  M  F  D  H  R  Q  V  T  E  K  A  T  A  G  V  R  V  S  D  P  K  V  L  R  P  P  P  R  V  P  T   : A  K  P  G  R  V  L  G  P  V  Y  D  G  D  R  S  I  K  E  V  T  D  G  R  V  Y  A  Q  N  S  V  V  Q  P  H  G  M  S  P  Q  Y  L  F  R  S  N  S  T  H  L  E  K  C  G  T  E  A  E  K  D  R  S  Q  V  K  Q  Q  H  G  Q  C  M  V  A  K  S  S  A  S  M  S  F  E  M  N  T  N  P  Y  Y  H  T  Q  A  R  V  A  Q  L  G  G  Q  I  A  M  D  A  K  L  L  Q  A  Q  T  Q  F  G  A  V  G  A  A  A  V  A  V  A  A  H  R  E  V  G  T  V  Q  Y  G  L  *  P  S  R  Y  Y  C  L  M  V  L  *  I  K  *  G  H  P  P  C  S  E  T  V  H  D  M  H  F  P  S  N  Q  S  A  W  E  I  *  R  G  I  C  *  P  G  *  *  F  Y  H  L  L  V  V  R  V  S  K  *  V  F  F  R  F  R  L  P  C  *  V  S  I  Y  A  P  L  Y  I  Y  I  Y  I  G  A  M  H  *  L  I  *  *  R  K  N  I  V  L  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43298" stop="43154"/>
                    <exon start="42766" stop="42348"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSTVNSSTIPPRTQQNPMFDHRQVTEKATAGVRVSDPKVLRPPPRVPTAKPGRVLGPVYDGDRSIKEVTDGRVYAQNSVVQPHGMSPQYLFRSNSTHLEKCGTEAEKDRSQVKQQHGQCMVAKSSASMSFEMNTNPYYHTQARVAQLGGQIAMDAKLLQAQTQFGAVGAAAVAVAAHREVGTVQYGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="42767" e_stop="42056"/>
            <exon e_start="41776" e_stop="41760"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.827" e_score="0.996"/>
          <exon-only e_score="0.706"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="42767" e_stop="42056" e_length="712"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.827">
            <gDNA_intron_boundary i_start="42055" i_stop="41777" i_length="279"/>
          </intron>
          <exon e_serial="2" e_score="0.706">
            <gDNA_exon_boundary e_start="41776" e_stop="41760" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42767" stop="42056"/>
              <exon start="41776" stop="41760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544984" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAACTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACCGCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACACAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTGTCGCTGTTGCTGCTCACAGAGAGGTCGGCACCGTTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGATGGTTCTTTGAATCAAGTGAGGACATCCACCTTGCAGTGAGACAGTTCACGATATGCATTTTCCCTCAAATCAATCAGCATGGGAGATTTGAAGAGGGATCTGTTAACCCGGTTAATGATTTTACCATTTATTAGTTGTCAGGGTCTCTAAATAGGTATTCTTTAGGTTCAGGTTGCCCTGTTGAGTTAGTATTTATGCCCCCTTGTACATATATATATATATAGGCGCGATGCATTAATTGATATAATGAAGAAAAAATATTGTTCTTC : CGAGAAATATACAAAAA</gDNA_template>
            <first_frame> A  K  P  G  R  V  L  G  P  V  Y  D  G  D  R  S  I  K  E  V  T  D  G  R  V  Y  A  Q  N  S  V  V  Q  P  H  G  M  S  P  Q  Y  L  F  R  S  N  S  T  H  L  E  K  C  G  T  E  A  E  K  D  R  S  Q  V  K  Q  Q  H  G  Q  C  M  V  A  K  S  S  A  S  M  S  F  E  M  N  T  N  P  Y  Y  H  T  Q  A  R  V  A  Q  L  G  G  Q  I  A  M  D  A  K  L  L  Q  A  Q  T  Q  F  G  A  V  G  A  A  A  V  A  V  A  A  H  R  E  V  G  T  V  Q  Y  G  L  *  P  S  R  Y  Y  C  L  M  V  L  *  I  K  *  G  H  P  P  C  S  E  T  V  H  D  M  H  F  P  S  N  Q  S  A  W  E  I  *  R  G  I  C  *  P  G  *  *  F  Y  H  L  L  V  V  R  V  S  K  *  V  F  F  R  F  R  L  P  C  *  V  S  I  Y  A  P  L  Y  I  Y  I  Y  I  G  A  M  H  *  L  I  *  *  R  K  N  I  V  L   : P  R  N  I  Q  K </first_frame>
            <second_frame>  P  N  L  E  E  F  *  D  Q  Y  M  M  V  T  E  A  S  K  K  S  L  M  E  E  Y  M  P  R  T  L  S  S  N  L  M  A  C  L  H  N  I  C  S  G  V  T  L  H  I  *  R  S  V  G  Q  K  Q  R  R  T  A  L  K  L  N  S  N  M  A  S  A  W  L  P  S  R  P  L  V  *  V  L  R  *  T  L  T  H  I  T  I  H  R  Q  G  *  H  S  W  E  V  K  S  P  W  M  Q  N  Y  Y  R  H  K  H  S  L  V  Q  S  V  L  Q  L  S  L  L  L  L  T  E  R  S  A  P  F  S  M  V  Y  N  L  V  D  T  I  V  *  W  F  F  E  S  S  E  D  I  H  L  A  V  R  Q  F  T  I  C  I  F  P  Q  I  N  Q  H  G  R  F  E  E  G  S  V  N  P  V  N  D  F  T  I  Y  *  L  S  G  S  L  N  R  Y  S  L  G  S  G  C  P  V  E  L  V  F  M  P  P  C  T  Y  I  Y  I  *  A  R  C  I  N  *  Y  N  E  E  K  I  L  F  F  :  R  E  I  Y  K   </second_frame>
            <third_frame>   Q  T  W  K  S  F  R  T  S  I  *  W  *  Q  K  H  Q  R  S  H  *  W  K  S  I  C  P  E  L  C  R  P  T  S  W  H  V  S  T  I  S  V  Q  E  *  L  Y  T  S  R  E  V  W  D  R  S  R  E  G  P  L  S  S  *  T  A  T  W  P  V  H  G  C  Q  V  V  R  *  Y  E  F  *  D  E  H  *  P  I  L  P  Y  T  G  K  G  S  T  V  G  R  S  N  R  H  G  C  K  I  T  T  G  T  N  T  V  W  C  S  R  C  C  S  C  R  C  C  C  S  Q  R  G  R  H  R  S  V  W  S  I  T  *  S  I  L  L  F  D  G  S  L  N  Q  V  R  T  S  T  L  Q  *  D  S  S  R  Y  A  F  S  L  K  S  I  S  M  G  D  L  K  R  D  L  L  T  R  L  M  I  L  P  F  I  S  C  Q  G  L  *  I  G  I  L  *  V  Q  V  A  L  L  S  *  Y  L  C  P  L  V  H  I  Y  I  Y  R  R  D  A  L  I  D  I  M  K  K  K  Y  C  S  S :   E  K  Y  T  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42767" stop="42348"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKPGRVLGPVYDGDRSIKEVTDGRVYAQNSVVQPHGMSPQYLFRSNSTHLEKCGTEAEKDRSQVKQQHGQCMVAKSSASMSFEMNTNPYYHTQARVAQLGGQIAMDAKLLQAQTQFGAVGAAAVAVAAHREVGTVQYGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="47581" PGL_stop="46038"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47581" e_stop="47154"/>
            <exon e_start="46152" e_stop="46038"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.919" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47581" e_stop="47154" e_length="428"/>
          </exon>
          <intron i_serial="1" don_prob="0.919" acc_prob="0.981">
            <gDNA_intron_boundary i_start="47153" i_stop="46153" i_length="1001"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46152" e_stop="46038" e_length="115"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47581" stop="47154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331094" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47564" stop="47154"/>
              <exon start="46152" stop="46038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286338" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAATTGGCCTCCTTGTTGCTCTCTCTCTCTTCTCCATCTTTCAAAACCCGAAAAAGGGTTACTTCTTTCTACACCCTTCGTTCATTTTCTGTTCATTTTTTTGTAGGATTTTAGGCTCAACTGATACTAATTTTGTGTATAAAAATCATACTGTTTTCTTCAAAAGTGGGGTTCGCTCTTTGTTAGTACGTTTCAATACGTTGTTGACGTCGGTGGGGCGAAGTGCTCTGCTGATTCTCTGATTTATTCCATTTGGGGTTGTTCAGATTTGTTTTATTTTTGGATATTTTTGATCTGATCTTCTGTATAAGATCAGGGGAACCTAGAGAAGAAAAGGGTACCTTCAGATATCCTCTTTTTTTGAATTTATTCGTTACCCAGATTGTTTAAAGTCTTCAAAAGATGCAGCAAGATCAGCGCAAGAAG : AGTTCCAAAGAAGTGGAGTTCTTCACCGAGTACGGTGATGCTAATAGGTATAAAATTTTGGAAGTTATAGGCAAGGGAAGTTATGGAGTAGTTTGTGCTGCAATTGACACTCATA</gDNA_template>
            <first_frame> F  N  W  P  P  C  C  S  L  S  L  L  H  L  S  K  P  E  K  G  L  L  L  S  T  P  F  V  H  F  L  F  I  F  L  *  D  F  R  L  N  *  Y  *  F  C  V  *  K  S  Y  C  F  L  Q  K  W  G  S  L  F  V  S  T  F  Q  Y  V  V  D  V  G  G  A  K  C  S  A  D  S  L  I  Y  S  I  W  G  C  S  D  L  F  Y  F  W  I  F  L  I  *  S  S  V  *  D  Q  G  N  L  E  K  K  R  V  P  S  D  I  L  F  F  *  I  Y  S  L  P  R  L  F  K  V  F  K  R  C  S  K  I  S  A  R  R :   V  P  K  K  W  S  S  S  P  S  T  V  M  L  I  G  I  K  F  W  K  L  *  A  R  E  V  M  E  *  F  V  L  Q  L  T  L  I </first_frame>
            <second_frame>  S  I  G  L  L  V  A  L  S  L  F  S  I  F  Q  N  P  K  K  G  Y  F  F  L  H  P  S  F  I  F  C  S  F  F  C  R  I  L  G  S  T  D  T  N  F  V  Y  K  N  H  T  V  F  F  K  S  G  V  R  S  L  L  V  R  F  N  T  L  L  T  S  V  G  R  S  A  L  L  I  L  *  F  I  P  F  G  V  V  Q  I  C  F  I  F  G  Y  F  *  S  D  L  L  Y  K  I  R  G  T  *  R  R  K  G  Y  L  Q  I  S  S  F  F  E  F  I  R  Y  P  D  C  L  K  S  S  K  D  A  A  R  S  A  Q  E   : E  F  Q  R  S  G  V  L  H  R  V  R  *  C  *  *  V  *  N  F  G  S  Y  R  Q  G  K  L  W  S  S  L  C  C  N  *  H  S   </second_frame>
            <third_frame>   Q  L  A  S  L  L  L  S  L  S  S  P  S  F  K  T  R  K  R  V  T  S  F  Y  T  L  R  S  F  S  V  H  F  F  V  G  F  *  A  Q  L  I  L  I  L  C  I  K  I  I  L  F  S  S  K  V  G  F  A  L  C  *  Y  V  S  I  R  C  *  R  R  W  G  E  V  L  C  *  F  S  D  L  F  H  L  G  L  F  R  F  V  L  F  L  D  I  F  D  L  I  F  C  I  R  S  G  E  P  R  E  E  K  G  T  F  R  Y  P  L  F  L  N  L  F  V  T  Q  I  V  *  S  L  Q  K  M  Q  Q  D  Q  R  K  K  :  S  S  K  E  V  E  F  F  T  E  Y  G  D  A  N  R  Y  K  I  L  E  V  I  G  K  G  S  Y  G  V  V  C  A  A  I  D  T  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47580" stop="47338"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIGLLVALSLFSIFQNPKKGYFFLHPSFIFCSFFCRILGSTDTNFVYKNHTVFFKSGVRSLLVRFNTLLTSVGRSALLIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="53163" PGL_stop="53788"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53163" e_stop="53788"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="53163" e_stop="53788" e_length="626"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53163" stop="53788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354941" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAGGTTAGGTATAGAATTTTGGGTGTAATTATTAAGTTTTTGGTAACCAAAAAGTGTATGGATATAGATAGTTTGAATTTAAACTATCTGCACCTAATGTTGTAAAGGTCGTAATATTTACCAGCATCAGATATTTACAACAAATCAATAGATACATGACTATTACTTAACCATGATCAGTTAACATATATATATTTTCACTTCATGAAATCAAACTCGAAAATGACAATACAAAAAAACAAAGCACAAGAATACTAGCAAAACTAATAAGTAAATCTGTCAGAAACATGAGGCTCATATCATTCAAGTTTTTCAAAGCTGGCAATTTTTCCAGCAACAATCAGTAGCGATCCATCGTTAACGAAAATACTGTGCATCTGCTGCTTCATTAGTTTCCTGGCACACAGGACTAGCTATGCTAACCAACTTCCTGGAGTTAGTTATCAGCTGAGATGACAGAAGCACAAGAAAAAATAATTTATCGAAAACTATGCTACACCAGAAGTTCTTCGGGAAAAAGAGAGAGCTAGAGTAAGTAATCATTTCAGAGCTGTATCTTCAATCCCAAATTTAACAAGCGGATAGCATCATCAGCAAAATATGCAGATTAGTGCTACTTCCCGA</gDNA_template>
            <first_frame> F  R  L  G  I  E  F  W  V  *  L  L  S  F  W  *  P  K  S  V  W  I  *  I  V  *  I  *  T  I  C  T  *  C  C  K  G  R  N  I  Y  Q  H  Q  I  F  T  T  N  Q  *  I  H  D  Y  Y  L  T  M  I  S  *  H  I  Y  I  F  T  S  *  N  Q  T  R  K  *  Q  Y  K  K  T  K  H  K  N  T  S  K  T  N  K  *  I  C  Q  K  H  E  A  H  I  I  Q  V  F  Q  S  W  Q  F  F  Q  Q  Q  S  V  A  I  H  R  *  R  K  Y  C  A  S  A  A  S  L  V  S  W  H  T  G  L  A  M  L  T  N  F  L  E  L  V  I  S  *  D  D  R  S  T  R  K  N  N  L  S  K  T  M  L  H  Q  K  F  F  G  K  K  R  E  L  E  *  V  I  I  S  E  L  Y  L  Q  S  Q  I  *  Q  A  D  S  I  I  S  K  I  C  R  L  V  L  L  P   </first_frame>
            <second_frame>  L  G  *  V  *  N  F  G  C  N  Y  *  V  F  G  N  Q  K  V  Y  G  Y  R  *  F  E  F  K  L  S  A  P  N  V  V  K  V  V  I  F  T  S  I  R  Y  L  Q  Q  I  N  R  Y  M  T  I  T  *  P  *  S  V  N  I  Y  I  F  S  L  H  E  I  K  L  E  N  D  N  T  K  K  Q  S  T  R  I  L  A  K  L  I  S  K  S  V  R  N  M  R  L  I  S  F  K  F  F  K  A  G  N  F  S  S  N  N  Q  *  R  S  I  V  N  E  N  T  V  H  L  L  L  H  *  F  P  G  T  Q  D  *  L  C  *  P  T  S  W  S  *  L  S  A  E  M  T  E  A  Q  E  K  I  I  Y  R  K  L  C  Y  T  R  S  S  S  G  K  R  E  S  *  S  K  *  S  F  Q  S  C  I  F  N  P  K  F  N  K  R  I  A  S  S  A  K  Y  A  D  *  C  Y  F  P  </second_frame>
            <third_frame>   *  V  R  Y  R  I  L  G  V  I  I  K  F  L  V  T  K  K  C  M  D  I  D  S  L  N  L  N  Y  L  H  L  M  L  *  R  S  *  Y  L  P  A  S  D  I  Y  N  K  S  I  D  T  *  L  L  L  N  H  D  Q  L  T  Y  I  Y  F  H  F  M  K  S  N  S  K  M  T  I  Q  K  N  K  A  Q  E  Y  *  Q  N  *  *  V  N  L  S  E  T  *  G  S  Y  H  S  S  F  S  K  L  A  I  F  P  A  T  I  S  S  D  P  S  L  T  K  I  L  C  I  C  C  F  I  S  F  L  A  H  R  T  S  Y  A  N  Q  L  P  G  V  S  Y  Q  L  R  *  Q  K  H  K  K  K  *  F  I  E  N  Y  A  T  P  E  V  L  R  E  K  E  R  A  R  V  S  N  H  F  R  A  V  S  S  I  P  N  L  T  S  G  *  H  H  Q  Q  N  M  Q  I  S  A  T  S  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0102J11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="57863" PGL_stop="53575"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57863" e_stop="57170"/>
            <exon e_start="55800" e_stop="55615"/>
            <exon e_start="55143" e_stop="54948"/>
            <exon e_start="54704" e_stop="54567"/>
            <exon e_start="53960" e_stop="53911"/>
            <exon e_start="53813" e_stop="53575"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="1.000" e_score="0.960"/>
          <exon-intron don_prob="0.990" acc_prob="0.992" e_score="0.988"/>
          <exon-intron don_prob="0.720" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.873" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.678" e_score="0.980"/>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="57863" e_stop="57170" e_length="694"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="1.000">
            <gDNA_intron_boundary i_start="57169" i_stop="55801" i_length="1369"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="55800" e_stop="55615" e_length="186"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.992">
            <gDNA_intron_boundary i_start="55614" i_stop="55144" i_length="471"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55143" e_stop="54948" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="0.720" acc_prob="0.951">
            <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54704" e_stop="54567" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.961" acc_prob="0.873">
            <gDNA_intron_boundary i_start="54566" i_stop="53961" i_length="606"/>
          </intron>
          <exon e_serial="5" e_score="0.980">
            <gDNA_exon_boundary e_start="53960" e_stop="53911" e_length="50"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.678">
            <gDNA_intron_boundary i_start="53910" i_stop="53814" i_length="97"/>
          </intron>
          <exon e_serial="6" e_score="0.900">
            <gDNA_exon_boundary e_start="53813" e_stop="53575" e_length="239"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57863" stop="57170"/>
              <exon start="55800" stop="55736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57830" stop="57253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57821" stop="57174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57812" stop="57170"/>
              <exon start="55800" stop="55736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57812" stop="57311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57596" stop="57170"/>
              <exon start="55800" stop="55756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55774" stop="55615"/>
              <exon start="55143" stop="54948"/>
              <exon start="54704" stop="54591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324366" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55731" stop="55615"/>
              <exon start="55143" stop="54948"/>
              <exon start="54704" stop="54567"/>
              <exon start="53960" stop="53911"/>
              <exon start="53813" stop="53575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55024" stop="54948"/>
              <exon start="54704" stop="54567"/>
              <exon start="53960" stop="53911"/>
              <exon start="53813" stop="53607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248236" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATTTTGAAGAAGAAAAGAGGGATACTGTAGAAAACATGAAAGGTCTAGCAACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAAAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAG : GCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGAGCAGACTCTCCAATCCCTCTAGAACTTCTTCGTTGTGTTGAGATTTTCAGCCCGAATGAAACTGAGCTGGCTAGAATAACAAAAATGCCAACTGGAAATTTCGAACAAATCAGCAATGCAGTGGAACAGTGCTATGACATG : GGAGTTAACCAGGTCCTTGTTAAGCTTGGGGCCAATGGATCTGCTCTTTTCACCAAAGGAGAGGAACCCTTGCGGCAACCCATTATTAAAGCTGCAAAAGTCATTGATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG : CTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAG : GTTCTCAGGTTGATGAGTTGAAGTTCCGGAGTCTTGATTTTCATGAAGAG : GACTGCCGTGGAGCACTTGTTAACTTCGGGAAGTAGCACTAATCTGCATATTTTGCTGATGATGCTATCCGCTTGTTAAATTTGGGATTGAAGATACAGCTCTGAAATGATTACTTACTCTAGCTCTCTCTTTTTCCCGAAGAACTTCTGGTGTAGCATAGTTTTCGATAAATTATTTTTTCTTGTGCTTCTGTCATCTCAGCTGATAACTAACTCCAGGAAGTTGGTTAGCATAGCTA</gDNA_template>
            <first_frame> K  F  *  R  R  K  E  G  Y  C  R  K  H  E  R  S  S  N  T  F  T  I  K  I  L  A  P  N  S  P  K  Q  P  Q  K  P  R  K  F  Q  S  L  Q  S  P  S  S  I  *  W  Q  K  Q  Q  P  H  I  K  K  S  E  T  H  L  L  F  C  F  R  E  P  K  S  A  N  L  E  R  I  K  A  S  I  G  C  S  W  I  S  *  C  R  Y  L  C  G  D  *  *  V  T  K  R  R  G  N  N  F  S  *  N  R  S  N  I  G  W  W  K  G  G  *  S  S  C  L  W  W  K  A  *  L  S  N  F  F  Y  W  S  S  W  *  R  C  S  W  E  I  D  Y  *  S  F  R  E  W  W  G  L  C  G  S  P  Y  Y  C  C  *  C  S  N  W  K  C  C  G  D  A  S  V  *  W  G  E  F  N  Y  Y  C  W  W  C  K  H  V  L  L  A  *  R  I  V  I  *  G  F  G  D  C  E  K  C  R  D  C  V  A  P  K  G  N  S  R  F  C  *  H  P  S  C  K   : G  C  Q  E  C  R  C  S  S  Y  S  R  C  W  W  S  R  L  S  N  P  S  R  T  S  S  L  C  *  D  F  Q  P  E  *  N  *  A  G  *  N  N  K  N  A  N  W  K  F  R  T  N  Q  Q  C  S  G  T  V  L  *  H   : G  S  *  P  G  P  C  *  A  W  G  Q  W  I  C  S  F  H  Q  R  R  G  T  L  A  A  T  H  Y  *  S  C  K  S  H  *  Y  N  R  S  W  *  H  F  Y  S  C  F  C  S  G  P  S  G  G  *  I  *  R  G  M  F  E  I  C  C :   C  S  R  F  S  M  C  S  S  E  R  S  H  S  K  H  A  *  K  E  S  S  V  Q  S  S  S  V  S  L  K  T  W  S  F  L  Y  H  L  L  V  Q  K  N  K  R :   F  S  G  *  *  V  E  V  P  E  S  *  F  S  *  R   : G  L  P  W  S  T  C  *  L  R  E  V  A  L  I  C  I  F  C  *  *  C  Y  P  L  V  K  F  G  I  E  D  T  A  L  K  *  L  L  T  L  A  L  S  F  S  R  R  T  S  G  V  A  *  F  S  I  N  Y  F  F  L  C  F  C  H  L  S  *  *  L  T  P  G  S  W  L  A  *  L </first_frame>
            <second_frame>  N  F  E  E  E  K  R  D  T  V  E  N  M  K  G  L  A  T  P  L  Q  S  K  Y  W  H  P  T  A  Q  N  N  L  K  N  P  E  S  F  N  L  Y  S  H  P  V  Q  F  N  G  K  N  N  N  P  I  S  R  K  V  K  P  I  S  C  F  A  S  E  N  Q  N  Q  P  I  L  K  E  S  K  P  P  L  V  V  V  G  S  A  N  A  D  I  Y  V  E  I  D  R  L  P  K  E  G  E  T  I  S  A  K  T  G  Q  T  L  A  G  G  K  G  A  N  Q  A  V  C  G  G  K  L  D  Y  P  T  F  F  I  G  Q  V  G  E  D  A  H  G  R  L  I  T  E  A  L  E  S  G  G  V  C  V  D  H  L  T  T  V  A  N  A  P  T  G  N  A  V  V  M  L  Q  S  D  G  E  N  S  I  I  I  V  G  G  A  N  M  S  C  W  P  E  E  L  S  Y  E  D  L  E  I  V  R  S  A  G  I  V  L  L  Q  R  E  I  P  D  F  V  N  I  Q  V  A  K  :  A  A  R  N  A  G  V  P  V  I  L  D  A  G  G  A  D  S  P  I  P  L  E  L  L  R  C  V  E  I  F  S  P  N  E  T  E  L  A  R  I  T  K  M  P  T  G  N  F  E  Q  I  S  N  A  V  E  Q  C  Y  D  M  :  G  V  N  Q  V  L  V  K  L  G  A  N  G  S  A  L  F  T  K  G  E  E  P  L  R  Q  P  I  I  K  A  A  K  V  I  D  T  T  G  A  G  D  T  F  T  A  A  F  A  V  A  L  V  E  G  K  S  K  E  E  C  L  R  F  A   : A  A  A  A  S  L  C  V  Q  V  K  G  A  I  P  S  M  P  E  K  R  A  V  F  N  L  L  Q  S  A  *  R  L  G  V  S  F  I  I  S  L  Y  K  K  I  R   : G  S  Q  V  D  E  L  K  F  R  S  L  D  F  H  E  E  :  D  C  R  G  A  L  V  N  F  G  K  *  H  *  S  A  Y  F  A  D  D  A  I  R  L  L  N  L  G  L  K  I  Q  L  *  N  D  Y  L  L  *  L  S  L  F  P  E  E  L  L  V  *  H  S  F  R  *  I  I  F  S  C  A  S  V  I  S  A  D  N  *  L  Q  E  V  G  *  H  S   </second_frame>
            <third_frame>   I  L  K  K  K  R  G  I  L  *  K  T  *  K  V  *  Q  H  L  Y  N  Q  N  T  G  T  Q  Q  P  K  T  T  S  K  T  Q  K  V  S  I  F  T  V  T  Q  F  N  L  M  A  K  T  T  T  P  Y  Q  E  K  *  N  P  S  L  V  L  L  Q  R  T  K  I  S  Q  S  *  K  N  Q  S  L  H  W  L  *  L  D  Q  L  M  Q  I  S  M  W  R  L  I  G  Y  Q  K  K  G  K  Q  F  Q  L  K  Q  V  K  H  W  L  V  E  R  G  L  I  K  L  F  V  V  E  S  L  I  I  Q  L  F  L  L  V  K  L  V  K  M  L  M  G  D  *  L  L  K  L  *  R  V  V  G  F  V  W  I  T  L  L  L  L  L  M  L  Q  L  E  M  L  W  *  C  F  S  L  M  G  R  I  Q  L  L  L  L  V  V  Q  T  C  L  A  G  L  K  N  C  H  M  R  I  W  R  L  *  E  V  Q  G  L  C  C  S  K  G  K  F  Q  I  L  L  T  S  K  L  Q  R :   L  P  G  M  Q  V  F  Q  L  F  *  M  L  V  E  Q  T  L  Q  S  L  *  N  F  F  V  V  L  R  F  S  A  R  M  K  L  S  W  L  E  *  Q  K  C  Q  L  E  I  S  N  K  S  A  M  Q  W  N  S  A  M  T  W :   E  L  T  R  S  L  L  S  L  G  P  M  D  L  L  F  S  P  K  E  R  N  P  C  G  N  P  L  L  K  L  Q  K  S  L  I  Q  Q  E  L  V  T  L  L  Q  L  L  L  Q  W  P  *  W  R  V  N  L  K  R  N  V  *  D  L  L  :  L  Q  P  L  L  Y  V  F  K  *  K  E  P  F  Q  A  C  L  K  R  E  Q  C  S  I  F  F  S  Q  L  E  D  L  E  F  P  L  S  S  P  C  T  K  K  *  E  :  V  L  R  L  M  S  *  S  S  G  V  L  I  F  M  K  R :   T  A  V  E  H  L  L  T  S  G  S  S  T  N  L  H  I  L  L  M  M  L  S  A  C  *  I  W  D  *  R  Y  S  S  E  M  I  T  Y  S  S  S  L  F  F  P  K  N  F  W  C  S  I  V  F  D  K  L  F  F  L  V  L  L  S  S  Q  L  I  T  N  S  R  K  L  V  S  I  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57862" stop="57170"/>
                    <exon start="55800" stop="55615"/>
                    <exon start="55143" stop="54948"/>
                    <exon start="54704" stop="54613"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFEEEKRDTVENMKGLATPLQSKYWHPTAQNNLKNPESFNLYSHPVQFNGKNNNPISRKVKPISCFASENQNQPILKESKPPLVVVGSANADIYVEIDRLPKEGETISAKTGQTLAGGKGANQAVCGGKLDYPTFFIGQVGEDAHGRLITEALESGGVCVDHLTTVANAPTGNAVVMLQSDGENSIIIVGGANMSCWPEELSYEDLEIVRSAGIVLLQREIPDFVNIQVAKAARNAGVPVILDAGGADSPIPLELLRCVEIFSPNETELARITKMPTGNFEQISNAVEQCYDMGVNQVLVKLGANGSALFTKGEEPLRQPIIKAAKVIDTTGAGDTFTAAFAVALVEGKSKEECLRFAAAAASLCVQVKGAIPSMPEKRAVFNLLQSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="57863" e_stop="57170"/>
            <exon e_start="55800" e_stop="55615"/>
            <exon e_start="55143" e_stop="54948"/>
            <exon e_start="54704" e_stop="54282"/>
            <exon e_start="54231" e_stop="54053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="1.000" e_score="0.960"/>
          <exon-intron don_prob="0.990" acc_prob="0.992" e_score="0.988"/>
          <exon-intron don_prob="0.720" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.865"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="57863" e_stop="57170" e_length="694"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="1.000">
            <gDNA_intron_boundary i_start="57169" i_stop="55801" i_length="1369"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="55800" e_stop="55615" e_length="186"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.992">
            <gDNA_intron_boundary i_start="55614" i_stop="55144" i_length="471"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55143" e_stop="54948" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="0.720" acc_prob="0.951">
            <gDNA_intron_boundary i_start="54947" i_stop="54705" i_length="243"/>
          </intron>
          <exon e_serial="4" e_score="0.865">
            <gDNA_exon_boundary e_start="54704" e_stop="54282" e_length="423"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="54281" i_stop="54232" i_length="50"/>
          </intron>
          <exon e_serial="5" e_score="0.939">
            <gDNA_exon_boundary e_start="54231" e_stop="54053" e_length="179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57863" stop="57170"/>
              <exon start="55800" stop="55736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57830" stop="57253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57821" stop="57174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57812" stop="57170"/>
              <exon start="55800" stop="55736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57812" stop="57311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57596" stop="57170"/>
              <exon start="55800" stop="55756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55774" stop="55615"/>
              <exon start="55143" stop="54948"/>
              <exon start="54704" stop="54591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324366" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55038" stop="54948"/>
              <exon start="54704" stop="54282"/>
              <exon start="54231" stop="54053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55038" stop="54948"/>
              <exon start="54704" stop="54372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55038" stop="54948"/>
              <exon start="54704" stop="54372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472337" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATTTTGAAGAAGAAAAGAGGGATACTGTAGAAAACATGAAAGGTCTAGCAACACCTTTACAATCAAAATACTGGCACCCAACAGCCCAAAACAACCTCAAAAACCCAGAAAGTTTCAATCTTTACAGTCACCCAGTTCAATTTAATGGCAAAAACAACAACCCCATATCAAGAAAAGTGAAACCCATCTCTTGTTTTGCTTCAGAGAACCAAAATCAGCCAATCTTGAAAGAATCAAAGCCTCCATTGGTTGTAGTTGGATCAGCTAATGCAGATATCTATGTGGAGATTGATAGGTTACCAAAAGAAGGGGAAACAATTTCAGCTAAAACAGGTCAAACATTGGCTGGTGGAAAGGGGGCTAATCAAGCTGTTTGTGGTGGAAAGCTTGATTATCCAACTTTTTTTATTGGTCAAGTTGGTGAAGATGCTCATGGGAGATTGATTACTGAAGCTTTAGAGAGTGGTGGGGTTTGTGTGGATCACCTTACTACTGTTGCTAATGCTCCAACTGGAAATGCTGTGGTGATGCTTCAGTCTGATGGGGAGAATTCAATTATTATTGTTGGTGGTGCAAACATGTCTTGCTGGCCTGAAGAATTGTCATATGAGGATTTGGAGATTGTGAGAAGTGCAGGGATTGTGTTGCTCCAAAGGGAAATTCCAGATTTTGTTAACATCCAAGTTGCAAAG : GCTGCCAGGAATGCAGGTGTTCCAGTTATTCTAGATGCTGGTGGAGCAGACTCTCCAATCCCTCTAGAACTTCTTCGTTGTGTTGAGATTTTCAGCCCGAATGAAACTGAGCTGGCTAGAATAACAAAAATGCCAACTGGAAATTTCGAACAAATCAGCAATGCAGTGGAACAGTGCTATGACATG : GGAGTTAACCAGGTCCTTGTTAAGCTTGGGGCCAATGGATCTGCTCTTTTCACCAAAGGAGAGGAACCCTTGCGGCAACCCATTATTAAAGCTGCAAAAGTCATTGATACAACAGGAGCTGGTGACACTTTTACAGCTGCTTTTGCAGTGGCCCTAGTGGAGGGTAAATCTAAAGAGGAATGTTTGAGATTTGCTG : CTGCAGCCGCTTCTCTATGTGTTCAAGTGAAAGGAGCCATTCCAAGCATGCCTGAAAAGAGAGCAGTGTTCAATCTTCTTCAGTCAGCTTGAAGACTTGGAGTTTCCTTTATCATCTCCTTGTACAAAAAAATAAGAGGTACTGTTCTAAATATTCAGAACTTCGGATTATATTAGTTGGTGCTTTACCTTAATCATAGGAGGAAAAAAAAACTGTTCAAAAGGACAGTCTCCTACGAAAAAGGGAACGAGAGTGGACTCAAGGGTATCTAGATGAAGTTCCAGTTGACAATTACTCCCTTCATTTCAATTTGTTTGTCTTACATTCCTTTTCTAATCCGTATCAAGAAAAAATGTCTTCTTTTTTTTGCAACTCTTTGATTCCAACTTCCCACATAACATGTTTAAGACCATAAGATTAAAG : GAATACATAATAAGATAATGTTGTCTTCACAATCTCGGCATATACATAGGTTTCCCAAATATTTTGAAACCAAAAATTAGAATGTAGATGAAAGATGAACAACAAACCAAATCTGACTTTGTTATAAACTGTGATAGTAATGAAATTTGAATGTCCCTCTTCCCTCAAATATGCCTCTG</gDNA_template>
            <first_frame> K  F  *  R  R  K  E  G  Y  C  R  K  H  E  R  S  S  N  T  F  T  I  K  I  L  A  P  N  S  P  K  Q  P  Q  K  P  R  K  F  Q  S  L  Q  S  P  S  S  I  *  W  Q  K  Q  Q  P  H  I  K  K  S  E  T  H  L  L  F  C  F  R  E  P  K  S  A  N  L  E  R  I  K  A  S  I  G  C  S  W  I  S  *  C  R  Y  L  C  G  D  *  *  V  T  K  R  R  G  N  N  F  S  *  N  R  S  N  I  G  W  W  K  G  G  *  S  S  C  L  W  W  K  A  *  L  S  N  F  F  Y  W  S  S  W  *  R  C  S  W  E  I  D  Y  *  S  F  R  E  W  W  G  L  C  G  S  P  Y  Y  C  C  *  C  S  N  W  K  C  C  G  D  A  S  V  *  W  G  E  F  N  Y  Y  C  W  W  C  K  H  V  L  L  A  *  R  I  V  I  *  G  F  G  D  C  E  K  C  R  D  C  V  A  P  K  G  N  S  R  F  C  *  H  P  S  C  K   : G  C  Q  E  C  R  C  S  S  Y  S  R  C  W  W  S  R  L  S  N  P  S  R  T  S  S  L  C  *  D  F  Q  P  E  *  N  *  A  G  *  N  N  K  N  A  N  W  K  F  R  T  N  Q  Q  C  S  G  T  V  L  *  H   : G  S  *  P  G  P  C  *  A  W  G  Q  W  I  C  S  F  H  Q  R  R  G  T  L  A  A  T  H  Y  *  S  C  K  S  H  *  Y  N  R  S  W  *  H  F  Y  S  C  F  C  S  G  P  S  G  G  *  I  *  R  G  M  F  E  I  C  C :   C  S  R  F  S  M  C  S  S  E  R  S  H  S  K  H  A  *  K  E  S  S  V  Q  S  S  S  V  S  L  K  T  W  S  F  L  Y  H  L  L  V  Q  K  N  K  R  Y  C  S  K  Y  S  E  L  R  I  I  L  V  G  A  L  P  *  S  *  E  E  K  K  T  V  Q  K  D  S  L  L  R  K  R  E  R  E  W  T  Q  G  Y  L  D  E  V  P  V  D  N  Y  S  L  H  F  N  L  F  V  L  H  S  F  S  N  P  Y  Q  E  K  M  S  S  F  F  C  N  S  L  I  P  T  S  H  I  T  C  L  R  P  *  D  *  R :   N  T  *  *  D  N  V  V  F  T  I  S  A  Y  T  *  V  S  Q  I  F  *  N  Q  K  L  E  C  R  *  K  M  N  N  K  P  N  L  T  L  L  *  T  V  I  V  M  K  F  E  C  P  S  S  L  K  Y  A  S  </first_frame>
            <second_frame>  N  F  E  E  E  K  R  D  T  V  E  N  M  K  G  L  A  T  P  L  Q  S  K  Y  W  H  P  T  A  Q  N  N  L  K  N  P  E  S  F  N  L  Y  S  H  P  V  Q  F  N  G  K  N  N  N  P  I  S  R  K  V  K  P  I  S  C  F  A  S  E  N  Q  N  Q  P  I  L  K  E  S  K  P  P  L  V  V  V  G  S  A  N  A  D  I  Y  V  E  I  D  R  L  P  K  E  G  E  T  I  S  A  K  T  G  Q  T  L  A  G  G  K  G  A  N  Q  A  V  C  G  G  K  L  D  Y  P  T  F  F  I  G  Q  V  G  E  D  A  H  G  R  L  I  T  E  A  L  E  S  G  G  V  C  V  D  H  L  T  T  V  A  N  A  P  T  G  N  A  V  V  M  L  Q  S  D  G  E  N  S  I  I  I  V  G  G  A  N  M  S  C  W  P  E  E  L  S  Y  E  D  L  E  I  V  R  S  A  G  I  V  L  L  Q  R  E  I  P  D  F  V  N  I  Q  V  A  K  :  A  A  R  N  A  G  V  P  V  I  L  D  A  G  G  A  D  S  P  I  P  L  E  L  L  R  C  V  E  I  F  S  P  N  E  T  E  L  A  R  I  T  K  M  P  T  G  N  F  E  Q  I  S  N  A  V  E  Q  C  Y  D  M  :  G  V  N  Q  V  L  V  K  L  G  A  N  G  S  A  L  F  T  K  G  E  E  P  L  R  Q  P  I  I  K  A  A  K  V  I  D  T  T  G  A  G  D  T  F  T  A  A  F  A  V  A  L  V  E  G  K  S  K  E  E  C  L  R  F  A   : A  A  A  A  S  L  C  V  Q  V  K  G  A  I  P  S  M  P  E  K  R  A  V  F  N  L  L  Q  S  A  *  R  L  G  V  S  F  I  I  S  L  Y  K  K  I  R  G  T  V  L  N  I  Q  N  F  G  L  Y  *  L  V  L  Y  L  N  H  R  R  K  K  K  L  F  K  R  T  V  S  Y  E  K  G  N  E  S  G  L  K  G  I  *  M  K  F  Q  L  T  I  T  P  F  I  S  I  C  L  S  Y  I  P  F  L  I  R  I  K  K  K  C  L  L  F  F  A  T  L  *  F  Q  L  P  T  *  H  V  *  D  H  K  I  K   : G  I  H  N  K  I  M  L  S  S  Q  S  R  H  I  H  R  F  P  K  Y  F  E  T  K  N  *  N  V  D  E  R  *  T  T  N  Q  I  *  L  C  Y  K  L  *  *  *  *  N  L  N  V  P  L  P  S  N  M  P  L </second_frame>
            <third_frame>   I  L  K  K  K  R  G  I  L  *  K  T  *  K  V  *  Q  H  L  Y  N  Q  N  T  G  T  Q  Q  P  K  T  T  S  K  T  Q  K  V  S  I  F  T  V  T  Q  F  N  L  M  A  K  T  T  T  P  Y  Q  E  K  *  N  P  S  L  V  L  L  Q  R  T  K  I  S  Q  S  *  K  N  Q  S  L  H  W  L  *  L  D  Q  L  M  Q  I  S  M  W  R  L  I  G  Y  Q  K  K  G  K  Q  F  Q  L  K  Q  V  K  H  W  L  V  E  R  G  L  I  K  L  F  V  V  E  S  L  I  I  Q  L  F  L  L  V  K  L  V  K  M  L  M  G  D  *  L  L  K  L  *  R  V  V  G  F  V  W  I  T  L  L  L  L  L  M  L  Q  L  E  M  L  W  *  C  F  S  L  M  G  R  I  Q  L  L  L  L  V  V  Q  T  C  L  A  G  L  K  N  C  H  M  R  I  W  R  L  *  E  V  Q  G  L  C  C  S  K  G  K  F  Q  I  L  L  T  S  K  L  Q  R :   L  P  G  M  Q  V  F  Q  L  F  *  M  L  V  E  Q  T  L  Q  S  L  *  N  F  F  V  V  L  R  F  S  A  R  M  K  L  S  W  L  E  *  Q  K  C  Q  L  E  I  S  N  K  S  A  M  Q  W  N  S  A  M  T  W :   E  L  T  R  S  L  L  S  L  G  P  M  D  L  L  F  S  P  K  E  R  N  P  C  G  N  P  L  L  K  L  Q  K  S  L  I  Q  Q  E  L  V  T  L  L  Q  L  L  L  Q  W  P  *  W  R  V  N  L  K  R  N  V  *  D  L  L  :  L  Q  P  L  L  Y  V  F  K  *  K  E  P  F  Q  A  C  L  K  R  E  Q  C  S  I  F  F  S  Q  L  E  D  L  E  F  P  L  S  S  P  C  T  K  K  *  E  V  L  F  *  I  F  R  T  S  D  Y  I  S  W  C  F  T  L  I  I  G  G  K  K  N  C  S  K  G  Q  S  P  T  K  K  G  T  R  V  D  S  R  V  S  R  *  S  S  S  *  Q  L  L  P  S  F  Q  F  V  C  L  T  F  L  F  *  S  V  S  R  K  N  V  F  F  F  L  Q  L  F  D  S  N  F  P  H  N  M  F  K  T  I  R  L  K  :  E  Y  I  I  R  *  C  C  L  H  N  L  G  I  Y  I  G  F  P  N  I  L  K  P  K  I  R  M  *  M  K  D  E  Q  Q  T  K  S  D  F  V  I  N  C  D  S  N  E  I  *  M  S  L  F  P  Q  I  C  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57862" stop="57170"/>
                    <exon start="55800" stop="55615"/>
                    <exon start="55143" stop="54948"/>
                    <exon start="54704" stop="54613"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFEEEKRDTVENMKGLATPLQSKYWHPTAQNNLKNPESFNLYSHPVQFNGKNNNPISRKVKPISCFASENQNQPILKESKPPLVVVGSANADIYVEIDRLPKEGETISAKTGQTLAGGKGANQAVCGGKLDYPTFFIGQVGEDAHGRLITEALESGGVCVDHLTTVANAPTGNAVVMLQSDGENSIIIVGGANMSCWPEELSYEDLEIVRSAGIVLLQREIPDFVNIQVAKAARNAGVPVILDAGGADSPIPLELLRCVEIFSPNETELARITKMPTGNFEQISNAVEQCYDMGVNQVLVKLGANGSALFTKGEEPLRQPIIKAAKVIDTTGAGDTFTAAFAVALVEGKSKEECLRFAAAAASLCVQVKGAIPSMPEKRAVFNLLQSA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54505" stop="54290"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEKKTVQKDSLLRKREREWTQGYLDEVPVDNYSLHFNLFVLHSFSNPYQEKMSSFFCNSLIPTSHITCLRP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="54783" PGL_stop="55565"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54783" e_stop="55565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="54783" e_stop="55565" e_length="783"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54783" stop="55565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352063" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54783" stop="55448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354847" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGGTGACATGTACGCAGACCTCATCCTACCTTTGTGCGATAGAGAGGTTGTCTCTGATAGACCCTCAGCTCAAGAAAAAAGCTTAACGAAACATGTTTGAAGAAAAAATATAAGACTAATGAAGCTGAAACCAAAATTGGGAGAAAGCACCAGCATGCTTACCAGCAAATCTCAAACATTCCTCTTTAGATTTACCCTCCACTAGGGCCACTGCAAAAGCAGCTGTAAAAGTGTCACCAGCTCCTGTTGTATCAATGACTTTTGCAGCTTTAATAATGGGTTGCCGCAAGGGTTCCTCTCCTTTGGTGAAAAGAGCAGATCCATTGGCCCCAAGCTTAACAAGGACCTGGTTAACTCCCTGGGAAACAAAAGAGCGTGGAAACATCATTCCACAAAATCAAATTGATATAGTGACAAATTTACAGATATCTATTGTAATTTGTGACACCCCAAACATTGAGCAAGAAATCAGGAAAAGTAGCTAAATCTAACTAGGAATGTCCTACTAGGTCGGTGGACCAAACCAGAGCCCCACAAACAACACTGCATTAATCCATCATATTTATATGGAGAAGCAAAGCCATCACCAGACATTTATGACTCACCAAGCAAAAGTCTGTCAGGACCACTACATTTTGCAAAATCAATAGGGCAGGTAACTATAACAAATCAAAAGGGACTTTTAGACTCAGAACCCGAAAATGTAACTCAGATAGTTATTTTGGGTCACGGATACAGTCTAAATCAAGTGAAATGCTGCAAGCATATGTCCTGAATTTA</gDNA_template>
            <first_frame> G  R  *  H  V  R  R  P  H  P  T  F  V  R  *  R  G  C  L  *  *  T  L  S  S  R  K  K  L  N  E  T  C  L  K  K  K  Y  K  T  N  E  A  E  T  K  I  G  R  K  H  Q  H  A  Y  Q  Q  I  S  N  I  P  L  *  I  Y  P  P  L  G  P  L  Q  K  Q  L  *  K  C  H  Q  L  L  L  Y  Q  *  L  L  Q  L  *  *  W  V  A  A  R  V  P  L  L  W  *  K  E  Q  I  H  W  P  Q  A  *  Q  G  P  G  *  L  P  G  K  Q  K  S  V  E  T  S  F  H  K  I  K  L  I  *  *  Q  I  Y  R  Y  L  L  *  F  V  T  P  Q  T  L  S  K  K  S  G  K  V  A  K  S  N  *  E  C  P  T  R  S  V  D  Q  T  R  A  P  Q  T  T  L  H  *  S  I  I  F  I  W  R  S  K  A  I  T  R  H  L  *  L  T  K  Q  K  S  V  R  T  T  T  F  C  K  I  N  R  A  G  N  Y  N  K  S  K  G  T  F  R  L  R  T  R  K  C  N  S  D  S  Y  F  G  S  R  I  Q  S  K  S  S  E  M  L  Q  A  Y  V  L  N  L </first_frame>
            <second_frame>  E  G  D  M  Y  A  D  L  I  L  P  L  C  D  R  E  V  V  S  D  R  P  S  A  Q  E  K  S  L  T  K  H  V  *  R  K  N  I  R  L  M  K  L  K  P  K  L  G  E  S  T  S  M  L  T  S  K  S  Q  T  F  L  F  R  F  T  L  H  *  G  H  C  K  S  S  C  K  S  V  T  S  S  C  C  I  N  D  F  C  S  F  N  N  G  L  P  Q  G  F  L  S  F  G  E  K  S  R  S  I  G  P  K  L  N  K  D  L  V  N  S  L  G  N  K  R  A  W  K  H  H  S  T  K  S  N  *  Y  S  D  K  F  T  D  I  Y  C  N  L  *  H  P  K  H  *  A  R  N  Q  E  K  *  L  N  L  T  R  N  V  L  L  G  R  W  T  K  P  E  P  H  K  Q  H  C  I  N  P  S  Y  L  Y  G  E  A  K  P  S  P  D  I  Y  D  S  P  S  K  S  L  S  G  P  L  H  F  A  K  S  I  G  Q  V  T  I  T  N  Q  K  G  L  L  D  S  E  P  E  N  V  T  Q  I  V  I  L  G  H  G  Y  S  L  N  Q  V  K  C  C  K  H  M  S  *  I   </second_frame>
            <third_frame>   K  V  T  C  T  Q  T  S  S  Y  L  C  A  I  E  R  L  S  L  I  D  P  Q  L  K  K  K  A  *  R  N  M  F  E  E  K  I  *  D  *  *  S  *  N  Q  N  W  E  K  A  P  A  C  L  P  A  N  L  K  H  S  S  L  D  L  P  S  T  R  A  T  A  K  A  A  V  K  V  S  P  A  P  V  V  S  M  T  F  A  A  L  I  M  G  C  R  K  G  S  S  P  L  V  K  R  A  D  P  L  A  P  S  L  T  R  T  W  L  T  P  W  E  T  K  E  R  G  N  I  I  P  Q  N  Q  I  D  I  V  T  N  L  Q  I  S  I  V  I  C  D  T  P  N  I  E  Q  E  I  R  K  S  S  *  I  *  L  G  M  S  Y  *  V  G  G  P  N  Q  S  P  T  N  N  T  A  L  I  H  H  I  Y  M  E  K  Q  S  H  H  Q  T  F  M  T  H  Q  A  K  V  C  Q  D  H  Y  I  L  Q  N  Q  *  G  R  *  L  *  Q  I  K  R  D  F  *  T  Q  N  P  K  M  *  L  R  *  L  F  W  V  T  D  T  V  *  I  K  *  N  A  A  S  I  C  P  E  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54914" stop="55270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQNWEKAPACLPANLKHSSLDLPSTRATAKAAVKVSPAPVVSMTFAALIMGCRKGSSPLVKRADPLAPSLTRTWLTPWETKERGNIIPQNQIDIVTNLQISIVICDTPNIEQEIRKSS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55267" stop="55560"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNLTRNVLLGRWTKPEPHKQHCINPSYLYGEAKPSPDIYDSPSKSLSGPLHFAKSIGQVTITNQKGLLDSEPENVTQIVILGHGYSLNQVKCCKHMS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="57171" PGL_stop="57554"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57171" e_stop="57554"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="57171" e_stop="57554" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57171" stop="57554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281279" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGCAACTTGGATGTTAACAAAATCTGGAATTTCCCTTTGGAGCAACACAATCCCTGCACTTCTCACAATCTCCAAATCCTCATATGACAATTCTTCAGGCCAGCAAGACATGTTTGCACCACCAACAATAATAATTGAATTCTCCCCATCAGACTGAAGCATCACCACAGCATTTCCAGTTGGAGCATTAGCAACAGTAGTAAGGTGATCCACACAAACCCCACCACTCTCTAAAGCTTCAGTAATCAATCTCCCATGAGCATCTTCACCAACTTGACCAATAAAAAAAGTTGGATAATCAAGCTTTCCACCACAAACAGCTTGATTAGCCCCCTTTCCACCAGCCAATGTTTGACCTGTTTTAGCTGAAATTGTTTCCCCT</gDNA_template>
            <first_frame> F  A  T  W  M  L  T  K  S  G  I  S  L  W  S  N  T  I  P  A  L  L  T  I  S  K  S  S  Y  D  N  S  S  G  Q  Q  D  M  F  A  P  P  T  I  I  I  E  F  S  P  S  D  *  S  I  T  T  A  F  P  V  G  A  L  A  T  V  V  R  *  S  T  Q  T  P  P  L  S  K  A  S  V  I  N  L  P  *  A  S  S  P  T  *  P  I  K  K  V  G  *  S  S  F  P  P  Q  T  A  *  L  A  P  F  P  P  A  N  V  *  P  V  L  A  E  I  V  S  P </first_frame>
            <second_frame>  L  Q  L  G  C  *  Q  N  L  E  F  P  F  G  A  T  Q  S  L  H  F  S  Q  S  P  N  P  H  M  T  I  L  Q  A  S  K  T  C  L  H  H  Q  Q  *  *  L  N  S  P  H  Q  T  E  A  S  P  Q  H  F  Q  L  E  H  *  Q  Q  *  *  G  D  P  H  K  P  H  H  S  L  K  L  Q  *  S  I  S  H  E  H  L  H  Q  L  D  Q  *  K  K  L  D  N  Q  A  F  H  H  K  Q  L  D  *  P  P  F  H  Q  P  M  F  D  L  F  *  L  K  L  F  P   </second_frame>
            <third_frame>   C  N  L  D  V  N  K  I  W  N  F  P  L  E  Q  H  N  P  C  T  S  H  N  L  Q  I  L  I  *  Q  F  F  R  P  A  R  H  V  C  T  T  N  N  N  N  *  I  L  P  I  R  L  K  H  H  H  S  I  S  S  W  S  I  S  N  S  S  K  V  I  H  T  N  P  T  T  L  *  S  F  S  N  Q  S  P  M  S  I  F  T  N  L  T  N  K  K  S  W  I  I  K  L  S  T  T  N  S  L  I  S  P  L  S  T  S  Q  C  L  T  C  F  S  *  N  C  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0102J11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="59874" PGL_stop="62708"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59874" e_stop="60049"/>
            <exon e_start="60794" e_stop="60905"/>
            <exon e_start="62008" e_stop="62073"/>
            <exon e_start="62163" e_stop="62360"/>
            <exon e_start="62449" e_stop="62708"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.849" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59874" e_stop="60049" e_length="176"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.962">
            <gDNA_intron_boundary i_start="60050" i_stop="60793" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="60794" e_stop="60905" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.995">
            <gDNA_intron_boundary i_start="60906" i_stop="62007" i_length="1102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62008" e_stop="62073" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62074" i_stop="62162" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="62163" e_stop="62360" e_length="198"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.849">
            <gDNA_intron_boundary i_start="62361" i_stop="62448" i_length="88"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62449" e_stop="62708" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59874" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59875" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59880" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59880" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62465"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59880" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59880" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59880" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59883" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59884" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59887" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59888" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59905" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59915" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59935" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369544" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59959" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59977" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59977" stop="60049"/>
              <exon start="60794" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60807" stop="60905"/>
              <exon start="62008" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62034" stop="62073"/>
              <exon start="62163" stop="62360"/>
              <exon start="62449" stop="62708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295896" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATGGCTTCTCGAACCATACAAATCTCCTCTTTCAGCTCAGGATTGAACTTTTTATCGAAACCCCAATTGGGATTAAACGGCAAGCCAACTTTTGGAGGATTCAAAAGCAAAATTTCAGTCTCAATTCGTGCAATGGGCTCCTCAGCTTCTTCTTCCAAATCCGATAGTGTTCAAG : GGGGCAGTAAAATGGATTATAGCTCTATAAGCGACGAGGAGTGGAAGAAGAAGCTTACAAATGAACAATTTTATATTACACGGCAAAAGGGTACAGAACGGGCATTCACTGG : GGAGTACTGGAACAGTAAGACCCCTGGAACATATCACTGCATTTGCTGCGATACTCCTTTATTTGA : ATCTTCTACCAAATTTGATAGTGGAACCGGATGGCCATCGTACTACCAGCCCATAGACAACAATGTGAAGTCAAAGATGGACTTGTCTATCATTTTCATGCCTCGTCAAGAAGTTCTATGTGCAGCTTGCGATGCTCATCTTGGGCATGTATTTGATGATGGCCCTCCGCCTACTGGAAAGCGTTACTGCATCAATAG : CGCTTCCCTGAAATTGAAGGCAAAGTAGAGCTGTGCTGTGTAGAATACCAAAGGTTATTGATTCCTCAAGAAATGCAAGATATCAAGCTGCAGAATTATTCATATGCACGAATAATGTTGCTTCTAAAGTTTCAATCGAACTTTGAGAGAGTTTCTTCTCTGTGATGTTGTTAAAGTTCATATGTTCACATATACATAATATATAAGTTGGTCAAATGTACTCATTTTTAGCCTACTATACGTAGATATTTTACCTGTTT</gDNA_template>
            <first_frame> H  G  F  S  N  H  T  N  L  L  F  Q  L  R  I  E  L  F  I  E  T  P  I  G  I  K  R  Q  A  N  F  W  R  I  Q  K  Q  N  F  S  L  N  S  C  N  G  L  L  S  F  F  F  Q  I  R  *  C  S  R :   G  Q  *  N  G  L  *  L  Y  K  R  R  G  V  E  E  E  A  Y  K  *  T  I  L  Y  Y  T  A  K  G  Y  R  T  G  I  H  W  :  G  V  L  E  Q  *  D  P  W  N  I  S  L  H  L  L  R  Y  S  F  I  *  :  I  F  Y  Q  I  *  *  W  N  R  M  A  I  V  L  P  A  H  R  Q  Q  C  E  V  K  D  G  L  V  Y  H  F  H  A  S  S  R  S  S  M  C  S  L  R  C  S  S  W  A  C  I  *  *  W  P  S  A  Y  W  K  A  L  L  H  Q  *  :  R  F  P  E  I  E  G  K  V  E  L  C  C  V  E  Y  Q  R  L  L  I  P  Q  E  M  Q  D  I  K  L  Q  N  Y  S  Y  A  R  I  M  L  L  L  K  F  Q  S  N  F  E  R  V  S  S  L  *  C  C  *  S  S  Y  V  H  I  Y  I  I  Y  K  L  V  K  C  T  H  F  *  P  T  I  R  R  Y  F  T  C   </first_frame>
            <second_frame>  M  A  S  R  T  I  Q  I  S  S  F  S  S  G  L  N  F  L  S  K  P  Q  L  G  L  N  G  K  P  T  F  G  G  F  K  S  K  I  S  V  S  I  R  A  M  G  S  S  A  S  S  S  K  S  D  S  V  Q   : G  G  S  K  M  D  Y  S  S  I  S  D  E  E  W  K  K  K  L  T  N  E  Q  F  Y  I  T  R  Q  K  G  T  E  R  A  F  T  G :   E  Y  W  N  S  K  T  P  G  T  Y  H  C  I  C  C  D  T  P  L  F  E :   S  S  T  K  F  D  S  G  T  G  W  P  S  Y  Y  Q  P  I  D  N  N  V  K  S  K  M  D  L  S  I  I  F  M  P  R  Q  E  V  L  C  A  A  C  D  A  H  L  G  H  V  F  D  D  G  P  P  P  T  G  K  R  Y  C  I  N  S :   A  S  L  K  L  K  A  K  *  S  C  A  V  *  N  T  K  G  Y  *  F  L  K  K  C  K  I  S  S  C  R  I  I  H  M  H  E  *  C  C  F  *  S  F  N  R  T  L  R  E  F  L  L  C  D  V  V  K  V  H  M  F  T  Y  T  *  Y  I  S  W  S  N  V  L  I  F  S  L  L  Y  V  D  I  L  P  V  </second_frame>
            <third_frame>   W  L  L  E  P  Y  K  S  P  L  S  A  Q  D  *  T  F  Y  R  N  P  N  W  D  *  T  A  S  Q  L  L  E  D  S  K  A  K  F  Q  S  Q  F  V  Q  W  A  P  Q  L  L  L  P  N  P  I  V  F  K  :  G  A  V  K  W  I  I  A  L  *  A  T  R  S  G  R  R  S  L  Q  M  N  N  F  I  L  H  G  K  R  V  Q  N  G  H  S  L   : G  S  T  G  T  V  R  P  L  E  H  I  T  A  F  A  A  I  L  L  Y  L   : N  L  L  P  N  L  I  V  E  P  D  G  H  R  T  T  S  P  *  T  T  M  *  S  Q  R  W  T  C  L  S  F  S  C  L  V  K  K  F  Y  V  Q  L  A  M  L  I  L  G  M  Y  L  M  M  A  L  R  L  L  E  S  V  T  A  S  I   : A  L  P  *  N  *  R  Q  S  R  A  V  L  C  R  I  P  K  V  I  D  S  S  R  N  A  R  Y  Q  A  A  E  L  F  I  C  T  N  N  V  A  S  K  V  S  I  E  L  *  E  S  F  F  S  V  M  L  L  K  F  I  C  S  H  I  H  N  I  *  V  G  Q  M  Y  S  F  L  A  Y  Y  T  *  I  F  Y  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59875" stop="60049"/>
                    <exon start="60794" stop="60905"/>
                    <exon start="62008" stop="62073"/>
                    <exon start="62163" stop="62360"/>
                    <exon start="62449" stop="62476"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MASRTIQISSFSSGLNFLSKPQLGLNGKPTFGGFKSKISVSIRAMGSSASSSKSDSVQGGSKMDYSSISDEEWKKKLTNEQFYITRQKGTERAFTGEYWNSKTPGTYHCICCDTPLFESSTKFDSGTGWPSYYQPIDNNVKSKMDLSIIFMPRQEVLCAACDAHLGHVFDDGPPPTGKRYCINSASLKLKAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="66993" PGL_stop="68235"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66993" e_stop="67070"/>
            <exon e_start="67160" e_stop="67324"/>
            <exon e_start="67877" e_stop="68235"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.987"/>
          <exon-intron don_prob="0.975" acc_prob="0.858" e_score="0.994"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="66993" e_stop="67070" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="67071" i_stop="67159" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="67160" e_stop="67324" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.858">
            <gDNA_intron_boundary i_start="67325" i_stop="67876" i_length="552"/>
          </intron>
          <exon e_serial="3" e_score="0.944">
            <gDNA_exon_boundary e_start="67877" e_stop="68235" e_length="359"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66993" stop="67070"/>
              <exon start="67160" stop="67324"/>
              <exon start="67877" stop="68235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604602" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTCCTGTCGGAGAAACTTTGATATAGATGTGACACTGATGGATAACTTTAGCCGCCCCATGACTGAAGAAGCGGAG : GTTGTTGCTTCGCTTGTGTACTCTGATGATAATACACTGGTTGAGAAGCCAGTTGATGCTGATGCAGCCCTTCTTACAAGTTATGATGGAATTGAATATGCTTCTTCTGATAGACCAAGCAAAGTAATTAGTGGACGTGCTTCCTTTAAGCTCAAGATATCTCAG : CTTTCATCCAAGTGCGATAACAGGCTGTTCCGCATTAGGTTTGACATTCCAAGACTGGGTAAATATCCTTTCCTTGAGGTATTTTCCAGACCAATACGGTGTATTTCTCGGAATCGCAGCACGCGGGCGACCTCTCTAATGTTGAAGAAATCATCTTTGGGGATCCATTTGCTAAATGGATCTCAATCTCCTGTGTTGGACGATGGATCTTATGATCGTCCCTGTATTGTACGTGAAGCAAAACAAAGTCCATCATCAAAACGGGTCAAATTAGGACAAGAGAAACTATGTGCAAATTTTAAGGATGATTTTGTGCTGAAGCAAGCTAACGGTGGTTCAAGATCTCATTCCTGGACCTC</gDNA_template>
            <first_frame> A  S  C  R  R  N  F  D  I  D  V  T  L  M  D  N  F  S  R  P  M  T  E  E  A  E  :  V  V  A  S  L  V  Y  S  D  D  N  T  L  V  E  K  P  V  D  A  D  A  A  L  L  T  S  Y  D  G  I  E  Y  A  S  S  D  R  P  S  K  V  I  S  G  R  A  S  F  K  L  K  I  S  Q  :  L  S  S  K  C  D  N  R  L  F  R  I  R  F  D  I  P  R  L  G  K  Y  P  F  L  E  V  F  S  R  P  I  R  C  I  S  R  N  R  S  T  R  A  T  S  L  M  L  K  K  S  S  L  G  I  H  L  L  N  G  S  Q  S  P  V  L  D  D  G  S  Y  D  R  P  C  I  V  R  E  A  K  Q  S  P  S  S  K  R  V  K  L  G  Q  E  K  L  C  A  N  F  K  D  D  F  V  L  K  Q  A  N  G  G  S  R  S  H  S  W  T   </first_frame>
            <second_frame>  P  P  V  G  E  T  L  I  *  M  *  H  *  W  I  T  L  A  A  P  *  L  K  K  R  R :   L  L  L  R  L  C  T  L  M  I  I  H  W  L  R  S  Q  L  M  L  M  Q  P  F  L  Q  V  M  M  E  L  N  M  L  L  L  I  D  Q  A  K  *  L  V  D  V  L  P  L  S  S  R  Y  L  S :   F  H  P  S  A  I  T  G  C  S  A  L  G  L  T  F  Q  D  W  V  N  I  L  S  L  R  Y  F  P  D  Q  Y  G  V  F  L  G  I  A  A  R  G  R  P  L  *  C  *  R  N  H  L  W  G  S  I  C  *  M  D  L  N  L  L  C  W  T  M  D  L  M  I  V  P  V  L  Y  V  K  Q  N  K  V  H  H  Q  N  G  S  N  *  D  K  R  N  Y  V  Q  I  L  R  M  I  L  C  *  S  K  L  T  V  V  Q  D  L  I  P  G  P  </second_frame>
            <third_frame>   L  L  S  E  K  L  *  Y  R  C  D  T  D  G  *  L  *  P  P  H  D  *  R  S  G   : G  C  C  F  A  C  V  L  *  *  *  Y  T  G  *  E  A  S  *  C  *  C  S  P  S  Y  K  L  *  W  N  *  I  C  F  F  *  *  T  K  Q  S  N  *  W  T  C  F  L  *  A  Q  D  I  S   : A  F  I  Q  V  R  *  Q  A  V  P  H  *  V  *  H  S  K  T  G  *  I  S  F  P  *  G  I  F  Q  T  N  T  V  Y  F  S  E  S  Q  H  A  G  D  L  S  N  V  E  E  I  I  F  G  D  P  F  A  K  W  I  S  I  S  C  V  G  R  W  I  L  *  S  S  L  Y  C  T  *  S  K  T  K  S  I  I  K  T  G  Q  I  R  T  R  E  T  M  C  K  F  *  G  *  F  C  A  E  A  S  *  R  W  F  K  I  S  F  L  D  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66993" stop="67070"/>
                    <exon start="67160" stop="67324"/>
                    <exon start="67877" stop="68233"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASCRRNFDIDVTLMDNFSRPMTEEAEVVASLVYSDDNTLVEKPVDADAALLTSYDGIEYASSDRPSKVISGRASFKLKISQLSSKCDNRLFRIRFDIPRLGKYPFLEVFSRPIRCISRNRSTRATSLMLKKSSLGIHLLNGSQSPVLDDGSYDRPCIVREAKQSPSSKRVKLGQEKLCANFKDDFVLKQANGGSRSHSWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="69340" PGL_stop="71941"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69340" e_stop="69527"/>
            <exon e_start="70382" e_stop="70544"/>
            <exon e_start="71241" e_stop="71590"/>
            <exon e_start="71749" e_stop="71826"/>
            <exon e_start="71905" e_stop="71941"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.967" e_score="0.963"/>
          <exon-intron don_prob="0.933" acc_prob="0.924" e_score="0.975"/>
          <exon-intron don_prob="1.000" acc_prob="0.126" e_score="0.948"/>
          <exon-intron don_prob="0.998" acc_prob="0.459" e_score="0.987"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="69340" e_stop="69527" e_length="188"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.967">
            <gDNA_intron_boundary i_start="69528" i_stop="70381" i_length="854"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="70382" e_stop="70544" e_length="163"/>
          </exon>
          <intron i_serial="2" don_prob="0.933" acc_prob="0.924">
            <gDNA_intron_boundary i_start="70545" i_stop="71240" i_length="696"/>
          </intron>
          <exon e_serial="3" e_score="0.948">
            <gDNA_exon_boundary e_start="71241" e_stop="71590" e_length="350"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.126">
            <gDNA_intron_boundary i_start="71591" i_stop="71748" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="71749" e_stop="71826" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.459">
            <gDNA_intron_boundary i_start="71827" i_stop="71904" i_length="78"/>
          </intron>
          <exon e_serial="5" e_score="0.973">
            <gDNA_exon_boundary e_start="71905" e_stop="71941" e_length="37"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69340" stop="69527"/>
              <exon start="70382" stop="70544"/>
              <exon start="71241" stop="71567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69340" stop="69527"/>
              <exon start="70382" stop="70544"/>
              <exon start="71241" stop="71448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71482" stop="71590"/>
              <exon start="71749" stop="71826"/>
              <exon start="71905" stop="71941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336074" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTCGCCCGTTGATGACTTGCCAAATAACAGAGATCCGATTTCGGATATGGTTGTTTTTAAATACTGTCTCGCTGATCTCAACGAGAGGCGTCTTCTTCTCAAGGAAATGGCAATGACTGCTAAAGAAGAAGAACTTGCAACCTTTGCCGAGAGAGTCTCTTTATTCTCTGGATGTTCACACCACAG : GCATCAAATATCAATTTCAAAGAGGCTGATAGAAGAGGGAATTAACTGTTGGAACTTAATATCCAACTATAACCACCATGTCCTCTGGGAGAATTTGGTGTCTGGGCTTCAAGAGCATTTCCTGAAGATGACATTTGGTCGTATCAGATCTCTAACTCATCAG : GATTTCAACCTCCTGAGGAGAGTCTCTGGTTGTCAAGATCTAGTGTCTCAAGACAACTTTGAAAAGTTGTGGTGTTGGCTGTACCCAGTAGCTTTTACATTGTCACAGCAATGTATTTCTTCATTGTGGGGTTCAACATCACCCGTGTGGATCGAAGGGTTCATTACCAAGGAAGAAGCAGAATCTTCACTTACAATTCTGGGAGCTCTTCAAGAACCAGGTACTTATATACTGCGATTTCCTACATCAAGGAGCTGGCCCCACCCTGACGCTGGTAACTTGGTCGTCACTTATGTTGGAAGTGACTACACCATTCACCACAGGCTTATATCCCTCGAGTCCATTTACAG : TTCTGGGGTCAAGGGAACGACGATAAGGCCAATTCAAGACATGCTGCTTGAACAGCCTGAGCTCAGGCGACTCGGAAG : GATTGTGAGAAGCTTGTAGGTCACTCAAGATTTATAC</gDNA_template>
            <first_frame> N  S  P  V  D  D  L  P  N  N  R  D  P  I  S  D  M  V  V  F  K  Y  C  L  A  D  L  N  E  R  R  L  L  L  K  E  M  A  M  T  A  K  E  E  E  L  A  T  F  A  E  R  V  S  L  F  S  G  C  S  H  H  R :   H  Q  I  S  I  S  K  R  L  I  E  E  G  I  N  C  W  N  L  I  S  N  Y  N  H  H  V  L  W  E  N  L  V  S  G  L  Q  E  H  F  L  K  M  T  F  G  R  I  R  S  L  T  H  Q  :  D  F  N  L  L  R  R  V  S  G  C  Q  D  L  V  S  Q  D  N  F  E  K  L  W  C  W  L  Y  P  V  A  F  T  L  S  Q  Q  C  I  S  S  L  W  G  S  T  S  P  V  W  I  E  G  F  I  T  K  E  E  A  E  S  S  L  T  I  L  G  A  L  Q  E  P  G  T  Y  I  L  R  F  P  T  S  R  S  W  P  H  P  D  A  G  N  L  V  V  T  Y  V  G  S  D  Y  T  I  H  H  R  L  I  S  L  E  S  I  Y  S :   S  G  V  K  G  T  T  I  R  P  I  Q  D  M  L  L  E  Q  P  E  L  R  R  L  G  R :   I  V  R  S  L  *  V  T  Q  D  L  Y </first_frame>
            <second_frame>  T  R  P  L  M  T  C  Q  I  T  E  I  R  F  R  I  W  L  F  L  N  T  V  S  L  I  S  T  R  G  V  F  F  S  R  K  W  Q  *  L  L  K  K  K  N  L  Q  P  L  P  R  E  S  L  Y  S  L  D  V  H  T  T   : G  I  K  Y  Q  F  Q  R  G  *  *  K  R  E  L  T  V  G  T  *  Y  P  T  I  T  T  M  S  S  G  R  I  W  C  L  G  F  K  S  I  S  *  R  *  H  L  V  V  S  D  L  *  L  I  R :   I  S  T  S  *  G  E  S  L  V  V  K  I  *  C  L  K  T  T  L  K  S  C  G  V  G  C  T  Q  *  L  L  H  C  H  S  N  V  F  L  H  C  G  V  Q  H  H  P  C  G  S  K  G  S  L  P  R  K  K  Q  N  L  H  L  Q  F  W  E  L  F  K  N  Q  V  L  I  Y  C  D  F  L  H  Q  G  A  G  P  T  L  T  L  V  T  W  S  S  L  M  L  E  V  T  T  P  F  T  T  G  L  Y  P  S  S  P  F  T   : V  L  G  S  R  E  R  R  *  G  Q  F  K  T  C  C  L  N  S  L  S  S  G  D  S  E   : G  L  *  E  A  C  R  S  L  K  I  Y   </second_frame>
            <third_frame>   L  A  R  *  *  L  A  K  *  Q  R  S  D  F  G  Y  G  C  F  *  I  L  S  R  *  S  Q  R  E  A  S  S  S  Q  G  N  G  N  D  C  *  R  R  R  T  C  N  L  C  R  E  S  L  F  I  L  W  M  F  T  P  Q  :  A  S  N  I  N  F  K  E  A  D  R  R  G  N  *  L  L  E  L  N  I  Q  L  *  P  P  C  P  L  G  E  F  G  V  W  A  S  R  A  F  P  E  D  D  I  W  S  Y  Q  I  S  N  S  S   : G  F  Q  P  P  E  E  S  L  W  L  S  R  S  S  V  S  R  Q  L  *  K  V  V  V  L  A  V  P  S  S  F  Y  I  V  T  A  M  Y  F  F  I  V  G  F  N  I  T  R  V  D  R  R  V  H  Y  Q  G  R  S  R  I  F  T  Y  N  S  G  S  S  S  R  T  R  Y  L  Y  T  A  I  S  Y  I  K  E  L  A  P  P  *  R  W  *  L  G  R  H  L  C  W  K  *  L  H  H  S  P  Q  A  Y  I  P  R  V  H  L  Q  :  F  W  G  Q  G  N  D  D  K  A  N  S  R  H  A  A  *  T  A  *  A  Q  A  T  R  K  :  D  C  E  K  L  V  G  H  S  R  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69340" stop="69527"/>
                    <exon start="70382" stop="70544"/>
                    <exon start="71241" stop="71590"/>
                    <exon start="71749" stop="71826"/>
                    <exon start="71905" stop="71923"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSPVDDLPNNRDPISDMVVFKYCLADLNERRLLLKEMAMTAKEEELATFAERVSLFSGCSHHRHQISISKRLIEEGINCWNLISNYNHHVLWENLVSGLQEHFLKMTFGRIRSLTHQDFNLLRRVSGCQDLVSQDNFEKLWCWLYPVAFTLSQQCISSLWGSTSPVWIEGFITKEEAESSLTILGALQEPGTYILRFPTSRSWPHPDAGNLVVTYVGSDYTIHHRLISLESIYSSGVKGTTIRPIQDMLLEQPELRRLGRIVRSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="73477" PGL_stop="75796"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73487" e_stop="73574"/>
            <exon e_start="74276" e_stop="74318"/>
            <exon e_start="74396" e_stop="74537"/>
            <exon e_start="74617" e_stop="74955"/>
            <exon e_start="75225" e_stop="75479"/>
            <exon e_start="75556" e_stop="75796"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.954" e_score="0.909"/>
          <exon-intron don_prob="0.948" acc_prob="0.262" e_score="0.860"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="0.986"/>
          <exon-intron don_prob="0.974" acc_prob="0.970" e_score="0.994"/>
          <exon-intron don_prob="0.896" acc_prob="0.995" e_score="0.988"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="73487" e_stop="73574" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.954">
            <gDNA_intron_boundary i_start="73575" i_stop="74275" i_length="701"/>
          </intron>
          <exon e_serial="2" e_score="0.860">
            <gDNA_exon_boundary e_start="74276" e_stop="74318" e_length="43"/>
          </exon>
          <intron i_serial="2" don_prob="0.948" acc_prob="0.262">
            <gDNA_intron_boundary i_start="74319" i_stop="74395" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="74396" e_stop="74537" e_length="142"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="74538" i_stop="74616" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="74617" e_stop="74955" e_length="339"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.970">
            <gDNA_intron_boundary i_start="74956" i_stop="75224" i_length="269"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="75225" e_stop="75479" e_length="255"/>
          </exon>
          <intron i_serial="5" don_prob="0.896" acc_prob="0.995">
            <gDNA_intron_boundary i_start="75480" i_stop="75555" i_length="76"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="75556" e_stop="75796" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73487" stop="73574"/>
              <exon start="74276" stop="74318"/>
              <exon start="74396" stop="74537"/>
              <exon start="74617" stop="74895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74617" stop="74955"/>
              <exon start="75225" stop="75479"/>
              <exon start="75556" stop="75796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701239" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGGTTTTTTTAAAAAAAATATTTGCTGGGGTACCTTCTTGATGTCTGCTTCAAGAAAATGAGCACTTTCTGCAATAAAGTTTCAAG : TTAAAGCTGAGAGGCCAAAAGTCTAAAGTTATTGAGTATTCAG : AACTAAATGGGAAATTCTAAAAATATTGCTCTCTATGTAACAATATGTGTGATTTCTTTTATCATCTCGAAGATTATTATGACAATCGTCTGTTACCGTAGATGGAAGAGAAAGCAAATGGTTGTTCAAGACAGCTTATCTG : GTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGTAAAGAGGTTAAACAGAATAAGTGCAGAACAAGACAGAGGTTTTGAAAGAGAGTTGGAGGCAATGGGGGACATAAAGCATCGAAATATAGTGACACTTCATGGATACTACAGTACAACGCAGTATAATCTTCTGATATATGAGCTTATGACTAATGGAAGTTTAGATGAAGCACTTCATG : GAAAATCGGCTGCCAGGAAGGTTTTGGATTGGCCTACAAGATACAAAATAGCAGTAGGAGCAGCAAGAGGATTATCATATCTACATCACGATTGCATCCCTCACATCATCCACAGAGATATAAAGTCAAGCAATATCTTGTTGGGTCATAACATGGAGGCTCGAGTATCTGATTTTGGACTAGCCACTCTGATGGAGCCAGATAAGACGCACGTTTCAACTTTGGTAGCTGGAACTTTTGGATATTTGGCTCCTG : AATATTTTGACACCGGAAAAGCAACAGTCAAAGGAGATGTTTACAGCTTTGGAGTTGTCTTACTGGAACTTCTAACTGGGAAAAAGCCATCAGATGAAGCATTTTTGGAGGAAGGAACCAGACTTGTAACTTGGGTAAGCTTGTAGTTCACCTTTTTTCTTTTTTATCCTAGCTGCTTTCGAGCTGTCATTAATTCGGTCAGTTGATACTGTTCTGCTTTACAGGTGAAGACAGTTGTTCA</gDNA_template>
            <first_frame> F  G  F  F  K  K  N  I  C  W  G  T  F  L  M  S  A  S  R  K  *  A  L  S  A  I  K  F  Q   : V  K  A  E  R  P  K  V  *  S  Y  *  V  F  R :   T  K  W  E  I  L  K  I  L  L  S  M  *  Q  Y  V  *  F  L  L  S  S  R  R  L  L  *  Q  S  S  V  T  V  D  G  R  E  S  K  W  L  F  K  T  A  Y  L  :  V  E  N  *  *  C  L  S  H  R  K  *  T  R  *  S  P  T  C  S  *  R  G  P  *  S  *  L  T  K  I  L  *  D  Q  E  A  M  E  Q  S  I  N  *  Q  L  T  N  Q  F  L  S  R  *  R  G  *  T  E  *  V  Q  N  K  T  E  V  L  K  E  S  W  R  Q  W  G  T  *  S  I  E  I  *  *  H  F  M  D  T  T  V  Q  R  S  I  I  F  *  Y  M  S  L  *  L  M  E  V  *  M  K  H  F  M  :  E  N  R  L  P  G  R  F  W  I  G  L  Q  D  T  K  *  Q  *  E  Q  Q  E  D  Y  H  I  Y  I  T  I  A  S  L  T  S  S  T  E  I  *  S  Q  A  I  S  C  W  V  I  T  W  R  L  E  Y  L  I  L  D  *  P  L  *  W  S  Q  I  R  R  T  F  Q  L  W  *  L  E  L  L  D  I  W  L  L  :  N  I  L  T  P  E  K  Q  Q  S  K  E  M  F  T  A  L  E  L  S  Y  W  N  F  *  L  G  K  S  H  Q  M  K  H  F  W  R  K  E  P  D  L  *  L  G  *  A  C  S  S  P  F  F  F  F  I  L  A  A  F  E  L  S  L  I  R  S  V  D  T  V  L  L  Y  R  *  R  Q  L  F  </first_frame>
            <second_frame>  L  V  F  L  K  K  I  F  A  G  V  P  S  *  C  L  L  Q  E  N  E  H  F  L  Q  *  S  F  K  :  L  K  L  R  G  Q  K  S  K  V  I  E  Y  S   : E  L  N  G  K  F  *  K  Y  C  S  L  C  N  N  M  C  D  F  F  Y  H  L  E  D  Y  Y  D  N  R  L  L  P  *  M  E  E  K  A  N  G  C  S  R  Q  L  I  W :   W  K  T  S  D  V  *  V  T  E  N  E  H  V  E  V  Q  H  V  L  E  E  D  H  E  A  D  *  Q  R  Y  Y  R  I  R  R  L  W  N  S  L  *  T  D  N  *  R  I  N  F  F  R  G  K  E  V  K  Q  N  K  C  R  T  R  Q  R  F  *  K  R  V  G  G  N  G  G  H  K  A  S  K  Y  S  D  T  S  W  I  L  Q  Y  N  A  V  *  S  S  D  I  *  A  Y  D  *  W  K  F  R  *  S  T  S  W :   K  I  G  C  Q  E  G  F  G  L  A  Y  K  I  Q  N  S  S  R  S  S  K  R  I  I  I  S  T  S  R  L  H  P  S  H  H  P  Q  R  Y  K  V  K  Q  Y  L  V  G  S  *  H  G  G  S  S  I  *  F  W  T  S  H  S  D  G  A  R  *  D  A  R  F  N  F  G  S  W  N  F  W  I  F  G  S  * :   I  F  *  H  R  K  S  N  S  Q  R  R  C  L  Q  L  W  S  C  L  T  G  T  S  N  W  E  K  A  I  R  *  S  I  F  G  G  R  N  Q  T  C  N  L  G  K  L  V  V  H  L  F  S  F  L  S  *  L  L  S  S  C  H  *  F  G  Q  L  I  L  F  C  F  T  G  E  D  S  C  S </second_frame>
            <third_frame>   W  F  F  *  K  K  Y  L  L  G  Y  L  L  D  V  C  F  K  K  M  S  T  F  C  N  K  V  S  S :   *  S  *  E  A  K  S  L  K  L  L  S  I  Q  :  N  *  M  G  N  S  K  N  I  A  L  Y  V  T  I  C  V  I  S  F  I  I  S  K  I  I  M  T  I  V  C  Y  R  R  W  K  R  K  Q  M  V  V  Q  D  S  L  S   : G  G  K  L  V  M  F  K  S  P  K  M  N  T  L  K  S  N  M  F  L  K  R  T  M  K  L  T  N  K  D  I  I  G  S  G  G  Y  G  T  V  Y  K  L  T  I  N  E  S  I  S  F  A  V  K  R  L  N  R  I  S  A  E  Q  D  R  G  F  E  R  E  L  E  A  M  G  D  I  K  H  R  N  I  V  T  L  H  G  Y  Y  S  T  T  Q  Y  N  L  L  I  Y  E  L  M  T  N  G  S  L  D  E  A  L  H   : G  K  S  A  A  R  K  V  L  D  W  P  T  R  Y  K  I  A  V  G  A  A  R  G  L  S  Y  L  H  H  D  C  I  P  H  I  I  H  R  D  I  K  S  S  N  I  L  L  G  H  N  M  E  A  R  V  S  D  F  G  L  A  T  L  M  E  P  D  K  T  H  V  S  T  L  V  A  G  T  F  G  Y  L  A  P   : E  Y  F  D  T  G  K  A  T  V  K  G  D  V  Y  S  F  G  V  V  L  L  E  L  L  T  G  K  K  P  S  D  E  A  F  L  E  E  G  T  R  L  V  T  W  V  S  L  *  F  T  F  F  L  F  Y  P  S  C  F  R  A  V  I  N  S  V  S  *  Y  C  S  A  L  Q  V  K  T  V  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74402" stop="74537"/>
                    <exon start="74617" stop="74955"/>
                    <exon start="75225" stop="75479"/>
                    <exon start="75556" stop="75701"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGNSKNIALYVTICVISFIISKIIMTIVCYRRWKRKQMVVQDSLSGGKLVMFKSPKMNTLKSNMFLKRTMKLTNKDIIGSGGYGTVYKLTINESISFAVKRLNRISAEQDRGFERELEAMGDIKHRNIVTLHGYYSTTQYNLLIYELMTNGSLDEALHGKSAARKVLDWPTRYKIAVGAARGLSYLHHDCIPHIIHRDIKSSNILLGHNMEARVSDFGLATLMEPDKTHVSTLVAGTFGYLAPEYFDTGKATVKGDVYSFGVVLLELLTGKKPSDEAFLEEGTRLVTWVSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="73477" e_stop="73574"/>
            <exon e_start="73923" e_stop="73973"/>
            <exon e_start="74276" e_stop="74318"/>
            <exon e_start="74396" e_stop="74537"/>
            <exon e_start="74617" e_stop="74955"/>
            <exon e_start="75225" e_stop="75479"/>
            <exon e_start="75556" e_stop="75796"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.992" e_score="0.980"/>
          <exon-intron don_prob="0.000" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.262" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.970" e_score="0.994"/>
          <exon-intron don_prob="0.896" acc_prob="0.995" e_score="0.988"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="73477" e_stop="73574" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.992">
            <gDNA_intron_boundary i_start="73575" i_stop="73922" i_length="348"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73923" e_stop="73973" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.954">
            <gDNA_intron_boundary i_start="73974" i_stop="74275" i_length="302"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74276" e_stop="74318" e_length="43"/>
          </exon>
          <intron i_serial="3" don_prob="0.948" acc_prob="0.262">
            <gDNA_intron_boundary i_start="74319" i_stop="74395" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74396" e_stop="74537" e_length="142"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="74538" i_stop="74616" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="74617" e_stop="74955" e_length="339"/>
          </exon>
          <intron i_serial="5" don_prob="0.974" acc_prob="0.970">
            <gDNA_intron_boundary i_start="74956" i_stop="75224" i_length="269"/>
          </intron>
          <exon e_serial="6" e_score="0.988">
            <gDNA_exon_boundary e_start="75225" e_stop="75479" e_length="255"/>
          </exon>
          <intron i_serial="6" don_prob="0.896" acc_prob="0.995">
            <gDNA_intron_boundary i_start="75480" i_stop="75555" i_length="76"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="75556" e_stop="75796" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73477" stop="73574"/>
              <exon start="73923" stop="73973"/>
              <exon start="74276" stop="74318"/>
              <exon start="74396" stop="74537"/>
              <exon start="74617" stop="74776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74617" stop="74955"/>
              <exon start="75225" stop="75479"/>
              <exon start="75556" stop="75796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701239" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTTTTTCTTTGGTTTTTTTAAAAAAAATATTTGCTGGGGTACCTTCTTGATGTCTGCTTCAAGAAAATGAGCACTTTCTGCAATAAAGTTTCAAG : GAAGATATTGTTCTGTTGGGAATATCAGTAGCTTTGGTTGTTGAATCTCGT : TTAAAGCTGAGAGGCCAAAAGTCTAAAGTTATTGAGTATTCAG : AACTAAATGGGAAATTCTAAAAATATTGCTCTCTATGTAACAATATGTGTGATTTCTTTTATCATCTCGAAGATTATTATGACAATCGTCTGTTACCGTAGATGGAAGAGAAAGCAAATGGTTGTTCAAGACAGCTTATCTG : GTGGAAAACTAGTGATGTTTAAGTCACCGAAAATGAACACGTTGAAGTCCAACATGTTCTTGAAGAGGACCATGAAGCTGACTAACAAAGATATTATAGGATCAGGAGGCTATGGAACAGTCTATAAACTGACAATTAACGAATCAATTTCTTTCGCGGTAAAGAGGTTAAACAGAATAAGTGCAGAACAAGACAGAGGTTTTGAAAGAGAGTTGGAGGCAATGGGGGACATAAAGCATCGAAATATAGTGACACTTCATGGATACTACAGTACAACGCAGTATAATCTTCTGATATATGAGCTTATGACTAATGGAAGTTTAGATGAAGCACTTCATG : GAAAATCGGCTGCCAGGAAGGTTTTGGATTGGCCTACAAGATACAAAATAGCAGTAGGAGCAGCAAGAGGATTATCATATCTACATCACGATTGCATCCCTCACATCATCCACAGAGATATAAAGTCAAGCAATATCTTGTTGGGTCATAACATGGAGGCTCGAGTATCTGATTTTGGACTAGCCACTCTGATGGAGCCAGATAAGACGCACGTTTCAACTTTGGTAGCTGGAACTTTTGGATATTTGGCTCCTG : AATATTTTGACACCGGAAAAGCAACAGTCAAAGGAGATGTTTACAGCTTTGGAGTTGTCTTACTGGAACTTCTAACTGGGAAAAAGCCATCAGATGAAGCATTTTTGGAGGAAGGAACCAGACTTGTAACTTGGGTAAGCTTGTAGTTCACCTTTTTTCTTTTTTATCCTAGCTGCTTTCGAGCTGTCATTAATTCGGTCAGTTGATACTGTTCTGCTTTACAGGTGAAGACAGTTGTTCA</gDNA_template>
            <first_frame> *  F  F  L  W  F  F  *  K  K  Y  L  L  G  Y  L  L  D  V  C  F  K  K  M  S  T  F  C  N  K  V  S  R :   K  I  L  F  C  W  E  Y  Q  *  L  W  L  L  N  L  V :   *  S  *  E  A  K  S  L  K  L  L  S  I  Q  :  N  *  M  G  N  S  K  N  I  A  L  Y  V  T  I  C  V  I  S  F  I  I  S  K  I  I  M  T  I  V  C  Y  R  R  W  K  R  K  Q  M  V  V  Q  D  S  L  S   : G  G  K  L  V  M  F  K  S  P  K  M  N  T  L  K  S  N  M  F  L  K  R  T  M  K  L  T  N  K  D  I  I  G  S  G  G  Y  G  T  V  Y  K  L  T  I  N  E  S  I  S  F  A  V  K  R  L  N  R  I  S  A  E  Q  D  R  G  F  E  R  E  L  E  A  M  G  D  I  K  H  R  N  I  V  T  L  H  G  Y  Y  S  T  T  Q  Y  N  L  L  I  Y  E  L  M  T  N  G  S  L  D  E  A  L  H   : G  K  S  A  A  R  K  V  L  D  W  P  T  R  Y  K  I  A  V  G  A  A  R  G  L  S  Y  L  H  H  D  C  I  P  H  I  I  H  R  D  I  K  S  S  N  I  L  L  G  H  N  M  E  A  R  V  S  D  F  G  L  A  T  L  M  E  P  D  K  T  H  V  S  T  L  V  A  G  T  F  G  Y  L  A  P   : E  Y  F  D  T  G  K  A  T  V  K  G  D  V  Y  S  F  G  V  V  L  L  E  L  L  T  G  K  K  P  S  D  E  A  F  L  E  E  G  T  R  L  V  T  W  V  S  L  *  F  T  F  F  L  F  Y  P  S  C  F  R  A  V  I  N  S  V  S  *  Y  C  S  A  L  Q  V  K  T  V  V   </first_frame>
            <second_frame>  D  F  F  F  G  F  F  K  K  N  I  C  W  G  T  F  L  M  S  A  S  R  K  *  A  L  S  A  I  K  F  Q   : G  R  Y  C  S  V  G  N  I  S  S  F  G  C  *  I  S   : F  K  A  E  R  P  K  V  *  S  Y  *  V  F  R :   T  K  W  E  I  L  K  I  L  L  S  M  *  Q  Y  V  *  F  L  L  S  S  R  R  L  L  *  Q  S  S  V  T  V  D  G  R  E  S  K  W  L  F  K  T  A  Y  L  :  V  E  N  *  *  C  L  S  H  R  K  *  T  R  *  S  P  T  C  S  *  R  G  P  *  S  *  L  T  K  I  L  *  D  Q  E  A  M  E  Q  S  I  N  *  Q  L  T  N  Q  F  L  S  R  *  R  G  *  T  E  *  V  Q  N  K  T  E  V  L  K  E  S  W  R  Q  W  G  T  *  S  I  E  I  *  *  H  F  M  D  T  T  V  Q  R  S  I  I  F  *  Y  M  S  L  *  L  M  E  V  *  M  K  H  F  M  :  E  N  R  L  P  G  R  F  W  I  G  L  Q  D  T  K  *  Q  *  E  Q  Q  E  D  Y  H  I  Y  I  T  I  A  S  L  T  S  S  T  E  I  *  S  Q  A  I  S  C  W  V  I  T  W  R  L  E  Y  L  I  L  D  *  P  L  *  W  S  Q  I  R  R  T  F  Q  L  W  *  L  E  L  L  D  I  W  L  L  :  N  I  L  T  P  E  K  Q  Q  S  K  E  M  F  T  A  L  E  L  S  Y  W  N  F  *  L  G  K  S  H  Q  M  K  H  F  W  R  K  E  P  D  L  *  L  G  *  A  C  S  S  P  F  F  F  F  I  L  A  A  F  E  L  S  L  I  R  S  V  D  T  V  L  L  Y  R  *  R  Q  L  F  </second_frame>
            <third_frame>   I  F  S  L  V  F  L  K  K  I  F  A  G  V  P  S  *  C  L  L  Q  E  N  E  H  F  L  Q  *  S  F  K  :  E  D  I  V  L  L  G  I  S  V  A  L  V  V  E  S  R  :  L  K  L  R  G  Q  K  S  K  V  I  E  Y  S   : E  L  N  G  K  F  *  K  Y  C  S  L  C  N  N  M  C  D  F  F  Y  H  L  E  D  Y  Y  D  N  R  L  L  P  *  M  E  E  K  A  N  G  C  S  R  Q  L  I  W :   W  K  T  S  D  V  *  V  T  E  N  E  H  V  E  V  Q  H  V  L  E  E  D  H  E  A  D  *  Q  R  Y  Y  R  I  R  R  L  W  N  S  L  *  T  D  N  *  R  I  N  F  F  R  G  K  E  V  K  Q  N  K  C  R  T  R  Q  R  F  *  K  R  V  G  G  N  G  G  H  K  A  S  K  Y  S  D  T  S  W  I  L  Q  Y  N  A  V  *  S  S  D  I  *  A  Y  D  *  W  K  F  R  *  S  T  S  W :   K  I  G  C  Q  E  G  F  G  L  A  Y  K  I  Q  N  S  S  R  S  S  K  R  I  I  I  S  T  S  R  L  H  P  S  H  H  P  Q  R  Y  K  V  K  Q  Y  L  V  G  S  *  H  G  G  S  S  I  *  F  W  T  S  H  S  D  G  A  R  *  D  A  R  F  N  F  G  S  W  N  F  W  I  F  G  S  * :   I  F  *  H  R  K  S  N  S  Q  R  R  C  L  Q  L  W  S  C  L  T  G  T  S  N  W  E  K  A  I  R  *  S  I  F  G  G  R  N  Q  T  C  N  L  G  K  L  V  V  H  L  F  S  F  L  S  *  L  L  S  S  C  H  *  F  G  Q  L  I  L  F  C  F  T  G  E  D  S  C  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74402" stop="74537"/>
                    <exon start="74617" stop="74955"/>
                    <exon start="75225" stop="75479"/>
                    <exon start="75556" stop="75701"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGNSKNIALYVTICVISFIISKIIMTIVCYRRWKRKQMVVQDSLSGGKLVMFKSPKMNTLKSNMFLKRTMKLTNKDIIGSGGYGTVYKLTINESISFAVKRLNRISAEQDRGFERELEAMGDIKHRNIVTLHGYYSTTQYNLLIYELMTNGSLDEALHGKSAARKVLDWPTRYKIAVGAARGLSYLHHDCIPHIIHRDIKSSNILLGHNMEARVSDFGLATLMEPDKTHVSTLVAGTFGYLAPEYFDTGKATVKGDVYSFGVVLLELLTGKKPSDEAFLEEGTRLVTWVSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="78760" PGL_stop="76241"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78760" e_stop="78566"/>
            <exon e_start="77140" e_stop="77039"/>
            <exon e_start="76904" e_stop="76749"/>
            <exon e_start="76657" e_stop="76443"/>
            <exon e_start="76308" e_stop="76241"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.461" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.806" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.877" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78760" e_stop="78566" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.461">
            <gDNA_intron_boundary i_start="78565" i_stop="77141" i_length="1425"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77140" e_stop="77039" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.967" acc_prob="0.806">
            <gDNA_intron_boundary i_start="77038" i_stop="76905" i_length="134"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76904" e_stop="76749" e_length="156"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.877">
            <gDNA_intron_boundary i_start="76748" i_stop="76658" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="76657" e_stop="76443" e_length="215"/>
          </exon>
          <intron i_serial="4" don_prob="0.920" acc_prob="0.921">
            <gDNA_intron_boundary i_start="76442" i_stop="76309" i_length="134"/>
          </intron>
          <exon e_serial="5" e_score="0.956">
            <gDNA_exon_boundary e_start="76308" e_stop="76241" e_length="68"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78760" stop="78566"/>
              <exon start="77140" stop="77039"/>
              <exon start="76904" stop="76749"/>
              <exon start="76657" stop="76443"/>
              <exon start="76308" stop="76241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78760" stop="78566"/>
              <exon start="77140" stop="77039"/>
              <exon start="76904" stop="76749"/>
              <exon start="76657" stop="76634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78743" stop="78566"/>
              <exon start="77140" stop="77039"/>
              <exon start="76904" stop="76749"/>
              <exon start="76657" stop="76443"/>
              <exon start="76308" stop="76280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322175" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78738" stop="78566"/>
              <exon start="77140" stop="77039"/>
              <exon start="76904" stop="76749"/>
              <exon start="76657" stop="76518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78664" stop="78566"/>
              <exon start="77140" stop="77039"/>
              <exon start="76904" stop="76749"/>
              <exon start="76657" stop="76577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306257" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATGGCAGCAGCTGGAGCCATTTCAGTATGGATTTCAACATCCACACCCACAAAGATCACTGCTTTTAACTCCATACCCAGAATTTGTTATCCTCTTAAACTTTCAAGAAATGGTATTTATCCCTTATCTACATTTGAGAGAAATGGCCAATACGAACAAAATCTCACAATCAAAGCTGCTGCCTCCTCTTCTG : TTGGAAGTGCAGAATACACAGAAGAACCAGCTACTAAGGTGAAATTTCAAAGATCATTGAGCTTACCTGGTTGCTCTACTTCCTTGTCATTGCTTGGAACTG : GATACAGGGAAAAGATTTTTGCAATTATTGGTGTCAAGGTCTATGCTGCAGGCCTCTATGTCAATGACTCCGTCTTTAGTAGCTTAGATGCCTGGCGAGGACGTTCTGCTGCAGATATTCAACAGGATCCTTCCTTGTTCAACAAGATCTTTGAAG : CGGATTTGGAGAAATCTTTACTTATTGTGCTGGTCAGAGATGTTGATGGTAAAACTTTCTGGGATGCCTTAGATGAAGCCATCTCTCCGAGAATCAAATCCCCTACTGCCGATGATAAGTCTGCTCTTTCTACATTCCGCGGTGTCTTTCAAGGGAAACCTCTTAAGAAAGAAACTTCCATATTCTTGACTTGGATTGACCCAAATAAAATGCTT : GTTTCACTCTCTTTTGATGGAATGCCTTCCTCGGTTGACGCAACTATTGAGTCACCAAATGTTGCATC</gDNA_template>
            <first_frame> K  W  Q  Q  L  E  P  F  Q  Y  G  F  Q  H  P  H  P  Q  R  S  L  L  L  T  P  Y  P  E  F  V  I  L  L  N  F  Q  E  M  V  F  I  P  Y  L  H  L  R  E  M  A  N  T  N  K  I  S  Q  S  K  L  L  P  P  L  L  :  L  E  V  Q  N  T  Q  K  N  Q  L  L  R  *  N  F  K  D  H  *  A  Y  L  V  A  L  L  P  C  H  C  L  E  L  :  D  T  G  K  R  F  L  Q  L  L  V  S  R  S  M  L  Q  A  S  M  S  M  T  P  S  L  V  A  *  M  P  G  E  D  V  L  L  Q  I  F  N  R  I  L  P  C  S  T  R  S  L  K  :  R  I  W  R  N  L  Y  L  L  C  W  S  E  M  L  M  V  K  L  S  G  M  P  *  M  K  P  S  L  R  E  S  N  P  L  L  P  M  I  S  L  L  F  L  H  S  A  V  S  F  K  G  N  L  L  R  K  K  L  P  Y  S  *  L  G  L  T  Q  I  K  C  L :   F  H  S  L  L  M  E  C  L  P  R  L  T  Q  L  L  S  H  Q  M  L  H  </first_frame>
            <second_frame>  N  G  S  S  W  S  H  F  S  M  D  F  N  I  H  T  H  K  D  H  C  F  *  L  H  T  Q  N  L  L  S  S  *  T  F  K  K  W  Y  L  S  L  I  Y  I  *  E  K  W  P  I  R  T  K  S  H  N  Q  S  C  C  L  L  F  C :   W  K  C  R  I  H  R  R  T  S  Y  *  G  E  I  S  K  I  I  E  L  T  W  L  L  Y  F  L  V  I  A  W  N  W :   I  Q  G  K  D  F  C  N  Y  W  C  Q  G  L  C  C  R  P  L  C  Q  *  L  R  L  *  *  L  R  C  L  A  R  T  F  C  C  R  Y  S  T  G  S  F  L  V  Q  Q  D  L  *  S :   G  F  G  E  I  F  T  Y  C  A  G  Q  R  C  *  W  *  N  F  L  G  C  L  R  *  S  H  L  S  E  N  Q  I  P  Y  C  R  *  *  V  C  S  F  Y  I  P  R  C  L  S  R  E  T  S  *  E  R  N  F  H  I  L  D  L  D  *  P  K  *  N  A   : C  F  T  L  F  *  W  N  A  F  L  G  *  R  N  Y  *  V  T  K  C  C  I </second_frame>
            <third_frame>   M  A  A  A  G  A  I  S  V  W  I  S  T  S  T  P  T  K  I  T  A  F  N  S  I  P  R  I  C  Y  P  L  K  L  S  R  N  G  I  Y  P  L  S  T  F  E  R  N  G  Q  Y  E  Q  N  L  T  I  K  A  A  A  S  S  S   : V  G  S  A  E  Y  T  E  E  P  A  T  K  V  K  F  Q  R  S  L  S  L  P  G  C  S  T  S  L  S  L  L  G  T   : G  Y  R  E  K  I  F  A  I  I  G  V  K  V  Y  A  A  G  L  Y  V  N  D  S  V  F  S  S  L  D  A  W  R  G  R  S  A  A  D  I  Q  Q  D  P  S  L  F  N  K  I  F  E   : A  D  L  E  K  S  L  L  I  V  L  V  R  D  V  D  G  K  T  F  W  D  A  L  D  E  A  I  S  P  R  I  K  S  P  T  A  D  D  K  S  A  L  S  T  F  R  G  V  F  Q  G  K  P  L  K  K  E  T  S  I  F  L  T  W  I  D  P  N  K  M  L  :  V  S  L  S  F  D  G  M  P  S  S  V  D  A  T  I  E  S  P  N  V  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78758" stop="78566"/>
                    <exon start="77140" stop="77039"/>
                    <exon start="76904" stop="76749"/>
                    <exon start="76657" stop="76443"/>
                    <exon start="76308" stop="76243"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAAAGAISVWISTSTPTKITAFNSIPRICYPLKLSRNGIYPLSTFERNGQYEQNLTIKAAASSSVGSAEYTEEPATKVKFQRSLSLPGCSTSLSLLGTGYREKIFAIIGVKVYAAGLYVNDSVFSSLDAWRGRSAADIQQDPSLFNKIFEADLEKSLLIVLVRDVDGKTFWDALDEAISPRIKSPTADDKSALSTFRGVFQGKPLKKETSIFLTWIDPNKMLVSLSFDGMPSSVDATIESPNVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="91737" PGL_stop="96325"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91737" e_stop="92181"/>
            <exon e_start="92284" e_stop="92393"/>
            <exon e_start="93537" e_stop="93664"/>
            <exon e_start="93753" e_stop="93856"/>
            <exon e_start="95178" e_stop="95305"/>
            <exon e_start="95405" e_stop="96325"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.935" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.946" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="91737" e_stop="92181" e_length="445"/>
          </exon>
          <intron i_serial="1" don_prob="0.935" acc_prob="1.000">
            <gDNA_intron_boundary i_start="92182" i_stop="92283" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92284" e_stop="92393" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.946" acc_prob="0.995">
            <gDNA_intron_boundary i_start="92394" i_stop="93536" i_length="1143"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="93537" e_stop="93664" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.882" acc_prob="0.761">
            <gDNA_intron_boundary i_start="93665" i_stop="93752" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="93753" e_stop="93856" e_length="104"/>
          </exon>
          <intron i_serial="4" don_prob="0.972" acc_prob="0.892">
            <gDNA_intron_boundary i_start="93857" i_stop="95177" i_length="1321"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="95178" e_stop="95305" e_length="128"/>
          </exon>
          <intron i_serial="5" don_prob="0.974" acc_prob="0.999">
            <gDNA_intron_boundary i_start="95306" i_stop="95404" i_length="99"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="95405" e_stop="96325" e_length="921"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91737" stop="92181"/>
              <exon start="92284" stop="92393"/>
              <exon start="93537" stop="93664"/>
              <exon start="93753" stop="93826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91740" stop="92071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91867" stop="92181"/>
              <exon start="92284" stop="92393"/>
              <exon start="93537" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91867" stop="92181"/>
              <exon start="92284" stop="92373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91901" stop="92181"/>
              <exon start="92284" stop="92370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91915" stop="92181"/>
              <exon start="92284" stop="92345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91938" stop="92181"/>
              <exon start="92284" stop="92393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203544" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92075" stop="92181"/>
              <exon start="92284" stop="92393"/>
              <exon start="93537" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92297" stop="92393"/>
              <exon start="93537" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92299" stop="92393"/>
              <exon start="93537" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93599" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93603" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256893" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93605" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259627" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93607" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93630" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="96112"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93633" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93649" stop="93664"/>
              <exon start="93753" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93786" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371151" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93786" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93786" stop="93856"/>
              <exon start="95178" stop="95305"/>
              <exon start="95405" stop="95776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95229" stop="95305"/>
              <exon start="95405" stop="96211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705525" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95285" stop="95305"/>
              <exon start="95405" stop="96172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95405" stop="95897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467263" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95469" stop="96260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95472" stop="96116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95472" stop="95970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95592" stop="96283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95603" stop="96200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95613" stop="96251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414950" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95631" stop="96325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95646" stop="96325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95737" stop="96260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95751" stop="96251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474799" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95834" stop="96251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611891" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95852" stop="96325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314651" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTAGGAGTTGAAACACAGCCCAACTGTCTTTTTCTTCCATTTTCTGTCACTTAATCAGACCAAAGACTCCATTTTTTATGTGGTTCTTTTTTATCCACTCAATTATTTCTTCTTGGGACAGGATATAAAAGCACACCCAAGTGTTCAAATTGTTTCCATAGTAGTTTTCTGTTCTTTTTTGCCTATTGGGGTGTCGAAAAAAGCAATCTTGAAGCATTGCAAGGCAAAAAATTTGGTGATTTAGCTAAGTGGGTGTTACAAAGATGATGTCTGTGACTTGCCATAATCTTGAAATTGGGAGAACCCCATTGGAGTCTTTGGCTTGTGGCTGTTCTTTTTCAAAGGGTGTTTTGAGAAATGTAAGTAGAAGATTCAGTGGGAAGAAGTTGTTGTCTTGCAGACAAGAATTTGGGCGTATTTCAACTAAGGCTTCACTTACTG : GGTTGGCACCAGTTTTGGATTTGAATAAGTCAGAAAAACCTATTTCATTGACTAATGTTTTTGAAGTGGTTGCGGATGACCTACTTACGTTAAACAAGAACTTGCATAAT : ATTGTTGGTGCAGAGAACCCAGTTTTAATGTCTGCAGCTGAGCAGATTTTTGGTGCTGGTGGCAAAAGGGTGAGACCTGCTTTAGTGTTCCTAGTGTCAAGGGCCACAGCAGAAATGTCTGGCTTAAA : GGAACTCACCACAAATCACAGAAGGTTAGCTGAAATCATTGAAATGATCCATACTGCAAGCTTGATACATGATGACGTGTTAGATGAAAGTGACACACGAAGAG : GAAAGGAGACTATTCACCAATTATATGGTACTAGAGTGGCAGTACTGGCTGGTGATTTTATGTTTGCACAGTCGTCCTGGTACCTAGCTAACCTTGAAAACCTTGAAGTCATAAAGCTCATCAGTCAG : GTTATTAAAGACTTTGCAAGTGGTGAAATAAAGCAGGCCTCTAACTTGTTCGACTGTGATGTTGGACTGGATGAATATTTGCTCAAGAGTTACTATAAAACGGCCTCCTTGATTGCTGCAAGCACCAAAGGAGCTGCCATTTTCAGTGAAGTTGGCAGTGATATTAGTGAACAAATGTTTCAATATGGGAGGAATCTTGGTTTATCGTTCCAGATTGTTGATGACATATTGGACTTCACACAATCAGCCGCACAACTGGGAAAGCCAGCTGGAAGTGACTTAGCCAAGGGAAACCTTACTGCACCAGTACTTTTTGCATTAGAGAAAGAGCCAAACCTTAGGAATATAATCGAATCAGAATTTCACGATGCTGGTTCTCTCGAGGAGGCCATCAATCTGGTGAAAAGCTGTGGGGGAATTCAACGAGCACAAGATTTGGCAAAGGAGAAAGCTGATTTAGCAATGCAGAACCTAAAATGCCTTCCATCTAGTCCTTTTCAAGCAGCACTTGAGGAAATCGTGAAGTATAATCTGGAGAGAATTGAATAGACGAAAACAAAGGACGAAACTATACAACTTTGGTTTATTATTCTCTGAAAGCTCTTCATATCTAACAATATCTGGAGCACAGAGTAGAAGCTATTACTATAGTTTGAATGGCAACAACGATCAGAACGAAAGTGCTTCACTATGTTCATATATTATACCCATACAGGTTGTAATTTTCAGTTCCTAATACAGCAATATGGTGTTCCAGCATTCTTTATAATTTGGCTAATAAATTGTCAAATTTCAACTGTTGTTGTACACTAAAGAAATTTCACATTACAAATAATGTCATGTATTAGTATTTACTATTGGCTTTCTTGGATGAACATATATGTTATAAATTGATAATACAATAAACATATTACACCTTAA</gDNA_template>
            <first_frame> N  F  R  S  *  N  T  A  Q  L  S  F  S  S  I  F  C  H  L  I  R  P  K  T  P  F  F  M  W  F  F  F  I  H  S  I  I  S  S  W  D  R  I  *  K  H  T  Q  V  F  K  L  F  P  *  *  F  S  V  L  F  C  L  L  G  C  R  K  K  Q  S  *  S  I  A  R  Q  K  I  W  *  F  S  *  V  G  V  T  K  M  M  S  V  T  C  H  N  L  E  I  G  R  T  P  L  E  S  L  A  C  G  C  S  F  S  K  G  V  L  R  N  V  S  R  R  F  S  G  K  K  L  L  S  C  R  Q  E  F  G  R  I  S  T  K  A  S  L  T   : G  L  A  P  V  L  D  L  N  K  S  E  K  P  I  S  L  T  N  V  F  E  V  V  A  D  D  L  L  T  L  N  K  N  L  H  N  :  I  V  G  A  E  N  P  V  L  M  S  A  A  E  Q  I  F  G  A  G  G  K  R  V  R  P  A  L  V  F  L  V  S  R  A  T  A  E  M  S  G  L  K :   E  L  T  T  N  H  R  R  L  A  E  I  I  E  M  I  H  T  A  S  L  I  H  D  D  V  L  D  E  S  D  T  R  R   : G  K  E  T  I  H  Q  L  Y  G  T  R  V  A  V  L  A  G  D  F  M  F  A  Q  S  S  W  Y  L  A  N  L  E  N  L  E  V  I  K  L  I  S  Q  :  V  I  K  D  F  A  S  G  E  I  K  Q  A  S  N  L  F  D  C  D  V  G  L  D  E  Y  L  L  K  S  Y  Y  K  T  A  S  L  I  A  A  S  T  K  G  A  A  I  F  S  E  V  G  S  D  I  S  E  Q  M  F  Q  Y  G  R  N  L  G  L  S  F  Q  I  V  D  D  I  L  D  F  T  Q  S  A  A  Q  L  G  K  P  A  G  S  D  L  A  K  G  N  L  T  A  P  V  L  F  A  L  E  K  E  P  N  L  R  N  I  I  E  S  E  F  H  D  A  G  S  L  E  E  A  I  N  L  V  K  S  C  G  G  I  Q  R  A  Q  D  L  A  K  E  K  A  D  L  A  M  Q  N  L  K  C  L  P  S  S  P  F  Q  A  A  L  E  E  I  V  K  Y  N  L  E  R  I  E  *  T  K  T  K  D  E  T  I  Q  L  W  F  I  I  L  *  K  L  F  I  S  N  N  I  W  S  T  E  *  K  L  L  L  *  F  E  W  Q  Q  R  S  E  R  K  C  F  T  M  F  I  Y  Y  T  H  T  G  C  N  F  Q  F  L  I  Q  Q  Y  G  V  P  A  F  F  I  I  W  L  I  N  C  Q  I  S  T  V  V  V  H  *  R  N  F  T  L  Q  I  M  S  C  I  S  I  Y  Y  W  L  S  W  M  N  I  Y  V  I  N  *  *  Y  N  K  H  I  T  P  * </first_frame>
            <second_frame>  I  L  G  V  E  T  Q  P  N  C  L  F  L  P  F  S  V  T  *  S  D  Q  R  L  H  F  L  C  G  S  F  L  S  T  Q  L  F  L  L  G  T  G  Y  K  S  T  P  K  C  S  N  C  F  H  S  S  F  L  F  F  F  A  Y  W  G  V  E  K  S  N  L  E  A  L  Q  G  K  K  F  G  D  L  A  K  W  V  L  Q  R  *  C  L  *  L  A  I  I  L  K  L  G  E  P  H  W  S  L  W  L  V  A  V  L  F  Q  R  V  F  *  E  M  *  V  E  D  S  V  G  R  S  C  C  L  A  D  K  N  L  G  V  F  Q  L  R  L  H  L  L  :  G  W  H  Q  F  W  I  *  I  S  Q  K  N  L  F  H  *  L  M  F  L  K  W  L  R  M  T  Y  L  R  *  T  R  T  C  I  I :   L  L  V  Q  R  T  Q  F  *  C  L  Q  L  S  R  F  L  V  L  V  A  K  G  *  D  L  L  *  C  S  *  C  Q  G  P  Q  Q  K  C  L  A  *   : R  N  S  P  Q  I  T  E  G  *  L  K  S  L  K  *  S  I  L  Q  A  *  Y  M  M  T  C  *  M  K  V  T  H  E  E  :  E  R  R  L  F  T  N  Y  M  V  L  E  W  Q  Y  W  L  V  I  L  C  L  H  S  R  P  G  T  *  L  T  L  K  T  L  K  S  *  S  S  S  V  R :   L  L  K  T  L  Q  V  V  K  *  S  R  P  L  T  C  S  T  V  M  L  D  W  M  N  I  C  S  R  V  T  I  K  R  P  P  *  L  L  Q  A  P  K  E  L  P  F  S  V  K  L  A  V  I  L  V  N  K  C  F  N  M  G  G  I  L  V  Y  R  S  R  L  L  M  T  Y  W  T  S  H  N  Q  P  H  N  W  E  S  Q  L  E  V  T  *  P  R  E  T  L  L  H  Q  Y  F  L  H  *  R  K  S  Q  T  L  G  I  *  S  N  Q  N  F  T  M  L  V  L  S  R  R  P  S  I  W  *  K  A  V  G  E  F  N  E  H  K  I  W  Q  R  R  K  L  I  *  Q  C  R  T  *  N  A  F  H  L  V  L  F  K  Q  H  L  R  K  S  *  S  I  I  W  R  E  L  N  R  R  K  Q  R  T  K  L  Y  N  F  G  L  L  F  S  E  S  S  S  Y  L  T  I  S  G  A  Q  S  R  S  Y  Y  Y  S  L  N  G  N  N  D  Q  N  E  S  A  S  L  C  S  Y  I  I  P  I  Q  V  V  I  F  S  S  *  Y  S  N  M  V  F  Q  H  S  L  *  F  G  *  *  I  V  K  F  Q  L  L  L  Y  T  K  E  I  S  H  Y  K  *  C  H  V  L  V  F  T  I  G  F  L  G  *  T  Y  M  L  *  I  D  N  T  I  N  I  L  H  L   </second_frame>
            <third_frame>   F  *  E  L  K  H  S  P  T  V  F  F  F  H  F  L  S  L  N  Q  T  K  D  S  I  F  Y  V  V  L  F  Y  P  L  N  Y  F  F  L  G  Q  D  I  K  A  H  P  S  V  Q  I  V  S  I  V  V  F  C  S  F  L  P  I  G  V  S  K  K  A  I  L  K  H  C  K  A  K  N  L  V  I  *  L  S  G  C  Y  K  D  D  V  C  D  L  P  *  S  *  N  W  E  N  P  I  G  V  F  G  L  W  L  F  F  F  K  G  C  F  E  K  C  K  *  K  I  Q  W  E  E  V  V  V  L  Q  T  R  I  W  A  Y  F  N  *  G  F  T  Y  W :   V  G  T  S  F  G  F  E  *  V  R  K  T  Y  F  I  D  *  C  F  *  S  G  C  G  *  P  T  Y  V  K  Q  E  L  A  *   : Y  C  W  C  R  E  P  S  F  N  V  C  S  *  A  D  F  W  C  W  W  Q  K  G  E  T  C  F  S  V  P  S  V  K  G  H  S  R  N  V  W  L  K  :  G  T  H  H  K  S  Q  K  V  S  *  N  H  *  N  D  P  Y  C  K  L  D  T  *  *  R  V  R  *  K  *  H  T  K  R :   K  G  D  Y  S  P  I  I  W  Y  *  S  G  S  T  G  W  *  F  Y  V  C  T  V  V  L  V  P  S  *  P  *  K  P  *  S  H  K  A  H  Q  S   : G  Y  *  R  L  C  K  W  *  N  K  A  G  L  *  L  V  R  L  *  C  W  T  G  *  I  F  A  Q  E  L  L  *  N  G  L  L  D  C  C  K  H  Q  R  S  C  H  F  Q  *  S  W  Q  *  Y  *  *  T  N  V  S  I  W  E  E  S  W  F  I  V  P  D  C  *  *  H  I  G  L  H  T  I  S  R  T  T  G  K  A  S  W  K  *  L  S  Q  G  K  P  Y  C  T  S  T  F  C  I  R  E  R  A  K  P  *  E  Y  N  R  I  R  I  S  R  C  W  F  S  R  G  G  H  Q  S  G  E  K  L  W  G  N  S  T  S  T  R  F  G  K  G  E  S  *  F  S  N  A  E  P  K  M  P  S  I  *  S  F  S  S  S  T  *  G  N  R  E  V  *  S  G  E  N  *  I  D  E  N  K  G  R  N  Y  T  T  L  V  Y  Y  S  L  K  A  L  H  I  *  Q  Y  L  E  H  R  V  E  A  I  T  I  V  *  M  A  T  T  I  R  T  K  V  L  H  Y  V  H  I  L  Y  P  Y  R  L  *  F  S  V  P  N  T  A  I  W  C  S  S  I  L  Y  N  L  A  N  K  L  S  N  F  N  C  C  C  T  L  K  K  F  H  I  T  N  N  V  M  Y  *  Y  L  L  L  A  F  L  D  E  H  I  C  Y  K  L  I  I  Q  *  T  Y  Y  T  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91989" stop="92181"/>
                    <exon start="92284" stop="92393"/>
                    <exon start="93537" stop="93664"/>
                    <exon start="93753" stop="93856"/>
                    <exon start="95178" stop="95305"/>
                    <exon start="95405" stop="95953"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1209</number_coding_nucleotides>
                  <number_encoded_amino_acids>403</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGVTKMMSVTCHNLEIGRTPLESLACGCSFSKGVLRNVSRRFSGKKLLSCRQEFGRISTKASLTGLAPVLDLNKSEKPISLTNVFEVVADDLLTLNKNLHNIVGAENPVLMSAAEQIFGAGGKRVRPALVFLVSRATAEMSGLKELTTNHRRLAEIIEMIHTASLIHDDVLDESDTRRGKETIHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASNLFDCDVGLDEYLLKSYYKTASLIAASTKGAAIFSEVGSDISEQMFQYGRNLGLSFQIVDDILDFTQSAAQLGKPAGSDLAKGNLTAPVLFALEKEPNLRNIIESEFHDAGSLEEAINLVKSCGGIQRAQDLAKEKADLAMQNLKCLPSSPFQAALEEIVKYNLERIE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91745" stop="91984"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELKHSPTVFFFHFLSLNQTKDSIFYVVLFYPLNYFFLGQDIKAHPSVQIVSIVVFCSFLPIGVSKKAILKHCKAKNLVI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95928" stop="96140"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIIWRELNRRKQRTKLYNFGLLFSESSSYLTISGAQSRSYYYSLNGNNDQNESASLCSYIIPIQVVIFSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="96274" PGL_stop="95709"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96274" e_stop="95709"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="96274" e_stop="95709" e_length="566"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96274" stop="95709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413991" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAAGAAAGCCAATAGTAAATACTAATACATGACATTATTTGTAATGTGAAATTTCTTTAGTGTACAACAACAGTTGAAATTTGACAATTTATTAGCCAAATTATAAAGAATGCTGGAACACCATATTGCTGTATTAGGAACTGAAAATTACAACCTGTATGGGTATAATATATGAACATAGTGAAGCACTTTCGTTCTGATCGTTGTTGCCATTCAAACTATAGTAATAGCTTCTACTCTGTGCTCCAGATATTGTTAGATATGAAGAGCTTTCAGAGAATAATAAACCAAAGTTGTATAGTTTCGTCCTTTGTTTTCGTCTATTCAATTCTCTCCAGATTATACTTCACGATTTCCTCAAGTGCTGCTTGAAAAGGACTAGATGGAAGGCATTTTAGGTTCTGCATTGCTAAATCAGCTTTCTCCTTTGCCAAATCTTGTGCTCGTTGAATTCCCCCACAGCTTTTCACCAGATTGATGGCCTCCTCGAGAGAACCAGCATCGTGAAATTCTGATTCGATTATATTCCTAAGGTTTGGCTCTTTCTCTAATGCAAAAAGTACTG</gDNA_template>
            <first_frame> P  R  K  P  I  V  N  T  N  T  *  H  Y  L  *  C  E  I  S  L  V  Y  N  N  S  *  N  L  T  I  Y  *  P  N  Y  K  E  C  W  N  T  I  L  L  Y  *  E  L  K  I  T  T  C  M  G  I  I  Y  E  H  S  E  A  L  S  F  *  S  L  L  P  F  K  L  *  *  *  L  L  L  C  A  P  D  I  V  R  Y  E  E  L  S  E  N  N  K  P  K  L  Y  S  F  V  L  C  F  R  L  F  N  S  L  Q  I  I  L  H  D  F  L  K  C  C  L  K  R  T  R  W  K  A  F  *  V  L  H  C  *  I  S  F  L  L  C  Q  I  L  C  S  L  N  S  P  T  A  F  H  Q  I  D  G  L  L  E  R  T  S  I  V  K  F  *  F  D  Y  I  P  K  V  W  L  F  L  *  C  K  K  Y   </first_frame>
            <second_frame>  Q  E  S  Q  *  *  I  L  I  H  D  I  I  C  N  V  K  F  L  *  C  T  T  T  V  E  I  *  Q  F  I  S  Q  I  I  K  N  A  G  T  P  Y  C  C  I  R  N  *  K  L  Q  P  V  W  V  *  Y  M  N  I  V  K  H  F  R  S  D  R  C  C  H  S  N  Y  S  N  S  F  Y  S  V  L  Q  I  L  L  D  M  K  S  F  Q  R  I  I  N  Q  S  C  I  V  S  S  F  V  F  V  Y  S  I  L  S  R  L  Y  F  T  I  S  S  S  A  A  *  K  G  L  D  G  R  H  F  R  F  C  I  A  K  S  A  F  S  F  A  K  S  C  A  R  *  I  P  P  Q  L  F  T  R  L  M  A  S  S  R  E  P  A  S  *  N  S  D  S  I  I  F  L  R  F  G  S  F  S  N  A  K  S  T  </second_frame>
            <third_frame>   K  K  A  N  S  K  Y  *  Y  M  T  L  F  V  M  *  N  F  F  S  V  Q  Q  Q  L  K  F  D  N  L  L  A  K  L  *  R  M  L  E  H  H  I  A  V  L  G  T  E  N  Y  N  L  Y  G  Y  N  I  *  T  *  *  S  T  F  V  L  I  V  V  A  I  Q  T  I  V  I  A  S  T  L  C  S  R  Y  C  *  I  *  R  A  F  R  E  *  *  T  K  V  V  *  F  R  P  L  F  S  S  I  Q  F  S  P  D  Y  T  S  R  F  P  Q  V  L  L  E  K  D  *  M  E  G  I  L  G  S  A  L  L  N  Q  L  S  P  L  P  N  L  V  L  V  E  F  P  H  S  F  S  P  D  *  W  P  P  R  E  N  Q  H  R  E  I  L  I  R  L  Y  S  *  G  L  A  L  S  L  M  Q  K  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0102J11.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96105" stop="95902"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YMNIVKHFRSDRCCHSNYSNSFYSVLQILLDMKSFQRIINQSCIVSSFVFVYSILSRLYFTISSSAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 258 chains have been computed
$ 
$ memory statistics:
$ 370544 bytes spliced alignments in total
$ 172 spliced alignments have been stored
$ 2154 bytes was the average size of a spliced alignment
$ 32352 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1702 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 289 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 23:56:57
-->
