<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-17 02:34:55"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577849" ref_strand="+" ref_description="SGN-E577849 [LE08AD09]">
      <seq>cgaaaatggaggcttgtagacgatttcttcttcatcatcctcctcagtcacttcacggtcggggccactgttatctgctcccagatcatgggcgaggtattttccgccctttgggtcgctatgggtcgccaattcctcgtcgagcgccgcgtttctgtccaacaacacagcagtctcgatatctatcttcgcctctctcgcctttccttcgtgtatctctaaacgaagcaagttcaaccttttccttaggctttcggtttccatctcaacctccttctttctctttatctgtgacgccagatcttcatccaatgttgtgaccgcagctttgtagatcgccgtggtcgcgtctactttgagtccttcttccttaaccttctgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="16629" stop="15644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16329" g_stop="15944" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E577849" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16329" e_stop="15944"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGCCAGGGCCACTGTTATCTGCTCCCCGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGTGCTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTTAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCCTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAAATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</genome_strand>
        <mrna_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGTCGGGGCCACTGTTATCTGCTCCCAGATCATGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGCGTTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCTAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243204" ref_strand="+" ref_description="SGN-E243204 [cLEE-2-O19]">
      <seq>aggctggttctgagttggatctatgtttgatgaagggaagtagaccggaggtcttgcatcagcaatattagtaccaaatccaggtggaggcgcatcctgtctccgttgcatttcaactttcatttcagcaatctgttgcatcagttgcatgatcaattcattctgttccactacagtgggctgagcgaccacaacgtcagtaagacgcccttcgtcattgttgtctcccataactgtttttcctttatctgaatttgatcgagggaaggaatctgtaggacctttcgatctggtgaagtaaggatgatctgccagctttattgacacagatcagtaaaaaggtacctgaaaggtaaaaacaactcaaaggcaaatttgttagtgcatatccagagtacaaaatgcttaatatcgcacataaaaccgataaacacacaagtcgttttgtttgaggatatcttaacccacgaataaggacggatatatattttgaacaaacaggaatttgtttgtttggcgttatcttgggaaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="17467" stop="16332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17167" g_stop="16632" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E243204" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17167" e_stop="16632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACCACAGTGGGCTGAGCCACCACAACGTCCGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAACTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGCAAAAAGGTACCTGAGAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAGCACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</genome_strand>
        <mrna_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAATATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGTTGCATGATCAATTCATTCTGTTCCACTACAGTGGGCTGAGCGACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTATCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGTAAAAAGGTACCTGAAAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCTTAATATCGCACATAAAACCGATAAACACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGTTATCTTGGGAAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355122" ref_strand="+" ref_description="SGN-E355122 [cTOS-18-H18]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtatttttcctcatcaagatgagtacaaaggaaagttcgcaccaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="23053" stop="24348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23313" g_stop="24048" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E355122" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23313" e_stop="24048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTATGATTATCCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAGAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTCCAAAGGGAAGTTCGCACCAAACTG</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGATGAGTACAAAGGAAAGTTCGCACCAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350936" ref_strand="+" ref_description="SGN-E350936 [cTOS-7-D2]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcancaaagagtaagagccagaattttgaaagtggccagttggttcttaagcgtatttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="23053" stop="24308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23313" g_stop="24008" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="695" r_length="695" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E350936" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23313" e_stop="24008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTATGATTATCCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAGAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTC</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCANCAAAGAGTAAGAGCCAG-AATTTTGAAAGTGGCCAGTTGGTTCTTAAGCGTATTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353644" ref_strand="+" ref_description="SGN-E353644 [cTOS-10-I24]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="23053" stop="24307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23313" g_stop="24007" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E353644" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23313" e_stop="24007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTATGATTATCCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAGAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTT</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E616846" ref_strand="+" ref_description="SGN-E616846 [90317]">
      <seq>ctagggaactaagtttaccagctggagtgatgctcttattgccaataattttattgcatcatgacaagggaaatatggggcgaagatgcaacagagttcaagccagagagattagtgaaggcgtttcanaggcaacaagggtcaatgacgttttcccatttggcggaggacctcggatctgtattgggctaaacttcgcgatgatagaagcaaagatggctttggctatgattctacaacacttctcctttgagctatctccttcttatacacacgctccgcagtctgtaataactattcaaccccagtatggtgctcctcttatattgcatagattgtaagctatagcataattaagttgtaatattttgcagctttggtctttacttttgttcgataataagtctacattatcaataagtacatgtaatttgtttaggttgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="43362" stop="42333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43062" g_stop="42624" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="435" r_length="435" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="444" polyA_stop="457"/>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E616846" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43062" e_stop="42624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGGGGAACTAAGTTTACCAGCTGGAGTGATGCTCGTATTGCCAATAATTTTATTGCATCACGACAA-GGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGATTTAGTGAAGGCGTTTCAAAGGCAACAAAGGGTCAAATGACGTTTTTCCCATTTGGCGGGGGACCTAGGATATGCATTGGGCTAAACTTCACGATGATAGAAGCGAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAACTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAATATGGTGCTCCTCTTATATTGCATAAATTGTAAGCT--AGCATTATTAAGTTGAAGCATTTTGCATCTTTGGTCTTTACTTTTGTTCGATAGCAAGTCTACATCATCAATAAGTACATATGTAATTTGT</genome_strand>
        <mrna_strand>CTAGG-GAACTAAGTTTACCAGCTGGAGTGATGCTCTTATTGCCAATAATTTTATTGCATCATGACAAGGGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGA-TTAGTGAAGGCGTTTCANAGGCAAC-AAGGGTC-AATGACG-TTTTCCCATTTGGCGGAGGACCTCGGATCTGTATTGGGCTAAACTTCGCGATGATAGAAGCAAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAGCTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAGTATGGTGCTCCTCTTATATTGCATAGATTGTAAGCTATAGCATAATTAAGTTGTAATATTTTGCAGCTTTGGTCTTTACTTTTGTTCGATAATAAGTCTACATTATCAATAAGTAC--ATGTAATTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401995" ref_strand="-" ref_description="SGN-E401995 [PPC-5-P8]">
      <seq>cctcacgctagagaagaggttttgcaagttttcggtgatggcaaactagaatttgatggattaaaccgcttaaaaattgtgacaatgattttgaacgagacgttaaggctatatccaccagttgatgcaactagtcgaaaaactacaaccaataccaagctaggggaactaagtttaccagctggagtgatgctcttattgccaataattttattgcatcatgacaaggaaatatggggcgaagatgcaacagagttcaagccagagagatttagtgaaggcgtttcaaaggcaacaaagggtcaaatgacgtttttcccatttggcggaggacctcggatctgtattgggctaaacttcgcgatgatagaagcaaagatggctttggctatgattctacaacacttctcctttgagctatctccttcttatacacacgctccgcagtctgtaataactattcaaccccagtatggtgctcctcttatattgcatagattgtaagctatagcataattaagttgtaatattttgcagctttggtctttacttttgttcgataataagtctacattatcaataaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="43601" stop="42334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43302" g_stop="43225" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43224" i_stop="43144" i_length="81">
            <donor d_prob="0.991" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43143" g_stop="42641" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="583" r_length="505" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="584" polyA_stop="603"/>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E401995" ref_strand="-">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401995" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="43302" e_stop="43225"/>
          <exon e_start="43143" e_stop="42641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCGCGCTAGAGAAGAGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGATTAAACCGCCTAAAAATTGTAAGTCTATTACCTTCTTTGACACACACATAGTTTATTGTTCTATGTTGAATTAATATTGATCAACTCTTTTTATTATAGGTGACAATGATTTTGAACGAGTCGTTAAGGCTATATCCACCAGCTGATTCACTTAATCGAAAGACTACAACCAATACCAAGCTAGGGGAACTAAGTTTACCAGCTGGAGTGATGCTCGTATTGCCAATAATTTTATTGCATCACGACAAGGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGATTTAGTGAAGGCGTTTCAAAGGCAACAAAGGGTCAAATGACGTTTTTCCCATTTGGCGGGGGACCTAGGATATGCATTGGGCTAAACTTCACGATGATAGAAGCGAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAACTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAATATGGTGCTCCTCTTATATTGCATAAATTGTAAGC--TAGCATTATTAAGTTGAAGCATTTTGCATCTTTGGTCTTTACTTTTGTTCGATAGCAAGTCTACATCATCAATAA</genome_strand>
        <mrna_strand>CCTCACGCTAGAGAAGAGGTTTTGCAAGTTTTCGGTGATGGCAAACTAGAATTTGATGGATTAAACCGCTTAAAAATT.................................................................................GTGACAATGATTTTGAACGAGACGTTAAGGCTATATCCACCAGTTGATGCAACTAGTCGAAAAACTACAACCAATACCAAGCTAGGGGAACTAAGTTTACCAGCTGGAGTGATGCTCTTATTGCCAATAATTTTATTGCATCATGACAAGGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGATTTAGTGAAGGCGTTTCAAAGGCAACAAAGGGTCAAATGACGTTTTTCCCATTTGGCGGAGGACCTCGGATCTGTATTGGGCTAAACTTCGCGATGATAGAAGCAAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAGCTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAGTATGGTGCTCCTCTTATATTGCATAGATTGTAAGCTATAGCATAATTAAGTTGTAATATTTTGCAGCTTTGGTCTTTACTTTTGTTCGATAATAAGTCTACATTATCAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432693" ref_strand="-" ref_description="SGN-E432693 [STM-57-M12]">
      <seq>agataaaagaatctgtctaattgtcctcacgctagagaagaggttttgcaagttttcggtgatggcaaactagaatttgatggattaaaccgcttaaaaattgtgacaatgattttgaacgagacgttaaggctatatccaccagttgatgcaactagtcgaaaaactacaaccaataccaagctaggggaactaagtttaccagctggagtgatgctcttattgccaataattttattgcatcatgacaaggaaatatggggcgaagatgcaacagagttcaagccagagagatttagtgaaggcgtttcaaaggcaacaaagggtcaaatgacgtttttcccatttggcggaggacctcggatctgtattgggctaaacttcgcgatgatagaagcaaagatggctttggctatgattctacaacacttctcctttgagctatctccttcttatacacacgctccgcagtctgtaataactattcaaccccagtatggtgctcctcttatattgcatagattgtaagctatagcataattaagttgtaatattttgcagctttggtctttacttttgttcgataataagtctacattatcaataaaaaaaaaaaaaaaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="43601" stop="42334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43300" g_stop="43225" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="102" r_length="76" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43224" i_stop="43144" i_length="81">
            <donor d_prob="0.991" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43143" g_stop="42641" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="607" r_length="505" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="608" polyA_stop="627"/>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E432693" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E432693" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="43300" e_stop="43225"/>
          <exon e_start="43143" e_stop="42641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGCTAGAGAAGAGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGATTAAACCGCCTAAAAATTGTAAGTCTATTACCTTCTTTGACACACACATAGTTTATTGTTCTATGTTGAATTAATATTGATCAACTCTTTTTATTATAGGTGACAATGATTTTGAACGAGTCGTTAAGGCTATATCCACCAGCTGATTCACTTAATCGAAAGACTACAACCAATACCAAGCTAGGGGAACTAAGTTTACCAGCTGGAGTGATGCTCGTATTGCCAATAATTTTATTGCATCACGACAAGGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGATTTAGTGAAGGCGTTTCAAAGGCAACAAAGGGTCAAATGACGTTTTTCCCATTTGGCGGGGGACCTAGGATATGCATTGGGCTAAACTTCACGATGATAGAAGCGAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAACTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAATATGGTGCTCCTCTTATATTGCATAAATTGTAAGC--TAGCATTATTAAGTTGAAGCATTTTGCATCTTTGGTCTTTACTTTTGTTCGATAGCAAGTCTACATCATCAATAA</genome_strand>
        <mrna_strand>TCACGCTAGAGAAGAGGTTTTGCAAGTTTTCGGTGATGGCAAACTAGAATTTGATGGATTAAACCGCTTAAAAATT.................................................................................GTGACAATGATTTTGAACGAGACGTTAAGGCTATATCCACCAGTTGATGCAACTAGTCGAAAAACTACAACCAATACCAAGCTAGGGGAACTAAGTTTACCAGCTGGAGTGATGCTCTTATTGCCAATAATTTTATTGCATCATGACAAGGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGATTTAGTGAAGGCGTTTCAAAGGCAACAAAGGGTCAAATGACGTTTTTCCCATTTGGCGGAGGACCTCGGATCTGTATTGGGCTAAACTTCGCGATGATAGAAGCAAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAGCTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAGTATGGTGCTCCTCTTATATTGCATAGATTGTAAGCTATAGCATAATTAAGTTGTAATATTTTGCAGCTTTGGTCTTTACTTTTGTTCGATAATAAGTCTACATTATCAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214821" ref_strand="+" ref_description="SGN-E214821 [cLEC-79-L2]">
      <seq>gaatatggttccagcaattcatttgagctgcactgaaatggtgagccaatgggaggagtcaatctcaacgaaaggaacatcttgtgaaatcgatatatggccttaccttcaaaaattgtctagtgatgtgatttctcgaacagcctttggaagcaactatgaagaaggtcgaatgatatttgagcttcaaaaagaacaagctcagcatttcattgaagctactcgtaccttgtatattctaggatcgaggtttttgccaactaagaaaaatcgaaggatgaaggagatcgataaaaacgttcaagcaatgattagaggaataattgataaaagagtgaaggcattgaaagcaggggaggccaatactgatgacttattagggatgttgttggaatccaactttaaacaaattgaacaacatggcaacaaggattttggtatgagtacgcgagagatcatcgaggagtgtaaattgttctattttgctggacaagaaaccacctctgtattgcttgtatggactatgattttgttgagtagacatctagattggcaaactcgcgctagagaaaggttttgcaagtcttcggtgatagcaaactagaatttgatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="44362" stop="42943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44062" g_stop="43814" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43813" i_stop="43610" i_length="204">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43609" g_stop="43243" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="615" r_length="366" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E214821" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44062" e_stop="43814"/>
          <exon e_start="43609" e_stop="43243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCGAGGTATTAAAATTAAACCTTGTTTTCCCCCGAGTTTAAGTTATGTACATTAGCACATATAATATCTATAAGGTCATAACACGTTAACTTTTTGAGGATTCCTTCACATAGTGATTGTAAATGACTGATTTTTGCAATCTTTTCGACCTTGGAAAATAGTGAGTATTGATGATGATATACGCGTTGTTGTGTGTTAAACTAATGTAGGTTTTTGCCAACTAAGAAAAATCGAAGGATGAAGGAGATCGATAAAAACGTTCAAGCAATGATTAGAGGAATAATTGATAAAAGAGTGAAGGCATTGAAAGCAGGGGAGGCCAATACTGATGACTTATTAGGGATGTTGTTGGAATCCAACTTTAAACAAATTGAACAACATGGCAACAAGGATTTTGGTATGAGTACGCGAGAGATCATCGAGGAGTGTAAATTGTTCTATTTTGCTGGACAAGAAACCACCTCTGTATTGCTTGTATGGACTATGATTTTGTTGAGTAGACATCTAGATTGGCAAACTCGCGCTAGAGAAGAGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGA</genome_strand>
        <mrna_strand>GAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCGAG............................................................................................................................................................................................................GTTTTTGCCAACTAAGAAAAATCGAAGGATGAAGGAGATCGATAAAAACGTTCAAGCAATGATTAGAGGAATAATTGATAAAAGAGTGAAGGCATTGAAAGCAGGGGAGGCCAATACTGATGACTTATTAGGGATGTTGTTGGAATCCAACTTTAAACAAATTGAACAACATGGCAACAAGGATTTTGGTATGAGTACGCGAGAGATCATCGAGGAGTGTAAATTGTTCTATTTTGCTGGACAAGAAACCACCTCTGTATTGCTTGTATGGACTATGATTTTGTTGAGTAGACATCTAGATTGGCAAACTCGCGCTAGAGAA-AGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212754" ref_strand="+" ref_description="SGN-E212754 [cLEC-73-F20]">
      <seq>atggaagttgttagattgggcatggtttaggccaagaaaactagaaaaatgcctaagaaaacaaggtctcaaagggaactcttacaaattaatttttggagatctcaaagagttagccaaaagctttgaagatgttaagtccaagccattgaatgtctttgatgatgacataactcctagaattgttccttattttgttgatacaatcaagaaacatggtaaaaattgttttatatggattgggccaaagcctatggtattagtaaatgatgctgatgtaataagagatgtgtttaacaaatatgttctctaccaaaagcctaaaccaactcccctcaccaagttgctagcacaaggacttgcaagctatgaagaggataaatgggcaatgcatagaaaaatcctcaatcctgctttccatatggagaagattaagaatatggttccagcaattcatttgagctgcactgaaatggtgagccaatgggaggagtcaatctcaacgaaaggaacatcttgtgaaatcgatatatggccttaccttcaaaaattgtctagtgatgtgatttctcgaacagcctttggaagcaactatgaagaaggtcgaatgatatttgagcttcaaaagaacaagctcagcatttcattgaagctactcgtaccttgtatattctaggatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="48020" stop="43516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47720" g_stop="47503" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47264" g_stop="47047" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="436" r_length="218" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44061" g_stop="43816" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="681" r_length="245" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E212754" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47720" e_stop="47503"/>
          <exon e_start="47264" e_stop="47047"/>
          <exon e_start="44061" e_stop="43816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATGGTAAGCTTTGTTTTTGTTTCTCATCTAATGATGTTCTTTGTACCTGTTTTGAAGTTTGATTAATTCAGATTCTGACTGAACATGAGACTTCATATTCCCAGGGCTCGAATTCAAGAACTCTAATTAAGAAGGGACAATTACATTAAAAGTTTACCTAAGAAATTTGTTATTAGTTTATCGCTAAATAACCCGTAGCTAACATGACATATTGATATAAATCCATTATACAATTTTACAGGTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAGGTATTTCTCAAGATATATTTTTATTAATATTTCCTTCGTTGTAACATATGTGATACACTTTTCTTGATAGTCTGTTCGATTAAGAATATCATCTTTCTATGGTTAGAAAGTATTATAACTTTGAAATATTCCTTTTGCCATTAGTGAAATGAGTTATAGTCGTGCAAGTTTAACATTTGTTTTATACCTAAAATTTCAAGTCTGTCTGTTTTTCTTTCTTAAACTTTCGACCAAGGGGGCTTCACACACTCAGAGGCGGATCTAGGATTTGAAGGTCCTAGGTGTTACATCGTTCAAGTAAGATAAGCGGGTCGGTTGCTTTAATTTTGAGTTACAATCGAGTTATTTATCTTTTTTCGGTCTTTATAAACAAATCGATCAAAACATGCATGTTAGTAATATTTTCTTTTAGATATGCGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTGGAGCTGATATACCCCTTGTTATAAAAGTGGCTCATATATACCCCTACATATAAACAAATGGCTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAAGATAATTTTAATCTAACTTTTTATTATTTTTTTCTACAATATATAATCCTATATAAGTAACTTTAATCCTCGTCAAACATATTTTTTTTGACTTTTTTTTGTTTCAATGACTAATTTAGAATTATTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTTTTGTAGATGGCCAAATTTTTTTCTTTAAATACAAAAATCAAATTACAATATAGACAAAAAATAGTTTAATTTTTTTTCTTTAAACAAAGGAATGAAAGAAAAAATAAAATAAGAATAAGAAACTCAAATAATTCTAATAAAAAAAGTCAAAAAATAATTTATGTAGTAAAAAAAATTAAAATATACATTGAATTTTGATAAAAGAATCATATATACCCCTATGTAATTTTTAAAAAAAATTAAAAGTAATAAATATACACTTAAAACTATTTTTTTTAATTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAATCTTTTGTATAACGGTAAGGTCATATATGAACCACTTTCATAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAGGGGTATATCATACCATTTTCCCTTTTAGATATTATGAGATAGAGCTAAGTAACAGTTCAATTTTTATTTCTTTTTAGGAATTAGTGACCTTATTCGCTGAAACTTTGAGGAAAAAAGAGTTTTTTCACACTAAAATTTGAGCTTGTATAAACTATCTAATATTGTTATTTCAATATATTCATATTTCATTAGCTTTATGTGTTGTTGCAAAATATAAAAAAGAAAATACAAATTTTAGTTTCAATCTAGTCATCTTACTTAGCAAGAATGTTGGTGAAGATCGAAAGATCCTTCAAATTAAAAGAACTCTAATTAAAATATTCATCATTATTAAAATTACTATTTAAATACATTCTTAATAATATTTATGTCACGTTCCTAATTTAATTGATAAAGTATAAACATACGACACTCATATCAAGAGATTAATAATTAGTGAAAGAGAAAGTAAAAAAACATAAAGGGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTAGAGCTGATATACCCTCGTTATAAAAGTGACTCATATATACCCCTACATATAAACAAATGACTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAATAATTTTAATCTAAATTTTTGTTATTTTTTCTAAAAAATATAATCCCATATGAATAAATTTAATCCTCGTCGAACAAATTTTTTTTGACTTTTTTTTTTGTTTTAATGACTAATTTATAATTACTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCTATTAAATAATTATGATGAATAAGAATTTAAATTAACAAAGAATACTTGTAAATAAATAAGAACGAATGGATCACACATCAATAAAAAAAAAAGACAAAACAAAAGGAAAAAAAAGAAAGAAAAAGCTTCCAAAAATTGATGCGCCAACAAAGGTTCAAACTTGTGCTGCCAATCTTGCAGATTAACTACTTTGCCAATTGAACTGTTAATCATTTTATTTAGTGAGTGACAAAGAAAAAAAATCGTTTTCTTAAACATGTATACACACATATAAAGTTTTTTTCGAGATCAACGGGCACCCATAGATCCGCCCCTACACACACTTATACAATAAGTATGTTGTTTTGTATCCCCTTTGAGAAAATCCTGGCTCCTCCACTGTCGTCTATATGTATGGCTTACATATGAATGTTGAAGATATGTTTCAGTTTTTAACCGTTTATGCTTTTAAATAAGATAGTCGCACATAATTCAATAAAAGAAGTTTGTTTCGTGATCCACTTGTATTGATTATCACAAATTCATGATATGATATAATCAACTCTGCTTTCATTCTGTTTTTGTTTTTCATTTTTTGTTCCTTTCTATGACTTGCACTAATGTGTGGTTTACAAATGTGTAGAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCG</genome_strand>
        <mrna_strand>ATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG..............................................................................................................................................................................................................................................GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGATGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTC-AAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206103" ref_strand="+" ref_description="SGN-E206103 [cLEC-29-K11]">
      <seq>taagtccaagccattgaatgtctttgatgatgacataactcctagaattgttccttattttgttgatacaatcaagaaacatggtaaaaattgttttatatggattgggccaaagcctatggtattagtaaatgatgctgaggtaataagagatgtgtttaacaaatatgttctctaccaaaagcctaaaccaactcccctcaccaagttgctagcacaaggacttgcaagctatgaagaggataaatgggcaatgcatagaaaaatcctcaatcctgctttccatatggagaagattaagaatatggttccagcaattcatttgagctgcactgaaatggtgagccaatgggaggagtcaatctcaacgaaaggaacatcttgtgaaatcgatatatggccttaccttcaaaaattgtctagtgatgtgatttctcgaacagcctttggaagcaactatgaagaaggtcgaatgatatttgagcttcaaaaagaacaagctcagcatttcattgaagctactcgtaccttgtatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="47885" stop="43526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47585" g_stop="47503" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47264" g_stop="47047" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="301" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44061" g_stop="43826" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="537" r_length="236" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E206103" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47585" e_stop="47503"/>
          <exon e_start="47264" e_stop="47047"/>
          <exon e_start="44061" e_stop="43826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATGGTAAGCTTTGTTTTTGTTTCTCATCTAATGATGTTCTTTGTACCTGTTTTGAAGTTTGATTAATTCAGATTCTGACTGAACATGAGACTTCATATTCCCAGGGCTCGAATTCAAGAACTCTAATTAAGAAGGGACAATTACATTAAAAGTTTACCTAAGAAATTTGTTATTAGTTTATCGCTAAATAACCCGTAGCTAACATGACATATTGATATAAATCCATTATACAATTTTACAGGTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAGGTATTTCTCAAGATATATTTTTATTAATATTTCCTTCGTTGTAACATATGTGATACACTTTTCTTGATAGTCTGTTCGATTAAGAATATCATCTTTCTATGGTTAGAAAGTATTATAACTTTGAAATATTCCTTTTGCCATTAGTGAAATGAGTTATAGTCGTGCAAGTTTAACATTTGTTTTATACCTAAAATTTCAAGTCTGTCTGTTTTTCTTTCTTAAACTTTCGACCAAGGGGGCTTCACACACTCAGAGGCGGATCTAGGATTTGAAGGTCCTAGGTGTTACATCGTTCAAGTAAGATAAGCGGGTCGGTTGCTTTAATTTTGAGTTACAATCGAGTTATTTATCTTTTTTCGGTCTTTATAAACAAATCGATCAAAACATGCATGTTAGTAATATTTTCTTTTAGATATGCGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTGGAGCTGATATACCCCTTGTTATAAAAGTGGCTCATATATACCCCTACATATAAACAAATGGCTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAAGATAATTTTAATCTAACTTTTTATTATTTTTTTCTACAATATATAATCCTATATAAGTAACTTTAATCCTCGTCAAACATATTTTTTTTGACTTTTTTTTGTTTCAATGACTAATTTAGAATTATTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTTTTGTAGATGGCCAAATTTTTTTCTTTAAATACAAAAATCAAATTACAATATAGACAAAAAATAGTTTAATTTTTTTTCTTTAAACAAAGGAATGAAAGAAAAAATAAAATAAGAATAAGAAACTCAAATAATTCTAATAAAAAAAGTCAAAAAATAATTTATGTAGTAAAAAAAATTAAAATATACATTGAATTTTGATAAAAGAATCATATATACCCCTATGTAATTTTTAAAAAAAATTAAAAGTAATAAATATACACTTAAAACTATTTTTTTTAATTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAATCTTTTGTATAACGGTAAGGTCATATATGAACCACTTTCATAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAGGGGTATATCATACCATTTTCCCTTTTAGATATTATGAGATAGAGCTAAGTAACAGTTCAATTTTTATTTCTTTTTAGGAATTAGTGACCTTATTCGCTGAAACTTTGAGGAAAAAAGAGTTTTTTCACACTAAAATTTGAGCTTGTATAAACTATCTAATATTGTTATTTCAATATATTCATATTTCATTAGCTTTATGTGTTGTTGCAAAATATAAAAAAGAAAATACAAATTTTAGTTTCAATCTAGTCATCTTACTTAGCAAGAATGTTGGTGAAGATCGAAAGATCCTTCAAATTAAAAGAACTCTAATTAAAATATTCATCATTATTAAAATTACTATTTAAATACATTCTTAATAATATTTATGTCACGTTCCTAATTTAATTGATAAAGTATAAACATACGACACTCATATCAAGAGATTAATAATTAGTGAAAGAGAAAGTAAAAAAACATAAAGGGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTAGAGCTGATATACCCTCGTTATAAAAGTGACTCATATATACCCCTACATATAAACAAATGACTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAATAATTTTAATCTAAATTTTTGTTATTTTTTCTAAAAAATATAATCCCATATGAATAAATTTAATCCTCGTCGAACAAATTTTTTTTGACTTTTTTTTTTGTTTTAATGACTAATTTATAATTACTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCTATTAAATAATTATGATGAATAAGAATTTAAATTAACAAAGAATACTTGTAAATAAATAAGAACGAATGGATCACACATCAATAAAAAAAAAAGACAAAACAAAAGGAAAAAAAAGAAAGAAAAAGCTTCCAAAAATTGATGCGCCAACAAAGGTTCAAACTTGTGCTGCCAATCTTGCAGATTAACTACTTTGCCAATTGAACTGTTAATCATTTTATTTAGTGAGTGACAAAGAAAAAAAATCGTTTTCTTAAACATGTATACACACATATAAAGTTTTTTTCGAGATCAACGGGCACCCATAGATCCGCCCCTACACACACTTATACAATAAGTATGTTGTTTTGTATCCCCTTTGAGAAAATCCTGGCTCCTCCACTGTCGTCTATATGTATGGCTTACATATGAATGTTGAAGATATGTTTCAGTTTTTAACCGTTTATGCTTTTAAATAAGATAGTCGCACATAATTCAATAAAAGAAGTTTGTTTCGTGATCCACTTGTATTGATTATCACAAATTCATGATATGATATAATCAACTCTGCTTTCATTCTGTTTTTGTTTTTCATTTTTTGTTCCTTTCTATGACTTGCACTAATGTGTGGTTTACAAATGTGTAGAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATAT</genome_strand>
        <mrna_strand>TAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG..............................................................................................................................................................................................................................................GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201129" ref_strand="+" ref_description="SGN-E201129 [cLEC-10-K8]">
      <seq>ttcagtaatatatgcatggaagttgttagattgggcatggtttaggccaagaaaactagaaaaatgcctaagaaaacaaggtctcaaagggaactcttacaaattaatttttggagatctcaaagagttagccaaaagctttgaagatgttaagtccaagccattgaatgtctttgatgatgacataactcctagaattgttccttattttgttgatacaatcaagaaacatggtaaaaattgttttatatggattgggccaaagcctatggtattagtaaatgatgctgaggtaataagagatgtgtttaacaaatatgttctctaccaaaagcctaaaccaactcccctcaccaagttgctagcacaaggacttgcaagctatgaagaggataaatgggcaatgcatagaaaaatcctcaatcctgctttccatatggagaagattaagaatatggttccagcaattcatttgagctgcactgaaatggtgagccaatgggaggagtcaatctcaacgaaaggaacatcttgtgaaatcgatatatggccttaccttcaaaaattgtctagtgatgtgatttctcgaacagcctttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="48035" stop="43612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47735" g_stop="47503" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47264" g_stop="47047" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="451" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44061" g_stop="43912" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="601" r_length="150" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E201129" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47735" e_stop="47503"/>
          <exon e_start="47264" e_stop="47047"/>
          <exon e_start="44061" e_stop="43912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATGGTAAGCTTTGTTTTTGTTTCTCATCTAATGATGTTCTTTGTACCTGTTTTGAAGTTTGATTAATTCAGATTCTGACTGAACATGAGACTTCATATTCCCAGGGCTCGAATTCAAGAACTCTAATTAAGAAGGGACAATTACATTAAAAGTTTACCTAAGAAATTTGTTATTAGTTTATCGCTAAATAACCCGTAGCTAACATGACATATTGATATAAATCCATTATACAATTTTACAGGTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAGGTATTTCTCAAGATATATTTTTATTAATATTTCCTTCGTTGTAACATATGTGATACACTTTTCTTGATAGTCTGTTCGATTAAGAATATCATCTTTCTATGGTTAGAAAGTATTATAACTTTGAAATATTCCTTTTGCCATTAGTGAAATGAGTTATAGTCGTGCAAGTTTAACATTTGTTTTATACCTAAAATTTCAAGTCTGTCTGTTTTTCTTTCTTAAACTTTCGACCAAGGGGGCTTCACACACTCAGAGGCGGATCTAGGATTTGAAGGTCCTAGGTGTTACATCGTTCAAGTAAGATAAGCGGGTCGGTTGCTTTAATTTTGAGTTACAATCGAGTTATTTATCTTTTTTCGGTCTTTATAAACAAATCGATCAAAACATGCATGTTAGTAATATTTTCTTTTAGATATGCGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTGGAGCTGATATACCCCTTGTTATAAAAGTGGCTCATATATACCCCTACATATAAACAAATGGCTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAAGATAATTTTAATCTAACTTTTTATTATTTTTTTCTACAATATATAATCCTATATAAGTAACTTTAATCCTCGTCAAACATATTTTTTTTGACTTTTTTTTGTTTCAATGACTAATTTAGAATTATTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTTTTGTAGATGGCCAAATTTTTTTCTTTAAATACAAAAATCAAATTACAATATAGACAAAAAATAGTTTAATTTTTTTTCTTTAAACAAAGGAATGAAAGAAAAAATAAAATAAGAATAAGAAACTCAAATAATTCTAATAAAAAAAGTCAAAAAATAATTTATGTAGTAAAAAAAATTAAAATATACATTGAATTTTGATAAAAGAATCATATATACCCCTATGTAATTTTTAAAAAAAATTAAAAGTAATAAATATACACTTAAAACTATTTTTTTTAATTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAATCTTTTGTATAACGGTAAGGTCATATATGAACCACTTTCATAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAGGGGTATATCATACCATTTTCCCTTTTAGATATTATGAGATAGAGCTAAGTAACAGTTCAATTTTTATTTCTTTTTAGGAATTAGTGACCTTATTCGCTGAAACTTTGAGGAAAAAAGAGTTTTTTCACACTAAAATTTGAGCTTGTATAAACTATCTAATATTGTTATTTCAATATATTCATATTTCATTAGCTTTATGTGTTGTTGCAAAATATAAAAAAGAAAATACAAATTTTAGTTTCAATCTAGTCATCTTACTTAGCAAGAATGTTGGTGAAGATCGAAAGATCCTTCAAATTAAAAGAACTCTAATTAAAATATTCATCATTATTAAAATTACTATTTAAATACATTCTTAATAATATTTATGTCACGTTCCTAATTTAATTGATAAAGTATAAACATACGACACTCATATCAAGAGATTAATAATTAGTGAAAGAGAAAGTAAAAAAACATAAAGGGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTAGAGCTGATATACCCTCGTTATAAAAGTGACTCATATATACCCCTACATATAAACAAATGACTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAATAATTTTAATCTAAATTTTTGTTATTTTTTCTAAAAAATATAATCCCATATGAATAAATTTAATCCTCGTCGAACAAATTTTTTTTGACTTTTTTTTTTGTTTTAATGACTAATTTATAATTACTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCTATTAAATAATTATGATGAATAAGAATTTAAATTAACAAAGAATACTTGTAAATAAATAAGAACGAATGGATCACACATCAATAAAAAAAAAAGACAAAACAAAAGGAAAAAAAAGAAAGAAAAAGCTTCCAAAAATTGATGCGCCAACAAAGGTTCAAACTTGTGCTGCCAATCTTGCAGATTAACTACTTTGCCAATTGAACTGTTAATCATTTTATTTAGTGAGTGACAAAGAAAAAAAATCGTTTTCTTAAACATGTATACACACATATAAAGTTTTTTTCGAGATCAACGGGCACCCATAGATCCGCCCCTACACACACTTATACAATAAGTATGTTGTTTTGTATCCCCTTTGAGAAAATCCTGGCTCCTCCACTGTCGTCTATATGTATGGCTTACATATGAATGTTGAAGATATGTTTCAGTTTTTAACCGTTTATGCTTTTAAATAAGATAGTCGCACATAATTCAATAAAAGAAGTTTGTTTCGTGATCCACTTGTATTGATTATCACAAATTCATGATATGATATAATCAACTCTGCTTTCATTCTGTTTTTGTTTTTCATTTTTTGTTCCTTTCTATGACTTGCACTAATGTGTGGTTTACAAATGTGTAGAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGA</genome_strand>
        <mrna_strand>TTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG..............................................................................................................................................................................................................................................GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213665" ref_strand="+" ref_description="SGN-E213665 [cLEC-76-B7]">
      <seq>atggaagttgttacattgggcatggtttaggccaagaaaactagaaaaatgcctaagaaaacaaggtctcaaagggaactcttacaaattaatttttggagatctcaaagagttagccaaaagctttgaagatgttaagtccaagccattgaatgtctttgatgatgacataactcctagaattgttccttattttgttgatacaatcaagaaacatggtaaaaattgttttatatggattgggccaaagcctatggtattagtaaatgatgctgatgtaataagagatgtgtttaacaaatatgttctctaccaaaagcctaaaccaactcccctcaccaagttgctagcacaaggacttgcaagctatgaagaggataaatgggcaatgcatagaaaaatcctcaatcctgctttccatatggagaagattaagaatatggttccagcaattcatttgagctgcactgaaatggtgagccaatgggaggagtcaatctcaacgaaaggaacatcttgtgaaatcgatatatggccttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="48020" stop="43656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47720" g_stop="47503" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47264" g_stop="47047" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="436" r_length="218" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44061" g_stop="43956" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="542" r_length="106" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E213665" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47720" e_stop="47503"/>
          <exon e_start="47264" e_stop="47047"/>
          <exon e_start="44061" e_stop="43956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATGGTAAGCTTTGTTTTTGTTTCTCATCTAATGATGTTCTTTGTACCTGTTTTGAAGTTTGATTAATTCAGATTCTGACTGAACATGAGACTTCATATTCCCAGGGCTCGAATTCAAGAACTCTAATTAAGAAGGGACAATTACATTAAAAGTTTACCTAAGAAATTTGTTATTAGTTTATCGCTAAATAACCCGTAGCTAACATGACATATTGATATAAATCCATTATACAATTTTACAGGTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAGGTATTTCTCAAGATATATTTTTATTAATATTTCCTTCGTTGTAACATATGTGATACACTTTTCTTGATAGTCTGTTCGATTAAGAATATCATCTTTCTATGGTTAGAAAGTATTATAACTTTGAAATATTCCTTTTGCCATTAGTGAAATGAGTTATAGTCGTGCAAGTTTAACATTTGTTTTATACCTAAAATTTCAAGTCTGTCTGTTTTTCTTTCTTAAACTTTCGACCAAGGGGGCTTCACACACTCAGAGGCGGATCTAGGATTTGAAGGTCCTAGGTGTTACATCGTTCAAGTAAGATAAGCGGGTCGGTTGCTTTAATTTTGAGTTACAATCGAGTTATTTATCTTTTTTCGGTCTTTATAAACAAATCGATCAAAACATGCATGTTAGTAATATTTTCTTTTAGATATGCGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTGGAGCTGATATACCCCTTGTTATAAAAGTGGCTCATATATACCCCTACATATAAACAAATGGCTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAAGATAATTTTAATCTAACTTTTTATTATTTTTTTCTACAATATATAATCCTATATAAGTAACTTTAATCCTCGTCAAACATATTTTTTTTGACTTTTTTTTGTTTCAATGACTAATTTAGAATTATTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTTTTGTAGATGGCCAAATTTTTTTCTTTAAATACAAAAATCAAATTACAATATAGACAAAAAATAGTTTAATTTTTTTTCTTTAAACAAAGGAATGAAAGAAAAAATAAAATAAGAATAAGAAACTCAAATAATTCTAATAAAAAAAGTCAAAAAATAATTTATGTAGTAAAAAAAATTAAAATATACATTGAATTTTGATAAAAGAATCATATATACCCCTATGTAATTTTTAAAAAAAATTAAAAGTAATAAATATACACTTAAAACTATTTTTTTTAATTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAATCTTTTGTATAACGGTAAGGTCATATATGAACCACTTTCATAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAGGGGTATATCATACCATTTTCCCTTTTAGATATTATGAGATAGAGCTAAGTAACAGTTCAATTTTTATTTCTTTTTAGGAATTAGTGACCTTATTCGCTGAAACTTTGAGGAAAAAAGAGTTTTTTCACACTAAAATTTGAGCTTGTATAAACTATCTAATATTGTTATTTCAATATATTCATATTTCATTAGCTTTATGTGTTGTTGCAAAATATAAAAAAGAAAATACAAATTTTAGTTTCAATCTAGTCATCTTACTTAGCAAGAATGTTGGTGAAGATCGAAAGATCCTTCAAATTAAAAGAACTCTAATTAAAATATTCATCATTATTAAAATTACTATTTAAATACATTCTTAATAATATTTATGTCACGTTCCTAATTTAATTGATAAAGTATAAACATACGACACTCATATCAAGAGATTAATAATTAGTGAAAGAGAAAGTAAAAAAACATAAAGGGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTAGAGCTGATATACCCTCGTTATAAAAGTGACTCATATATACCCCTACATATAAACAAATGACTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAATAATTTTAATCTAAATTTTTGTTATTTTTTCTAAAAAATATAATCCCATATGAATAAATTTAATCCTCGTCGAACAAATTTTTTTTGACTTTTTTTTTTGTTTTAATGACTAATTTATAATTACTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCTATTAAATAATTATGATGAATAAGAATTTAAATTAACAAAGAATACTTGTAAATAAATAAGAACGAATGGATCACACATCAATAAAAAAAAAAGACAAAACAAAAGGAAAAAAAAGAAAGAAAAAGCTTCCAAAAATTGATGCGCCAACAAAGGTTCAAACTTGTGCTGCCAATCTTGCAGATTAACTACTTTGCCAATTGAACTGTTAATCATTTTATTTAGTGAGTGACAAAGAAAAAAAATCGTTTTCTTAAACATGTATACACACATATAAAGTTTTTTTCGAGATCAACGGGCACCCATAGATCCGCCCCTACACACACTTATACAATAAGTATGTTGTTTTGTATCCCCTTTGAGAAAATCCTGGCTCCTCCACTGTCGTCTATATGTATGGCTTACATATGAATGTTGAAGATATGTTTCAGTTTTTAACCGTTTATGCTTTTAAATAAGATAGTCGCACATAATTCAATAAAAGAAGTTTGTTTCGTGATCCACTTGTATTGATTATCACAAATTCATGATATGATATAATCAACTCTGCTTTCATTCTGTTTTTGTTTTTCATTTTTTGTTCCTTTCTATGACTTGCACTAATGTGTGGTTTACAAATGTGTAGAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACC</genome_strand>
        <mrna_strand>ATGGAAGTTGTTACATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG..............................................................................................................................................................................................................................................GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGATGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="45425" stop="44381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45125" g_stop="44684" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45125" e_stop="44684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACC-TGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATA-ATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCT</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAG--AAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401385" ref_strand="+" ref_description="SGN-E401385 [PPC-4-C3]">
      <seq>gttgcttactacttagtttcatttttattaacaataactatagtaatatatgcatggaagttgttagattgggcatggtttaggccaaggaaactagaaaagtgcctaagaaaacaaggtctcaaagggaactcttacaaattaatttttggagatctcaaagagttagccaaaagctttgaagatgccaactccaagccattgaaagtctctgatgatgatatatgtcctagaattgttccttattttgttgatacaatcaaaaaacatggtaaaaattgttttatatggattgggccaaagcctatggtattagtaagggaagctgaggtaataagagatgtgtttaacaaatatgttctctaccaaaagcctaaatcaactcccatcaccaagttgctagcacaaggagtttcaagctatgaagaggataaatgggcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="48073" stop="46793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47773" g_stop="47503" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238">
            <donor d_prob="0.990" d_score="0.92"/>
            <acceptor a_prob="0.849" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47264" g_stop="47093" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="443" r_length="172" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E401385" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47773" e_stop="47503"/>
          <exon e_start="47264" e_stop="47093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCTTACTACTTAGTTTCTTTTTTATTAACAATAACTTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATGGTAAGCTTTGTTTTTGTTTCTCATCTAATGATGTTCTTTGTACCTGTTTTGAAGTTTGATTAATTCAGATTCTGACTGAACATGAGACTTCATATTCCCAGGGCTCGAATTCAAGAACTCTAATTAAGAAGGGACAATTACATTAAAAGTTTACCTAAGAAATTTGTTATTAGTTTATCGCTAAATAACCCGTAGCTAACATGACATATTGATATAAATCCATTATACAATTTTACAGGTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAAT</genome_strand>
        <mrna_strand>GTTGCTTACTACTTAGTTTCATTTTTATTAACAATAACTATAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGGAAACTAGAAAAGTGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGCCAACTCCAAGCCATTGAAAGTCTCTGATGATGATATATGTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAAAAACATG..............................................................................................................................................................................................................................................GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAGGGAAGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAATCAACTCCCATCACCAAGTTGCTAGCACAAGGAGTTTCAAGCTATGAAGAGGATAAATGGGCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723486" ref_strand="+" ref_description="SGN-E723486 [FC20CF03]">
      <seq>agctctcttctttcaacaaccattaatcgatttgcaattcaaaatttcagggagagtttttctcaaaaatatatgatgttggtgacgaattgacaaatgcactggaggaatgtgatttttttatcaaagatgatccagaagatccaagcatgaaagatgtatctgtttttgtctaattctatacagtatgtaaatgtatataattagtattcccacatatgaaaatgttaaactaagtaagtatctcacttcgacattcagtagtatgacattcacatgaaaatatattatgaacaaatttggcagctataatgtgttcgaattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="50450" stop="100413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50750" g_stop="50799" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50800" i_stop="50974" i_length="175">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50975" g_stop="51035" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="111" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51036" i_stop="53959" i_length="2924">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53960" g_stop="54175" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="328" r_length="217" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54176" i_stop="54769" i_length="594">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54770" g_stop="54799" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="358" r_length="30" r_score="0.700"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E723486" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50750" e_stop="50799"/>
          <exon e_start="50975" e_stop="51035"/>
          <exon e_start="53960" e_stop="54175"/>
          <exon e_start="54770" e_stop="54799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTCTTCTTTCAACAACCATTAATCGATTTGCAATTCAAAATTTCAGGTATGTTTTCTTTATTTGGTAAAACATGGTCAAAGAAAGGATTAGACGAAATAATAAATAATAATATAAATACAATTTAGAAATTTTATATCATAAACTTTGAAAGCAAGTAGAGAATTGACAGAAAATTGAGATTAAAACATGCATAAATTTTATGATCAGTAAACTTTTGTAGGGAGAGTTTTTCTCAAAAATATATGATGTTGGTGACGAATTGACAAATGCACTGGAGGAATGTAAGTTCCAAATTCTACTTTTATGAACTATAATATTGATTTCTAACAGCCCTGCGACTATTTCAAGTGCATGTGTTCTTCAATCTCTAACTTGGTTTCATTCAAATGTTATTAGAGTAAGTCCACAAAACATTTTTCTCTTCATTTCTATAAAGCGAATTTCATTTTTTCAGCTTTTTCTCTTTGGAAATTATTTCCCTTTTCTTTACAAATTTTCACAAACTACTTCGTTGGATGAATAGGGAAGTTCTCGATCTATGTATCACGTCAAAATTAATTGAACTTCAAAATCTCTAACCAAAAAAATTAATAATATATAATTATAATTATTATAATAAATAAAAAAATATGAAACATAGAGATGTATTTGTACGAGAAGTGTTTATAATTTTTTTTCTTTCTAGGTTAATAATTAAATTTAAAATAAAAAATTTTAATTTGTGATATGTTTATTCATTTTGTCTGAAATCTCAAAAATCTCTAACAAAAAAAAATATGAATTATAATTATTATAATAAATAAAAAAAATATGAAACATAGAGATGTATATGTACAAGAGGTGGAGTGGAGTAGGCTCCTAGCTTTTAGCAGTGTAGACTGTTGTTCTTCATTTTTTTGCCTTTTAGCAAAGACTTTTCCCCCTTTGACCTGAATATCAAAAATCTCTAACAAAAAAAATTAATAATTTATAATAATAATTATTATAATAAATAAAAAAATATGAAACATAGAGATGTATTTATACCAGAAGTGTTTATAATTTATTTTTCTTTCTAGATTAATATTTAAATTTTTTAAAAAAAAATATAGGGGAAGTGGTTATAATACGTGTCTTAATGAATAATAATTTATAATTATAATTATTATAATAAATAAAAAAATATGAAACATAGAGATGTATATGTACAAGAAGTGTTTATAATTTATTTTTCTTTCTAGATTAATATTTAAATTATATAAAAAAAAAAGATAGGGAAAGTGGTTATAATACGTGTCTTAAAGAAAATATATATTGCTTTACACAATAACAAGTGGAGTGGAGTAGGCTCCTGCTATTTAGGCTTTTAGCAGTGTAGGCTACTGTTTTTCATTTTTTTGCCTTTTAGCAAAGATTTTTCCCCTTTTGACTAATATATTACAGTGCATTCTTTATCACATTGATATGAAAAAAATTGTAATTTATAGTACTATTATATAATTTTTGAATATTAATTTTCTCTTTGCTTAAAATATTAAATTAATGTAATTAAAAATGAACAGAGATGGTTTGTAATTATATAATGTTTTAATTGTTTATTTCACGATAGGTAGGTCGTATCAATTTTTCGACAGCTTACTAACTTTAATCATAAAAAAGTTATCTATCCTAATTAATGTTTCAGATCTTACACTTGGCTTTGTGAGCTTTCTTATTTGCGATGCCCCCACTAATCAAATGCTTTATAGGAATTATTATAATAAATAAAAAATATGAAACATAGAGATGTTTATGTACAAGAAGTGTTTATAATTTTTTTTCTCAAGATTAATATTTAAATTTAAAATAATCAATTTTAATTTCTGATATGTTCATTCATTTTGTCTGAATATCAAAATTCTCTAACCAAAAAAATATGAATAATAATTTATAATTATAATTATTATAATAAATAAATAAATAAATATGAAACATAGAGATGTATATGTACAAGAAGTGTTTATAATTTCTTTTTCTTTGTAGATTAATATTTAAATTTAAAAGAAAAAAAGAAAAAATAGGAGAAATGGTTATAATAATTATATGAGATGTATTACAGCAGTAAAAAGGATACGTGTCTTAAAGAAAATATATATTTCTTTACAAAATAACAAATGGAGTGGTGTAGGCTCCTCCTTTTTAGGCTGTTAGCAGTAGTGTATGTTATTGTTTTCACTTTTTTTGGCTTTTAGCAAAGACTTTTCCTCTTTTATATATATATATATACCTGCACAAGTTATGTCATTTTATATTTGGTTTATCATGACCCTATAAAATTGATCTAAACTCTGGAATAGGCTTTGATCAAACACTACTATTGGTATGTTACTTTTCAAAACTATAGTAATCTGTTGATTCTTTCACATTTTTCATCACATTTTATTTGTACATCATGCTATTTTTTTCTTTCTCTATAAGGGTTAAAATTTGGGTTGTGTTATTCTGTTTCCACCTCTTCATGATTTATCGAAACTTGAGATTTTTAATATCGTCATCATATGTTCATTTACTATCTGCTGATGATCTAATTTGAAACTCTTGAACTGAATTTTTCCAAGACAAGTTTAAAGGTAAATATTAAAGATATTTCATAAATTTTTTGTCCAGATTGATTAATCCTTTAACATTAATGTCACCATTATGAATCCATTTCTTTATAAATAATGATCCTTTAGTCTTATACATATAAAATATTTTGAGTTGTATCTTATGGCTTACCAAGATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAGTTTAAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGA-TTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATTACTAATTTTTCTCATTGAAATATTAATTTTGTTTGTTTAATATGCAACTAATTAAATTTAGGTCCATTATAAATACCTATAATGCTCCCAACTACAGCATCATCAGCTGAAAGCATGTCTGCAAGCCTAGAGCAATATTATGCATACAAATTTAGCAACTCCTAAATGTTAATTGCTAATTTGTTAACTTTCAGCTACTCTTGATGTTCACTTTCTTCATACTGTCAATTTGCTTAGTAAACAGTGCATTTGTTTTGTGAACAAAATGTTATTTAACCATGTAATGTTGTGAAGTATGCTAATAGTTCAATACAAAATAGTCATCTAATATTGTGAAGTATGCTAATAGTCCAATACAAAGCAGCCAAGCAGAGCTGATACCTGCACTTTGATATATATTGTTCTTAATTCAAAGACAAAATTATCATTTTTATATCCTATTGTTTCAAATCAAAATGTACAAGGAAAGTGACCACAATGTTTTATGGCTAACATGTATTCGTATGTATGAAAGTAATTCCCAATTGAAGTTTTATTATTGAAGGGAATTTTCACCGTGCTTAAGAAATCTTGGTGAAATATTTTGTCTTGATACCGTAATTAAATCAAACAAAAATAAAAGACAAGA</genome_strand>
        <mrna_strand>AGCTCTCTTCTTTCAACAACCATTAATCGATTTGCAATTCAAAATTTCAG...............................................................................................................................................................................GGAGAGTTTTTCTCAAAAATATATGATGTTGGTGACGAATTGACAAATGCACTGGAGGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350143" ref_strand="+" ref_description="SGN-E350143 [cTOS-4-E15]">
      <seq>taactcttcattttacttctctcttcttaacatatactttaattttaaatttgtgtgatcttctgttgttaagattttcttaatcttgtatgagggttgttatctttatagatattgagctttgttcactttgtttggtcatattgtcactttgttttcttgactgtttttgcaatcttttactataaagataatatgaatctttaattaagatctcatttcatacatttgtaattgatgctttacattccatttggctttcttattttcttccactaattctctattttattccaatacgacaaaatgtagtgtttatgctattctggttgacattaccttgctaaatgatctatctatgacatagttttaaaaaaaaataacatacttttgttcatattggtgttattatataaaatgtcttatgtcaatcgtgaaataggaattcaaagatgaggcttagttgaagcttaatgttgccacattttttttcattttgtgttgtaaaagttatgtgatgcgattctgtgctaacaggtgattttttatcaaagatgatctagaagatccaagcatgaaagatgcatctgtttttatcattctatacagtatgtaaatgtatgtaattagtattcccacatatgaaaatgttaaactatgtaagtatctcacttcgacattcagtagtatgacatgcancacgaaatatattatgaacaaatttggcagctataatgtgttcgaatcactaatttttctcattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="53192" stop="54490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53495" g_stop="54190" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="766" r_length="693" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E350143" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350143" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53495" e_stop="54190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAG-TTT--AAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACA-TTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATTACTAATTTTTCTCATTGAA</genome_strand>
        <mrna_strand>ATTTTCTTAATCTTGTATGAGGGTTGTTATCTTTATAGATATTGAGCTTTGTTC-ACTTTGTTTGGTCATATTGTCACTTTGTTTTCTTGACTGTTTTTGCAATCTTTTACTATAAAGATAATATGAATCTTTAATTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACAT-TC---CATTTGGCTTTCTTATTTTCTTCCACTAATTCTCTATTTTATTCCAATACGACAAAATGTAGTGTTTATGCTATTCTGGTTGACATTACCTTGCTAAATGATCTATCTATGACATAGTTTTAAAAAAAAATAACATACTTTTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGAATTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTTTCATTTTGTGTTGTAAAAGTTATGTGATGCGATTCTGTGCTAACAGGTGATTTTTTATCAAAGATGATCTAGAAGATCCAAGCATGAAAGATGCATCTGTTTTTATC--ATTCTATACAGTATGTAAATGTATGTAATTAGTATTCCCACATATGAAAATGTTAAACTATGTAAGTATCTCACTTCGACATTCAGTAGTATGACATGCANCACGAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATCACTAATTTTTCTCATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352249" ref_strand="+" ref_description="SGN-E352249 [cTOS-13-B18]">
      <seq>ttttacttctctcttcttaacatatactttaattttaaatttgtctggtcttctgttgttaagattttcttaatcttgtatgagggttgtcatctttacaactattgggctttgttcactttgtttggtgatattgtcactttgctttcttgactgtttttgcaatcttttactataaagatagtattaatctttaattaagatctcatttcatacatttgtaattgatgctttacattccatttggctttcttattttcttccactaattctcttttctattccaatatgacaaaatgtagtgtttatgctattctggttgacattatcttgctaaatgatctatctatgacatagttttaaaaaaaataacatacttttgttcatattggtgttattatataaaatgtcttatgtcaatcgtgaaatagggattcaaagatgaggcttagttgaagcttaatgttgccacattttttttcattttgtgttgtataagttatgtggtgcgattctgtgctaacaggtgattttttatcaaagatgatccagaagatccaagcatgaaagatgcatctgtttttgtctaattctataccgtatgtaaatgtatgtaattagtattcccacatatgaaaatgttaaactatgtaagtatctcacttcgacattcagtagtatgacattcacatgaaaatatattatgaaacaatttggcagctataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="53192" stop="54459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53495" g_stop="54163" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="730" r_length="667" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E352249" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53495" e_stop="54163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAG-TTT-AAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACA-TTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTG</genome_strand>
        <mrna_strand>ATTTTCTTAATCTTGTATGAGGGTTGTCATCTTTACAACTATTGGGCTTTGTTC-ACTTTGTTTGGTGATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTTACTATAAAGATAGTATTAATCTTTAATTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACAT-TC---CATTTGGCTTTCTTATTTTCTTCCACTAATTCTCTTTTCTATTCCAATATGACAAAATGTAGTGTTTATGCTATTCTGGTTGACATTATCTTGCTAAATGATCTATCTATGACATAGTTTTAAAAAAAATAACATACTTTTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGATTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTTTCATTTTGTGTTGTATAAGTTATGTGGTGCGATTCTGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGCATCTGTTTTTGTCTAATTCTATACCGTATGTAAATGTATGTAATTAGTATTCCCACATATGAAAATGTTAAACTATGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAAACAATTTGGCAGCTATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350595" ref_strand="+" ref_description="SGN-E350595 [cTOS-5-D2]">
      <seq>ctcttcattttacttctctcttcttaacatatactttaattttaaatttgtctggtcttctgttgttaagattttcttaatcttgtatgagggttgtcatctttacaactattgggctttgttcactttgtttggtgatattgtcactttgctttcttgactgtttttgcaatcttttactataaagatagtattaatctttaattaagatctcatttcatacatttgtaattgatgctttacattccatttggctttcttattttcttccactaattctcttttctattccaatatgacaaaatgtagtgtttatgctattctggttgacattatcttgctaaatgatctatctatgacatagttttaaaaaaaataacatacttttgttcatattggtgttattatataaaatgtcttatgtcaatcgtgaaatagggattcaaagatgaggcttagttgaagcttaatgttgccacattttttttcattttgtgttgtataagttatgtggtgcgattctgtgctaacaggtgattttttatcaaagatgatccagaagatccaagcatgaaagatgcatctgtttttgtctaattctataccgtatgtaaatgtatgtaattagtattcccacatatgaaaatgttaaactatgtaagtatctcacttcgacattcagtagtatgacattcacatgaaaatatattatgaacaaatttggcagctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="53192" stop="54459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53495" g_stop="54158" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="732" r_length="662" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E350595" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53495" e_stop="54158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAG-TTT-AAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACA-TTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATA</genome_strand>
        <mrna_strand>ATTTTCTTAATCTTGTATGAGGGTTGTCATCTTTACAACTATTGGGCTTTGTTCA-CTTTGTTTGGTGATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTTACTATAAAGATAGTATTAATCTTTAATTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACAT-TC---CATTTGGCTTTCTTATTTTCTTCCACTAATTCTCTTTTCTATTCCAATATGACAAAATGTAGTGTTTATGCTATTCTGGTTGACATTATCTTGCTAAATGATCTATCTATGACATAGTTTTAAAAAAAATAACATACTTTTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGATTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTTTCATTTTGTGTTGTATAAGTTATGTGGTGCGATTCTGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGCATCTGTTTTTGTCTAATTCTATACCGTATGTAAATGTATGTAATTAGTATTCCCACATATGAAAATGTTAAACTATGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339728" ref_strand="+" ref_description="SGN-E339728 [cTOE-16-M16]">
      <seq>ttcattttacttctctcttcttaacatatactttaattttaaatttgtctggtcttctgttgttaagattttcttaatcttgtatgagggttgtcatctttacaactattgggctttgttcactttgtttggtgatattgtcactttgctttcttgactgtttttgcaatcttttactataaagatagtattaatctttaattaagatctcatttcatacatttgtaattgatgctttacattccatttggctttcttattttcttccactaattctcttttctattccaatatgacaaaatgtagtgtttatgctattctggttgacattatcttgctaaatgatctatctatgacatagttttaaaaaaaataacatacttttgttcatattggtgttattatataaaatgtcttatgtcaatcgtgaaatagggattcaaagatgaggcttagttgaagcttaatgttgccacattttttttcattttgtgttgtataagttatgtggtgcgattctgtgctaacaggtgattttttatcaaagatgatccagaagatccaagcatgaaagatgcatctgtttttgtctaattctataccgtatgtaaatgtatgtaattagtattcccacatatgaaaatgttaaactatgtaagtatctcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="53192" stop="54396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53495" g_stop="54096" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="667" r_length="600" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E339728" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53495" e_stop="54096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAG-TTT-AAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACA-TTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCAC</genome_strand>
        <mrna_strand>ATTTTCTTAATCTTGTATGAGGGTTGTCATCTTTACAACTATTGGGCTTTGTTCA-CTTTGTTTGGTGATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTTACTATAAAGATAGTATTAATCTTTAATTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACAT-TC---CATTTGGCTTTCTTATTTTCTTCCACTAATTCTCTTTTCTATTCCAATATGACAAAATGTAGTGTTTATGCTATTCTGGTTGACATTATCTTGCTAAATGATCTATCTATGACATAGTTTTAAAAAAAATAACATACTTTTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGATTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTTTCATTTTGTGTTGTATAAGTTATGTGGTGCGATTCTGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGCATCTGTTTTTGTCTAATTCTATACCGTATGTAAATGTATGTAATTAGTATTCCCACATATGAAAATGTTAAACTATGTAAGTATCTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352390" ref_strand="+" ref_description="SGN-E352390 [cTOS-9-H9]">
      <seq>tttttttttttttttagctgccaaatttgttcataatatattttcgtgtgcatgtcatactactgaatgtcgaagtgagatacttacatagtttaacattttcatatgtgggaatactaattacatacatttacatactgtatagaatgataaaaacagatgcatctttcatgcttggatcttctagatcatctttgataaaaaatcacctgttagcacagaatcgcatcacataacttttacaacacaaaatgaaaaaaaatgtggcaacattaagcttcaactaagcctcatctttgaattcctatttcacgattgacataagacattttatataataacaccaatatgaacaaaagtatgttatttttttttaaaactatgtcatagatagatcatttagcaaggtaatgtcaaccagaatagcataaacactacattttgtcgtattggaataaaatagagaattagtggaagaaaataagaaagccaaatggaatgtaaagcatcaattacaaatgtatgaaatgagatcttaattaaagattcatattatctttatagtaaaagattgcaaaaacagtcaagaaaacaaagtgacaatatgaccaaacaaagtgaacaaagctcaatatctataaagattacaaccctcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="54459" stop="53211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54170" g_stop="53510" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E352390" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352390" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54170" e_stop="53510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCGAACACATTATAGCTGCCAAATTTGTTCATAATATATTTTCATGTGAATGTCATACTACTGAATGTCGAAGTGAGATACTTACTTAGTTTAACATTTTCATATGTGGGAATACTAATTATATACATTTACATACTGTATAGAATTAGACAAAAACAGATACATCTTTCATGCTTGGATCTTCTGGATCATCTTTGATAAAAAATCACCTGTTAGCACATAATCACATCACATAACTTATACAAGACAAAATG-GAAAAAATGTGGCAACATTAAGCTTCAACTAAGCCTCATCTTTGAAGCCCTATTTCACGATTGACATAAGACATTTTATATAATAACACCAATATGAACAGAAGTATGTTA--TTTTTTT-AAACTCTCTCATAAATAGATCATTTAGCAAGATAATGTCAATCAGAATAGCACAAACACTACATTTTGTCGTATTGGAATAGAATAGAGAATTAGTGAAAGAAAATAAGAAAGTCAAATGTTTGGCATGTAAAGCATCAATTACAAATGTATGAAATGAGATCTTAGTTAAAGATTAATATTATGTTTATAGTGAAAGATTGCAAAAACAGTCAAGAAAGCAAAGTGACAATATGACCAAACAAAGTTGAACAAAGCTCAATAGGTGTAAAAATGACCACCCTCATC</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTAGCTGCCAAATTTGTTCATAATATATTTTCGTGTGCATGTCATACTACTGAATGTCGAAGTGAGATACTTACATAGTTTAACATTTTCATATGTGGGAATACTAATTACATACATTTACATACTGTATAGAA-T-GATAAAAACAGATGCATCTTTCATGCTTGGATCTTCTAGATCATCTTTGATAAAAAATCACCTGTTAGCACAGAATCGCATCACATAACTTTTACAACACAAAATGAAAAAAAATGTGGCAACATTAAGCTTCAACTAAGCCTCATCTTTGAATTCCTATTTCACGATTGACATAAGACATTTTATATAATAACACCAATATGAACAAAAGTATGTTATTTTTTTTTAAAACTATGTCATAGATAGATCATTTAGCAAGGTAATGTCAACCAGAATAGCATAAACACTACATTTTGTCGTATTGGAATAAAATAGAGAATTAGTGGAAGAAAATAAGAAAGCCAAA----TGGAATGTAAAGCATCAATTACAAATGTATGAAATGAGATCTTAATTAAAGATTCATATTATCTTTATAGTAAAAGATTGCAAAAACAGTCAAGAAAACAAAGTGACAATATGACCAAACAAAG-TGAACAAAGCTCAATATCTATAAAGATTACAACCCTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478770" ref_strand="+" ref_description="SGN-E478770 [cSTD-6-P4]">
      <seq>gagaaagcaagtaagagaacccctttccatggagtttttatcatatatgagatcaatggagatttcttacaacatagttatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62107" stop="65008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62407" g_stop="62738" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="554" r_length="221" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64708" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="618" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E478770" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62407" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAGCAAGTGAGAGAACCCCTTTCAATGGAGTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACC-AAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTC</genome_strand>
        <mrna_strand>GAGAAAGCAAGTAAGAGAACCCCTTTCCATGGAGTTTTTATCATATATGAGATCAATGGAGATTTCTTACAACATAGTTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E481882" ref_strand="+" ref_description="SGN-E481882 [cSTD-19-N20]">
      <seq>gagaaagcaagtaagagaacccctttccatggagtttttatcatatatgagatcaatggagatttcttacaacatagttatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62107" stop="64840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62407" g_stop="62738" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64540" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="532" r_length="199" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E481882" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E481882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62407" e_stop="62738"/>
          <exon e_start="64342" e_stop="64540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAAGCAAGTGAGAGAACCCCTTTCAATGGAGTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACC-AAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTAC</genome_strand>
        <mrna_strand>GAGAAAGCAAGTAAGAGAACCCCTTTCCATGGAGTTTTTATCATATATGAGATCAATGGAGATTTCTTACAACATAGTTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E410665" ref_strand="+" ref_description="SGN-E410665 [PPI-17-P1]">
      <seq>ctttcaatggagtttttatgatatatgagatcaatggagatttcttacaacataattatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaattgtgttgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattgaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgttgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62129" stop="65008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62429" g_stop="62738" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="531" r_length="221" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64708" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="595" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E410665" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E410665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62429" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCAATGGAGTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTC</genome_strand>
        <mrna_strand>CTTTCAATGGAGTTTTTATGATATATGAGATCAATGGAGATTTCTTACAACATAATTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATTGTGTTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTGACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTTGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448519" ref_strand="+" ref_description="SGN-E448519 [cSTS-3-O4]">
      <seq>gtttttatatatatgagatcaatggagatttcttacaacataattatagcaacaattagtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaaatggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagtagaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctgaactccatcaacaaaaatggaaaaagttctttcatctggctaggcccctacccaatcgtgttgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctgaaggtcttgtaagccttgaggacgacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaagggatcatcaaccgagatcgatgtatggccagaccttcaaatgatggccagcgaagtcatttctcgcacagcatttgggagtagctatgaagaaggaagatagtatttgaacttcagaaggacaagctgagtatgtaatggaagtagcacgttcaatttatatacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62140" stop="65181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62440" g_stop="62738" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="519" r_length="221" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64881" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="754" r_length="235" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E448519" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62440" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCT</genome_strand>
        <mrna_strand>GTTTTTAT-ATATATGAGATCAATGGAGATTTCTTACAACATAATTATAGCAACAATTAGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAAATGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTAGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTGAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTGTTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTGAAGGTCTTGTAAGCCTTGAGGACGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGATCATCAACCGAGATCGATGTATGGCCAGACCTTCAAATGATGGCCAGCGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAG-ATAGTATTTGAACTTCAGAAGG-ACAAGCTGAGTATGTAATGGAAGTAGCACGTTCAATTTATATACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413614" ref_strand="+" ref_description="SGN-E413614 [STM-18-M11]">
      <seq>gtttttatcatatatgagatcaatggagatttcttacaacatagttatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacataataatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccacaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62140" stop="65060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62440" g_stop="62738" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="520" r_length="221" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64760" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="636" r_length="116" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E413614" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62440" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGAC</genome_strand>
        <mrna_strand>GTTTTTATCATATATGAGATCAATGGAGATTTCTTACAACATAGTTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACATAATAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCACAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472398" ref_strand="+" ref_description="SGN-E472398 [cSTB-28-H23]">
      <seq>gtttttatcatatatgagatcaatggagatttcttacaacatagttatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62140" stop="64836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62440" g_stop="62738" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64536" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="494" r_length="195" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E472398" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E472398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62440" e_stop="62738"/>
          <exon e_start="64342" e_stop="64536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATC</genome_strand>
        <mrna_strand>GTTTTTATCATATATGAGATCAATGGAGATTTCTTACAACATAGTTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324733" ref_strand="+" ref_description="SGN-E324733 [cTOC-8-F8]">
      <seq>ttatcatttatgagatcaatggagagttcttacagcgtgattataacaacaatttgtgttgtaattatgtagatctatacatggaaagtgttgaattgggcatggtttggaccaaaaaaattggaaaattgcttaaagcaaagaggtctaaaaggaaatccatataagttactctatggagatttgaatgaattgacaaaaagtatagttgaagctaaatctaagccattcaatttctcttatgatatagctcaaagactcattccttgtttcctcaacttcatcaacaaaaatggtaaaagttctttcatctggctaggcccctatccaatcgtgttgatcaccaaacctgaacatgtaaaggagattttcacaaagaattatgtgtatctaatgcaaactcatcccaatccattcaccaagttattggctaaaggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62144" stop="64786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62444" g_stop="62738" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.320" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64486" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="440" r_length="145" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E324733" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324733" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62444" e_stop="62738"/>
          <exon e_start="64342" e_stop="64486"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCT</genome_strand>
        <mrna_strand>TTATCATTTATGAGATCAATGGAGAGTTCTTACAGCGTGATTATAACAACAATTTGTGTTGTAATTATGTAGATCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAAGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCATTCAATTTCTCTTATGATATAGCTCAAAGACTCATTCCTTGTTTCCTCAACTTCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACCAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAATGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453407" ref_strand="+" ref_description="SGN-E453407 [cSTS-19-L12]">
      <seq>atcatatatgagatcaatggagatctcttacaacataattatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggttaggcccctacccaattgtgttggtaaaagttctttcatctggttaggcccctacccaattgtgttgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattgaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgttgagaagttaaagcatttgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgaccagcgaagtcatttctcacacagcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62146" stop="65087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62446" g_stop="62742" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62743" i_stop="63208" i_length="466">
            <donor d_prob="0.426" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.59"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63209" g_stop="63249" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="336" r_length="40" r_score="0.585"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63250" i_stop="64341" i_length="1092">
            <donor d_prob="0.000" d_score="0.59"/>
            <acceptor a_prob="0.320" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="557" r_length="221" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.763" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64645" g_stop="64787" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="700" r_length="143" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E453407" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E453407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62446" e_stop="62742"/>
          <exon e_start="63209" e_stop="63249"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATT</genome_strand>
        <mrna_strand>ATCATATATGAGATCAATGGAGATCTCTTACAACATAATTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGG-TTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCTTTCATCTGGTTAGGCCCCTA-CCCAATTGTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGTTAGGCCCCTACCCAATTGTGTTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTGACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTTGAGAAGTTAAAG..................................................................................CATTTGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGACCAGCGAAGTCATTTCTCACACAGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E400089" ref_strand="+" ref_description="SGN-E400089 [cSTC-4-D8]">
      <seq>tatgagatcaatggagatttcttacaacataattatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaattgtgttgatcacgaattctgaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62152" stop="64703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62452" g_stop="62738" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64403" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="349" r_length="62" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E400089" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62452" e_stop="62738"/>
          <exon e_start="64342" e_stop="64403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACAT</genome_strand>
        <mrna_strand>TATGAGATCAATGGAGATTTCTTACAACATAATTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATTGTGTTGATCACGAATTCTGAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465069" ref_strand="+" ref_description="SGN-E465069 [cPRO-20-A21]">
      <seq>ggatcaatggagatttcttacaacataattatagcaacaatttgttttgcacttttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaattgtgttgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattgaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgttgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62157" stop="65040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62456" g_stop="62738" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="504" r_length="221" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64740" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="600" r_length="96" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E465069" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62456" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGG</genome_strand>
        <mrna_strand>GGATCAATGGAGATTTCTTACAACATAATTATAGCAACAATTTGTTTTGCACTTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATTGTGTTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTGACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTTGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E461056" ref_strand="+" ref_description="SGN-E461056 [cPRO-34-M5]">
      <seq>gatcaatggagatttcttacaacataattatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtccaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaattgtgttgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattgaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgaccagcgaagtcatttctcacacagcatttggaagtagctatgaagaaagaagaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgctcaatttatataccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62157" stop="65180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62457" g_stop="62738" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="503" r_length="221" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64881" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="740" r_length="237" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E461056" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62457" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCT</genome_strand>
        <mrna_strand>GATCAATGGAGATTTCTTACAACATAATTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCCAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATTGTGTTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTGACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGACCAGCGAAGTCATTTCTCACACAGCATTTGGAAGTAGCTATGAAGAAAGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGCTCAATTTATATACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464597" ref_strand="+" ref_description="SGN-E464597 [cPRO-18-D1]">
      <seq>gatcaatggagatttcttacaacataattatagcaacaatttgtgttgcaattttgttgttctatacatggaaagtgttgaattgggcatggtttgggccaaaaaaattggaaaattgcttaaggcaaagaggtctaaaaggaaatccatataagctactctatggagatttgaatgagttgacaaaaagtatagttgaagcaaagtccaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaattgtgttgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattgaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagccaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62157" stop="65060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62457" g_stop="62738" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="503" r_length="221" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64760" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="619" r_length="116" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E464597" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62457" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGAC</genome_strand>
        <mrna_strand>GATCAATGGAGATTTCTTACAACATAATTATAGCAACAATTTGTGTTGCAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGGCCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGCTACTCTATGGAGATTTGAATGAGTTGACAAAAAGTATAGTTGAAGCAAAGTCCAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATTGTGTTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTGACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCCAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437913" ref_strand="+" ref_description="SGN-E437913 [cSTA-5-B11]">
      <seq>agttgacaaaaagtatagttgaagcaaagtctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgaccagcgaagtcatttctcgcacagcatttggaagtagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62336" stop="65097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62634" g_stop="62738" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="326" r_length="221" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64797" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="479" r_length="153" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E437913" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62634" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGC</genome_strand>
        <mrna_strand>AGTTGACAAAAAGTATAGTTGAAGCAAAGTCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGACCAGCGAAGTCATTTCTCGCACAGCATTTGGAAGTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459491" ref_strand="+" ref_description="SGN-E459491 [cPRO-28-C15]">
      <seq>tctaagcctatcaatttctctgatgatatagctcaaagactcatcccttttttcctcaactccatcaacaaaaatggtaaaagttctttcatctggctaggcccctacccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgaccagcgaagtcatttctcgcacagcatttggaagtagctatgaagaaggaagaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgctcaatttatatacctggatctaggttcttacctacaaaaagaaacaaaagaatgctggaaattgaaaaggaaattcaaacaacaattaggcgtatcattgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62363" stop="65378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62663" g_stop="62738" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.320" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64562" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="297" r_length="221" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64645" g_stop="64889" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="542" r_length="245" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64999" g_stop="65078" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="622" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E459491" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62663" e_stop="62738"/>
          <exon e_start="64342" e_stop="64562"/>
          <exon e_start="64645" e_stop="64889"/>
          <exon e_start="64999" e_stop="65078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAGGTACGATAATTTATTTATCATATATCGACAATTACCTTTCTTTGTCGTTACATAAGTACAATACAACAGAAGTTGTACTCTGCCTTTCTGCTAAATGACTGTTATATAGGTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACA</genome_strand>
        <mrna_strand>TCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTACCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGACCAGCGAAGTCATTTCTCGCACAGCATTTGGAAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGCTCAATTTATATACCTGGATCTAG.............................................................................................................GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E600353" ref_strand="+" ref_description="SGN-E600353 [53361]">
      <seq>cccaatcgtattgatcacgaatcctgaacatgtaaaggagattttcacaaagaattatgtgtatctaaagcaaactcatcccaatccattcaccaagttattggctaaaggtcttgtaatgcttgaggaggacaaatgggccaaacacagaaaaatcatcaatcctaccttccatgtcgagaagttaaagcatatgctgccagcattttacgtgtgttgtagtgaaatgataagcaaatgggaggagattgttccaaaggaaacatcaaccgagatcgatgtatggccagaccttgaaatgatgaccagcgaagtcatttctcgcacagcatttggaagtagctatgaagaaggaagaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgctcaatttatatacctggatctaggttcttacctacaaaaagaaacaaaagaatgctggaaattgaaaaggaaattcaaacaacaattaggcgtatcattgacaaaagattgagggcaatggaaggaggggagactagtaaagatgacttattaggcatattacttgaatccaatatgaaagaaattgaacaacacggaagcaaagatttcggaatgacaacattgaagtgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64074" stop="65510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64373" g_stop="64562" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64645" g_stop="64889" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="435" r_length="245" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64999" g_stop="65210" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="646" r_length="211" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E600353" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E600353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64373" e_stop="64562"/>
          <exon e_start="64645" e_stop="64889"/>
          <exon e_start="64999" e_stop="65210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAGGTTAATACTTCTTTTTTTTTGTTTTTGTTGAAGTTTTCCGTTAATAACAAACACTGCTGGTTCTCTCATTTGTTTTGTACAGCATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAGGTACGATAATTTATTTATCATATATCGACAATTACCTTTCTTTGTCGTTACATAAGTACAATACAACAGAAGTTGTACTCTGCCTTTCTGCTAAATGACTGTTATATAGGTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTG</genome_strand>
        <mrna_strand>CCCAATCGTATTGATCACGAATCCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTAATGCTTGAGGAGGACAAATGGGCCAAACACAGAAAAATCATCAATCCTACCTTCCATGTCGAGAAGTTAAAG..................................................................................CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGAAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAATGATGACCAGCGAAGTCATTTCTCGCACAGCATTTGGAAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGCTCAATTTATATACCTGGATCTAG.............................................................................................................GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAAAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACA-TTGAAGTGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379500" ref_strand="+" ref_description="SGN-E379500 [TUS-3-E2]">
      <seq>agattgttccaaagggaacatcaaccgagatcgatgtatggccagaccttgaaaagatgaccagtgaagtcatttctcgcacagcatttgggagtagctatgaagaaggaagaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgttcaatttacatacctggatctaggttcttacctacaaaaagaaacaaaagaatgctggaaattgaaaaggaaattcaaacaacaattaggcgtatcattgacaagagattgagggcaatggaaggaggggagactagtaaagatgacttactaggcatattacttgaatccaatatgaaagaaattgaacaacacggaagcaaagatttcggaatgacaacagttgaagtgattgaagagtgcaagttattctattttgctggacaagagaccacttcagtgttgctcgtatggacaatgattttgttgtgcctacatcccgagtggcaagtacgtgccagagaggaggtgttgcaggtatttggaaatgataaaccagatttggaaggactaggtcgcttgaaaatagtgaccatgatcttgtatgagacgctaaggctattccccccattaccacatttggtagaacgaataaagaagaagtgaaattgggggaattaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64400" stop="65980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64700" g_stop="64889" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64999" g_stop="65383" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="575" r_length="385" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65535" g_stop="65680" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="719" r_length="144" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E379500" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64700" e_stop="64889"/>
          <exon e_start="64999" e_stop="65383"/>
          <exon e_start="65535" e_stop="65680"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAGGTACGATAATTTATTTATCATATATCGACAATTACCTTTCTTTGTCGTTACATAAGTACAATACAACAGAAGTTGTACTCTGCCTTTCTGCTAAATGACTGTTATATAGGTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGA</genome_strand>
        <mrna_strand>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG.............................................................................................................GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA.......................................................................................................................................................GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACC-ACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATT-AATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210481" ref_strand="+" ref_description="SGN-E210481 [cLEC-35-K24]">
      <seq>agattgttccaaagggaacatcaaccgagatcgatgtatggccagaccttgaaaagatgaccagtgaagtcatttctcgcacagcatttgggagtagctatgaagaaggaagaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgttcaatttacatacctggatctaggttcttacctacaaaaagaaacaaaagaatgctggaaattgaaaaggaaattcaaacaacaattaggcgtatcattgacaagagattgagggcaatggaaggaggggagactagtaaagatgacttactaggcatattacttgaatccaatatgaaagaaattgaacaacacggaagcaaagatttcggaatgacaacagttgaagtgattgaagagtgcaagttattctattttgctggacaagagaccacttcagtgttgctcgtatggacaatgattttgttgtgcctacatcccgagtggcaagtacgtgccagagaggaggtgttgcaggtatttggaaatgataaaccagatttggaaggactaggtcgcttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64400" stop="65680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64700" g_stop="64889" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64999" g_stop="65380" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="572" r_length="382" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E210481" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64700" e_stop="64889"/>
          <exon e_start="64999" e_stop="65380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAGGTACGATAATTTATTTATCATATATCGACAATTACCTTTCTTTGTCGTTACATAAGTACAATACAACAGAAGTTGTACTCTGCCTTTCTGCTAAATGACTGTTATATAGGTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAA</genome_strand>
        <mrna_strand>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG.............................................................................................................GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212539" ref_strand="+" ref_description="SGN-E212539 [cLEC-74-M14]">
      <seq>agaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgttcaatttacatacctggatctaggttcttacctacaaaaagaaacaaaagaatgctggaaattgaaaaggaaattcaaacaacaattaggcgtatcattgacaagagattgagggcaatggaaggaggggagactagtaaagatgacttactaggcatattacttgaatccaatatgaaagaaattgaacaacacggaagcaaagatttcggaatgacaacagttgaagtgattgaagagtgcaagttattctattttgctggacaagagaccacttcagtgttgctcgtatggacaatgattttgttgtgcctacatcccgagtggcaagtacgtgccagagaggaggtgttgcaggtatttggaaatgataaaccagatttggaaggactaggtcgcttgaaaatagtgaccatgatcttgtatgagacgctaaggctattccccccattaccaacatttggtagaacgaataaagaagaagtgaaattgggggaattaaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttatcccatttggaggagggccgcgaaattgcattggacaaaactttgncatgatggaagcaaaatggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64510" stop="66141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64810" g_stop="64889" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64999" g_stop="65383" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="465" r_length="385" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65535" g_stop="65841" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="771" r_length="306" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E212539" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64810" e_stop="64889"/>
          <exon e_start="64999" e_stop="65383"/>
          <exon e_start="65535" e_stop="65841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAGGTACGATAATTTATTTATCATATATCGACAATTACCTTTCTTTGTCGTTACATAAGTACAATACAACAGAAGTTGTACTCTGCCTTTCTGCTAAATGACTGTTATATAGGTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCAT</genome_strand>
        <mrna_strand>AGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG.............................................................................................................GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA.......................................................................................................................................................GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAAATTGCATTGGACAAAACTTTGNCATGATGGAAGC-AAAATGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603943" ref_strand="-" ref_description="SGN-E603943 [67133]">
      <seq>gttattctattctgcctggacaagaggaccacttcaatgttgctcgtctggacaatgattttcttgtgcttacatccagagtggcaagtacgtgccagagaggagttttgcaggtatttggaaatgataaaccagatttggaaggacttggtcgcttgaaaatagtgaccatggtcttgtacgagacgctaaggctattccccccattaccgacatttggtagaacgaataaagaagaagtgaaattgggagagctaaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttattccatttggtgggggacctcgaatttgcattggacaaaactttgcgatgatggaagcaaaaatggcaatagcaatgatactacaaaggttctcctttgaactctctccatcatatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctctgcttatgcgcaaactctaagatgatattttacaccattggtgttgtatgatcgatactaatttgtcacatgatgactgaagtcatgcttcgaatttaaacgttaacgttaaattgcagcttggttaacattaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64921" stop="100407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65221" g_stop="65383" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65535" g_stop="66074" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="703" r_length="539" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66075" i_stop="66208" i_length="134">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.874" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66209" g_stop="66224" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="704" r_stop="719" r_length="16" r_score="0.625"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E603943" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E603943" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65221" e_stop="65383"/>
          <exon e_start="65535" e_stop="66074"/>
          <exon e_start="66209" e_stop="66224"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTCTATTTTG-CTGGACAAGA-GACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTTTCTATTGCACCTCTATGTTCATTTTGGTTTGTCCATATGTAGGAATCAACCAAAACAA</genome_strand>
        <mrna_strand>GTTATTCTATTCTGCCTGGACAAGAGGACCACTTCAATGTTGCTCGTCTGGACAATGATTTTCTTGTGCTTACATCCAGAGTGGCAAGTACGTGCCAGAGAGGA-GTTTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTTGGTCGCTTGAAAATA.......................................................................................................................................................GTGACCATGGTCTTGTACGAGACGCTAAGGCTATTCCCCCCATTACCGACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGAGAGCTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATTCCATTTGGTGGGGGACCTCGAATTTGCATTGGACAAAACTTTGCGATGATGGAAGCAAAAATGGCAATAGCAATGATACTACAAAGGTTCTCCTTTGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTGGTGTTGTATGATCGATACTAATTTGTCACATGATGACTGAAGTCATGCTTCGAATTTAAACG-TTAACGTTAAATTGCAGCTTGGTTAACATTA......................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427770" ref_strand="-" ref_description="SGN-E427770 [STM-49-G7]">
      <seq>acaatgattttgttgtgcttacatccagagtggcaagtacgtgccagagaggaggtgttgcaggtatttggaaatgataaaccagatttggaaggacttggtcgcttgaaaataatgaccatgatcttgtacgagacgctaaggctattccccccattaccaacatttggtagaacgaataaagaagaagtgaaattgggagagctaaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttattccatttggtgggggacctcgaatttgcattggacaaaactttgcgatgatggaagcaaaaatggcaatagcaatgatactacaaaggttctcctttgaactctctccatcctatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctctgcttatgcgcaaactctaagatgatattttacaccattggtgttgtatgatcgatactaatttgtcacatgatgactgaagtcatgcttcgaatttaaacgttaacgttaaattgcagctttgttaacattatcaaaaaaagttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64970" stop="66380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65270" g_stop="65383" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65535" g_stop="66089" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="668" r_length="554" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E427770" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427770" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65270" e_stop="65383"/>
          <exon e_start="65535" e_stop="66089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGT</genome_strand>
        <mrna_strand>ACAATGATTTTGTTGTGCTTACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTTGGTCGCTTGAAAATA.......................................................................................................................................................ATGACCATGATCTTGTACGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGAGAGCTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATTCCATTTGGTGGGGGACCTCGAATTTGCATTGGACAAAACTTTGCGATGATGGAAGCAAAAATGGCAATAGCAATGATACTACAAAGGTTCTCCTTTGAACTCTCTCCATCCTATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTGGTGTTGTATGATCGATACTAATTTGTCACATGATGACTGAAGTCATGCTTCGAATTTAAACG-TTAACGTTAAATTGCAGCTTTGTTAACATTATCAAAAAAAGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E378866" ref_strand="+" ref_description="SGN-E378866 [TUS-3-E2](-)">
      <seq>tggcaagtacgtgccagagaggaggtgttgcaggtattnggaaatgataaaccagatttggaaggactaggtcgctgnaaaatagtgaccatgatcttgtatgagacgctaaggctattccccccattaccaacatttggtagaacgaataaagaagaagtgaaattgggggaattaaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttatcccatttggaggagggccgcgaatttgcattggacaaaactttgcaatgatggaagcaaaaatggcattagcaatgatactacaaaggttctccttcgaactctctccatcatatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctctgcttatgcgcaaactctaagatgatattttacaccattcgtgttgtattgtcgatactaatttgtcacatgatgtcaagtcatgctttgaatttaaacgtttaacgttaaattgcagcttggttatcattatcaaaatttattggtcatctctgatgaacttcatattgcctcttggtggagcaaaagtttcttcttcttaaaggagtgtagcatatactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="65000" stop="66466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65300" g_stop="65383" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65535" g_stop="66166" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="714" r_length="630" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E378866" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E378866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65300" e_stop="65383"/>
          <exon e_start="65535" e_stop="66166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTT</genome_strand>
        <mrna_strand>TGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTNGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTGNAAAATA.......................................................................................................................................................GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTC--AAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGGAGTGTAGCATATACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E414697" ref_strand="-" ref_description="SGN-E414697 [STM-19-P24]">
      <seq>cgcttgaaaatagtgaccatgatcttgtacgagacgctaaggctattccccccattaccaacatttggtagaacgaataaagaagaagtgaaattgggagagctaaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttattccatttggtgggggacctcgaatttgcattggacaaaactttgcgatgatggaagcaaaaatggcaatagcaatgatactacaaaggttctcctttgaactctctccatcatatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctcttcttatgcgcaaactctaagatgatattttacagcattggtgttgtatgatctatactaatttgtcacatgatgactgaagtcatgcttcaatttaaacgttaacattaaattgcagcttggttaacattatcaaaaaaaaaaaaaaaaaaactccgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="65231" stop="100427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65372" g_stop="65383" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65535" g_stop="66079" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="555" r_length="543" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66080" i_stop="66208" i_length="129">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.874" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66209" g_stop="66241" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="590" r_length="35" r_score="0.515"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E414697" ref_strand="-">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E414697" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65372" e_stop="65383"/>
          <exon e_start="65535" e_stop="66079"/>
          <exon e_start="66209" e_stop="66241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTTTCTATTGCACCTCTATGTTCATTTTGGTTTGTCCATATGTAGGAATCAACCAAAACAACTAC-TG-CTAAGTTTCTA</genome_strand>
        <mrna_strand>CGCTTGAAAATA.......................................................................................................................................................GTGACCATGATCTTGTACGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGAGAGCTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATTCCATTTGGTGGGGGACCTCGAATTTGCATTGGACAAAACTTTGCGATGATGGAAGCAAAAATGGCAATAGCAATGATACTACAAAGGTTCTCCTTTGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTTCTTATGCGCAAACTCTAAGATGATATTTTACAGCATTGGTGTTGTATGATCTATACTAATTTGTCACATGATGACTGAAGTCATGC-TTCAATTTAAACG-TTAACATTAAATTGCAGCTTGGTTAACATTATCAAA.................................................................................................................................AAAAAAAAAAAAAAAACTCCGAGACTAGTTCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309595" ref_strand="+" ref_description="SGN-E309595 [cLEY-26-G18]">
      <seq>tcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttatcccatttggaggagggccgcgaatttgcattggacaaaactttgcaatgatggaagcaaaaatggcattagcaatgatactacaaaggttctccttcgaactctctccatcatatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctctgcttatgcgccaaactctaagatgatattttacaccattcgtgttgtattgtcgatactaatttgtcacatgatgtctgaagtcatgctttgaatttaaacgtttaacgttaaattgcagcttggttatcattatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="65350" stop="66380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65650" g_stop="66086" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="438" r_length="438" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E309595" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65650" e_stop="66086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCG-CAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATT</genome_strand>
        <mrna_strand>TCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413615" ref_strand="+" ref_description="SGN-E413615 [STM-18-M11]">
      <seq>caaatcaaaattgtttttttgagttgacctacaacccttgataatgttaaccaagctgcaatttaacgttaacgtttaaattcaaagcatgacttccgtcatcatgtgacaaattaatatcgatcatacaacaccaatggtgtaaaatatcatcttatagtttgcgcataagcagaggagcaccatactgaggatgaatagaccctactgcaaatggaccatgtgtatatgatggacagagttcaaaggagaacctttgtaggatcattgctattgccatttttgcttccatcatcgcaagagtttgtccaatgcaaattcgaagtcccccaccaaatggaataaacgagaattgtcctttggtggcctttgacactccctcactaaatctttccggattgaattcctttgccccttcaccccatatttccttatcataatgtacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="66378" stop="65368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66094" g_stop="65668" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="447" r_length="426" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E413615" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66094" e_stop="65668"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGACCAATAAATTTTGATAATGATAACCAAGCTGCAATTTAACGTTAAACGTTTAAATTCAAAGCATGACTTCAGACATCATGTGACAAATTAGTATCGACAATACAACACGAATGGTGTAAAATATCATCTTAGAGTTTGCGCATAAGCAGAGGAGCACCATACTGAGGATGAATAGTCACTACTGCAAATGGAGCATGTGTATATGATGGAGAGAGTTCGAAGGAGAACCTTTGTAGTATCATTGCTAATGCCATTTTTGCTTCCATCATTGCAAAGTTTTGTCCAATGCAAATTCGCGGCCCTCCTCCAAATGGGATAAACGAGAATTGTCCTTTGGTTGCCTTTGACACTCCTTCACTAAATCTTTCTGGTTTGAATTCCTTTGCGTCTTCACCCCATATTTCCTTATCATAATGTACTA</genome_strand>
        <mrna_strand>AGTTGACCTACAACCCTTGATAATGTTAACCAAGCTGCAATTTAACGTT-AACGTTTAAATTCAAAGCATGACTTCCGTCATCATGTGACAAATTAATATCGATCATACAACACCAATGGTGTAAAATATCATCTTATAGTTTGCGCATAAGCAGAGGAGCACCATACTGAGGATGAATAGACCCTACTGCAAATGGACCATGTGTATATGATGGACAGAGTTCAAAGGAGAACCTTTGTAGGATCATTGCTATTGCCATTTTTGCTTCCATCATCGCAAGAGTTTGTCCAATGCAAATTCGAAGTCCCCCACCAAATGGAATAAACGAGAATTGTCCTTTGGTGGCCTTTGACACTCCCTCACTAAATCTTTCCGGATTGAATTCCTTTGCCCCTTCACCCCATATTTCCTTATCATAATGTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474294" ref_strand="-" ref_description="SGN-E474294 [cSTB-36-E23]">
      <seq>tggaagcaaaaatggcaatagcaatgatactacaaaggttctcctttgaactctctccatcatatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctcttcttatgcgcaaactctaagatgatattttacagcattggtgttgtatgatctatactaatttgtcacatgatgactgaagtcatgcttcaatttaaacgttaacattaaattgcagcttggttaacattatcaaaaaaaaaaaaaaaaaaactccgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="65524" stop="100427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65824" g_stop="66079" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66080" i_stop="66208" i_length="129">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.874" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66209" g_stop="66241" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="289" r_length="35" r_score="0.515"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E474294" ref_strand="-">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>289</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474294" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65824" e_stop="66079"/>
          <exon e_start="66209" e_stop="66241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTTTCTATTGCACCTCTATGTTCATTTTGGTTTGTCCATATGTAGGAATCAACCAAAACAACTAC-TG-CTAAGTTTCTA</genome_strand>
        <mrna_strand>TGGAAGCAAAAATGGCAATAGCAATGATACTACAAAGGTTCTCCTTTGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTTCTTATGCGCAAACTCTAAGATGATATTTTACAGCATTGGTGTTGTATGATCTATACTAATTTGTCACATGATGACTGAAGTCATGC-TTCAATTTAAACG-TTAACATTAAATTGCAGCTTGGTTAACATTATCAAA.................................................................................................................................AAAAAAAAAAAAAAAACTCCGAGACTAGTTCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591134" ref_strand="+" ref_description="SGN-E591134 [44839]">
      <seq>ttttgatttatggtcatttttgtattacaagtaagaggaagcagttgagagaagctttgtgatttgtgaaaatggagatgtggagcaacataatagcaacaatatgtgttgcaattttattaatttatacatggaaggtgttaaattgggcatggtttagaccaaagaaattggagaaatactttagacaaaatggtctaaaaggaaatccatacaagttactctatggagatttgaatgaactcacaaaaagtatagtagaagccaaatctaagcctatcaatttctctgatgatatagctcaacaggctcatcccctttttccttgactccatcaacaaaaatggtaaaagttcttttatgtggttaggcccatatccagttatattgatcacagatcctgaacatttaaaggagattttcacaaagaattatgtgtatctaaagcaaaatcatcccaatccaatgaccaagttattggctcaaggtctagcaaacattgagggagacaaatgggccaaacacagaaaaatcatcaatcccgtcttccacgtagagaagttaaagcatatgctgccggcattttatatgagttgtagtgaaatgctaagcaaatgggaggaatttgttccaacgggaacatcattcgaactcgatgtatggccagaccttcaaataatgagtagtgaagtcatatctcgtacagcatttgggagtagctatgaacgaaggaagaacagtatttgaacttcagaaaagaaccaagctgagtatgtaattcgaaaaaggacaatcaatttatatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="67419" stop="69796"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67718" g_stop="68062" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68063" i_stop="68503" i_length="441">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68504" g_stop="68724" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="567" r_length="221" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68725" i_stop="69260" i_length="536">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.841" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69261" g_stop="69496" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="807" r_length="240" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E591134" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E591134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67718" e_stop="68062"/>
          <exon e_start="68504" e_stop="68724"/>
          <exon e_start="69261" e_stop="69496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGACTTGTGATAATTTTTGTATAGCAAGTAAGATGAAG-AGCTGAGAGAAGCTTTGTGACTTTGTGAAAATGGAGATGTTGAGCAAAATAATAGCAACAATATGTGTTGCAATTTTATTAATTTGTACATGGAAAGTGTTGAATTGGGCATGGTTTAGACCAAAGAAATTGGAGAAATACTTTATACAAAATGGTCTAAAAGGAAAACCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAATCTAAGCCTATCAATTTCTCTGATGATATAGCTCAA-AGACTCATCCCCTTTTTCCTTGACTCCATCAACAAAAATGGTAAGTTTCTTAGTTACAAAGATTTTGTGTAATGCGTACCAAGTGTTTGGTAAAATGCCTGAATGAACTTTTGATGAAGTTGTGAAATGTTTATTCCTTATTTTTTTTTTATAATTGTGGTATTCAGATCAGTTTTCGTACACCTCCACTAGTTTGTCCACTGAAGTTAGGTCAGATAGGAAGAATCATGTAGTGTTGTTGTCTCTGTTAGGATTGAACCTGAGATCTCATGACTTTCAATTATTTACTTCATTAATGTTGAGAATGTAATCGAATAATTATGTTTTTAGATGAGATGCTCACACGCTTTAACAATCAAACACTAGGCTAAATCATTGGGCGCGTGAAATGCCTTTTCCTTCTTTGTGAATTTCATCAGTGATTTTGTTGTTTTTGTGGAAAAAACAATAAATCATAGCGATAACTAAGAGATACTTGCAGGTAAAAGTTCTTTTATGTGGCTAGGCCCATATCCAGTTATATTGATCACAGATCCTGAACATGTAAAGGAGATTTTCACTAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCAATGACCAAGTTATTGGCTCAGGGTCTAGCAAACATCGAGGGAGACAAATGGGCCAAACATAGAAAAATCATCAATCCCGTCTTCCACGTCGAGAAGTTAAAGGTTCTACTTTATTACTCCATTATTTTCAACGTGATTTCGTCATTACTGTATTGCTTTTTCAAACCAGTTTTGAATTGTTATACTTGACCTTTCTACCTGTACTAGGTAGGGTTAAGGTCTATGCACACACCACCCTTTTCAGATCTCACTTGTGAACTTATACTGGATATGTTATTGTTATTGTAGTTTGATCAGGCACGAGTGATGTTTAAGAAAATAAGGGAGTCTTTAGAATCTTGTTGTCTTAAACTAAAGATGTGTACAATGTAGCAAAGTATGTTTTGAATCTTGTGGTCTAAATATTCCGTGTGGGATATTGGAGTTAAAAAGAATTACTAGATATAGAAAGTGACGTTCTTTTTTAAAGAGACTTAGAAGGGAAGTGAGACAACTAATTGAATCAAAGAGAGAACCATATTTAGATAAAACAGTAAATTTTATATGCCTTTGGCTTAGTATTGCTTATTTAGCTGCATTAATTAACATTAAGAAGTTATCAATTGATAACAAGTACTTGCTGGTTTTTTGATATACAGCATATGCTGCCGGCATTTTATATGAGTTGTAGTGAAATGCTAAGCAAATGGGAGGAAATTGTTCCAACGGGAACATCATTCGAACTCGATGTTTGGCCAGACCTTCAAATAATGACTAGTGAAGTCATATCTCGTACAGCATTTGGGAGTAGCTATGAA-GAAGGAAGAACGGTATTCGAACTTCAG-AAAGAA-CAAGCTGAGTATGTAA-TCGAAAAAGGACAATCAATTTATATACC</genome_strand>
        <mrna_strand>TTTTGATTTATGGTCATTTTTGTATTACAAGTAAGAGGAAGCAGTTGAGAGAAGCTTTGTGA-TTTGTGAAAATGGAGATGTGGAGCAACATAATAGCAACAATATGTGTTGCAATTTTATTAATTTATACATGGAAGGTGTTAAATTGGGCATGGTTTAGACCAAAGAAATTGGAGAAATACTTTAGACAAAATGGTCTAAAAGGAAATCCATACAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTAGAAGCCAAATCTAAGCCTATCAATTTCTCTGATGATATAGCTCAACAGGCTCATCCCCTTTTTCCTTGACTCCATCAACAAAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTTATGTGGTTAGGCCCATATCCAGTTATATTGATCACAGATCCTGAACATTTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAAATCATCCCAATCCAATGACCAAGTTATTGGCTCAAGGTCTAGCAAACATTGAGGGAGACAAATGGGCCAAACACAGAAAAATCATCAATCCCGTCTTCCACGTAGAGAAGTTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATGCTGCCGGCATTTTATATGAGTTGTAGTGAAATGCTAAGCAAATGGGAGGAATTTGTTCCAACGGGAACATCATTCGAACTCGATGTATGGCCAGACCTTCAAATAATGAGTAGTGAAGTCATATCTCGTACAGCATTTGGGAGTAGCTATGAACGAAGGAAGAACAGTATTTGAACTTCAGAAAAGAACCAAGCTGAGTATGTAATTCGAAAAAGGACAATCAATTTATATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575857" ref_strand="+" ref_description="SGN-E575857 [35546]">
      <seq>gtgatttgtgaaaatggagatgtggagcaacataatagcaacaatatgtgttgcaattttattaatttatacatggaaggtgttaaattgggcatggtttagaccaaagaaattggagaaatactttagacaaaatggtctaaaaggaaatccatacaagttactctatggagatttgaatgaactcacaaaaagtatagtagaagccaaatccaagcctatcaatttctctgatgatatagctcaaaggctcatcccctttttccttgactccatcaacaaaaatggtaaaagttcttttatgtggttaggcccatatccagttatattgatcacagatcctgaacatttaaaggagattttcacaaagaattatgtgtatctaaagcaaaatcatcccaatccaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="67475" stop="68925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67775" g_stop="68062" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68063" i_stop="68503" i_length="441">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68504" g_stop="68625" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="409" r_length="122" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E575857" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E575857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67775" e_stop="68062"/>
          <exon e_start="68504" e_stop="68625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGACTTTGTGAAAATGGAGATGTTGAGCAAAATAATAGCAACAATATGTGTTGCAATTTTATTAATTTGTACATGGAAAGTGTTGAATTGGGCATGGTTTAGACCAAAGAAATTGGAGAAATACTTTATACAAAATGGTCTAAAAGGAAAACCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAATCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCCTTTTTCCTTGACTCCATCAACAAAAATGGTAAGTTTCTTAGTTACAAAGATTTTGTGTAATGCGTACCAAGTGTTTGGTAAAATGCCTGAATGAACTTTTGATGAAGTTGTGAAATGTTTATTCCTTATTTTTTTTTTATAATTGTGGTATTCAGATCAGTTTTCGTACACCTCCACTAGTTTGTCCACTGAAGTTAGGTCAGATAGGAAGAATCATGTAGTGTTGTTGTCTCTGTTAGGATTGAACCTGAGATCTCATGACTTTCAATTATTTACTTCATTAATGTTGAGAATGTAATCGAATAATTATGTTTTTAGATGAGATGCTCACACGCTTTAACAATCAAACACTAGGCTAAATCATTGGGCGCGTGAAATGCCTTTTCCTTCTTTGTGAATTTCATCAGTGATTTTGTTGTTTTTGTGGAAAAAACAATAAATCATAGCGATAACTAAGAGATACTTGCAGGTAAAAGTTCTTTTATGTGGCTAGGCCCATATCCAGTTATATTGATCACAGATCCTGAACATGTAAAGGAGATTTTCACTAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCAATG</genome_strand>
        <mrna_strand>GTGA-TTTGTGAAAATGGAGATGTGGAGCAACATAATAGCAACAATATGTGTTGCAATTTTATTAATTTATACATGGAAGGTGTTAAATTGGGCATGGTTTAGACCAAAGAAATTGGAGAAATACTTTAGACAAAATGGTCTAAAAGGAAATCCATACAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTAGAAGCCAAATCCAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGGCTCATCCCCTTTTTCCTTGACTCCATCAACAAAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTTATGTGGTTAGGCCCATATCCAGTTATATTGATCACAGATCCTGAACATTTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAAATCATCCCAATCCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470894" ref_strand="+" ref_description="SGN-E470894 [cSTB-21-K21]">
      <seq>aacatgtaaaagagattttcacaaagaattatgtgtatgtaaagcagcgtcatgccaatccaatgaccaagttattggctggcggtctatcaaccattgatggagacaaatgggccaaacacagaaaaatcatcaatcccgtgttccatgttgagaagttaaagcatatgatgccagcattttatgtgagttgtagtgaaatgctacgcaaatgggaggaaattgttccaaagggaacatcattcgaactcgatgtatggccagaccttcaaataatggctagtgaagtcatatctcgtacagcatttgggagtagctatgaagaaggaagaacagtatttgaacttcagaaagaacaagctgagtatgtaatcgaaaaaggacgatcaatttatataccaggatctaggttcttgcctactaaaaggaacaaaagaatgctggaaatcgaaaagcaagtccaaacaacgatcaggcgtatcatcgacaaaagattgagggcaatggaagcaggggagcctagtaaagatgacttattatgcatattacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="68261" stop="111868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68561" g_stop="68724" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68725" i_stop="69260" i_length="536">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.841" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69261" g_stop="69505" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="409" r_length="245" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69506" i_stop="69649" i_length="144">
            <donor d_prob="0.974" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69650" g_stop="69792" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="552" r_length="143" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E470894" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68561" e_stop="68724"/>
          <exon e_start="69261" e_stop="69505"/>
          <exon e_start="69650" e_stop="69792"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATGTAAAGGAGATTTTCACTAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCAATGACCAAGTTATTGGCTCAGGGTCTAGCAAACATCGAGGGAGACAAATGGGCCAAACATAGAAAAATCATCAATCCCGTCTTCCACGTCGAGAAGTTAAAGGTTCTACTTTATTACTCCATTATTTTCAACGTGATTTCGTCATTACTGTATTGCTTTTTCAAACCAGTTTTGAATTGTTATACTTGACCTTTCTACCTGTACTAGGTAGGGTTAAGGTCTATGCACACACCACCCTTTTCAGATCTCACTTGTGAACTTATACTGGATATGTTATTGTTATTGTAGTTTGATCAGGCACGAGTGATGTTTAAGAAAATAAGGGAGTCTTTAGAATCTTGTTGTCTTAAACTAAAGATGTGTACAATGTAGCAAAGTATGTTTTGAATCTTGTGGTCTAAATATTCCGTGTGGGATATTGGAGTTAAAAAGAATTACTAGATATAGAAAGTGACGTTCTTTTTTAAAGAGACTTAGAAGGGAAGTGAGACAACTAATTGAATCAAAGAGAGAACCATATTTAGATAAAACAGTAAATTTTATATGCCTTTGGCTTAGTATTGCTTATTTAGCTGCATTAATTAACATTAAGAAGTTATCAATTGATAACAAGTACTTGCTGGTTTTTTGATATACAGCATATGCTGCCGGCATTTTATATGAGTTGTAGTGAAATGCTAAGCAAATGGGAGGAAATTGTTCCAACGGGAACATCATTCGAACTCGATGTTTGGCCAGACCTTCAAATAATGACTAGTGAAGTCATATCTCGTACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAACGGTATTCGAACTTCAGAAAGAACAAGCTGAGTATGTAATCGAAAAAGGACAATCAATTTATATACCAGGATCAAGGTACAACAATTTATGTACATCACATTTCCACGTTCAAAACTTTCTTTTGTGCTTGCAAAATCTCTGTGTAATTAAATATGAAAAAACTTCTTAACAATTATTCTACTAATAGACTTTTCTGTTTGAATAAATTTGTTTATACAGGTTCTTGCCTACTAAAAGGAACAAAAGAATGCTGGAAATCGAAAAGGAAATTCAAACCACAATTAGGTGTATCATTGACAAAAGATTGAGGGCAATGGAAGCAGGGGACACCAGTAAAGATGACCTATTGGGCATATTACTCG</genome_strand>
        <mrna_strand>AACATGTAAAAGAGATTTTCACAAAGAATTATGTGTATGTAAAGCAGCGTCATGCCAATCCAATGACCAAGTTATTGGCTGGCGGTCTATCAACCATTGATGGAGACAAATGGGCCAAACACAGAAAAATCATCAATCCCGTGTTCCATGTTGAGAAGTTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATGATGCCAGCATTTTATGTGAGTTGTAGTGAAATGCTACGCAAATGGGAGGAAATTGTTCCAAAGGGAACATCATTCGAACTCGATGTATGGCCAGACCTTCAAATAATGGCTAGTGAAGTCATATCTCGTACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAACAGTATTTGAACTTCAGAAAGAACAAGCTGAGTATGTAATCGAAAAAGGACGATCAATTTATATACCAGGATCTAG................................................................................................................................................GTTCTTGCCTACTAAAAGGAACAAAAGAATGCTGGAAATCGAAAAGCAAGTCCAAACAACGATCAGGCGTATCATCGACAAAAGATTGAGGGCAATGGAAGCAGGGGAGCCTAGTAAAGATGACTTATTATGCATATTACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E539761" ref_strand="+" ref_description="SGN-E539761 [TUS-59-K24]">
      <seq>tacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggttgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgctatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="84060" stop="85308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84360" g_stop="85008" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E539761" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84360" e_stop="85008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTATAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</genome_strand>
        <mrna_strand>TACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E284788" ref_strand="+" ref_description="SGN-E284788 [cLES-3-F2]">
      <seq>acgttagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggtcaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggctgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgatatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagtcttcggggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="84061" stop="85045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84361" g_stop="84745" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E284788" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84361" e_stop="84745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAA</genome_strand>
        <mrna_strand>ACGTTAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGTCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGCTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGATATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGTCTTCGGGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343338" ref_strand="+" ref_description="SGN-E343338 [cTOF-17-N22]">
      <seq>gtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="84719" stop="86126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85019" g_stop="85826" g_length="808"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E343338" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85019" e_stop="85826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699609" ref_strand="+" ref_description="SGN-E699609 [FA10CF12]">
      <seq>cgttctttagagaagcctttttattaacttcatatggagtacttatcacttgtggaagtagagatgatagcaacaatttgtgttgcaattttgttagtaatatacacatggaaagtgttgaattgggcatggtttaggccaaagaaatttgagaaatacttaagaaaaagtggtcttaatggaaatccatacaaattactctatggagatttgaaggaactcacaaataaactcaatgaagccaagtctaagcccatcagtttctctggtgatgtacctcaaaggctcatcccttttttctgtgactccatcaacaaaaatggtaaaaattcttttgcctggctaggtcccaagcctatagtattcatcacagaaccttcacttataaagaaaatttttgaaaaacattatgtatatcacaagaataagcattctaatccattcgcgaagttattggttcaaggtctcgttacccttgaggaacagaaatgggctaagcatagaaaaatcatcaatcccgccttccattttgagaaactaaagcatatggttccagcattttatcagagttgtagcgaaatgctaaggaaatgggaggaggctgttccaaaggaaacatcagccgagctcgatgtatggccacattttcaactaatgaccggtgatgtcatttctcgaactgcatttgggagtagctatgaagaagggagaataatatttgaacttccaaaagaacaacctgagtatgtaatgggacaaattttttcgatttatataccaggggtcgaggtacctacaatattaaactatttgatcaaatttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="87877" stop="89876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88176" g_stop="88497" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88498" i_stop="88982" i_length="485">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88983" g_stop="89203" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="543" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89204" i_stop="89297" i_length="94">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89298" g_stop="89577" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="824" r_length="281" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E699609" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88176" e_stop="88497"/>
          <exon e_start="88983" e_stop="89203"/>
          <exon e_start="89298" e_stop="89577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTACTTTAGAGAAGCCTTTTTATTAACTTCATATGGAGTACTTATCACTTGTGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATGGTAAGTACAACAAACTACCAAGTTTGTTTAATCATATTCTTTTTCATGGACCAATCGTATAGTTTTTGATTTTTATACACGACTTGAATTCAGGATCTTTGTCTGATCTAATATCATGTTTAAATGTGTGAAGATAGTCCACTAGCGGTCATTTCTAGCTCGAATAATGTAATTTTGGGAGGAGTTCCGCAGTTCATATTTAGAATGTGTGATGCTAGGTTGGGGTTTGGTGAACCAACTAGTCGCTCCTCTAGTTGAAGTACCGTGACATAGTATAATTGAGTTTACGAATTCCGTATTCTTGAAAAAGCAGATTATTGAGTTCTTGATAAACTATTGATACGTATTAAATAGATTTTTAAACACAAATATAGAGTTTGAACTAAAGCTAGTACTAGTTTTGTTGAAACCGGTAGGCGATATGATCACTTACAATCTGTTTTAGTATAAGCTTTACTAACACAAAACTGATAAATACTCTGCAGGTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATCCCGCCTTCCATTTTGAGAAACTAAAGGTTTATACATACTACTATATCTTTTTGTTTTTGCGTATAGCTAGTATATAGAACTCAGTGATCATGAATGAAATTAACTTTGTCTGCGTAACAGCATATGGTTCCAGCATTTTATCAGAGTTGTAGCGAAATGCTAAGGAAATGGGAGGAGGCTGTTCCAAAGGAAACATCAGCCGAGCTCGATGTATGGCCACATTTTCAACTAATGACCGGTGATGTCATTTCTCGAACTGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAATATTTGAACTTCAAAAAGAACAAGCTGAGTATGTAATGGAACAAATTTTTTCGATTTATATACCA-GGGTCGAGGTACGTACAATATTAAACTATTTGATCAAATTTCT</genome_strand>
        <mrna_strand>CGTTCTTTAGAGAAGCCTTTTTATTAACTTCATATGGAGTACTTATCACTTGTGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATCCCGCCTTCCATTTTGAGAAACTAAAG..............................................................................................CATATGGTTCCAGCATTTTATCAGAGTTGTAGCGAAATGCTAAGGAAATGGGAGGAGGCTGTTCCAAAGGAAACATCAGCCGAGCTCGATGTATGGCCACATTTTCAACTAATGACCGGTGATGTCATTTCTCGAACTGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAATATTTGAACTTCCAAAAGAACAACCTGAGTATGTAATGGGACAAATTTTTTCGATTTATATACCAGGGGTCGAGGTACCTACAATATTAAACTATTTGATCAAATTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E442427" ref_strand="+" ref_description="SGN-E442427 [cSTA-33-O2]">
      <seq>tgggagtagagatgatagcaacaacttgtgttgcaatttggttagtaatttacacatggaaagtgttgaattgggcatggtttaggccaaaaaacttgagaaatacttgagaaagagtggtcttaagggaaatccatacaaattactctatggagatttgaaagagcttacaaataaactcaatgaagccaaatctaagcccatcaatttctctgatgatgtacctcaaaggctcatcccttttttctgtgactccatcaataaaaatggtaaaaattcttttgcctggctaggccccaagcctatagtattcatcacagaaccttcacttataaagataatttttgaaaaacattatgtatatcacaagaataagcattctaatccattcgcgaagttattggttcaaggtctcgttacccttgaggaacagaaatgggctaagcatagaaaaatcatcaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="87928" stop="89477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88228" g_stop="88497" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88498" i_stop="88982" i_length="485">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88983" g_stop="89177" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="464" r_length="195" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E442427" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E442427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88228" e_stop="88497"/>
          <exon e_start="88983" e_stop="89177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATGGTAAGTACAACAAACTACCAAGTTTGTTTAATCATATTCTTTTTCATGGACCAATCGTATAGTTTTTGATTTTTATACACGACTTGAATTCAGGATCTTTGTCTGATCTAATATCATGTTTAAATGTGTGAAGATAGTCCACTAGCGGTCATTTCTAGCTCGAATAATGTAATTTTGGGAGGAGTTCCGCAGTTCATATTTAGAATGTGTGATGCTAGGTTGGGGTTTGGTGAACCAACTAGTCGCTCCTCTAGTTGAAGTACCGTGACATAGTATAATTGAGTTTACGAATTCCGTATTCTTGAAAAAGCAGATTATTGAGTTCTTGATAAACTATTGATACGTATTAAATAGATTTTTAAACACAAATATAGAGTTTGAACTAAAGCTAGTACTAGTTTTGTTGAAACCGGTAGGCGATATGATCACTTACAATCTGTTTTAGTATAAGCTTTACTAACACAAAACTGATAAATACTCTGCAGGTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATC</genome_strand>
        <mrna_strand>TGGGAGTAGAGATGATAGCAACAACTTGTGTTGCAATTTGGTTAGTAATTTACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAA-AAACTTGAGAAATACTTGAGAAAGAGTGGTCTTAAGGGAAATCCATACAAATTACTCTATGGAGATTTGAAAGAGCTTACAAATAAACTCAATGAAGCCAAATCTAAGCCCATCAATTTCTCTGATGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAATAAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAATTCTTTTGCCTGGCTAGGCCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGATAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432862" ref_strand="+" ref_description="SGN-E432862 [STM-57-N5]">
      <seq>tctacagtgcaagttgttctaatttgctggacaagataccacttcagtgttgctcgtatggacgatgatattactgagcctacatccagagtggcaagtacgtgccagagaggaggttttgaatgtattcagaaatgagaaaccacattttgaaggactaagtcgcctcaaaattgtgacaatgatcttgtacgagacgttaaggctattccccccagcactgatatatggtagaaggaacaaagatgaagtcaaattgggtgagctgagtctaccagctgaagtactactcgttatacccgcaatcttagtacattataacaaggaattatggggtgaagacgcgaaggaattcaaacctgaaagattcagtgaaggagtgtcaaaggcaataaatggacaagtctcgtttattccatttggttggggaccccgaatttgcattggacaaaactttgcaatgatggaagcaaagatgactatagcaatgatactacaaaagttcaccttcgaactctctccatcatatacacatgctccagttgaagttgaagtagtcactattcatccacagtatggtgctcctctgcttatgcgcaaacttaaaaatgttgtagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="89541" stop="112622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89841" g_stop="90016" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79">
            <donor d_prob="0.986" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90096" g_stop="90534" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="619" r_length="444" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E432862" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E432862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89841" e_stop="90016"/>
          <exon e_start="90096" e_stop="90534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACGAGTGCAAGTTATTCTATTTTGCCGGGCAAGATACCACTTCAGTGTTGCTCGTATGGACGATGATATTACTGTGCCAACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTATTGAATGTATTCGGAAATGAAAAACCAGATTTTGAAGGACTAAGTCGCCTCAAAATTGTAAGTACGTTTAACAATTTCTCTCATTAGTGCACTAATTCTAATGCCAACTTATGTTATACATGTTTGTTTTTCTTAGGTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACATGCTCCAGTTGCAG-T--AGT-GT--CTATTCATCCTCAGTATGGTGCTCCTCTGCATATGCGCAAACTTTAAGACTATTTACGGT</genome_strand>
        <mrna_strand>TCTAC-AGTGCAAGTTGTTCTAATTTGCTGGACAAGATACCACTTCAGTGTTGCTCGTATGGACGATGATATTACTGAGCCTACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTTTTGAATGTATTCAGAAATGAGAAACCACATTTTGAAGGACTAAGTCGCCTCAAAATT...............................................................................GTGACAATGATCTTGTACGAGACGTTAAGGCTATTCCCCCCAGCACTGATATATGGTAGAAGGAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTACCAGCTGAAGTACTACTCGTTATACCCGCAATCTTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCTGAAAGATTCAGTGAAGGAGTGTCAAAGGCAATAAATGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAGATGACTATAGCAATGATACTACAAAAGTTCACCTTCGAACTCTCTCCATCATATACACATGCTCCAGTTGAAGTTGAAGTAGTCACTATTCATCCACAGTATGGTGCTCCTCTGCTTATGCGCAAAC-TTAAAAATGTTGTAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E402461" ref_strand="+" ref_description="SGN-E402461 [PPC-7-F6]">
      <seq>tcaaagagtgcaagttgttctaatttgctggacaagataccacttcagtgttgctcgtatggacgatgatattactgagcctacatccagagtggcaagtacgtgccagagaggaggttttgaatgtattcagaaatgagaaaccacattttgaaggactaagtcgcctcaaaattgtgacaatgatcttgtacgagacgttaaggctattccccccagcactgatatatggtagaaggaacaaagatgaagtcaaattgggtgagctgagtctaccagctgaagtactactcgttatacccgcaatcttagtacattataacaaggaattatggggtgaagacgcgaaggaattcaaacctgaaagattcagtgaaggagtgtcaaaggcaataaatggacaagtctcgtttattccatttggttggggaccccgaatttgcattggacaaaactttgcaatgatggaaagcaagatgactatagcaatgatactacaaaagttcaccttcgaactctctccatcatatacacatgctccagttgaagttgaagtaatcactattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="89541" stop="90771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89841" g_stop="90016" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="176" r_length="176" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79">
            <donor d_prob="0.986" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90096" g_stop="90455" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="536" r_length="360" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E402461" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E402461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89841" e_stop="90016"/>
          <exon e_start="90096" e_stop="90455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACGAGTGCAAGTTATTCTATTTTGCCGGGCAAGATACCACTTCAGTGTTGCTCGTATGGACGATGATATTACTGTGCCAACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTATTGAATGTATTCGGAAATGAAAAACCAGATTTTGAAGGACTAAGTCGCCTCAAAATTGTAAGTACGTTTAACAATTTCTCTCATTAGTGCACTAATTCTAATGCCAACTTATGTTATACATGTTTGTTTTTCTTAGGTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACAT</genome_strand>
        <mrna_strand>TCAAAGAGTGCAAGTTGTTCTAATTTGCTGGACAAGATACCACTTCAGTGTTGCTCGTATGGACGATGATATTACTGAGCCTACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTTTTGAATGTATTCAGAAATGAGAAACCACATTTTGAAGGACTAAGTCGCCTCAAAATT...............................................................................GTGACAATGATCTTGTACGAGACGTTAAGGCTATTCCCCCCAGCACTGATATATGGTAGAAGGAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTACCAGCTGAAGTACTACTCGTTATACCCGCAATCTTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCTGAAAGATTCAGTGAAGGAGTGTCAAAGGCAATAAATGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAAGCAAGATGACTATAGCAATGATACTACAAAAGTTCACCTTCGAACTCTCTCCATCATATACACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353442" ref_strand="+" ref_description="SGN-E353442 [cTOS-15-L22]">
      <seq>taagtcgcctcaaaattgtgactatgatcttgtacgagacgttaaggctgttcccccccgcactgttatatggtagaacaaacaaagatgaagtcaaattgggtgagctgagtctgccagctgaagtactactcattatacccgcaatcctagtacattataacaaggaattatggggtgaagacgcgaaggaattcaaaccagatcgattcagtgaaggagtgtcaaaggcaacaaacggacaagtctcgtttattccatttggttggggaccccgaatttgcatcggacaaaactttgtaatgacggaagcaaagatgacaatagcaatgatcctacagaagttctcgtttgaactctctccatcataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="89700" stop="100407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90000" g_stop="90016" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90096" g_stop="90455" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="377" r_length="360" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90456" i_stop="91261" i_length="806">
            <donor d_prob="0.925" d_score="0.92"/>
            <acceptor a_prob="0.601" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91262" g_stop="91271" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="387" r_length="10" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E353442" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90000" e_stop="90016"/>
          <exon e_start="90096" e_stop="90455"/>
          <exon e_start="91262" e_stop="91271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTCGCCTCAAAATTGTAAGTACGTTTAACAATTTCTCTCATTAGTGCACTAATTCTAATGCCAACTTATGTTATACATGTTTGTTTTTCTTAGGTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACATGCTCCAGTTGCAGTAGTGTCTATTCATCCTCAGTATGGTGCTCCTCTGCATATGCGCAAACTTTAAGACTATTTACGGTCATTTGCATTGTACGTGTTGGGAAAGACAAGGCACTAATAAAGAATGTCTGACAGGATAACAACGGAAGAATACCCAAGTCTATACTTTCCCTTTTCGATTTGAACCAAGATAAAACAAACAACCACAAGCAATATGATAGTAAGGCAGCAAGTAATTCAACCAAACAAATATAACAAGACAATAATAAACCAATCACACAAGACACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGCCAAACAACGAGCAACAACAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTAAAAAATCTGAAAATAAGACCTAAAATAGGCTTATATTTGCCTCATAAGAATGGGCTTATGGACAAAAATGGGTTGGTCCAAATTGGGCTTTTATTTATCCACATAGGAAGGGAAAA</genome_strand>
        <mrna_strand>TAAGTCGCCTCAAAATT...............................................................................GTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E380017" ref_strand="+" ref_description="SGN-E380017 [TUS-1-D13](-)">
      <seq>catcaagatttacgtggaaaccccttcgatgtgaagagtaaaaaaccacgggtccaaaagctccactataatcaccaagagttacaatattgttctccaaaattggccacaaaacaaagtgtcaaacaacgagcaacaacaaaataagattgctccaaatctagagaattaaaggagcaaaatcaccaatttcgcagctactgttcacgacagcaaaactgaagctgcagaccaccaaatccaactctgtcagttcctaatcaaagattgagatgaagataatatgctgtccaaaaatcagctcaatcggacaagaaacgaagcgggaatcgcaatttgaagttggttgttatggctggatttttgactgcgaatttctctcttttttctctcttttagctgctgaaaaactctctctgaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="90439" stop="91454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90739" g_stop="91163" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E380017" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E380017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90739" e_stop="91163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGCCAAACAACGAGCAACAACAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTAAAAAATCT</genome_strand>
        <mrna_strand>CATCAAGATTTACGTGGAAACCCCTTCGATGTGAAGAGTAAAAAACCACGGGTCCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGTCAAACAACGAGCAACAACAAAATAAGATTGCTCCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTAGCTGCTGAAAAACTCTCTCTGAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431149" ref_strand="+" ref_description="SGN-E431149 [STM-55-A17]">
      <seq>agcagctagaaagaagactcttattactttcatggagatttcttacaacataactatagcagcaatttgtgttgcaattttgttgttatatacatggagagtgttgaattgggcatggtttaagccaaagaaacttgagaaatacttaagaaaaagtggtctaaagggaaatccatacaaattactctatggagattcgaaggaactcacaaataaactcaatgaagctagatctaagcccatcaatttttctgatgatatagctcaaaggctcatcccttttttccttgactccatcaacaaaaatggtaaaagttcttttgtgtggctaggcccatatccaatagtgttgatcacagatcctgaacatgtaaaagagattttcacaaagaattatgggtatcaaaagcaagctcatcccaatccattcgccaagttatttgctataggtcttgcgttgcttgaggaagacaaatggaccaaacacagaaaaatcatcaatcctgcttttcatgttgagaagttaaagcatatgttgccagcgttttatcaaagctgtagtgaaatgataagcaaatgggaggatattgttccaaaggaaacatcagtcgatctcgatgtatggccagaccttcaattaatgacaggtgaagtcatttctcgaaccgcatttgggagtagctatgaagaagggagaatagtatttgaacttcagaaagacaagctgagtatgtaattgacataactcgttcagtttatataccangatcaaggttcttgcctacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="100182" stop="98597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99882" g_stop="99575" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99574" i_stop="99460" i_length="115">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99459" g_stop="99239" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="529" r_length="221" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99238" i_stop="99144" i_length="95">
            <donor d_prob="0.986" d_score="0.90"/>
            <acceptor a_prob="0.779" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99143" g_stop="98899" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="773" r_length="244" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98898" i_stop="98798" i_length="101">
            <donor d_prob="0.937" d_score="0.92"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98797" g_stop="98784" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="787" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E431149" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99882" e_stop="99575"/>
          <exon e_start="99459" e_stop="99239"/>
          <exon e_start="99143" e_stop="98899"/>
          <exon e_start="98797" e_stop="98784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGGTAGAAAGAAGAGTCTTATTAACTTCATGGAGATTCCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAACTTGAAAAATACTTAAGAAAGAGTGGTCTCAAGGGAAATCCATACAAATTATTCTATGGCGATTTGAACGAAATCACAAATAAAGTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGATTCCATCAACAAAAATGGTATGTTTCGTTGTCCTTAAATCGATCTTACTTGATCAAATTTGAGCGTCTATTTATATTATGCCTTTTGTTTTGTTTTTTATATTTTTCCTAATCGAAAACGGATTACTCTCAGGTAAAAGGTCTTTTGTGTGGCTAGGCCCAAATCCAGCAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGCGTATCAAAAGATACCTCATCCCAATCCATTTGCAAACTCATTCGCTAAAGGTCTTGCGTTTCTTGAGGAAGACAAATGGACCAAACATCGAAAAATCATCAATCCTGCTTTCCATTTTGAGAAGTTTAAGGTTATTTTTATTTACTTCATAGTCTTATTACGCGAACATGAAGCTCTATTACTGATAACTAGTACTGGTTTTTGCGATTAATTTGTTTTGTACAGCATATGTTGCCAGCGTTTTATCAAAGTTGTAGTGAAATGATAAGCAAATGGAAGGAGATTAATCCAAAGGGAACATCAGTCGAGCTCGATGTATGGCCAGACATTCAATTAATGACAGGTGAAGTCATTTCTCGAACCTCATTTGGGAGTTGCTATGAAGAAGGGAGAAAAGTATTTGAACTTCAGAGAGAACAAGCTGAGTATGTAATGGACATGACTCATTCAGTTTATATACCAGGATCAAGGTATAACGATTTATTTTTACATAATATGGAAAATCACATGTTCATTACTTTGTCCTAATTTAAAAAACTTTTCTTGTTTGCTTCTACATTTGTTTTGTTAGGTTCTTGCCTACTA</genome_strand>
        <mrna_strand>AGCAGCTAGAAAGAAGACTCTTATTACTTTCATGGAGATTTCTTACAACATAACTATAGCAGCAATTTGTGTTGCAATTTTGTTGTTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTAAAGGGAAATCCATACAAATTACTCTATGGAGATTCGAAGGAACTCACAAATAAACTCAATGAAGCTAGATCTAAGCCCATCAATTTTTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGACTCCATCAACAAAAATG...................................................................................................................GTAAAAGTTCTTTTGTGTGGCTAGGCCCATATCCAATAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGGGTATCAAAAGCAAGCTCATCCCAATCCATTCGCCAAGTTATTTGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGACCAAACACAGAAAAATCATCAATCCTGCTTTTCATGTTGAGAAGTTAAAG...............................................................................................CATATGTTGCCAGCGTTTTATCAAAGCTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTCCAAAGGAAACATCAGTCGATCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTTCTCGAACCGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAGTATTTGAACTTCAGAAAG-ACAAGCTGAGTATGTAATTGACATAACTCGTTCAGTTTATATACCANGATCAAG.....................................................................................................GTTCTTGCCTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463452" ref_strand="+" ref_description="SGN-E463452 [cPRO-14-N17]">
      <seq>agcagctagaaagaagactcttattactttcatggagatttcttacaacataactatagcagcaatttgtgttgcaattttgttgttatatacatggagagtgttgaattgggcatggtttaagccaaagaaacttgagaaatacttaagaaaaagtggtctaaagggaaatccatacaaattactctatggagattcgaaggaactcacaaataaactcaatgaagctagatctaagcccatcaatttttctgatgatatagctcaaaggctcatcccttttttccttgactccatcaacaaaaatggtaaaagttcttttgtgtggctaggcccatatccaatagtgttgatcacagatcctgaacatgtaaaagagattttcacaaagaattatgggtatcaaaagcaagctcatcccaatccattcgccaagttatttgctataggtcttgcgttgcttgaggaagacaaatggaccaaacacagaaaaatcatcaatcctgcttttcatgttgagaagttaaagcatatgttgccagcgttttatcaaagctgtagtgaaatgataagcaaatgggaggatattgttccaaaggaaacatcagtcgatctcgatgtatggccagaccttcaattaatgacaggtgaagtcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="100182" stop="98714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99882" g_stop="99575" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99574" i_stop="99460" i_length="115">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99459" g_stop="99239" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="529" r_length="221" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99238" i_stop="99144" i_length="95">
            <donor d_prob="0.986" d_score="0.90"/>
            <acceptor a_prob="0.779" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99143" g_stop="99014" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="659" r_length="130" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-E463452" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99882" e_stop="99575"/>
          <exon e_start="99459" e_stop="99239"/>
          <exon e_start="99143" e_stop="99014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGGTAGAAAGAAGAGTCTTATTAACTTCATGGAGATTCCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAACTTGAAAAATACTTAAGAAAGAGTGGTCTCAAGGGAAATCCATACAAATTATTCTATGGCGATTTGAACGAAATCACAAATAAAGTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGATTCCATCAACAAAAATGGTATGTTTCGTTGTCCTTAAATCGATCTTACTTGATCAAATTTGAGCGTCTATTTATATTATGCCTTTTGTTTTGTTTTTTATATTTTTCCTAATCGAAAACGGATTACTCTCAGGTAAAAGGTCTTTTGTGTGGCTAGGCCCAAATCCAGCAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGCGTATCAAAAGATACCTCATCCCAATCCATTTGCAAACTCATTCGCTAAAGGTCTTGCGTTTCTTGAGGAAGACAAATGGACCAAACATCGAAAAATCATCAATCCTGCTTTCCATTTTGAGAAGTTTAAGGTTATTTTTATTTACTTCATAGTCTTATTACGCGAACATGAAGCTCTATTACTGATAACTAGTACTGGTTTTTGCGATTAATTTGTTTTGTACAGCATATGTTGCCAGCGTTTTATCAAAGTTGTAGTGAAATGATAAGCAAATGGAAGGAGATTAATCCAAAGGGAACATCAGTCGAGCTCGATGTATGGCCAGACATTCAATTAATGACAGGTGAAGTCATTT</genome_strand>
        <mrna_strand>AGCAGCTAGAAAGAAGACTCTTATTACTTTCATGGAGATTTCTTACAACATAACTATAGCAGCAATTTGTGTTGCAATTTTGTTGTTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTAAAGGGAAATCCATACAAATTACTCTATGGAGATTCGAAGGAACTCACAAATAAACTCAATGAAGCTAGATCTAAGCCCATCAATTTTTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGACTCCATCAACAAAAATG...................................................................................................................GTAAAAGTTCTTTTGTGTGGCTAGGCCCATATCCAATAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGGGTATCAAAAGCAAGCTCATCCCAATCCATTCGCCAAGTTATTTGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGACCAAACACAGAAAAATCATCAATCCTGCTTTTCATGTTGAGAAGTTAAAG...............................................................................................CATATGTTGCCAGCGTTTTATCAAAGCTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTCCAAAGGAAACATCAGTCGATCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249889" ref_strand="+" ref_description="SGN-E249889 [cLEF-57-B24]">
      <seq>aacaataaacagtttgaaaaataaaatttcatggagattttgtataacacaattatagcaataatttgtgttgcaatattgttggtatatacatggagagtgttgaattgggcatggtttaggccaaaaaaattggagaatttcttaaggcaaagaggtctaaaaggaaatccatataagttactctatggagatttgaatgaactcacaaaaagtatagttgaagctaagtctaagtcaatcaatatctctgatgatataactcaaaggcttatcccttttttccttgactccatcaacaaaaatggtaaaagttctttcatgtggctaggcccatatccaacagtgttgatcacaaatcctgaacatgtaaaagagattttgacaaagaattatgtgtacctaaagcaaactcatccaaatccatttgcaaagttattggctcaaggtcttgtgttggttgaggaagacaaatgggcaaaacacagaaaaataatcaatcctgctttccatgttgagaagttaaagcatatgttgccagcattttatatgagttgtagtgaaatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="106266" stop="108119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106566" g_stop="106872" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106873" i_stop="107155" i_length="283">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107156" g_stop="107376" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="528" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107377" i_stop="107778" i_length="402">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.578" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107779" g_stop="107819" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="569" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E249889" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106566" e_stop="106872"/>
          <exon e_start="107156" e_stop="107376"/>
          <exon e_start="107779" e_stop="107819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATAAACAGTTTGAAAAATAAAATTTCATGGAGATTTTGTATAACACAATTATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATGGTATGTTTATTTTATTGATTCGACTAGAAAGTAAACACTGCAACTTTGAGTATGCATGTCTAAACACCTTAACTTTATGTGATTCGTTTATCTAAACTTTATGTGTCACGTACGAGACACGGTGGAGACAAGTTGGAAGTGTTTAGTTGCTAGTTGGACCAAGTTTAGGAGTCTAGATTTGCACCTCAAAGTTGGAGTGTTTACTTGTCAGCTGATATCATATTTGAGTGTTTGTTTATGTAGTATATGCCTTTTTTTATAATTGAAAATGGATTTTTGGCAGGTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAGGTTAAATATACTTCTTTTTTGTTGTATTGAATTGGGATATGGCACAAGTATCCCCTAGATTATGATCGAAATCTCACAGATACACCTTAACTAATCTAAGGTCCTATTACTCCATAAACTCATTTTTTGTGTAATTTTGTACAACTTTTGGCTTACGTGACACACTCTGTGACTCCACTTAAGTGAGGCGCGTGGGAGATGTTTGGAGGTCACGTAGGCCAAAAAAGGTGTACAAAATTACAAAAAAAAAAGTTCAAGGGTAATAGAACCTCAGTTTAGTTAAGGTGCGTCTCTAAAATTTCGGTCATAGACTATGGTTACTAGTCTCTTATCCCTATTGAATTTAGGCCAAAAAAAGCAGAAAATTCAATTTTCTTTTTTTTTTTCATTTGTTTTGTACAGCATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGAT</genome_strand>
        <mrna_strand>AACAATAAACAGTTTGAAAAATAAAATTTCATGGAGATTTTGTATAACACAATTATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATG...........................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................CATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476523" ref_strand="+" ref_description="SGN-E476523 [cSTB-45-M17]">
      <seq>atagcaacaatttgtgttgcaattttgttggtatatacatggagagtgttgaattgggcatggtttaagccaaaaaaattggagaatttcttaaggcaaagaggtctaaaaggaaatccatataagttactctatggagatttgaatgaactcacaaaaagtatagtagaagcaaaatctaagcctatcaatttctctgatgatataactcaaaagctcatcccttatttccttgactccatcaacaaaaatggtaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="106320" stop="107175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106620" g_stop="106872" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106873" i_stop="107155" i_length="283">
            <donor d_prob="0.964" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107156" g_stop="107161" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="259" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E476523" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>259</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476523" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106620" e_stop="106872"/>
          <exon e_start="107156" e_stop="107161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATGGTATGTTTATTTTATTGATTCGACTAGAAAGTAAACACTGCAACTTTGAGTATGCATGTCTAAACACCTTAACTTTATGTGATTCGTTTATCTAAACTTTATGTGTCACGTACGAGACACGGTGGAGACAAGTTGGAAGTGTTTAGTTGCTAGTTGGACCAAGTTTAGGAGTCTAGATTTGCACCTCAAAGTTGGAGTGTTTACTTGTCAGCTGATATCATATTTGAGTGTTTGTTTATGTAGTATATGCCTTTTTTTATAATTGAAAATGGATTTTTGGCAGGTAAAA</genome_strand>
        <mrna_strand>ATAGCAACAATTTGTGTTGCAATTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTAGAAGCAAAATCTAAGCCTATCAATTTCTCTGATGATATAACTCAAAAGCTCATCCCTTATTTCCTTGACTCCATCAACAAAAATG...........................................................................................................................................................................................................................................................................................GTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E477713" ref_strand="+" ref_description="SGN-E477713 [cSTD-1-D11]">
      <seq>caacaatttgtgttgcaattttgttggtatatacatggagagtgttgaattgggcatggtttaggccaaaaaaattggagaatttcttaaggcaaagaggtctaaaaggaaatccatataagttactctatggagatttgaatgaactcacaaaaagtatagttgaagcaaaatctaagcctatcaatttctctgatgatataactcaaaggctcatcccttttttccttgactccatcaacaaaaatggtaaaagttctttcatgtggctaggcccatatccaacagtgttgatcacaaatcctgaacatgtaaaagagattttgacaaagaattatgtgtaccaaaagcaaactcatccaaatccatttgccaagttattggctcaaggtcttgtgttggttgaggaagacaaatgggcaaaacacagaaaaatcatcaatcctgctttccatgttgagaagttaaagcatatgttgccggcattttatatgagttgtagtgaaatgataagcaaatgggaggatattgtttcaaaggaaacatcatacgagctcgatgtatggccacaccttcaaatatgaccagtgaagttatttctcgaactgcattngggagtagctatgaagaaggagaatagtatttgaacttcagcaagaacagctgagcatatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="106324" stop="108285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106624" g_stop="106872" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106873" i_stop="107155" i_length="283">
            <donor d_prob="0.964" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107156" g_stop="107376" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="470" r_length="221" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107377" i_stop="107778" i_length="402">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.578" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107779" g_stop="107986" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="675" r_length="205" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E477713" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106624" e_stop="106872"/>
          <exon e_start="107156" e_stop="107376"/>
          <exon e_start="107779" e_stop="107986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATGGTATGTTTATTTTATTGATTCGACTAGAAAGTAAACACTGCAACTTTGAGTATGCATGTCTAAACACCTTAACTTTATGTGATTCGTTTATCTAAACTTTATGTGTCACGTACGAGACACGGTGGAGACAAGTTGGAAGTGTTTAGTTGCTAGTTGGACCAAGTTTAGGAGTCTAGATTTGCACCTCAAAGTTGGAGTGTTTACTTGTCAGCTGATATCATATTTGAGTGTTTGTTTATGTAGTATATGCCTTTTTTTATAATTGAAAATGGATTTTTGGCAGGTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAGGTTAAATATACTTCTTTTTTGTTGTATTGAATTGGGATATGGCACAAGTATCCCCTAGATTATGATCGAAATCTCACAGATACACCTTAACTAATCTAAGGTCCTATTACTCCATAAACTCATTTTTTGTGTAATTTTGTACAACTTTTGGCTTACGTGACACACTCTGTGACTCCACTTAAGTGAGGCGCGTGGGAGATGTTTGGAGGTCACGTAGGCCAAAAAAGGTGTACAAAATTACAAAAAAAAAAGTTCAAGGGTAATAGAACCTCAGTTTAGTTAAGGTGCGTCTCTAAAATTTCGGTCATAGACTATGGTTACTAGTCTCTTATCCCTATTGAATTTAGGCCAAAAAAAGCAGAAAATTCAATTTTCTTTTTTTTTTTCATTTGTTTTGTACAGCATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTTCAAAGGAAACATCATACGAGCTCGATGTATGGCCAGACCTTCAAATAATGACCAGTGAAGTTATTTCTCGAACCGCATTTGGTAGTAGCTATGAAGAAGGGAGAATAGTGTTTGAACTTCAGCAAGAACAAGCTGAGCATATAA</genome_strand>
        <mrna_strand>CAACAATTTGTGTTGCAATTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCAAAATCTAAGCCTATCAATTTCTCTGATGATATAACTCAAAGGCTCATCCCTTTTTTCCTTGACTCCATCAACAAAAATG...........................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCAAAAGCAAACTCATCCAAATCCATTTGCCAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATCATCAATCCTGCTTTCCATGTTGAGAAGTTAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................CATATGTTGCCGGCATTTTATATGAGTTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTTCAAAGGAAACATCATACGAGCTCGATGTATGGCCACACCTTCAAAT-ATGACCAGTGAAGTTATTTCTCGAACTGCATTNGGGAGTAGCTATGAAGAA-GGAGAATAGTATTTGAACTTCAGCAAGAAC-AGCTGAGCATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201118" ref_strand="+" ref_description="SGN-E201118 [cLEC-10-G22]">
      <seq>tttattaggcatattacttgaatccaatatgaaagaaattgaacaacacggaaacaaagatttcggattgacaacaacagaagtgattgaagaatgcaagttattctattttgctggacaggagaccacttcagtgttgctcgtgtggacgatggttttgctatgcctacatccagagtggcaagtacgggccagagaggaggttttacaggtcttcggaaatgaaaaaccagatttggaaggactaagtcacctcaaaattgtgacaatgatcttatacgagacattaaggctattccccccattaccggtatttagtagaaggaacaaagaagaagtcaaattaggggagctgcagctaccagctgaagtgatacttattatacctgcaatctttattcattatgacaaggaaatatggggcgaagatgcgaaggaattcaaaccagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="107922" stop="109236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108222" g_stop="108483" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108484" i_stop="108745" i_length="262">
            <donor d_prob="0.318" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108746" g_stop="108936" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="453" r_length="191" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E201118" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108222" e_stop="108483"/>
          <exon e_start="108746" e_stop="108936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAGATTTCGGATTGACAACAACAGAAGTGATTGAAGAATGCAAGTTATTCTATTTTGCTGGACAGGAGACCACTTCAGTGTTGCTCGTGTGGACGATGGTTTTGCTATGCCTACATCCAGAGTGGCAAGTACGGGCCAGAGAGGAGGTTTTACAGGTCTTCGGAAATGAAAAACCAGATTTGGAAGGACTAAGTCACCTCAAAATTGTAAGTACTTTCCGCTATGTCGTTGGCATAGATCAAACTTCAACAATCAAGGAAACTATAAAATCAGGATAAAACAAGTAGCTGTTAATGTGAAATCGTTCCGACTGGGCTCAGATAGCTAGGCCACTTCTATAATCCTATTTCAGTCTCGGAAGGGCAATTACTATGAGACTAAAATATCTCGCGAAGGCATGACCCCTGAATTTTGTAAGAAGTGAACTAATTCTACTTCCAACTTACGCAATGTATTTTTTTTCCATAGGTGACAATGATCTTATACGAGACATTAAGGCTATTCCCCCCATTACCGGTATTTAGTAGAAGGAACAAAGAAGAAGTCAAATTAGGGGAGCTGCAGCTACCAGCTGAAGTGATACTTATTATACCTGCAATCTTTATTCATTATGACAAGGAAATATGGGGCGAAGATGCGAAGGAATTCAAACCAGAAAG</genome_strand>
        <mrna_strand>TTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAGATTTCGGATTGACAACAACAGAAGTGATTGAAGAATGCAAGTTATTCTATTTTGCTGGACAGGAGACCACTTCAGTGTTGCTCGTGTGGACGATGGTTTTGCTATGCCTACATCCAGAGTGGCAAGTACGGGCCAGAGAGGAGGTTTTACAGGTCTTCGGAAATGAAAAACCAGATTTGGAAGGACTAAGTCACCTCAAAATT......................................................................................................................................................................................................................................................................GTGACAATGATCTTATACGAGACATTAAGGCTATTCCCCCCATTACCGGTATTTAGTAGAAGGAACAAAGAAGAAGTCAAATTAGGGGAGCTGCAGCTACCAGCTGAAGTGATACTTATTATACCTGCAATCTTTATTCATTATGACAAGGAAATATGGGGCGAAGATGCGAAGGAATTCAAACCAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E429143" ref_strand="+" ref_description="SGN-E429143 [STM-51-F23]">
      <seq>ctaacatatgccatatgtccccaatccaagaaagaaattgggggaaatggagaggaggtgtatccaacaatgttattataaagttacaaaattaggctaacttcccctcttcctttttttctatgtaaaataaagcagctagaaagaagactcttattactttcatggagatttcttacaacataactatagcagcaatttgtgttgcaattttgttgttatatacatggagagtgttgaattgggcatggtttaagccaaagaaacttgagaaatacttaagaaaaagtggtctaaagggaaatccatacaaattactctatggagattcgaaggaactcacaaataaactcaatgaagctagatctaagcccatcaatttttctgatgatataactcaaaggctcatcccttttttccttgactccatcaacaaagatggtaaaagttcttttgtgtggctaggcccatatccaatagtgttgatcacagatcctgaacatgtaaaagagattttcgcaaagaattatgggtatcaaaagcaagctcatcccaatccattcgccaagttatttgctataggtcttgcgttgcttgatgaagactaatggaccaaacacagaagcatcatcaatcctgcttatcatgttgagaagtagagcatatgttgccagcgttttatcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="109728" stop="111293"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110028" g_stop="110468" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110469" i_stop="110749" i_length="281">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.671" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110750" g_stop="110970" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="661" r_length="220" r_score="0.914"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110971" i_stop="111074" i_length="104">
            <donor d_prob="0.996" d_score="0.86"/>
            <acceptor a_prob="0.855" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111075" g_stop="111098" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="685" r_length="24" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E429143" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429143" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110028" e_stop="110468"/>
          <exon e_start="110750" e_stop="110970"/>
          <exon e_start="111075" e_stop="111098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACATATGCCATATGTCCCCAATCCAAGAAAGAAATTGGGGAAAATGGAGAGGAGGCGTATCGAACAATGTTATTATAAAGTTACAAAATCA-GCTTACTTCCCCTCTTCCTTTTTTTTCTATGTGAAAGAAAGCAGCTAGAAAGAAGAGTCTTATTACTTTCATGGAGATTTCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAAAAATATTTAAGAAAAAGTGGTCTTAAGGGAAATCCATACAAATTACTCTACGGAGATTCGAAGGAACTCACAAATAAACTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCGTCCCTTTTTTCATCGACTCCATCAACAAAAATGGTATGCTTCTTTTATTCTTCGTCATTAAAAGAATTAATTTTGTTCTGTTCTTGTATATATACAGTATAATTTTTCTATAGAGAACATCCTGATGAACCCCTTTTCGGTACCCCTAGCTCCATCCTAGAGGCAGATCCGATCTATAGACTATAGTTGACTGTTGCAATTTCCTAACCCTATCAATTCATAGTTGATAATTGGTCTTACTTGTGCTTAGCTGAGATAAAATTTGAGTGTATGTTTATTTATATTTTTCCTAATCGAGAACGGATTACTCTCAGGTAAAAGTTCTTTTGTGTGGCTAGGCCCATGTCCAATAGTGTTGATCACATATCCTGAACATGTAAAAGAGATTTTCACAAAGAACTGTGCGTATCAAAAGCAAGCTCATCCTAATCCATTTGCCAAGTTATTGGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGGCCAAACACCGAAAAATCATCAATCCTGCTTTCCATGTTGAGAAGTTAAAGGTTATATTCACTTCATATTCTAATTACTACTAAATTTAGCAAACATGAAGCTGTACTACTGATAATTCTAGTGCTGATTTTTTCGATTAATTTGTTTTGTACAGCATATGTTGCCAGCATTTTATCAG</genome_strand>
        <mrna_strand>CTAACATATGCCATATGTCCCCAATCCAAGAAAGAAATTGGGGGAAATGGAGAGGAGGTGTATCCAACAATGTTATTATAAAGTTACAAAATTAGGCTAACTTCCCCTCTTCC-TTTTTTTCTATGTAAAATAAAGCAGCTAGAAAGAAGACTCTTATTACTTTCATGGAGATTTCTTACAACATAACTATAGCAGCAATTTGTGTTGCAATTTTGTTGTTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTAAAGGGAAATCCATACAAATTACTCTATGGAGATTCGAAGGAACTCACAAATAAACTCAATGAAGCTAGATCTAAGCCCATCAATTTTTCTGATGATATAACTCAAAGGCTCATCCCTTTTTTCCTTGACTCCATCAACAAAGATG.........................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTTGTGTGGCTAGGCCCATATCCAATAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCGCAAAGAATTATGGGTATCAAAAGCAAGCTCATCCCAATCCATTCGCCAAGTTATTTGCTATAGGTCTTGCGTTGCTTGATGAAGACTAATGGACCAAACACAGAAGCATCATCAATCCTGCTTATCATGTTGAGAAG-TAGAG........................................................................................................CATATGTTGCCAGCGTTTTATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431149" ref_strand="+" ref_description="SGN-E431149 [STM-55-A17]">
      <seq>agcagctagaaagaagactcttattactttcatggagatttcttacaacataactatagcagcaatttgtgttgcaattttgttgttatatacatggagagtgttgaattgggcatggtttaagccaaagaaacttgagaaatacttaagaaaaagtggtctaaagggaaatccatacaaattactctatggagattcgaaggaactcacaaataaactcaatgaagctagatctaagcccatcaatttttctgatgatatagctcaaaggctcatcccttttttccttgactccatcaacaaaaatggtaaaagttcttttgtgtggctaggcccatatccaatagtgttgatcacagatcctgaacatgtaaaagagattttcacaaagaattatgggtatcaaaagcaagctcatcccaatccattcgccaagttatttgctataggtcttgcgttgcttgaggaagacaaatggaccaaacacagaaaaatcatcaatcctgcttttcatgttgagaagttaaagcatatgttgccagcgttttatcaaagctgtagtgaaatgataagcaaatgggaggatattgttccaaaggaaacatcagtcgatctcgatgtatggccagaccttcaattaatgacaggtgaagtcatttctcgaaccgcatttgggagtagctatgaagaagggagaatagtatttgaacttcagaaagacaagctgagtatgtaattgacataactcgttcagtttatataccangatcaaggttcttgcctacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="109861" stop="111621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110161" g_stop="110468" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110469" i_stop="110749" i_length="281">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.671" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110750" g_stop="110970" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="529" r_length="221" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110971" i_stop="111074" i_length="104">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.855" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111075" g_stop="111319" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="773" r_length="244" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111320" i_stop="111425" i_length="106">
            <donor d_prob="0.955" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111426" g_stop="111439" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="787" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E431149" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110161" e_stop="110468"/>
          <exon e_start="110750" e_stop="110970"/>
          <exon e_start="111075" e_stop="111319"/>
          <exon e_start="111426" e_stop="111439"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGCTAGAAAGAAGAGTCTTATTACTTTCATGGAGATTTCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAAAAATATTTAAGAAAAAGTGGTCTTAAGGGAAATCCATACAAATTACTCTACGGAGATTCGAAGGAACTCACAAATAAACTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCGTCCCTTTTTTCATCGACTCCATCAACAAAAATGGTATGCTTCTTTTATTCTTCGTCATTAAAAGAATTAATTTTGTTCTGTTCTTGTATATATACAGTATAATTTTTCTATAGAGAACATCCTGATGAACCCCTTTTCGGTACCCCTAGCTCCATCCTAGAGGCAGATCCGATCTATAGACTATAGTTGACTGTTGCAATTTCCTAACCCTATCAATTCATAGTTGATAATTGGTCTTACTTGTGCTTAGCTGAGATAAAATTTGAGTGTATGTTTATTTATATTTTTCCTAATCGAGAACGGATTACTCTCAGGTAAAAGTTCTTTTGTGTGGCTAGGCCCATGTCCAATAGTGTTGATCACATATCCTGAACATGTAAAAGAGATTTTCACAAAGAACTGTGCGTATCAAAAGCAAGCTCATCCTAATCCATTTGCCAAGTTATTGGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGGCCAAACACCGAAAAATCATCAATCCTGCTTTCCATGTTGAGAAGTTAAAGGTTATATTCACTTCATATTCTAATTACTACTAAATTTAGCAAACATGAAGCTGTACTACTGATAATTCTAGTGCTGATTTTTTCGATTAATTTGTTTTGTACAGCATATGTTGCCAGCATTTTATCAGAGTTGTACTGAAATGCTAAGCAAATGGGAGGAGATTATTCAAAAGGAAACATCAGTCGAGCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTTCCCGAACAGCATTTGGGAGTAGCTATGAGGAAGGGAGAATAGTATTTGAACTTCAGAAAGAACAAGCTGAGTATGTAATTGACATAACTCGTTCAGTTTATATACCAGGATCGAGGTAAAACAATTATTTGTGAAATTTCTACATACTATGGAAAATCACAAATTCACTACTTTGTACTTCAAAAGACTTTTCTTGTTTGCTTTTACATTTGTTTTGTTAGGTTCTTGCCTACTA</genome_strand>
        <mrna_strand>AGCAGCTAGAAAGAAGACTCTTATTACTTTCATGGAGATTTCTTACAACATAACTATAGCAGCAATTTGTGTTGCAATTTTGTTGTTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTAAAGGGAAATCCATACAAATTACTCTATGGAGATTCGAAGGAACTCACAAATAAACTCAATGAAGCTAGATCTAAGCCCATCAATTTTTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGACTCCATCAACAAAAATG.........................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTTGTGTGGCTAGGCCCATATCCAATAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGGGTATCAAAAGCAAGCTCATCCCAATCCATTCGCCAAGTTATTTGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGACCAAACACAGAAAAATCATCAATCCTGCTTTTCATGTTGAGAAGTTAAAG........................................................................................................CATATGTTGCCAGCGTTTTATCAAAGCTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTCCAAAGGAAACATCAGTCGATCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTTCTCGAACCGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAGTATTTGAACTTCAGAAAG-ACAAGCTGAGTATGTAATTGACATAACTCGTTCAGTTTATATACCANGATCAAG..........................................................................................................GTTCTTGCCTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463452" ref_strand="+" ref_description="SGN-E463452 [cPRO-14-N17]">
      <seq>agcagctagaaagaagactcttattactttcatggagatttcttacaacataactatagcagcaatttgtgttgcaattttgttgttatatacatggagagtgttgaattgggcatggtttaagccaaagaaacttgagaaatacttaagaaaaagtggtctaaagggaaatccatacaaattactctatggagattcgaaggaactcacaaataaactcaatgaagctagatctaagcccatcaatttttctgatgatatagctcaaaggctcatcccttttttccttgactccatcaacaaaaatggtaaaagttcttttgtgtggctaggcccatatccaatagtgttgatcacagatcctgaacatgtaaaagagattttcacaaagaattatgggtatcaaaagcaagctcatcccaatccattcgccaagttatttgctataggtcttgcgttgcttgaggaagacaaatggaccaaacacagaaaaatcatcaatcctgcttttcatgttgagaagttaaagcatatgttgccagcgttttatcaaagctgtagtgaaatgataagcaaatgggaggatattgttccaaaggaaacatcagtcgatctcgatgtatggccagaccttcaattaatgacaggtgaagtcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="109861" stop="111504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110161" g_stop="110468" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110469" i_stop="110749" i_length="281">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.671" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110750" g_stop="110970" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="529" r_length="221" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110971" i_stop="111074" i_length="104">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.855" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111075" g_stop="111204" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="659" r_length="130" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E463452" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E463452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110161" e_stop="110468"/>
          <exon e_start="110750" e_stop="110970"/>
          <exon e_start="111075" e_stop="111204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGCTAGAAAGAAGAGTCTTATTACTTTCATGGAGATTTCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAAAAATATTTAAGAAAAAGTGGTCTTAAGGGAAATCCATACAAATTACTCTACGGAGATTCGAAGGAACTCACAAATAAACTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCGTCCCTTTTTTCATCGACTCCATCAACAAAAATGGTATGCTTCTTTTATTCTTCGTCATTAAAAGAATTAATTTTGTTCTGTTCTTGTATATATACAGTATAATTTTTCTATAGAGAACATCCTGATGAACCCCTTTTCGGTACCCCTAGCTCCATCCTAGAGGCAGATCCGATCTATAGACTATAGTTGACTGTTGCAATTTCCTAACCCTATCAATTCATAGTTGATAATTGGTCTTACTTGTGCTTAGCTGAGATAAAATTTGAGTGTATGTTTATTTATATTTTTCCTAATCGAGAACGGATTACTCTCAGGTAAAAGTTCTTTTGTGTGGCTAGGCCCATGTCCAATAGTGTTGATCACATATCCTGAACATGTAAAAGAGATTTTCACAAAGAACTGTGCGTATCAAAAGCAAGCTCATCCTAATCCATTTGCCAAGTTATTGGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGGCCAAACACCGAAAAATCATCAATCCTGCTTTCCATGTTGAGAAGTTAAAGGTTATATTCACTTCATATTCTAATTACTACTAAATTTAGCAAACATGAAGCTGTACTACTGATAATTCTAGTGCTGATTTTTTCGATTAATTTGTTTTGTACAGCATATGTTGCCAGCATTTTATCAGAGTTGTACTGAAATGCTAAGCAAATGGGAGGAGATTATTCAAAAGGAAACATCAGTCGAGCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTT</genome_strand>
        <mrna_strand>AGCAGCTAGAAAGAAGACTCTTATTACTTTCATGGAGATTTCTTACAACATAACTATAGCAGCAATTTGTGTTGCAATTTTGTTGTTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTAAAGGGAAATCCATACAAATTACTCTATGGAGATTCGAAGGAACTCACAAATAAACTCAATGAAGCTAGATCTAAGCCCATCAATTTTTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGACTCCATCAACAAAAATG.........................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTTGTGTGGCTAGGCCCATATCCAATAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGGGTATCAAAAGCAAGCTCATCCCAATCCATTCGCCAAGTTATTTGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGACCAAACACAGAAAAATCATCAATCCTGCTTTTCATGTTGAGAAGTTAAAG........................................................................................................CATATGTTGCCAGCGTTTTATCAAAGCTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTCCAAAGGAAACATCAGTCGATCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476467" ref_strand="+" ref_description="SGN-E476467 [cSTB-44-N14]">
      <seq>gaagccttttattaatttcatggagatttcttacaacacaactgtaacaacaattagtgttgcaattttgctggtatatacatggaaagtgttgaattgggcatggtttaggccaaagaaacttgagaattacttaagaaaaagtggtcttcagggaaataaatacaaattactttatggagatttgaaggaactcacaaataaactcaatgaagccaaatccaagcccatcaatttctctggtgatgtacctcaaaggctcattccttttttctgtgactccatcaataaaaatggcccatatccagtagtgttgatcacagaacctgaacatgtaaaggagattttgacaaagaattatgtgtaccaaaagcaaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="114445" stop="115953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114745" g_stop="115040" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115041" i_stop="115568" i_length="528">
            <donor d_prob="1.000" d_score="0.70"/>
            <acceptor a_prob="0.963" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115569" g_stop="115653" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="381" r_length="85" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E476467" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114745" e_stop="115040"/>
          <exon e_start="115569" e_stop="115653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCATTTTATTAATTTAATGGAGATTTCTTACAACACAATTCTAACAGCAATTTGTGTTGCAATTTTGTTGGTATATACATGGAAAGTGTTGAACTGGGCATGGTTTAGGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTTAAGGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCAAAAATAAACTCAATGAAGCCAAATCTAAGCCCATCAATTTCTCCGATGGTATAGCTCAAAGAATCAACCCTTTTTTCGCCAACGCTATCGACAAAAACGGTATGTTTCATTTATTCTTTAAAGGAATAATTTTTTCCTATTCTAGTGTATATGTTGTGTAATTTTTTATAAAGACGAATCACTTTTTAGTACCCTAGCTCCATCCATGATTTGAGAGGGCCGTGAACTCTCTAGTAGAGGCAGATCCAAAATTTGAAATTTATGGATTTTAATTATAGGGACCTTAAGTGTATATAAATGGATATACGATCAAACATTTATGGTTCCTATAATACATATAATAGACAAGATTTGTACAAAAGCTATTCAGTTCACATGAACCAATACGTTTCGTGGTTTCTCCTCTCACGACTATAGTTGACTGATGAATTCATGGTTGATAACTTACACCAAATCAGGCAAAGTAAAAAAGATGTATAGTTAACATGTCAACATGTGAACTCTCGTATTTGGAGTGCTTACTTGTCAGTTGGAATTAAATTTGAGTGTCTGTTGATGTATTTGCCTCACTTTTTTTTCTAATCGAAAATGGATTACTCTCAGGTAAAAGTTCTTTTGTGTGGCTAGGCCCATATCCAATAGTGTTGATCACAGAACCTGAACATGTAAAGGAGATTTTGACAAAGAATTATGTGTACCAAAGGCAAACTCA</genome_strand>
        <mrna_strand>GAAGCCTTTTATTAATTTCATGGAGATTTCTTACAACACAACTGTAACAACAATTAGTGTTGCAATTTTGCTGGTATATACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAACTTGAGAATTACTTAAGAAAAAGTGGTCTTCAGGGAAATAAATACAAATTACTTTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAATCCAAGCCCATCAATTTCTCTGGTGATGTACCTCAAAGGCTCATTCCTTTTTTCTGTGACTCCATCAATAAAAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATATCCAGTAGTGTTGATCACAGAACCTGAACATGTAAAGGAGATTTTGACAAAGAATTATGTGTACCAAAAGCAAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431150" ref_strand="-" ref_description="SGN-E431150 [STM-55-A17]">
      <seq>gaagcaaagatttcggaatgacaccaattgagttgattgaagagtgcaagttatctattttgctggacaagaggctacttcagtgttgctcgtgtggacaatgattttgttgtgcctacatccagagtggcaagtacgtgccagagaggaggttttgcaggtcttcagaaatgaaaaaccaaacttggaaggactaagtcgcctcaaaattgtgacaatgatctttcatgagacgttaagactattccccccagtcccaacatatcgtagaaggaacaaacatgaagtcaaattaggggagctgagtctaccagctggagtgctactctttatacccacaatattaatacattatgacaaggaaatatggggtgaagacgcgaaggaattcaaaccagaaagattcagtgaaggagtgtcaaaggcaacaaaaggacaggtctcatttattccatttggctggggacctcgaatttgcattggacaaaactttgcaatgatggaagcaaagatggcaatagcaatgatactacaaaagttctccttcgaactctctccgtcttatacacatgctccagttgcaataattactactcaaccacagtatggtgctcctttgcttatgcgcaaactttgaaatggatgttgctgatatttaagatcaatggtgttgtgttctccatgttttagctcaaatactactaaactagtctgcatatggctgaaatcgctcttttcctatttcaacgttgtgcttttgagtattatcgttgtgttcacccctttttgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="111299" stop="117832"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116493" g_stop="116704" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.887"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116705" i_stop="116992" i_length="288">
            <donor d_prob="0.806" d_score="0.92"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116993" g_stop="117541" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="761" r_length="550" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E431150" ref_strand="-">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431150" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="116493" e_stop="116704"/>
          <exon e_start="116993" e_stop="117541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCAATGATTTCGGAATAACAACAGCTGAAATGATAGAAGAATGTAAGTTATTCTATTTTGCTGGGCAAGAGACCACTTCAGTGTTGCTCGCGTGGACAATGATTTTGTTGAGCCTACATCCAGAGTGGCAAGCACGTGCCAGAGAGGAGGTGCTGCAAGTCTTCGGAAATGAAAAACCAAATTCGGAAGGGCTAAGTCGCCTCAAAATTGTAAGTACTTTCCGCCAGTTGATTATGTAAGGCAACTTAAAATAGCCCAAGATCACTGCATAGATCGAATTTTAAAGATGAAAAACAGTGTTAAATCAACGATAATATAAGTAGTTTTTATATCGTTTTGCCCATCATTAATGCCAAATTGTTCCCACTGAGATCAGATAAACCACATTTTCTACTCGGAGACTAAAAGATCTCGAAAAGGTATGACATCGACATTTTGTAAGAAGTGAACTCATTCTACTTCCAACTTATGCAATACATTCTTCTCTCCATATATAGGTGACAATGATCTTGCATGAGACGTTAAGGCTATTCCCCTCAGTACCAACGTATCGTAGAAGGAACAAACATGAAGTCAAATTAGGGGAGCTGAGTTTACCAGCTGGAGTGCAACTCATTATACCCACAATATTAATTCATTATGACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGAAAGATTCAGTGAGGGAGTGTCAAAGGCAACAAAAGGACAGGTCTCGTTTATTCCATTTGGTGGGGGACCTAGAGTTTGCATCGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCAATAGCAATGATATTACAAAAGTTCTCCTTCGAACTCTCTCCGTCTTATACACATGCTCCAGTTCTAACAATTACTATTCATCCACAGTATGGTGCTCCTCTGCTTATGCGCAAACTTTGAAATGGATGTTGCTCATATTTAATACCAATGGTGTTGTGTTCTCCGTGTTTCAGCTCGAATACTGCTAAACTAGTC-GGTTATGGCTGACATAACTCTTTTCCTATTTCAACATTGCAGTTTTGA</genome_strand>
        <mrna_strand>GAAGCAAAGATTTCGGAATGACACCAATTGAGTTGATTGAAGAGTGCAAGTTA-TCTATTTTGCTGGACAAGAGGCTACTTCAGTGTTGCTCGTGTGGACAATGATTTTGTTGTGCCTACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTTTTGCAGGTCTTCAGAAATGAAAAACCAAACTTGGAAGGACTAAGTCGCCTCAAAATT................................................................................................................................................................................................................................................................................................GTGACAATGATCTTTCATGAGACGTTAAGACTATTCCCCCCAGTCCCAACATATCGTAGAAGGAACAAACATGAAGTCAAATTAGGGGAGCTGAGTCTACCAGCTGGAGTGCTACTCTTTATACCCACAATATTAATACATTATGACAAGGAAATATGGGGTGAAGACGCGAAGGAATTCAAACCAGAAAGATTCAGTGAAGGAGTGTCAAAGGCAACAAAAGGACAGGTCTCATTTATTCCATTTGGCTGGGGACCTCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAGATGGCAATAGCAATGATACTACAAAAGTTCTCCTTCGAACTCTCTCCGTCTTATACACATGCTCCAGTTGCAATAATTACTACTCAACCACAGTATGGTGCTCCTTTGCTTATGCGCAAACTTTGAAATGGATGTTGCTGATATTTAAGATCAATGGTGTTGTGTTCTCCATGTTTTAGCTCAAATACTACTAAACTAGTCTGCATATGGCTGAAATCGCTCTTTTCCTATTTCAACGTTGTGCTTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E429144" ref_strand="-" ref_description="SGN-E429144 [STM-51-F23]">
      <seq>atccagagtggcaagtatgtgccagagaggaggttttgcaggtcttcagaaatgaaaaaccaagcttggaaggattaagtcgcctcaaaattgtgacaatgatctgtcatgagacgttaagactattccccccagtcccaacatatcgtggagggaacaaacatgaagtcaaattaggggagctgagtctaccagctggagtggtactctttatacccacaatattaatacattatgacaaggaaatatggggtgaagccgcgaaggaattcaaaccagaaagattcagtgaaggagtgtcaaaggcaacaaaaggacaggtctcatttattccatttggctggggacctcgaatttgcattggacaaaactttgcaatgatggaagcaaagatggcaatagcaatgatactacaaaagttctccttggaactctctccgtgttatacacatgctccagttgcaataattactactcaaccacagtatggtgctcctttgcttatgcgcaaactttgaaatggatgttgctgatatttaagatcaatggtgtagagttctccatgttttagctcaaatactactgaggtagtgggcataaaaaacacaaaaaagttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="108092" stop="117795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116613" g_stop="116704" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.880"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116705" i_stop="116992" i_length="288">
            <donor d_prob="0.806" d_score="0.88"/>
            <acceptor a_prob="0.993" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116993" g_stop="117494" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="594" r_length="502" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-E429144" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429144" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="116613" e_stop="116704"/>
          <exon e_start="116993" e_stop="117494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAGAGTGGCAAGCACGTGCCAGAGAGGAGGTGCTGCAAGTCTTCGGAAATGAAAAACCAAATTCGGAAGGGCTAAGTCGCCTCAAAATTGTAAGTACTTTCCGCCAGTTGATTATGTAAGGCAACTTAAAATAGCCCAAGATCACTGCATAGATCGAATTTTAAAGATGAAAAACAGTGTTAAATCAACGATAATATAAGTAGTTTTTATATCGTTTTGCCCATCATTAATGCCAAATTGTTCCCACTGAGATCAGATAAACCACATTTTCTACTCGGAGACTAAAAGATCTCGAAAAGGTATGACATCGACATTTTGTAAGAAGTGAACTCATTCTACTTCCAACTTATGCAATACATTCTTCTCTCCATATATAGGTGACAATGATCTTGCATGAGACGTTAAGGCTATTCCCCTCAGTACCAACGTATCGTAGAAGGAACAAACATGAAGTCAAATTAGGGGAGCTGAGTTTACCAGCTGGAGTGCAACTCATTATACCCACAATATTAATTCATTATGACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGAAAGATTCAGTGAGGGAGTGTCAAAGGCAACAAAAGGACAGGTCTCGTTTATTCCATTTGGTGGGGGACCTAGAGTTTGCATCGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCAATAGCAATGATATTACAAAAGTTCTCCTTCGAACTCTCTCCGTCTTATACACATGCTCCAGTTCTAACAATTACTATTCATCCACAGTATGGTGCTCCTCTGCTTATGCGCAAACTTTGAAATGGATGTTGCTCATATTTAATACCAATGGTGTTGTGTTCTCCGTGTTTCAGCTCGAATACTGCTAAACTAGTCG</genome_strand>
        <mrna_strand>ATCCAGAGTGGCAAGTATGTGCCAGAGAGGAGGTTTTGCAGGTCTTCAGAAATGAAAAACCAAGCTTGGAAGGATTAAGTCGCCTCAAAATT................................................................................................................................................................................................................................................................................................GTGACAATGATCTGTCATGAGACGTTAAGACTATTCCCCCCAGTCCCAACATATCGTGGAGGGAACAAACATGAAGTCAAATTAGGGGAGCTGAGTCTACCAGCTGGAGTGGTACTCTTTATACCCACAATATTAATACATTATGACAAGGAAATATGGGGTGAAGCCGCGAAGGAATTCAAACCAGAAAGATTCAGTGAAGGAGTGTCAAAGGCAACAAAAGGACAGGTCTCATTTATTCCATTTGGCTGGGGACCTCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAGATGGCAATAGCAATGATACTACAAAAGTTCTCCTTGGAACTCTCTCCGTGTTATACACATGCTCCAGTTGCAATAATTACTACTCAACCACAGTATGGTGCTCCTTTGCTTATGCGCAAACTTTGAAATGGATGTTGCTGATATTTAAGATCAATGGTGTAGAGTTCTCCATGTTTTAGCTCAAATACTACTGAGGTAGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>70</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="16329" PGL_stop="15944"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16329" e_stop="15944"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="16329" e_stop="15944" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16329" stop="15944"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGCCAGGGCCACTGTTATCTGCTCCCCGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGTGCTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTTAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCCTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAAATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</gDNA_template>
            <first_frame> R  K  W  R  L  V  D  D  F  F  F  I  I  L  L  S  H  F  T  A  R  A  T  V  I  C  S  P  I  T  G  E  V  F  S  A  L  W  V  A  M  G  R  Q  F  L  V  E  R  R  A  S  V  Q  Q  H  S  S  L  D  I  Y  L  R  L  S  R  L  S  F  V  Y  L  Q  T  K  Q  V  *  P  F  P  *  A  F  G  F  H  L  N  L  L  L  S  P  Y  L  *  R  Q  I  F  I  Q  C  C  D  R  S  F  V  N  R  R  G  R  V  Y  F  E  S  F  F  L  N  L  L  N   </first_frame>
            <second_frame>  E  N  G  G  L  *  T  I  S  S  S  S  S  S  S  V  T  S  R  P  G  P  L  L  S  A  P  R  S  R  A  R  Y  F  P  P  F  G  S  L  W  V  A  N  S  S  S  S  A  V  L  L  S  N  N  T  A  V  S  I  S  I  F  A  S  L  A  F  P  S  C  I  S  K  R  S  K  F  N  L  F  L  R  L  S  V  S  I  S  T  S  F  F  L  L  I  C  D  A  R  S  S  S  N  V  V  T  A  A  L  *  I  A  V  V  A  S  T  L  S  P  S  S  L  T  F  *  I  </second_frame>
            <third_frame>   K  M  E  A  C  R  R  F  L  L  H  H  P  P  Q  S  L  H  G  Q  G  H  C  Y  L  L  P  D  H  G  R  G  I  F  R  P  L  G  R  Y  G  S  P  I  P  R  R  A  P  C  F  C  P  T  T  Q  Q  S  R  Y  L  S  S  P  L  S  P  F  L  R  V  S  P  N  E  A  S  L  T  F  S  L  G  F  R  F  P  S  Q  P  P  S  F  S  L  S  V  T  P  D  L  H  P  M  L  *  P  Q  L  C  K  S  P  W  S  R  L  L  *  V  L  L  P  *  P  S  E  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16327" stop="16010"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMEACRRFLLHHPPQSLHGQGHCYLLPDHGRGIFRPLGRYGSPIPRRAPCFCPTTQQSRYLSSPLSPFLRVSPNEASLTFSLGFRFPSQPPSFSLSVTPDLHPML*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16310" stop="15996"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TISSSSSSSVTSRPGPLLSAPRSRARYFPPFGSLWVANSSSSAVLLSNNTAVSISIFASLAFPSCISKRSKFNLFLRLSVSISTSFFLLICDARSSSNVVTAAL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16329" stop="16093"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKWRLVDDFFFIILLSHFTARATVICSPITGEVFSALWVAMGRQFLVERRASVQQHSSLDIYLRLSRLSFVYLQTKQV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="17167" PGL_stop="16632"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17167" e_stop="16632"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="17167" e_stop="16632" e_length="536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17167" stop="16632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACCACAGTGGGCTGAGCCACCACAACGTCCGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAACTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGCAAAAAGGTACCTGAGAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAGCACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</gDNA_template>
            <first_frame> R  L  V  L  S  W  I  Y  V  *  *  R  E  V  D  R  R  S  C  I  S  S  I  S  T  K  S  R  W  R  R  I  L  S  P  L  H  F  N  F  H  F  S  N  L  L  H  Q  L  H  D  Q  F  V  L  F  H  H  S  G  L  S  H  H  N  V  R  K  T  P  F  V  I  V  V  S  H  N  C  F  S  F  V  *  T  *  S  R  E  G  I  C  R  T  F  R  S  G  E  V  R  M  I  C  Q  L  Y  *  H  R  S  A  K  R  Y  L  R  G  K  N  N  S  K  A  N  L  L  V  H  I  Q  S  T  K  C  I  I  S  H  I  K  Q  I  S  T  Q  V  V  L  F  E  D  I  L  T  H  E  *  G  R  I  Y  I  L  N  K  Q  E  F  V  C  L  A  L  S  W  E  I   </first_frame>
            <second_frame>  G  W  F  *  V  G  S  M  F  D  E  G  K  *  T  G  G  L  A  S  A  V  L  V  P  N  P  G  G  G  A  S  C  L  R  C  I  S  T  F  I  S  A  I  C  C  I  S  C  M  I  N  S  F  C  S  T  T  V  G  *  A  T  T  T  S  V  R  R  P  S  S  L  L  S  P  I  T  V  F  P  L  S  E  L  D  R  G  K  E  S  V  G  P  F  D  L  V  K  *  G  *  S  A  S  F  I  D  T  D  Q  Q  K  G  T  *  E  V  K  T  T  Q  R  Q  I  C  *  C  I  S  R  V  Q  N  A  *  Y  R  T  *  N  R  *  A  H  K  S  F  C  L  R  I  S  *  P  T  N  K  D  G  Y  I  F  *  T  N  R  N  L  F  V  W  R  Y  L  G  K  S  </second_frame>
            <third_frame>   A  G  S  E  L  D  L  C  L  M  K  G  S  R  P  E  V  L  H  Q  Q  Y  *  Y  Q  I  Q  V  E  A  H  P  V  S  V  A  F  Q  L  S  F  Q  Q  S  V  A  S  A  A  *  S  I  R  S  V  P  P  Q  W  A  E  P  P  Q  R  P  *  D  A  L  R  H  C  C  L  P  *  L  F  F  L  C  L  N  L  I  E  G  R  N  L  *  D  L  S  I  W  *  S  K  D  D  L  P  A  L  L  T  Q  I  S  K  K  V  P  E  R  *  K  Q  L  K  G  K  F  V  S  A  Y  P  E  Y  K  M  H  N  I  A  H  K  T  D  K  H  T  S  R  F  V  *  G  Y  L  N  P  R  I  R  T  D  I  Y  F  E  Q  T  G  I  C  L  F  G  A  I  L  G  N  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17134" stop="16916"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REVDRRSCISSISTKSRWRRILSPLHFNFHFSNLLHQLHDQFVLFHHSGLSHHNVRKTPFVIVVSHNCFSFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="23313" PGL_stop="24048"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23313" e_stop="24048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="23313" e_stop="24048" e_length="736"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23313" stop="24048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23313" stop="24008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23313" stop="24007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTATGATTATCCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAGAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTCCAAAGGGAAGTTCGCACCAAACTG</gDNA_template>
            <first_frame> *  L  G  E  W  M  S  S  A  L  *  N  R  S  L  P  M  D  T  D  L  F  W  L  P  S  I  I  S  P  N  G  W  K  Q  P  L  T  N  R  *  P  R  K  W  W  P  T  L  S  A  T  I  *  S  A  D  L  E  F  Q  N  P  S  S  L  I  T  V  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  *  L  S  T  E  G  Q  L  L  I  A  L  K  *  T  E  L  *  R  P  P  T  R  T  S  R  R  F  *  G  K  *  L  T  S  S  G  V  G  M  K  C  C  H  M  L  Y  W  V  I  E  R  R  S  E  H  Q  L  G  L  L  H  T  C  *  Y  T  E  Q  K  Q  S  Y  L  S  K  S  R  Y  R  H  *  G  S  S  K  K  P  S  *  V  M  L  S  G  L  A  N  G  L  I  N  *  P  *  L  M  K  R  G  W  L  L  F  V  M  A  S  C  I  D  K  E  *  L  A  L  F  T  E  E  *  E  P  E  I  L  K  L  V  S  W  F  L  S  V  F  F  L  I  K  T  S  P  K  G  S  S  H  Q  T  </first_frame>
            <second_frame>  S  L  G  N  G  C  H  R  P  Y  R  T  G  R  F  Q  W  T  Q  I  Y  F  G  C  H  R  L  F  H  Q  M  G  G  S  S  L  L  Q  I  G  N  Q  E  S  G  G  R  L  C  P  Q  Q  F  D  L  P  I  W  S  S  R  I  H  H  H  *  *  R  C  K  S  Q  Q  S  S  D  E  R  D  M  *  T  I  Y  D  Y  P  P  K  V  N  C  L  S  P  S  N  E  R  S  C  R  G  R  Q  Q  E  H  Q  E  D  S  E  E  N  D  *  Q  A  A  G  L  A  *  N  V  A  I  C  S  T  G  L  S  N  D  G  Q  N  I  N  W  G  Y  S  I  L  A  S  I  R  N  R  S  S  R  T  C  R  S  R  D  T  V  T  E  D  H  P  R  S  R  A  K  *  C  *  V  G  *  Q  T  D  *  S  T  S  L  D  *  *  K  E  D  G  C  C  L  S  W  P  V  V  *  T  K  N  D  S  R  F  S  Q  K  S  K  S  Q  K  F  *  S  W  S  V  G  S  *  A  Y  F  S  S  S  R  R  V  Q  R  E  V  R  T  K  L </second_frame>
            <third_frame>   A  W  G  M  D  V  I  G  P  I  E  P  V  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  V  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  G  V  P  E  S  I  I  T  D  N  G  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  M  I  I  H  R  R  S  T  A  Y  R  P  Q  M  N  G  A  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  M  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  A  T  P  Y  L  L  V  Y  G  T  E  A  V  V  P  V  E  V  E  I  P  S  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  S  K  R  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  Q  L  Y  R  Q  R  M  T  R  A  F  H  R  R  V  R  A  R  N  F  E  V  G  Q  L  V  L  K  R  I  F  P  H  Q  D  E  S  K  G  K  F  A  P  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23315" stop="24046"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AWGMDVIGPIEPVASNGHRFILVAIDYFTKWVEAASYKSVTKKVVADFVRNNLICRFGVPESIITDNGANLNSHLMKEICEQFMIIHRRSTAYRPQMNGAVEAANKNIKKILRKMIDKQRGWHEMLPYALLGYRTTVRTSTGATPYLLVYGTEAVVPVEVEIPSLRIIQEAELSNAEWVSKRIDQLALIDEKRMVAVCHGQLYRQRMTRAFHRRVRARNFEVGQLVLKRIFPHQDESKGKFAPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="47773" PGL_stop="42624"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47773" e_stop="47503"/>
            <exon e_start="47264" e_stop="47047"/>
            <exon e_start="44061" e_stop="43816"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.849" e_score="0.948"/>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="47773" e_stop="47503" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.849">
            <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47264" e_stop="47047" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44061" e_stop="43816" e_length="246"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47773" stop="47503"/>
              <exon start="47264" stop="47093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47735" stop="47503"/>
              <exon start="47264" stop="47047"/>
              <exon start="44061" stop="43912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47720" stop="47503"/>
              <exon start="47264" stop="47047"/>
              <exon start="44061" stop="43816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47720" stop="47503"/>
              <exon start="47264" stop="47047"/>
              <exon start="44061" stop="43956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47585" stop="47503"/>
              <exon start="47264" stop="47047"/>
              <exon start="44061" stop="43826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206103" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTGCTTACTACTTAGTTTCTTTTTTATTAACAATAACTTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG : GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG : AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCG</gDNA_template>
            <first_frame> V  A  Y  Y  L  V  S  F  L  L  T  I  T  S  V  I  Y  A  W  K  L  L  D  W  A  W  F  R  P  R  K  L  E  K  C  L  R  K  Q  G  L  K  G  N  S  Y  K  L  I  F  G  D  L  K  E  L  A  K  S  F  E  D  V  K  S  K  P  L  N  V  F  D  D  D  I  T  P  R  I  V  P  Y  F  V  D  T  I  K  K  H   : G  K  N  C  F  I  W  I  G  P  K  P  M  V  L  V  N  D  A  E  V  I  R  D  V  F  N  K  Y  V  L  Y  Q  K  P  K  P  T  P  L  T  K  L  L  A  Q  G  L  A  S  Y  E  E  D  K  W  A  M  H  R  K  I  L  N  P  A  F  H  M  E  K  I  K  :  N  M  V  P  A  I  H  L  S  C  T  E  M  V  S  Q  W  E  E  S  I  S  T  K  G  T  S  C  E  I  D  I  W  P  Y  L  Q  K  L  S  S  D  V  I  S  R  T  A  F  G  S  N  Y  E  E  G  R  M  I  F  E  L  Q  K  E  Q  A  Q  H  F  I  E  A  T  R  T  L  Y  I  L  G  S </first_frame>
            <second_frame>  L  L  T  T  *  F  L  F  Y  *  Q  *  L  Q  *  Y  M  H  G  S  C  *  I  G  H  G  L  G  Q  E  N  *  K  N  A  *  E  N  K  V  S  K  G  T  L  T  N  *  F  L  E  I  S  K  S  *  P  K  A  L  K  M  L  S  P  S  H  *  M  S  L  M  M  T  *  L  L  E  L  F  L  I  L  L  I  Q  S  R  N  M  :  V  K  I  V  L  Y  G  L  G  Q  S  L  W  Y  *  *  M  M  L  R  *  *  E  M  C  L  T  N  M  F  S  T  K  S  L  N  Q  L  P  S  P  S  C  *  H  K  D  L  Q  A  M  K  R  I  N  G  Q  C  I  E  K  S  S  I  L  L  S  I  W  R  R  L  R :   I  W  F  Q  Q  F  I  *  A  A  L  K  W  *  A  N  G  R  S  Q  S  Q  R  K  E  H  L  V  K  S  I  Y  G  L  T  F  K  N  C  L  V  M  *  F  L  E  Q  P  L  E  A  T  M  K  K  V  E  *  Y  L  S  F  K  K  N  K  L  S  I  S  L  K  L  L  V  P  C  I  F  *  D   </second_frame>
            <third_frame>   C  L  L  L  S  F  F  F  I  N  N  N  F  S  N  I  C  M  E  V  V  R  L  G  M  V  *  A  K  K  T  R  K  M  P  K  K  T  R  S  Q  R  E  L  L  Q  I  N  F  W  R  S  Q  R  V  S  Q  K  L  *  R  C  *  V  Q  A  I  E  C  L  *  *  *  H  N  S  *  N  C  S  L  F  C  *  Y  N  Q  E  T  W :   *  K  L  F  Y  M  D  W  A  K  A  Y  G  I  S  K  *  C  *  G  N  K  R  C  V  *  Q  I  C  S  L  P  K  A  *  T  N  S  P  H  Q  V  A  S  T  R  T  C  K  L  *  R  G  *  M  G  N  A  *  K  N  P  Q  S  C  F  P  Y  G  E  D  *   : E  Y  G  S  S  N  S  F  E  L  H  *  N  G  E  P  M  G  G  V  N  L  N  E  R  N  I  L  *  N  R  Y  M  A  L  P  S  K  I  V  *  *  C  D  F  S  N  S  L  W  K  Q  L  *  R  R  S  N  D  I  *  A  S  K  R  T  S  S  A  F  H  *  S  Y  S  Y  L  V  Y  S  R  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47773" stop="47503"/>
                    <exon start="47264" stop="47047"/>
                    <exon start="44061" stop="43816"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAYYLVSFLLTITSVIYAWKLLDWAWFRPRKLEKCLRKQGLKGNSYKLIFGDLKELAKSFEDVKSKPLNVFDDDITPRIVPYFVDTIKKHGKNCFIWIGPKPMVLVNDAEVIRDVFNKYVLYQKPKPTPLTKLLAQGLASYEEDKWAMHRKILNPAFHMEKIKNMVPAIHLSCTEMVSQWEESISTKGTSCEIDIWPYLQKLSSDVISRTAFGSNYEEGRMIFELQKEQAQHFIEATRTLYILGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44062" e_stop="43814"/>
            <exon e_start="43609" e_stop="43225"/>
            <exon e_start="43143" e_stop="42624"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="0.997"/>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44062" e_stop="43814" e_length="249"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43813" i_stop="43610" i_length="204"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="43609" e_stop="43225" e_length="385"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="43224" i_stop="43144" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.940">
            <gDNA_exon_boundary e_start="43143" e_stop="42624" e_length="520"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44062" stop="43814"/>
              <exon start="43609" stop="43243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43302" stop="43225"/>
              <exon start="43143" stop="42641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401995" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43300" stop="43225"/>
              <exon start="43143" stop="42641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432693" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43062" stop="42624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616846" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCGAG : GTTTTTGCCAACTAAGAAAAATCGAAGGATGAAGGAGATCGATAAAAACGTTCAAGCAATGATTAGAGGAATAATTGATAAAAGAGTGAAGGCATTGAAAGCAGGGGAGGCCAATACTGATGACTTATTAGGGATGTTGTTGGAATCCAACTTTAAACAAATTGAACAACATGGCAACAAGGATTTTGGTATGAGTACGCGAGAGATCATCGAGGAGTGTAAATTGTTCTATTTTGCTGGACAAGAAACCACCTCTGTATTGCTTGTATGGACTATGATTTTGTTGAGTAGACATCTAGATTGGCAAACTCGCGCTAGAGAAGAGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGATTAAACCGCCTAAAAATT : GTGACAATGATTTTGAACGAGTCGTTAAGGCTATATCCACCAGCTGATTCACTTAATCGAAAGACTACAACCAATACCAAGCTAGGGGAACTAAGTTTACCAGCTGGAGTGATGCTCGTATTGCCAATAATTTTATTGCATCACGACAAGGAAATATGGGGCGAAGATGCAACAGAGTTCAAGCCAGAGAGATTTAGTGAAGGCGTTTCAAAGGCAACAAAGGGTCAAATGACGTTTTTCCCATTTGGCGGGGGACCTAGGATATGCATTGGGCTAAACTTCACGATGATAGAAGCGAAGATGGCTTTGGCTATGATTCTACAACACTTCTCCTTTGAACTATCTCCTTCTTATACACACGCTCCGCAGTCTGTAATAACTATTCAACCCCAATATGGTGCTCCTCTTATATTGCATAAATTGTAAGCTAGCATTATTAAGTTGAAGCATTTTGCATCTTTGGTCTTTACTTTTGTTCGATAGCAAGTCTACATCATCAATAAGTACATATGTAATTTGT</gDNA_template>
            <first_frame> E  Y  G  S  S  N  S  F  E  L  H  *  N  G  E  P  M  G  G  V  N  L  N  E  R  N  I  L  *  N  R  Y  M  A  L  P  S  K  I  V  *  *  C  D  F  S  N  S  L  W  K  Q  L  *  R  R  S  N  D  I  *  A  S  K  R  T  S  S  A  F  H  *  S  Y  S  Y  L  V  Y  S  R  I  E  :  V  F  A  N  *  E  K  S  K  D  E  G  D  R  *  K  R  S  S  N  D  *  R  N  N  *  *  K  S  E  G  I  E  S  R  G  G  Q  Y  *  *  L  I  R  D  V  V  G  I  Q  L  *  T  N  *  T  T  W  Q  Q  G  F  W  Y  E  Y  A  R  D  H  R  G  V  *  I  V  L  F  C  W  T  R  N  H  L  C  I  A  C  M  D  Y  D  F  V  E  *  T  S  R  L  A  N  S  R  *  R  R  G  F  A  S  L  R  *  *  Q  T  R  I  *  W  I  K  P  P  K  N   : C  D  N  D  F  E  R  V  V  K  A  I  S  T  S  *  F  T  *  S  K  D  Y  N  Q  Y  Q  A  R  G  T  K  F  T  S  W  S  D  A  R  I  A  N  N  F  I  A  S  R  Q  G  N  M  G  R  R  C  N  R  V  Q  A  R  E  I  *  *  R  R  F  K  G  N  K  G  S  N  D  V  F  P  I  W  R  G  T  *  D  M  H  W  A  K  L  H  D  D  R  S  E  D  G  F  G  Y  D  S  T  T  L  L  L  *  T  I  S  F  L  Y  T  R  S  A  V  C  N  N  Y  S  T  P  I  W  C  S  S  Y  I  A  *  I  V  S  *  H  Y  *  V  E  A  F  C  I  F  G  L  Y  F  C  S  I  A  S  L  H  H  Q  *  V  H  M  *  F   </first_frame>
            <second_frame>  N  M  V  P  A  I  H  L  S  C  T  E  M  V  S  Q  W  E  E  S  I  S  T  K  G  T  S  C  E  I  D  I  W  P  Y  L  Q  K  L  S  S  D  V  I  S  R  T  A  F  G  S  N  Y  E  E  G  R  M  I  F  E  L  Q  K  E  Q  A  Q  H  F  I  E  A  T  R  T  L  Y  I  L  G  S  R :   F  L  P  T  K  K  N  R  R  M  K  E  I  D  K  N  V  Q  A  M  I  R  G  I  I  D  K  R  V  K  A  L  K  A  G  E  A  N  T  D  D  L  L  G  M  L  L  E  S  N  F  K  Q  I  E  Q  H  G  N  K  D  F  G  M  S  T  R  E  I  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  S  R  H  L  D  W  Q  T  R  A  R  E  E  V  L  Q  V  F  G  D  S  K  L  E  F  D  G  L  N  R  L  K  I  :  V  T  M  I  L  N  E  S  L  R  L  Y  P  P  A  D  S  L  N  R  K  T  T  T  N  T  K  L  G  E  L  S  L  P  A  G  V  M  L  V  L  P  I  I  L  L  H  H  D  K  E  I  W  G  E  D  A  T  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  M  T  F  F  P  F  G  G  G  P  R  I  C  I  G  L  N  F  T  M  I  E  A  K  M  A  L  A  M  I  L  Q  H  F  S  F  E  L  S  P  S  Y  T  H  A  P  Q  S  V  I  T  I  Q  P  Q  Y  G  A  P  L  I  L  H  K  L  *  A  S  I  I  K  L  K  H  F  A  S  L  V  F  T  F  V  R  *  Q  V  Y  I  I  N  K  Y  I  C  N  L  </second_frame>
            <third_frame>   I  W  F  Q  Q  F  I  *  A  A  L  K  W  *  A  N  G  R  S  Q  S  Q  R  K  E  H  L  V  K  S  I  Y  G  L  T  F  K  N  C  L  V  M  *  F  L  E  Q  P  L  E  A  T  M  K  K  V  E  *  Y  L  S  F  K  K  N  K  L  S  I  S  L  K  L  L  V  P  C  I  F  *  D  R   : G  F  C  Q  L  R  K  I  E  G  *  R  R  S  I  K  T  F  K  Q  *  L  E  E  *  L  I  K  E  *  R  H  *  K  Q  G  R  P  I  L  M  T  Y  *  G  C  C  W  N  P  T  L  N  K  L  N  N  M  A  T  R  I  L  V  *  V  R  E  R  S  S  R  S  V  N  C  S  I  L  L  D  K  K  P  P  L  Y  C  L  Y  G  L  *  F  C  *  V  D  I  *  I  G  K  L  A  L  E  K  R  F  C  K  S  S  V  I  A  N  *  N  L  M  D  *  T  A  *  K  L :   *  Q  *  F  *  T  S  R  *  G  Y  I  H  Q  L  I  H  L  I  E  R  L  Q  P  I  P  S  *  G  N  *  V  Y  Q  L  E  *  C  S  Y  C  Q  *  F  Y  C  I  T  T  R  K  Y  G  A  K  M  Q  Q  S  S  S  Q  R  D  L  V  K  A  F  Q  R  Q  Q  R  V  K  *  R  F  S  H  L  A  G  D  L  G  Y  A  L  G  *  T  S  R  *  *  K  R  R  W  L  W  L  *  F  Y  N  T  S  P  L  N  Y  L  L  L  I  H  T  L  R  S  L  *  *  L  F  N  P  N  M  V  L  L  L  Y  C  I  N  C  K  L  A  L  L  S  *  S  I  L  H  L  W  S  L  L  L  F  D  S  K  S  T  S  S  I  S  T  Y  V  I  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44061" stop="43814"/>
                    <exon start="43609" stop="43225"/>
                    <exon start="43143" stop="42718"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1056</number_coding_nucleotides>
                  <number_encoded_amino_acids>352</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMVPAIHLSCTEMVSQWEESISTKGTSCEIDIWPYLQKLSSDVISRTAFGSNYEEGRMIFELQKEQAQHFIEATRTLYILGSRFLPTKKNRRMKEIDKNVQAMIRGIIDKRVKALKAGEANTDDLLGMLLESNFKQIEQHGNKDFGMSTREIIEECKLFYFAGQETTSVLLVWTMILLSRHLDWQTRAREEVLQVFGDSKLEFDGLNRLKIVTMILNESLRLYPPADSLNRKTTTNTKLGELSLPAGVMLVLPIILLHHDKEIWGEDATEFKPERFSEGVSKATKGQMTFFPFGGGPRICIGLNFTMIEAKMALAMILQHFSFELSPSYTHAPQSVITIQPQYGAPLILHKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="45125" e_stop="44684"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="45125" e_stop="44684" e_length="442"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45125" stop="44684"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCT</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  H  T  K  K  I  V  *  F  F  F  F  K  L  R  N  E  R  K  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  N  *  N  I  P  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  K  K  N  *  K  *  Q  I  Q  I  *  N  *  V  S  N  F  R  *  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  P  F  V  *  R  Q  G  H  N  E  P  L  L  *  L  G  V  Y  Q  L  Q  M  T  K  L  R  G  I  S  D  P  F  P  </first_frame>
            <second_frame>  Y  C  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  Q  K  K  *  F  N  F  F  S  L  N  *  G  M  K  E  K  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  I  K  I  Y  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  L  K  K  I  R  S  N  K  Y  K  F  K  T  K  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  G  K  G  I  M  S  H  F  Y  N  *  G  Y  I  S  S  K  *  Q  S  *  G  V  Y  Q  T  L  F  P </second_frame>
            <third_frame>   I  V  D  D  Q  I  F  S  S  N  T  K  L  N  Y  N  T  H  K  K  N  S  L  I  F  F  L  *  T  K  E  *  K  K  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  L  K  Y  T  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  *  K  K  L  E  V  T  N  T  N  L  K  L  S  F  *  L  P  L  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  A  R  A  *  *  A  T  F  I  T  R  G  I  S  A  P  N  D  K  V  K  G  Y  I  R  P  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0166A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="50750" PGL_stop="54799"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53495" e_stop="54190"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="53495" e_stop="54190" e_length="696"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53495" stop="54190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53495" stop="54163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53495" stop="54158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350595" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53495" stop="54096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339728" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAGTTTAAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATTACTAATTTTTCTCATTGAA</gDNA_template>
            <first_frame> I  F  L  I  L  D  E  G  G  H  F  Y  T  Y  *  A  L  F  N  F  V  W  S  Y  C  H  F  A  F  L  T  V  F  A  I  F  H  Y  K  H  N  I  N  L  *  L  R  S  H  F  I  H  L  *  L  M  L  Y  M  P  N  I  *  L  S  Y  F  L  S  L  I  L  Y  S  I  P  I  R  Q  N  V  V  F  V  L  F  *  L  T  L  S  C  *  M  I  Y  L  *  E  S  L  K  K  *  H  T  S  V  H  I  G  V  I  I  *  N  V  L  C  Q  S  *  N  R  A  S  K  M  R  L  S  *  S  L  M  L  P  H  F  F  H  F  V  L  Y  K  L  C  D  V  I  M  C  *  Q  V  I  F  Y  Q  R  *  S  R  R  S  K  H  E  R  C  I  C  F  C  L  I  L  Y  S  M  *  M  Y  I  I  S  I  P  T  Y  E  N  V  K  L  S  K  Y  L  T  S  T  F  S  S  M  T  F  T  *  K  Y  I  M  N  K  F  G  S  Y  N  V  F  E  L  L  I  F  L  I  E </first_frame>
            <second_frame>  F  S  *  S  W  M  R  V  V  I  F  T  P  I  E  L  C  S  T  L  F  G  H  I  V  T  L  L  S  *  L  F  L  Q  S  F  T  I  N  I  I  L  I  F  N  *  D  L  I  S  Y  I  C  N  *  C  F  T  C  Q  T  F  D  F  L  I  F  F  H  *  F  S  I  L  F  Q  Y  D  K  M  *  C  L  C  Y  S  D  *  H  Y  L  A  K  *  S  I  Y  E  R  V  *  K  N  N  I  L  L  F  I  L  V  L  L  Y  K  M  S  Y  V  N  R  E  I  G  L  Q  R  *  G  L  V  E  A  *  C  C  H  I  F  S  I  L  S  C  I  S  Y  V  M  *  L  C  A  N  R  *  F  F  I  K  D  D  P  E  D  P  S  M  K  D  V  S  V  F  V  *  F  Y  T  V  C  K  C  I  *  L  V  F  P  H  M  K  M  L  N  *  V  S  I  S  L  R  H  S  V  V  *  H  S  H  E  N  I  L  *  T  N  L  A  A  I  M  C  S  N  Y  *  F  F  S  L   </second_frame>
            <third_frame>   F  L  N  L  G  *  G  W  S  F  L  H  L  L  S  F  V  Q  L  C  L  V  I  L  S  L  C  F  L  D  C  F  C  N  L  S  L  *  T  *  Y  *  S  L  T  K  I  S  F  H  T  F  V  I  D  A  L  H  A  K  H  L  T  F  L  F  S  F  T  N  S  L  F  Y  S  N  T  T  K  C  S  V  C  A  I  L  I  D  I  I  L  L  N  D  L  F  M  R  E  F  K  K  I  T  Y  F  C  S  Y  W  C  Y  Y  I  K  C  L  M  S  I  V  K  *  G  F  K  D  E  A  *  L  K  L  N  V  A  T  F  F  P  F  C  L  V  *  V  M  *  C  D  Y  V  L  T  G  D  F  L  S  K  M  I  Q  K  I  Q  A  *  K  M  Y  L  F  L  S  N  S  I  Q  Y  V  N  V  Y  N  *  Y  S  H  I  *  K  C  *  T  K  *  V  S  H  F  D  I  Q  *  Y  D  I  H  M  K  I  Y  Y  E  Q  I  W  Q  L  *  C  V  R  I  T  N  F  S  H  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53623" stop="53865"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLTKISFHTFVIDALHAKHLTFLFSFTNSLFYSNTTKCSVCAILIDIILLNDLFMREFKKITYFCSYWCYYIKCLMSIVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="50750" e_stop="50799"/>
            <exon e_start="50975" e_stop="51035"/>
            <exon e_start="53960" e_stop="54175"/>
            <exon e_start="54770" e_stop="54799"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.981"/>
          <exon-only e_score="0.700"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50750" e_stop="50799" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.924">
            <gDNA_intron_boundary i_start="50800" i_stop="50974" i_length="175"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50975" e_stop="51035" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="1.000">
            <gDNA_intron_boundary i_start="51036" i_stop="53959" i_length="2924"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="53960" e_stop="54175" e_length="216"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="54176" i_stop="54769" i_length="594"/>
          </intron>
          <exon e_serial="4" e_score="0.700">
            <gDNA_exon_boundary e_start="54770" e_stop="54799" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50750" stop="50799"/>
              <exon start="50975" stop="51035"/>
              <exon start="53960" stop="54175"/>
              <exon start="54770" stop="54799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723486" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCTCTCTTCTTTCAACAACCATTAATCGATTTGCAATTCAAAATTTCAG : GGAGAGTTTTTCTCAAAAATATATGATGTTGGTGACGAATTGACAAATGCACTGGAGGAAT : GTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATTACTA : AATTAAATCAAACAAAAATAAAAGACAAGA</gDNA_template>
            <first_frame> S  S  L  L  S  T  T  I  N  R  F  A  I  Q  N  F  R :   E  S  F  S  Q  K  Y  M  M  L  V  T  N  *  Q  M  H  W  R  N  :  V  I  F  Y  Q  R  *  S  R  R  S  K  H  E  R  C  I  C  F  C  L  I  L  Y  S  M  *  M  Y  I  I  S  I  P  T  Y  E  N  V  K  L  S  K  Y  L  T  S  T  F  S  S  M  T  F  T  *  K  Y  I  M  N  K  F  G  S  Y  N  V  F  E  L  L  :  N  *  I  K  Q  K  *  K  T  R </first_frame>
            <second_frame>  A  L  F  F  Q  Q  P  L  I  D  L  Q  F  K  I  S   : G  R  V  F  L  K  N  I  *  C  W  *  R  I  D  K  C  T  G  G  M :   *  F  F  I  K  D  D  P  E  D  P  S  M  K  D  V  S  V  F  V  *  F  Y  T  V  C  K  C  I  *  L  V  F  P  H  M  K  M  L  N  *  V  S  I  S  L  R  H  S  V  V  *  H  S  H  E  N  I  L  *  T  N  L  A  A  I  M  C  S  N  Y  * :   I  K  S  N  K  N  K  R  Q   </second_frame>
            <third_frame>   L  S  S  F  N  N  H  *  S  I  C  N  S  K  F  Q  :  G  E  F  F  S  K  I  Y  D  V  G  D  E  L  T  N  A  L  E  E   : C  D  F  L  S  K  M  I  Q  K  I  Q  A  *  K  M  Y  L  F  L  S  N  S  I  Q  Y  V  N  V  Y  N  *  Y  S  H  I  *  K  C  *  T  K  *  V  S  H  F  D  I  Q  *  Y  D  I  H  M  K  I  Y  Y  E  Q  I  W  Q  L  *  C  V  R  I  T   : K  L  N  Q  T  K  I  K  D  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0166A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="54170" PGL_stop="53510"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54170" e_stop="53510"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="54170" e_stop="53510" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54170" stop="53510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352390" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCGAACACATTATAGCTGCCAAATTTGTTCATAATATATTTTCATGTGAATGTCATACTACTGAATGTCGAAGTGAGATACTTACTTAGTTTAACATTTTCATATGTGGGAATACTAATTATATACATTTACATACTGTATAGAATTAGACAAAAACAGATACATCTTTCATGCTTGGATCTTCTGGATCATCTTTGATAAAAAATCACCTGTTAGCACATAATCACATCACATAACTTATACAAGACAAAATGGAAAAAATGTGGCAACATTAAGCTTCAACTAAGCCTCATCTTTGAAGCCCTATTTCACGATTGACATAAGACATTTTATATAATAACACCAATATGAACAGAAGTATGTTATTTTTTTAAACTCTCTCATAAATAGATCATTTAGCAAGATAATGTCAATCAGAATAGCACAAACACTACATTTTGTCGTATTGGAATAGAATAGAGAATTAGTGAAAGAAAATAAGAAAGTCAAATGTTTGGCATGTAAAGCATCAATTACAAATGTATGAAATGAGATCTTAGTTAAAGATTAATATTATGTTTATAGTGAAAGATTGCAAAAACAGTCAAGAAAGCAAAGTGACAATATGACCAAACAAAGTTGAACAAAGCTCAATAGGTGTAAAAATGACCACCCTCATC</gDNA_template>
            <first_frame> I  R  T  H  Y  S  C  Q  I  C  S  *  Y  I  F  M  *  M  S  Y  Y  *  M  S  K  *  D  T  Y  L  V  *  H  F  H  M  W  E  Y  *  L  Y  T  F  T  Y  C  I  E  L  D  K  N  R  Y  I  F  H  A  W  I  F  W  I  I  F  D  K  K  S  P  V  S  T  *  S  H  H  I  T  Y  T  R  Q  N  G  K  N  V  A  T  L  S  F  N  *  A  S  S  L  K  P  Y  F  T  I  D  I  R  H  F  I  *  *  H  Q  Y  E  Q  K  Y  V  I  F  L  N  S  L  I  N  R  S  F  S  K  I  M  S  I  R  I  A  Q  T  L  H  F  V  V  L  E  *  N  R  E  L  V  K  E  N  K  K  V  K  C  L  A  C  K  A  S  I  T  N  V  *  N  E  I  L  V  K  D  *  Y  Y  V  Y  S  E  R  L  Q  K  Q  S  R  K  Q  S  D  N  M  T  K  Q  S  *  T  K  L  N  R  C  K  N  D  H  P  H  </first_frame>
            <second_frame>  F  E  H  I  I  A  A  K  F  V  H  N  I  F  S  C  E  C  H  T  T  E  C  R  S  E  I  L  T  *  F  N  I  F  I  C  G  N  T  N  Y  I  H  L  H  T  V  *  N  *  T  K  T  D  T  S  F  M  L  G  S  S  G  S  S  L  I  K  N  H  L  L  A  H  N  H  I  T  *  L  I  Q  D  K  M  E  K  M  W  Q  H  *  A  S  T  K  P  H  L  *  S  P  I  S  R  L  T  *  D  I  L  Y  N  N  T  N  M  N  R  S  M  L  F  F  *  T  L  S  *  I  D  H  L  A  R  *  C  Q  S  E  *  H  K  H  Y  I  L  S  Y  W  N  R  I  E  N  *  *  K  K  I  R  K  S  N  V  W  H  V  K  H  Q  L  Q  M  Y  E  M  R  S  *  L  K  I  N  I  M  F  I  V  K  D  C  K  N  S  Q  E  S  K  V  T  I  *  P  N  K  V  E  Q  S  S  I  G  V  K  M  T  T  L  I </second_frame>
            <third_frame>   S  N  T  L  *  L  P  N  L  F  I  I  Y  F  H  V  N  V  I  L  L  N  V  E  V  R  Y  L  L  S  L  T  F  S  Y  V  G  I  L  I  I  Y  I  Y  I  L  Y  R  I  R  Q  K  Q  I  H  L  S  C  L  D  L  L  D  H  L  *  *  K  I  T  C  *  H  I  I  T  S  H  N  L  Y  K  T  K  W  K  K  C  G  N  I  K  L  Q  L  S  L  I  F  E  A  L  F  H  D  *  H  K  T  F  Y  I  I  T  P  I  *  T  E  V  C  Y  F  F  K  L  S  H  K  *  I  I  *  Q  D  N  V  N  Q  N  S  T  N  T  T  F  C  R  I  G  I  E  *  R  I  S  E  R  K  *  E  S  Q  M  F  G  M  *  S  I  N  Y  K  C  M  K  *  D  L  S  *  R  L  I  L  C  L  *  *  K  I  A  K  T  V  K  K  A  K  *  Q  Y  D  Q  T  K  L  N  K  A  Q  *  V  *  K  *  P  P  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0166A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="62407" PGL_stop="66241"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62407" e_stop="62738"/>
            <exon e_start="64342" e_stop="64562"/>
            <exon e_start="64645" e_stop="64889"/>
            <exon e_start="64999" e_stop="65383"/>
            <exon e_start="65535" e_stop="66166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.320" e_score="0.968"/>
          <exon-intron don_prob="0.999" acc_prob="0.763" e_score="0.965"/>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="0.976"/>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="62407" e_stop="62738" e_length="332"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.320">
            <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="64342" e_stop="64562" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.763">
            <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="64645" e_stop="64889" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64999" e_stop="65383" e_length="385"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="65535" e_stop="66166" e_length="632"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62407" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62407" stop="62738"/>
              <exon start="64342" stop="64540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62429" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62444" stop="62738"/>
              <exon start="64342" stop="64486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62452" stop="62738"/>
              <exon start="64342" stop="64403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62456" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62457" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62457" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62634" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62663" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64373" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64810" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65270" stop="65383"/>
              <exon start="65535" stop="66089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427770" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65300" stop="65383"/>
              <exon start="65535" stop="66166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65650" stop="66086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309595" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAAAGCAAGTGAGAGAACCCCTTTCAATGGAGTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG : GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAG : CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG : GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA : GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTT</gDNA_template>
            <first_frame> E  K  A  S  E  R  T  P  F  N  G  V  F  I  I  Y  E  I  N  G  D  F  L  Q  H  N  Y  N  N  N  L  C  C  N  F  V  V  L  Y  M  E  S  V  E  L  G  M  V  W  T  K  K  I  G  K  L  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  I  D  K  K  Y  S  *  S  *  I  *  A  N  Q  F  L  *  *  Y  S  S  K  T  H  P  F  F  P  Q  L  H  Q  Q  K  W :   *  K  F  F  H  L  A  R  P  L  S  N  R  V  D  H  E  T  *  T  C  K  G  D  F  H  K  E  L  C  V  S  K  A  N  S  S  Q  S  I  H  Q  V  I  G  *  R  S  C  *  P  *  G  G  Q  M  G  Q  T  Q  K  D  H  Q  S  Y  L  P  C  R  E  A  K   : A  Y  A  A  S  I  L  R  V  L  *  *  N  D  K  Q  M  G  G  D  C  S  K  G  N  I  N  R  D  R  C  M  A  R  P  *  K  D  D  Q  *  S  H  F  S  H  S  I  W  E  *  L  *  R  R  K  N  S  I  *  T  S  E  G  T  S  *  A  C  N  G  S  S  T  F  N  L  H  T  W  I  *  :  V  L  T  Y  K  K  K  Q  K  N  A  G  N  *  K  G  N  S  N  N  N  *  A  Y  H  *  Q  E  I  E  G  N  G  R  R  G  D  *  *  R  *  L  T  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  N  D  N  S  *  S  D  *  R  V  Q  V  I  L  F  C  W  T  R  D  H  F  S  V  A  R  M  D  N  D  F  V  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  V  A  G  I  W  K  *  *  T  R  F  G  R  T  R  S  L  E  N   : S  D  H  D  L  V  *  D  A  K  A  I  P  P  I  T  N  I  W  *  N  E  *  R  R  S  E  I  G  G  I  K  S  T  S  W  S  D  T  H  S  T  R  N  L  S  T  L  *  *  G  N  M  G  *  R  R  K  G  I  Q  T  R  K  I  *  *  R  S  V  K  G  N  Q  R  T  I  L  V  Y  P  I  W  R  R  A  A  N  L  H  W  T  K  L  C  N  D  G  S  K  N  G  I  S  N  D  T  T  K  V  L  L  R  T  L  S  I  I  Y  T  C  S  I  C  S  S  D  Y  S  S  S  V  W  C  S  S  A  Y  A  Q  T  L  R  *  Y  F  T  P  F  V  L  Y  C  R  Y  *  F  V  T  *  C  L  K  S  C  F  E  F  K  R  L  T  L  N  C  S  L  V  I  I  I  K  I  Y  W  S  S  L  M  N  F  I  L  P  L  G  G  A  K  V  S  S  S  *  S  C  V  A  Y  T  F </first_frame>
            <second_frame>  R  K  Q  V  R  E  P  L  S  M  E  F  L  S  F  M  R  S  M  E  I  S  Y  N  I  I  I  T  T  I  C  V  V  I  L  L  F  Y  T  W  K  V  L  N  W  A  W  F  G  P  K  K  L  E  N  C  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  N  S  I  N  K  N   : G  K  S  S  F  I  W  L  G  P  Y  P  I  V  L  I  T  K  P  E  H  V  K  E  I  F  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  T  K  L  L  A  K  G  L  V  S  L  E  E  D  K  W  A  K  H  R  K  I  I  N  P  T  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  V  C  C  S  E  M  I  S  K  W  E  E  I  V  P  K  G  T  S  T  E  I  D  V  W  P  D  L  E  K  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  K  E  Q  A  E  H  V  M  E  V  A  R  S  I  Y  I  P  G  S  R :   F  L  P  T  K  R  N  K  R  M  L  E  I  E  K  E  I  Q  T  T  I  R  R  I  I  D  K  R  L  R  A  M  E  G  G  E  T  S  K  D  D  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  S  K  D  F  G  M  T  T  V  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  D  K  P  D  L  E  G  L  G  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  T  F  G  R  T  N  K  E  E  V  K  L  G  E  L  N  L  P  A  G  V  I  L  I  V  P  A  I  L  V  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  F  S  F  I  P  F  G  G  G  P  R  I  C  I  G  Q  N  F  A  M  M  E  A  K  M  A  L  A  M  I  L  Q  R  F  S  F  E  L  S  P  S  Y  T  H  A  P  F  A  V  V  T  I  H  P  Q  Y  G  A  P  L  L  M  R  K  L  *  D  D  I  L  H  H  S  C  C  I  V  D  T  N  L  S  H  D  V  *  S  H  A  L  N  L  N  V  *  R  *  I  A  A  W  L  S  L  S  K  F  I  G  H  L  *  *  T  S  Y  C  L  L  V  E  Q  K  F  L  L  L  K  V  V  *  H  I  L   </second_frame>
            <third_frame>   E  S  K  *  E  N  P  F  Q  W  S  F  Y  H  L  *  D  Q  W  R  F  L  T  T  *  L  *  Q  Q  F  V  L  *  F  C  C  S  I  H  G  K  C  *  I  G  H  G  L  D  Q  K  N  W  K  I  A  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  *  Q  K  V  *  L  K  L  N  L  S  Q  S  I  S  L  M  I  *  L  K  D  S  S  L  F  S  S  T  P  S  T  K  M  :  V  K  V  L  S  S  G  *  A  P  I  Q  S  C  *  S  R  N  L  N  M  *  R  R  F  S  Q  R  I  M  C  I  *  S  K  L  I  P  I  H  S  P  S  Y  W  L  K  V  L  L  A  L  R  R  T  N  G  P  N  T  E  R  S  S  I  L  P  S  M  S  R  S  *  S :   I  C  C  Q  H  F  T  C  V  V  V  K  *  *  A  N  G  R  R  L  F  Q  R  E  H  Q  P  R  S  M  Y  G  Q  T  L  K  R  *  P  V  K  S  F  L  A  Q  H  L  G  V  A  M  K  K  E  E  *  Y  L  N  F  R  R  N  K  L  S  M  *  W  K  *  H  V  Q  F  T  Y  L  D  L   : G  S  Y  L  Q  K  E  T  K  E  C  W  K  L  K  R  K  F  K  Q  Q  L  G  V  S  L  T  R  D  *  G  Q  W  K  E  G  R  L  V  K  M  T  Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  A  K  I  S  E  *  Q  Q  L  K  *  L  K  S  A  S  Y  S  I  L  L  D  K  R  P  L  Q  C  C  S  Y  G  Q  *  F  C  C  A  Y  I  P  S  G  K  Y  V  P  E  R  R  C  C  R  Y  L  E  M  I  N  Q  I  W  K  D  *  V  A  *  K  * :   *  P  *  S  C  M  R  R  *  G  Y  S  P  H  Y  Q  H  L  V  E  R  I  K  K  K  *  N  W  G  N  *  I  Y  Q  L  E  *  Y  S  *  Y  P  Q  S  *  Y  I  M  I  R  K  Y  G  V  K  T  Q  R  N  S  N  Q  K  D  L  V  K  E  C  Q  R  Q  P  K  D  N  S  R  L  S  H  L  E  E  G  R  E  F  A  L  D  K  T  L  Q  *  W  K  Q  K  W  H  *  Q  *  Y  Y  K  G  S  P  S  N  S  L  H  H  I  H  M  L  H  L  Q  *  *  L  F  I  L  S  M  V  L  L  C  L  C  A  N  S  K  M  I  F  Y  T  I  R  V  V  L  S  I  L  I  C  H  M  M  S  E  V  M  L  *  I  *  T  F  N  V  K  L  Q  L  G  Y  H  Y  Q  N  L  L  V  I  S  D  E  L  H  I  A  S  W  W  S  K  S  F  F  F  L  K  L  C  S  I  Y  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62408" stop="62738"/>
                    <exon start="64342" stop="64562"/>
                    <exon start="64645" stop="64889"/>
                    <exon start="64999" stop="65383"/>
                    <exon start="65535" stop="65960"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1605</number_coding_nucleotides>
                  <number_encoded_amino_acids>535</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKQVREPLSMEFLSFMRSMEISYNIIITTICVVILLFYTWKVLNWAWFGPKKLENCLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKPINFSDDIAQRLIPFFLNSINKNGKSSFIWLGPYPIVLITKPEHVKEIFTKNYVYLKQTHPNPFTKLLAKGLVSLEEDKWAKHRKIINPTFHVEKLKHMLPAFYVCCSEMISKWEEIVPKGTSTEIDVWPDLEKMTSEVISRTAFGSSYEEGRIVFELQKEQAEHVMEVARSIYIPGSRFLPTKRNKRMLEIEKEIQTTIRRIIDKRLRAMEGGETSKDDLLGILLESNMKEIEQHGSKDFGMTTVEVIEECKLFYFAGQETTSVLLVWTMILLCLHPEWQVRAREEVLQVFGNDKPDLEGLGRLKIVTMILYETLRLFPPLPTFGRTNKEEVKLGELNLPAGVILIVPAILVHYDKEIWGEDAKEFKPERFSEGVSKATKGQFSFIPFGGGPRICIGQNFAMMEAKMALAMILQRFSFELSPSYTHAPFAVVTIHPQYGAPLLMRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="62407" e_stop="62738"/>
            <exon e_start="64342" e_stop="64562"/>
            <exon e_start="64645" e_stop="64889"/>
            <exon e_start="64999" e_stop="65383"/>
            <exon e_start="65535" e_stop="66079"/>
            <exon e_start="66209" e_stop="66241"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.320" e_score="0.968"/>
          <exon-intron don_prob="0.999" acc_prob="0.763" e_score="0.965"/>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="0.976"/>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.874" e_score="0.956"/>
          <exon-only e_score="0.515"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="62407" e_stop="62738" e_length="332"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.320">
            <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="64342" e_stop="64562" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.763">
            <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="64645" e_stop="64889" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64999" e_stop="65383" e_length="385"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151"/>
          </intron>
          <exon e_serial="5" e_score="0.956">
            <gDNA_exon_boundary e_start="65535" e_stop="66079" e_length="545"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.874">
            <gDNA_intron_boundary i_start="66080" i_stop="66208" i_length="129"/>
          </intron>
          <exon e_serial="6" e_score="0.515">
            <gDNA_exon_boundary e_start="66209" e_stop="66241" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62407" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62407" stop="62738"/>
              <exon start="64342" stop="64540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62429" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62444" stop="62738"/>
              <exon start="64342" stop="64486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62452" stop="62738"/>
              <exon start="64342" stop="64403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62456" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62457" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62457" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62634" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62663" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64373" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64810" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65372" stop="65383"/>
              <exon start="65535" stop="66079"/>
              <exon start="66209" stop="66241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414697" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65824" stop="66079"/>
              <exon start="66209" stop="66241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474294" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAAAGCAAGTGAGAGAACCCCTTTCAATGGAGTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG : GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAG : CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG : GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA : GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAA : GAATCAACCAAAACAACTACTGCTAAGTTTCTA</gDNA_template>
            <first_frame> E  K  A  S  E  R  T  P  F  N  G  V  F  I  I  Y  E  I  N  G  D  F  L  Q  H  N  Y  N  N  N  L  C  C  N  F  V  V  L  Y  M  E  S  V  E  L  G  M  V  W  T  K  K  I  G  K  L  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  I  D  K  K  Y  S  *  S  *  I  *  A  N  Q  F  L  *  *  Y  S  S  K  T  H  P  F  F  P  Q  L  H  Q  Q  K  W :   *  K  F  F  H  L  A  R  P  L  S  N  R  V  D  H  E  T  *  T  C  K  G  D  F  H  K  E  L  C  V  S  K  A  N  S  S  Q  S  I  H  Q  V  I  G  *  R  S  C  *  P  *  G  G  Q  M  G  Q  T  Q  K  D  H  Q  S  Y  L  P  C  R  E  A  K   : A  Y  A  A  S  I  L  R  V  L  *  *  N  D  K  Q  M  G  G  D  C  S  K  G  N  I  N  R  D  R  C  M  A  R  P  *  K  D  D  Q  *  S  H  F  S  H  S  I  W  E  *  L  *  R  R  K  N  S  I  *  T  S  E  G  T  S  *  A  C  N  G  S  S  T  F  N  L  H  T  W  I  *  :  V  L  T  Y  K  K  K  Q  K  N  A  G  N  *  K  G  N  S  N  N  N  *  A  Y  H  *  Q  E  I  E  G  N  G  R  R  G  D  *  *  R  *  L  T  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  N  D  N  S  *  S  D  *  R  V  Q  V  I  L  F  C  W  T  R  D  H  F  S  V  A  R  M  D  N  D  F  V  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  V  A  G  I  W  K  *  *  T  R  F  G  R  T  R  S  L  E  N   : S  D  H  D  L  V  *  D  A  K  A  I  P  P  I  T  N  I  W  *  N  E  *  R  R  S  E  I  G  G  I  K  S  T  S  W  S  D  T  H  S  T  R  N  L  S  T  L  *  *  G  N  M  G  *  R  R  K  G  I  Q  T  R  K  I  *  *  R  S  V  K  G  N  Q  R  T  I  L  V  Y  P  I  W  R  R  A  A  N  L  H  W  T  K  L  C  N  D  G  S  K  N  G  I  S  N  D  T  T  K  V  L  L  R  T  L  S  I  I  Y  T  C  S  I  C  S  S  D  Y  S  S  S  V  W  C  S  S  A  Y  A  Q  T  L  R  *  Y  F  T  P  F  V  L  Y  C  R  Y  *  F  V  T  *  C  L  K  S  C  F  E  F  K  R  L  T  L  N  C  S  L  V  I  I  I  K  :  E  S  T  K  T  T  T  A  K  F  L </first_frame>
            <second_frame>  R  K  Q  V  R  E  P  L  S  M  E  F  L  S  F  M  R  S  M  E  I  S  Y  N  I  I  I  T  T  I  C  V  V  I  L  L  F  Y  T  W  K  V  L  N  W  A  W  F  G  P  K  K  L  E  N  C  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  N  S  I  N  K  N   : G  K  S  S  F  I  W  L  G  P  Y  P  I  V  L  I  T  K  P  E  H  V  K  E  I  F  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  T  K  L  L  A  K  G  L  V  S  L  E  E  D  K  W  A  K  H  R  K  I  I  N  P  T  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  V  C  C  S  E  M  I  S  K  W  E  E  I  V  P  K  G  T  S  T  E  I  D  V  W  P  D  L  E  K  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  K  E  Q  A  E  H  V  M  E  V  A  R  S  I  Y  I  P  G  S  R :   F  L  P  T  K  R  N  K  R  M  L  E  I  E  K  E  I  Q  T  T  I  R  R  I  I  D  K  R  L  R  A  M  E  G  G  E  T  S  K  D  D  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  S  K  D  F  G  M  T  T  V  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  D  K  P  D  L  E  G  L  G  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  T  F  G  R  T  N  K  E  E  V  K  L  G  E  L  N  L  P  A  G  V  I  L  I  V  P  A  I  L  V  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  F  S  F  I  P  F  G  G  G  P  R  I  C  I  G  Q  N  F  A  M  M  E  A  K  M  A  L  A  M  I  L  Q  R  F  S  F  E  L  S  P  S  Y  T  H  A  P  F  A  V  V  T  I  H  P  Q  Y  G  A  P  L  L  M  R  K  L  *  D  D  I  L  H  H  S  C  C  I  V  D  T  N  L  S  H  D  V  *  S  H  A  L  N  L  N  V  *  R  *  I  A  A  W  L  S  L  S  K :   N  Q  P  K  Q  L  L  L  S  F   </second_frame>
            <third_frame>   E  S  K  *  E  N  P  F  Q  W  S  F  Y  H  L  *  D  Q  W  R  F  L  T  T  *  L  *  Q  Q  F  V  L  *  F  C  C  S  I  H  G  K  C  *  I  G  H  G  L  D  Q  K  N  W  K  I  A  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  *  Q  K  V  *  L  K  L  N  L  S  Q  S  I  S  L  M  I  *  L  K  D  S  S  L  F  S  S  T  P  S  T  K  M  :  V  K  V  L  S  S  G  *  A  P  I  Q  S  C  *  S  R  N  L  N  M  *  R  R  F  S  Q  R  I  M  C  I  *  S  K  L  I  P  I  H  S  P  S  Y  W  L  K  V  L  L  A  L  R  R  T  N  G  P  N  T  E  R  S  S  I  L  P  S  M  S  R  S  *  S :   I  C  C  Q  H  F  T  C  V  V  V  K  *  *  A  N  G  R  R  L  F  Q  R  E  H  Q  P  R  S  M  Y  G  Q  T  L  K  R  *  P  V  K  S  F  L  A  Q  H  L  G  V  A  M  K  K  E  E  *  Y  L  N  F  R  R  N  K  L  S  M  *  W  K  *  H  V  Q  F  T  Y  L  D  L   : G  S  Y  L  Q  K  E  T  K  E  C  W  K  L  K  R  K  F  K  Q  Q  L  G  V  S  L  T  R  D  *  G  Q  W  K  E  G  R  L  V  K  M  T  Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  A  K  I  S  E  *  Q  Q  L  K  *  L  K  S  A  S  Y  S  I  L  L  D  K  R  P  L  Q  C  C  S  Y  G  Q  *  F  C  C  A  Y  I  P  S  G  K  Y  V  P  E  R  R  C  C  R  Y  L  E  M  I  N  Q  I  W  K  D  *  V  A  *  K  * :   *  P  *  S  C  M  R  R  *  G  Y  S  P  H  Y  Q  H  L  V  E  R  I  K  K  K  *  N  W  G  N  *  I  Y  Q  L  E  *  Y  S  *  Y  P  Q  S  *  Y  I  M  I  R  K  Y  G  V  K  T  Q  R  N  S  N  Q  K  D  L  V  K  E  C  Q  R  Q  P  K  D  N  S  R  L  S  H  L  E  E  G  R  E  F  A  L  D  K  T  L  Q  *  W  K  Q  K  W  H  *  Q  *  Y  Y  K  G  S  P  S  N  S  L  H  H  I  H  M  L  H  L  Q  *  *  L  F  I  L  S  M  V  L  L  C  L  C  A  N  S  K  M  I  F  Y  T  I  R  V  V  L  S  I  L  I  C  H  M  M  S  E  V  M  L  *  I  *  T  F  N  V  K  L  Q  L  G  Y  H  Y  Q   : R  I  N  Q  N  N  Y  C  *  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62408" stop="62738"/>
                    <exon start="64342" stop="64562"/>
                    <exon start="64645" stop="64889"/>
                    <exon start="64999" stop="65383"/>
                    <exon start="65535" stop="65960"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1605</number_coding_nucleotides>
                  <number_encoded_amino_acids>535</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKQVREPLSMEFLSFMRSMEISYNIIITTICVVILLFYTWKVLNWAWFGPKKLENCLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKPINFSDDIAQRLIPFFLNSINKNGKSSFIWLGPYPIVLITKPEHVKEIFTKNYVYLKQTHPNPFTKLLAKGLVSLEEDKWAKHRKIINPTFHVEKLKHMLPAFYVCCSEMISKWEEIVPKGTSTEIDVWPDLEKMTSEVISRTAFGSSYEEGRIVFELQKEQAEHVMEVARSIYIPGSRFLPTKRNKRMLEIEKEIQTTIRRIIDKRLRAMEGGETSKDDLLGILLESNMKEIEQHGSKDFGMTTVEVIEECKLFYFAGQETTSVLLVWTMILLCLHPEWQVRAREEVLQVFGNDKPDLEGLGRLKIVTMILYETLRLFPPLPTFGRTNKEEVKLGELNLPAGVILIVPAILVHYDKEIWGEDAKEFKPERFSEGVSKATKGQFSFIPFGGGPRICIGQNFAMMEAKMALAMILQRFSFELSPSYTHAPFAVVTIHPQYGAPLLMRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="62407" e_stop="62738"/>
            <exon e_start="64342" e_stop="64562"/>
            <exon e_start="64645" e_stop="64889"/>
            <exon e_start="64999" e_stop="65383"/>
            <exon e_start="65535" e_stop="66074"/>
            <exon e_start="66209" e_stop="66224"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.320" e_score="0.968"/>
          <exon-intron don_prob="0.999" acc_prob="0.763" e_score="0.965"/>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="0.976"/>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.874" e_score="0.961"/>
          <exon-only e_score="0.625"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="62407" e_stop="62738" e_length="332"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.320">
            <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="64342" e_stop="64562" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.763">
            <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="64645" e_stop="64889" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64999" e_stop="65383" e_length="385"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151"/>
          </intron>
          <exon e_serial="5" e_score="0.961">
            <gDNA_exon_boundary e_start="65535" e_stop="66074" e_length="540"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.874">
            <gDNA_intron_boundary i_start="66075" i_stop="66208" i_length="134"/>
          </intron>
          <exon e_serial="6" e_score="0.625">
            <gDNA_exon_boundary e_start="66209" e_stop="66224" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62407" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62407" stop="62738"/>
              <exon start="64342" stop="64540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62429" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62440" stop="62738"/>
              <exon start="64342" stop="64536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62444" stop="62738"/>
              <exon start="64342" stop="64486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324733" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62452" stop="62738"/>
              <exon start="64342" stop="64403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62456" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62457" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62457" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62634" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62663" stop="62738"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64373" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64810" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65221" stop="65383"/>
              <exon start="65535" stop="66074"/>
              <exon start="66209" stop="66224"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603943" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAAAGCAAGTGAGAGAACCCCTTTCAATGGAGTTTTTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG : GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAG : CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG : GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA : GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTA : GAATCAACCAAAACAA</gDNA_template>
            <first_frame> E  K  A  S  E  R  T  P  F  N  G  V  F  I  I  Y  E  I  N  G  D  F  L  Q  H  N  Y  N  N  N  L  C  C  N  F  V  V  L  Y  M  E  S  V  E  L  G  M  V  W  T  K  K  I  G  K  L  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  I  D  K  K  Y  S  *  S  *  I  *  A  N  Q  F  L  *  *  Y  S  S  K  T  H  P  F  F  P  Q  L  H  Q  Q  K  W :   *  K  F  F  H  L  A  R  P  L  S  N  R  V  D  H  E  T  *  T  C  K  G  D  F  H  K  E  L  C  V  S  K  A  N  S  S  Q  S  I  H  Q  V  I  G  *  R  S  C  *  P  *  G  G  Q  M  G  Q  T  Q  K  D  H  Q  S  Y  L  P  C  R  E  A  K   : A  Y  A  A  S  I  L  R  V  L  *  *  N  D  K  Q  M  G  G  D  C  S  K  G  N  I  N  R  D  R  C  M  A  R  P  *  K  D  D  Q  *  S  H  F  S  H  S  I  W  E  *  L  *  R  R  K  N  S  I  *  T  S  E  G  T  S  *  A  C  N  G  S  S  T  F  N  L  H  T  W  I  *  :  V  L  T  Y  K  K  K  Q  K  N  A  G  N  *  K  G  N  S  N  N  N  *  A  Y  H  *  Q  E  I  E  G  N  G  R  R  G  D  *  *  R  *  L  T  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  N  D  N  S  *  S  D  *  R  V  Q  V  I  L  F  C  W  T  R  D  H  F  S  V  A  R  M  D  N  D  F  V  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  V  A  G  I  W  K  *  *  T  R  F  G  R  T  R  S  L  E  N   : S  D  H  D  L  V  *  D  A  K  A  I  P  P  I  T  N  I  W  *  N  E  *  R  R  S  E  I  G  G  I  K  S  T  S  W  S  D  T  H  S  T  R  N  L  S  T  L  *  *  G  N  M  G  *  R  R  K  G  I  Q  T  R  K  I  *  *  R  S  V  K  G  N  Q  R  T  I  L  V  Y  P  I  W  R  R  A  A  N  L  H  W  T  K  L  C  N  D  G  S  K  N  G  I  S  N  D  T  T  K  V  L  L  R  T  L  S  I  I  Y  T  C  S  I  C  S  S  D  Y  S  S  S  V  W  C  S  S  A  Y  A  Q  T  L  R  *  Y  F  T  P  F  V  L  Y  C  R  Y  *  F  V  T  *  C  L  K  S  C  F  E  F  K  R  L  T  L  N  C  S  L  V  I  I   : R  I  N  Q  N   </first_frame>
            <second_frame>  R  K  Q  V  R  E  P  L  S  M  E  F  L  S  F  M  R  S  M  E  I  S  Y  N  I  I  I  T  T  I  C  V  V  I  L  L  F  Y  T  W  K  V  L  N  W  A  W  F  G  P  K  K  L  E  N  C  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  N  S  I  N  K  N   : G  K  S  S  F  I  W  L  G  P  Y  P  I  V  L  I  T  K  P  E  H  V  K  E  I  F  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  T  K  L  L  A  K  G  L  V  S  L  E  E  D  K  W  A  K  H  R  K  I  I  N  P  T  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  V  C  C  S  E  M  I  S  K  W  E  E  I  V  P  K  G  T  S  T  E  I  D  V  W  P  D  L  E  K  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  K  E  Q  A  E  H  V  M  E  V  A  R  S  I  Y  I  P  G  S  R :   F  L  P  T  K  R  N  K  R  M  L  E  I  E  K  E  I  Q  T  T  I  R  R  I  I  D  K  R  L  R  A  M  E  G  G  E  T  S  K  D  D  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  S  K  D  F  G  M  T  T  V  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  D  K  P  D  L  E  G  L  G  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  T  F  G  R  T  N  K  E  E  V  K  L  G  E  L  N  L  P  A  G  V  I  L  I  V  P  A  I  L  V  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  F  S  F  I  P  F  G  G  G  P  R  I  C  I  G  Q  N  F  A  M  M  E  A  K  M  A  L  A  M  I  L  Q  R  F  S  F  E  L  S  P  S  Y  T  H  A  P  F  A  V  V  T  I  H  P  Q  Y  G  A  P  L  L  M  R  K  L  *  D  D  I  L  H  H  S  C  C  I  V  D  T  N  L  S  H  D  V  *  S  H  A  L  N  L  N  V  *  R  *  I  A  A  W  L  S  L  :  E  S  T  K  T  </second_frame>
            <third_frame>   E  S  K  *  E  N  P  F  Q  W  S  F  Y  H  L  *  D  Q  W  R  F  L  T  T  *  L  *  Q  Q  F  V  L  *  F  C  C  S  I  H  G  K  C  *  I  G  H  G  L  D  Q  K  N  W  K  I  A  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  *  Q  K  V  *  L  K  L  N  L  S  Q  S  I  S  L  M  I  *  L  K  D  S  S  L  F  S  S  T  P  S  T  K  M  :  V  K  V  L  S  S  G  *  A  P  I  Q  S  C  *  S  R  N  L  N  M  *  R  R  F  S  Q  R  I  M  C  I  *  S  K  L  I  P  I  H  S  P  S  Y  W  L  K  V  L  L  A  L  R  R  T  N  G  P  N  T  E  R  S  S  I  L  P  S  M  S  R  S  *  S :   I  C  C  Q  H  F  T  C  V  V  V  K  *  *  A  N  G  R  R  L  F  Q  R  E  H  Q  P  R  S  M  Y  G  Q  T  L  K  R  *  P  V  K  S  F  L  A  Q  H  L  G  V  A  M  K  K  E  E  *  Y  L  N  F  R  R  N  K  L  S  M  *  W  K  *  H  V  Q  F  T  Y  L  D  L   : G  S  Y  L  Q  K  E  T  K  E  C  W  K  L  K  R  K  F  K  Q  Q  L  G  V  S  L  T  R  D  *  G  Q  W  K  E  G  R  L  V  K  M  T  Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  A  K  I  S  E  *  Q  Q  L  K  *  L  K  S  A  S  Y  S  I  L  L  D  K  R  P  L  Q  C  C  S  Y  G  Q  *  F  C  C  A  Y  I  P  S  G  K  Y  V  P  E  R  R  C  C  R  Y  L  E  M  I  N  Q  I  W  K  D  *  V  A  *  K  * :   *  P  *  S  C  M  R  R  *  G  Y  S  P  H  Y  Q  H  L  V  E  R  I  K  K  K  *  N  W  G  N  *  I  Y  Q  L  E  *  Y  S  *  Y  P  Q  S  *  Y  I  M  I  R  K  Y  G  V  K  T  Q  R  N  S  N  Q  K  D  L  V  K  E  C  Q  R  Q  P  K  D  N  S  R  L  S  H  L  E  E  G  R  E  F  A  L  D  K  T  L  Q  *  W  K  Q  K  W  H  *  Q  *  Y  Y  K  G  S  P  S  N  S  L  H  H  I  H  M  L  H  L  Q  *  *  L  F  I  L  S  M  V  L  L  C  L  C  A  N  S  K  M  I  F  Y  T  I  R  V  V  L  S  I  L  I  C  H  M  M  S  E  V  M  L  *  I  *  T  F  N  V  K  L  Q  L  G  Y  H  * :   N  Q  P  K  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62408" stop="62738"/>
                    <exon start="64342" stop="64562"/>
                    <exon start="64645" stop="64889"/>
                    <exon start="64999" stop="65383"/>
                    <exon start="65535" stop="65960"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1605</number_coding_nucleotides>
                  <number_encoded_amino_acids>535</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKQVREPLSMEFLSFMRSMEISYNIIITTICVVILLFYTWKVLNWAWFGPKKLENCLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKPINFSDDIAQRLIPFFLNSINKNGKSSFIWLGPYPIVLITKPEHVKEIFTKNYVYLKQTHPNPFTKLLAKGLVSLEEDKWAKHRKIINPTFHVEKLKHMLPAFYVCCSEMISKWEEIVPKGTSTEIDVWPDLEKMTSEVISRTAFGSSYEEGRIVFELQKEQAEHVMEVARSIYIPGSRFLPTKRNKRMLEIEKEIQTTIRRIIDKRLRAMEGGETSKDDLLGILLESNMKEIEQHGSKDFGMTTVEVIEECKLFYFAGQETTSVLLVWTMILLCLHPEWQVRAREEVLQVFGNDKPDLEGLGRLKIVTMILYETLRLFPPLPTFGRTNKEEVKLGELNLPAGVILIVPAILVHYDKEIWGEDAKEFKPERFSEGVSKATKGQFSFIPFGGGPRICIGQNFAMMEAKMALAMILQRFSFELSPSYTHAPFAVVTIHPQYGAPLLMRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="62446" e_stop="62742"/>
            <exon e_start="63209" e_stop="63249"/>
            <exon e_start="64342" e_stop="64562"/>
            <exon e_start="64645" e_stop="64889"/>
            <exon e_start="64999" e_stop="65383"/>
            <exon e_start="65535" e_stop="66166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.426" acc_prob="0.000" e_score="0.960"/>
          <exon-intron don_prob="0.000" acc_prob="0.320" e_score="0.585"/>
          <exon-intron don_prob="0.999" acc_prob="0.763" e_score="0.950"/>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="0.976"/>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="62446" e_stop="62742" e_length="297"/>
          </exon>
          <intron i_serial="1" don_prob="0.426" acc_prob="0.000">
            <gDNA_intron_boundary i_start="62743" i_stop="63208" i_length="466"/>
          </intron>
          <exon e_serial="2" e_score="0.585">
            <gDNA_exon_boundary e_start="63209" e_stop="63249" e_length="41"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.320">
            <gDNA_intron_boundary i_start="63250" i_stop="64341" i_length="1092"/>
          </intron>
          <exon e_serial="3" e_score="0.950">
            <gDNA_exon_boundary e_start="64342" e_stop="64562" e_length="221"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.763">
            <gDNA_intron_boundary i_start="64563" i_stop="64644" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="64645" e_stop="64889" e_length="245"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64999" e_stop="65383" e_length="385"/>
          </exon>
          <intron i_serial="5" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151"/>
          </intron>
          <exon e_serial="6" e_score="0.994">
            <gDNA_exon_boundary e_start="65535" e_stop="66166" e_length="632"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62446" stop="62742"/>
              <exon start="63209" stop="63249"/>
              <exon start="64342" stop="64562"/>
              <exon start="64645" stop="64787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64373" stop="64562"/>
              <exon start="64645" stop="64889"/>
              <exon start="64999" stop="65210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64810" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="65841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65270" stop="65383"/>
              <exon start="65535" stop="66089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427770" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65300" stop="65383"/>
              <exon start="65535" stop="66166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65650" stop="66086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309595" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTAT : TTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTT : GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCTTGTTAGCCTTGAGGAGGACAAATGGGCCAAACACAGAAAGATCATCAATCCTACCTTCCATGTCGAGAAGCTAAAG : CATATGCTGCCAGCATTTTACGTGTGTTGTAGTGAAATGATAAGCAAATGGGAGGAGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG : GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA : GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTT</gDNA_template>
            <first_frame> I  I  Y  E  I  N  G  D  F  L  Q  H  N  Y  N  N  N  L  C  C  N  F  V  V  L  Y  M  E  S  V  E  L  G  M  V  W  T  K  K  I  G  K  L  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  I  D  K  K  Y  S  *  S  *  I  *  A  N  Q  F  L  *  *  Y  S  S  K  T  H  P  F  F  P  Q  L  H  Q  Q  K  W  Y  :  L  F  F  Y  V  V  L  I  L  G  Q  L  F  L :   *  K  F  F  H  L  A  R  P  L  S  N  R  V  D  H  E  T  *  T  C  K  G  D  F  H  K  E  L  C  V  S  K  A  N  S  S  Q  S  I  H  Q  V  I  G  *  R  S  C  *  P  *  G  G  Q  M  G  Q  T  Q  K  D  H  Q  S  Y  L  P  C  R  E  A  K   : A  Y  A  A  S  I  L  R  V  L  *  *  N  D  K  Q  M  G  G  D  C  S  K  G  N  I  N  R  D  R  C  M  A  R  P  *  K  D  D  Q  *  S  H  F  S  H  S  I  W  E  *  L  *  R  R  K  N  S  I  *  T  S  E  G  T  S  *  A  C  N  G  S  S  T  F  N  L  H  T  W  I  *  :  V  L  T  Y  K  K  K  Q  K  N  A  G  N  *  K  G  N  S  N  N  N  *  A  Y  H  *  Q  E  I  E  G  N  G  R  R  G  D  *  *  R  *  L  T  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  N  D  N  S  *  S  D  *  R  V  Q  V  I  L  F  C  W  T  R  D  H  F  S  V  A  R  M  D  N  D  F  V  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  V  A  G  I  W  K  *  *  T  R  F  G  R  T  R  S  L  E  N   : S  D  H  D  L  V  *  D  A  K  A  I  P  P  I  T  N  I  W  *  N  E  *  R  R  S  E  I  G  G  I  K  S  T  S  W  S  D  T  H  S  T  R  N  L  S  T  L  *  *  G  N  M  G  *  R  R  K  G  I  Q  T  R  K  I  *  *  R  S  V  K  G  N  Q  R  T  I  L  V  Y  P  I  W  R  R  A  A  N  L  H  W  T  K  L  C  N  D  G  S  K  N  G  I  S  N  D  T  T  K  V  L  L  R  T  L  S  I  I  Y  T  C  S  I  C  S  S  D  Y  S  S  S  V  W  C  S  S  A  Y  A  Q  T  L  R  *  Y  F  T  P  F  V  L  Y  C  R  Y  *  F  V  T  *  C  L  K  S  C  F  E  F  K  R  L  T  L  N  C  S  L  V  I  I  I  K  I  Y  W  S  S  L  M  N  F  I  L  P  L  G  G  A  K  V  S  S  S  *  S  C  V  A  Y  T  F </first_frame>
            <second_frame>  S  F  M  R  S  M  E  I  S  Y  N  I  I  I  T  T  I  C  V  V  I  L  L  F  Y  T  W  K  V  L  N  W  A  W  F  G  P  K  K  L  E  N  C  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  N  S  I  N  K  N  G  I :   C  S  F  M  W  S  *  F  *  V  N  Y  F   : C  K  S  S  F  I  W  L  G  P  Y  P  I  V  L  I  T  K  P  E  H  V  K  E  I  F  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  T  K  L  L  A  K  G  L  V  S  L  E  E  D  K  W  A  K  H  R  K  I  I  N  P  T  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  V  C  C  S  E  M  I  S  K  W  E  E  I  V  P  K  G  T  S  T  E  I  D  V  W  P  D  L  E  K  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  K  E  Q  A  E  H  V  M  E  V  A  R  S  I  Y  I  P  G  S  R :   F  L  P  T  K  R  N  K  R  M  L  E  I  E  K  E  I  Q  T  T  I  R  R  I  I  D  K  R  L  R  A  M  E  G  G  E  T  S  K  D  D  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  S  K  D  F  G  M  T  T  V  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  D  K  P  D  L  E  G  L  G  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  T  F  G  R  T  N  K  E  E  V  K  L  G  E  L  N  L  P  A  G  V  I  L  I  V  P  A  I  L  V  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  F  S  F  I  P  F  G  G  G  P  R  I  C  I  G  Q  N  F  A  M  M  E  A  K  M  A  L  A  M  I  L  Q  R  F  S  F  E  L  S  P  S  Y  T  H  A  P  F  A  V  V  T  I  H  P  Q  Y  G  A  P  L  L  M  R  K  L  *  D  D  I  L  H  H  S  C  C  I  V  D  T  N  L  S  H  D  V  *  S  H  A  L  N  L  N  V  *  R  *  I  A  A  W  L  S  L  S  K  F  I  G  H  L  *  *  T  S  Y  C  L  L  V  E  Q  K  F  L  L  L  K  V  V  *  H  I  L   </second_frame>
            <third_frame>   H  L  *  D  Q  W  R  F  L  T  T  *  L  *  Q  Q  F  V  L  *  F  C  C  S  I  H  G  K  C  *  I  G  H  G  L  D  Q  K  N  W  K  I  A  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  *  Q  K  V  *  L  K  L  N  L  S  Q  S  I  S  L  M  I  *  L  K  D  S  S  L  F  S  S  T  P  S  T  K  M  V   : F  V  L  L  C  G  P  D  F  R  S  I  I  F  :  V  K  V  L  S  S  G  *  A  P  I  Q  S  C  *  S  R  N  L  N  M  *  R  R  F  S  Q  R  I  M  C  I  *  S  K  L  I  P  I  H  S  P  S  Y  W  L  K  V  L  L  A  L  R  R  T  N  G  P  N  T  E  R  S  S  I  L  P  S  M  S  R  S  *  S :   I  C  C  Q  H  F  T  C  V  V  V  K  *  *  A  N  G  R  R  L  F  Q  R  E  H  Q  P  R  S  M  Y  G  Q  T  L  K  R  *  P  V  K  S  F  L  A  Q  H  L  G  V  A  M  K  K  E  E  *  Y  L  N  F  R  R  N  K  L  S  M  *  W  K  *  H  V  Q  F  T  Y  L  D  L   : G  S  Y  L  Q  K  E  T  K  E  C  W  K  L  K  R  K  F  K  Q  Q  L  G  V  S  L  T  R  D  *  G  Q  W  K  E  G  R  L  V  K  M  T  Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  A  K  I  S  E  *  Q  Q  L  K  *  L  K  S  A  S  Y  S  I  L  L  D  K  R  P  L  Q  C  C  S  Y  G  Q  *  F  C  C  A  Y  I  P  S  G  K  Y  V  P  E  R  R  C  C  R  Y  L  E  M  I  N  Q  I  W  K  D  *  V  A  *  K  * :   *  P  *  S  C  M  R  R  *  G  Y  S  P  H  Y  Q  H  L  V  E  R  I  K  K  K  *  N  W  G  N  *  I  Y  Q  L  E  *  Y  S  *  Y  P  Q  S  *  Y  I  M  I  R  K  Y  G  V  K  T  Q  R  N  S  N  Q  K  D  L  V  K  E  C  Q  R  Q  P  K  D  N  S  R  L  S  H  L  E  E  G  R  E  F  A  L  D  K  T  L  Q  *  W  K  Q  K  W  H  *  Q  *  Y  Y  K  G  S  P  S  N  S  L  H  H  I  H  M  L  H  L  Q  *  *  L  F  I  L  S  M  V  L  L  C  L  C  A  N  S  K  M  I  F  Y  T  I  R  V  V  L  S  I  L  I  C  H  M  M  S  E  V  M  L  *  I  *  T  F  N  V  K  L  Q  L  G  Y  H  Y  Q  N  L  L  V  I  S  D  E  L  H  I  A  S  W  W  S  K  S  F  F  F  L  K  L  C  S  I  Y  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63237" stop="63249"/>
                    <exon start="64342" stop="64562"/>
                    <exon start="64645" stop="64889"/>
                    <exon start="64999" stop="65383"/>
                    <exon start="65535" stop="65960"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1287</number_coding_nucleotides>
                  <number_encoded_amino_acids>429</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNYFCKSSFIWLGPYPIVLITKPEHVKEIFTKNYVYLKQTHPNPFTKLLAKGLVSLEEDKWAKHRKIINPTFHVEKLKHMLPAFYVCCSEMISKWEEIVPKGTSTEIDVWPDLEKMTSEVISRTAFGSSYEEGRIVFELQKEQAEHVMEVARSIYIPGSRFLPTKRNKRMLEIEKEIQTTIRRIIDKRLRAMEGGETSKDDLLGILLESNMKEIEQHGSKDFGMTTVEVIEECKLFYFAGQETTSVLLVWTMILLCLHPEWQVRAREEVLQVFGNDKPDLEGLGRLKIVTMILYETLRLFPPLPTFGRTNKEEVKLGELNLPAGVILIVPAILVHYDKEIWGEDAKEFKPERFSEGVSKATKGQFSFIPFGGGPRICIGQNFAMMEAKMALAMILQRFSFELSPSYTHAPFAVVTIHPQYGAPLLMRKL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62447" stop="62742"/>
                    <exon start="63209" stop="63230"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFMRSMEISYNIIITTICVVILLFYTWKVLNWAWFGPKKLENCLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKPINFSDDIAQRLIPFFLNSINKNGICSFMWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="66094" PGL_stop="65668"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66094" e_stop="65668"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="66094" e_stop="65668" e_length="427"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66094" stop="65668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413615" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATGACCAATAAATTTTGATAATGATAACCAAGCTGCAATTTAACGTTAAACGTTTAAATTCAAAGCATGACTTCAGACATCATGTGACAAATTAGTATCGACAATACAACACGAATGGTGTAAAATATCATCTTAGAGTTTGCGCATAAGCAGAGGAGCACCATACTGAGGATGAATAGTCACTACTGCAAATGGAGCATGTGTATATGATGGAGAGAGTTCGAAGGAGAACCTTTGTAGTATCATTGCTAATGCCATTTTTGCTTCCATCATTGCAAAGTTTTGTCCAATGCAAATTCGCGGCCCTCCTCCAAATGGGATAAACGAGAATTGTCCTTTGGTTGCCTTTGACACTCCTTCACTAAATCTTTCTGGTTTGAATTCCTTTGCGTCTTCACCCCATATTTCCTTATCATAATGTACTA</gDNA_template>
            <first_frame> R  *  P  I  N  F  D  N  D  N  Q  A  A  I  *  R  *  T  F  K  F  K  A  *  L  Q  T  S  C  D  K  L  V  S  T  I  Q  H  E  W  C  K  I  S  S  *  S  L  R  I  S  R  G  A  P  Y  *  G  *  I  V  T  T  A  N  G  A  C  V  Y  D  G  E  S  S  K  E  N  L  C  S  I  I  A  N  A  I  F  A  S  I  I  A  K  F  C  P  M  Q  I  R  G  P  P  P  N  G  I  N  E  N  C  P  L  V  A  F  D  T  P  S  L  N  L  S  G  L  N  S  F  A  S  S  P  H  I  S  L  S  *  C  T  </first_frame>
            <second_frame>  D  D  Q  *  I  L  I  M  I  T  K  L  Q  F  N  V  K  R  L  N  S  K  H  D  F  R  H  H  V  T  N  *  Y  R  Q  Y  N  T  N  G  V  K  Y  H  L  R  V  C  A  *  A  E  E  H  H  T  E  D  E  *  S  L  L  Q  M  E  H  V  Y  M  M  E  R  V  R  R  R  T  F  V  V  S  L  L  M  P  F  L  L  P  S  L  Q  S  F  V  Q  C  K  F  A  A  L  L  Q  M  G  *  T  R  I  V  L  W  L  P  L  T  L  L  H  *  I  F  L  V  *  I  P  L  R  L  H  P  I  F  P  Y  H  N  V  L </second_frame>
            <third_frame>   M  T  N  K  F  *  *  *  *  P  S  C  N  L  T  L  N  V  *  I  Q  S  M  T  S  D  I  M  *  Q  I  S  I  D  N  T  T  R  M  V  *  N  I  I  L  E  F  A  H  K  Q  R  S  T  I  L  R  M  N  S  H  Y  C  K  W  S  M  C  I  *  W  R  E  F  E  G  E  P  L  *  Y  H  C  *  C  H  F  C  F  H  H  C  K  V  L  S  N  A  N  S  R  P  S  S  K  W  D  K  R  E  L  S  F  G  C  L  *  H  S  F  T  K  S  F  W  F  E  F  L  C  V  F  T  P  Y  F  L  I  I  M  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65917" stop="65675"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVTTANGACVYDGESSKENLCSIIANAIFASIIAKFCPMQIRGPPPNGINENCPLVAFDTPSLNLSGLNSFASSPHISLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="67718" PGL_stop="69792"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67718" e_stop="68062"/>
            <exon e_start="68504" e_stop="68724"/>
            <exon e_start="69261" e_stop="69505"/>
            <exon e_start="69650" e_stop="69792"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="0.928"/>
          <exon-intron don_prob="0.998" acc_prob="0.841" e_score="0.964"/>
          <exon-intron don_prob="0.974" acc_prob="1.000" e_score="0.955"/>
          <exon-only e_score="0.895"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="67718" e_stop="68062" e_length="345"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68063" i_stop="68503" i_length="441"/>
          </intron>
          <exon e_serial="2" e_score="0.964">
            <gDNA_exon_boundary e_start="68504" e_stop="68724" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.841">
            <gDNA_intron_boundary i_start="68725" i_stop="69260" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="0.955">
            <gDNA_exon_boundary e_start="69261" e_stop="69505" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.974" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69506" i_stop="69649" i_length="144"/>
          </intron>
          <exon e_serial="4" e_score="0.895">
            <gDNA_exon_boundary e_start="69650" e_stop="69792" e_length="143"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67718" stop="68062"/>
              <exon start="68504" stop="68724"/>
              <exon start="69261" stop="69496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67775" stop="68062"/>
              <exon start="68504" stop="68625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68561" stop="68724"/>
              <exon start="69261" stop="69505"/>
              <exon start="69650" stop="69792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470894" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTGACTTGTGATAATTTTTGTATAGCAAGTAAGATGAAGAGCTGAGAGAAGCTTTGTGACTTTGTGAAAATGGAGATGTTGAGCAAAATAATAGCAACAATATGTGTTGCAATTTTATTAATTTGTACATGGAAAGTGTTGAATTGGGCATGGTTTAGACCAAAGAAATTGGAGAAATACTTTATACAAAATGGTCTAAAAGGAAAACCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAATCTAAGCCTATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCCTTTTTCCTTGACTCCATCAACAAAAATG : GTAAAAGTTCTTTTATGTGGCTAGGCCCATATCCAGTTATATTGATCACAGATCCTGAACATGTAAAGGAGATTTTCACTAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCAATGACCAAGTTATTGGCTCAGGGTCTAGCAAACATCGAGGGAGACAAATGGGCCAAACATAGAAAAATCATCAATCCCGTCTTCCACGTCGAGAAGTTAAAG : CATATGCTGCCGGCATTTTATATGAGTTGTAGTGAAATGCTAAGCAAATGGGAGGAAATTGTTCCAACGGGAACATCATTCGAACTCGATGTTTGGCCAGACCTTCAAATAATGACTAGTGAAGTCATATCTCGTACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAACGGTATTCGAACTTCAGAAAGAACAAGCTGAGTATGTAATCGAAAAAGGACAATCAATTTATATACCAGGATCAAG : GTTCTTGCCTACTAAAAGGAACAAAAGAATGCTGGAAATCGAAAAGGAAATTCAAACCACAATTAGGTGTATCATTGACAAAAGATTGAGGGCAATGGAAGCAGGGGACACCAGTAAAGATGACCTATTGGGCATATTACTCG</gDNA_template>
            <first_frame> I  *  L  V  I  I  F  V  *  Q  V  R  *  R  A  E  R  S  F  V  T  L  *  K  W  R  C  *  A  K  *  *  Q  Q  Y  V  L  Q  F  Y  *  F  V  H  G  K  C  *  I  G  H  G  L  D  Q  R  N  W  R  N  T  L  Y  K  M  V  *  K  E  N  H  I  S  Y  S  M  E  I  *  M  N  S  Q  K  V  *  L  K  L  N  L  S  L  S  I  S  L  M  I  *  L  K  D  S  S  P  F  S  L  T  P  S  T  K  M  :  V  K  V  L  L  C  G  *  A  H  I  Q  L  Y  *  S  Q  I  L  N  M  *  R  R  F  S  L  R  I  M  C  I  *  S  K  L  I  P  I  Q  *  P  S  Y  W  L  R  V  *  Q  T  S  R  E  T  N  G  P  N  I  E  K  S  S  I  P  S  S  T  S  R  S  *  S :   I  C  C  R  H  F  I  *  V  V  V  K  C  *  A  N  G  R  K  L  F  Q  R  E  H  H  S  N  S  M  F  G  Q  T  F  K  *  *  L  V  K  S  Y  L  V  Q  H  L  G  V  A  M  K  K  E  E  R  Y  S  N  F  R  K  N  K  L  S  M  *  S  K  K  D  N  Q  F  I  Y  Q  D  Q   : G  S  C  L  L  K  G  T  K  E  C  W  K  S  K  R  K  F  K  P  Q  L  G  V  S  L  T  K  D  *  G  Q  W  K  Q  G  T  P  V  K  M  T  Y  W  A  Y  Y  S </first_frame>
            <second_frame>  F  D  L  *  *  F  L  Y  S  K  *  D  E  E  L  R  E  A  L  *  L  C  E  N  G  D  V  E  Q  N  N  S  N  N  M  C  C  N  F  I  N  L  Y  M  E  S  V  E  L  G  M  V  *  T  K  E  I  G  E  I  L  Y  T  K  W  S  K  R  K  T  I  *  V  T  L  W  R  F  E  *  T  H  K  K  Y  S  *  S  *  I  *  A  Y  Q  F  L  *  *  Y  S  S  K  T  H  P  L  F  P  *  L  H  Q  Q  K  W :   *  K  F  F  Y  V  A  R  P  I  S  S  Y  I  D  H  R  S  *  T  C  K  G  D  F  H  *  E  L  C  V  S  K  A  N  S  S  Q  S  N  D  Q  V  I  G  S  G  S  S  K  H  R  G  R  Q  M  G  Q  T  *  K  N  H  Q  S  R  L  P  R  R  E  V  K   : A  Y  A  A  G  I  L  Y  E  L  *  *  N  A  K  Q  M  G  G  N  C  S  N  G  N  I  I  R  T  R  C  L  A  R  P  S  N  N  D  *  *  S  H  I  S  Y  S  I  W  E  *  L  *  R  R  K  N  G  I  R  T  S  E  R  T  S  *  V  C  N  R  K  R  T  I  N  L  Y  T  R  I  K  :  V  L  A  Y  *  K  E  Q  K  N  A  G  N  R  K  G  N  S  N  H  N  *  V  Y  H  *  Q  K  I  E  G  N  G  S  R  G  H  Q  *  R  *  P  I  G  H  I  T   </second_frame>
            <third_frame>   L  T  C  D  N  F  C  I  A  S  K  M  K  S  *  E  K  L  C  D  F  V  K  M  E  M  L  S  K  I  I  A  T  I  C  V  A  I  L  L  I  C  T  W  K  V  L  N  W  A  W  F  R  P  K  K  L  E  K  Y  F  I  Q  N  G  L  K  G  K  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  D  S  I  N  K  N   : G  K  S  S  F  M  W  L  G  P  Y  P  V  I  L  I  T  D  P  E  H  V  K  E  I  F  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  M  T  K  L  L  A  Q  G  L  A  N  I  E  G  D  K  W  A  K  H  R  K  I  I  N  P  V  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  M  S  C  S  E  M  L  S  K  W  E  E  I  V  P  T  G  T  S  F  E  L  D  V  W  P  D  L  Q  I  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  T  V  F  E  L  Q  K  E  Q  A  E  Y  V  I  E  K  G  Q  S  I  Y  I  P  G  S  R :   F  L  P  T  K  R  N  K  R  M  L  E  I  E  K  E  I  Q  T  T  I  R  C  I  I  D  K  R  L  R  A  M  E  A  G  D  T  S  K  D  D  L  L  G  I  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67765" stop="68062"/>
                    <exon start="68504" stop="68724"/>
                    <exon start="69261" stop="69505"/>
                    <exon start="69650" stop="69791"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>906</number_coding_nucleotides>
                  <number_encoded_amino_acids>302</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKLCDFVKMEMLSKIIATICVAILLICTWKVLNWAWFRPKKLEKYFIQNGLKGKPYKLLYGDLNELTKSIVEAKSKPINFSDDIAQRLIPFFLDSINKNGKSSFMWLGPYPVILITDPEHVKEIFTKNYVYLKQTHPNPMTKLLAQGLANIEGDKWAKHRKIINPVFHVEKLKHMLPAFYMSCSEMLSKWEEIVPTGTSFELDVWPDLQIMTSEVISRTAFGSSYEEGRTVFELQKEQAEYVIEKGQSIYIPGSRFLPTKRNKRMLEIEKEIQTTIRCIIDKRLRAMEAGDTSKDDLLGILL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="84360" PGL_stop="85008"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84360" e_stop="85008"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="84360" e_stop="85008" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84360" stop="85008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84361" stop="84745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTATAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</gDNA_template>
            <first_frame> Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  *  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  F  *  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  R  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  *  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  V  S  T  W  R  V  G  G  R  D  I  H  D  </first_frame>
            <second_frame>  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  S  D  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  G  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T </second_frame>
            <third_frame>   R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  A  I  *  R  N  L  K  R  R  I  K  S  H  R  L  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  I  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  R  F  Y  M  E  S  W  R  K  R  Y  T  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84361" stop="85008"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="85019" PGL_stop="85826"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85019" e_stop="85826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="85019" e_stop="85826" e_length="808"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85019" stop="85826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343338" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  I  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  W  R  G  L  A  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  M  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  G  E  V  W  H  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  F  G  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  Y  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85021" stop="85824"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="88176" PGL_stop="89577"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88176" e_stop="88497"/>
            <exon e_start="88983" e_stop="89203"/>
            <exon e_start="89298" e_stop="89577"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.994"/>
          <exon-intron don_prob="0.996" acc_prob="0.823" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="88176" e_stop="88497" e_length="322"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="88498" i_stop="88982" i_length="485"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88983" e_stop="89203" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.823">
            <gDNA_intron_boundary i_start="89204" i_stop="89297" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="89298" e_stop="89577" e_length="280"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88176" stop="88497"/>
              <exon start="88983" stop="89203"/>
              <exon start="89298" stop="89577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88228" stop="88497"/>
              <exon start="88983" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442427" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTACTTTAGAGAAGCCTTTTTATTAACTTCATATGGAGTACTTATCACTTGTGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATG : GTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATCCCGCCTTCCATTTTGAGAAACTAAAG : CATATGGTTCCAGCATTTTATCAGAGTTGTAGCGAAATGCTAAGGAAATGGGAGGAGGCTGTTCCAAAGGAAACATCAGCCGAGCTCGATGTATGGCCACATTTTCAACTAATGACCGGTGATGTCATTTCTCGAACTGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAATATTTGAACTTCAAAAAGAACAAGCTGAGTATGTAATGGAACAAATTTTTTCGATTTATATACCAGGGTCGAGGTACGTACAATATTAAACTATTTGATCAAATTTCT</gDNA_template>
            <first_frame> S  T  L  E  K  P  F  Y  *  L  H  M  E  Y  L  S  L  V  E  V  E  M  I  A  T  I  C  V  A  I  L  L  V  I  Y  T  W  K  V  L  N  W  A  W  F  R  P  K  K  F  E  K  Y  L  R  K  S  G  L  N  G  N  P  Y  K  L  L  Y  G  D  L  K  E  L  T  N  K  L  N  E  A  K  S  K  P  I  S  F  S  G  D  V  P  Q  R  L  I  P  F  F  C  D  S  I  N  K  N   : G  K  N  S  F  A  W  L  G  P  K  P  I  V  F  I  T  E  P  S  L  I  K  K  I  F  E  K  H  Y  V  Y  H  K  N  K  H  S  N  P  F  A  K  L  L  V  Q  G  L  V  T  L  E  E  Q  K  W  A  K  H  R  K  I  I  N  P  A  F  H  F  E  K  L  K  :  H  M  V  P  A  F  Y  Q  S  C  S  E  M  L  R  K  W  E  E  A  V  P  K  E  T  S  A  E  L  D  V  W  P  H  F  Q  L  M  T  G  D  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  I  F  E  L  Q  K  E  Q  A  E  Y  V  M  E  Q  I  F  S  I  Y  I  P  G  S  R  Y  V  Q  Y  *  T  I  *  S  N  F  </first_frame>
            <second_frame>  V  L  *  R  S  L  F  I  N  F  I  W  S  T  Y  H  L  W  K  *  R  *  *  Q  Q  F  V  L  Q  F  C  *  *  Y  T  H  G  K  C  *  I  G  H  G  L  G  Q  R  N  L  R  N  T  *  E  K  V  V  L  M  E  I  H  T  N  Y  S  M  E  I  *  R  N  S  Q  I  N  S  M  K  P  S  L  S  P  S  V  S  L  V  M  Y  L  K  G  S  S  L  F  S  V  T  P  S  T  K  M  :  V  K  I  L  L  P  G  *  V  P  S  L  *  Y  S  S  Q  N  L  H  L  *  R  K  F  L  K  N  I  M  Y  I  T  R  I  S  I  L  I  H  S  R  S  Y  W  F  K  V  S  L  P  L  R  N  R  N  G  L  S  I  E  K  S  S  I  P  P  S  I  L  R  N  *  S :   I  W  F  Q  H  F  I  R  V  V  A  K  C  *  G  N  G  R  R  L  F  Q  R  K  H  Q  P  S  S  M  Y  G  H  I  F  N  *  *  P  V  M  S  F  L  E  L  H  L  G  V  A  M  K  K  G  E  *  Y  L  N  F  K  K  N  K  L  S  M  *  W  N  K  F  F  R  F  I  Y  Q  G  R  G  T  Y  N  I  K  L  F  D  Q  I  S </second_frame>
            <third_frame>   Y  F  R  E  A  F  L  L  T  S  Y  G  V  L  I  T  C  G  S  R  D  D  S  N  N  L  C  C  N  F  V  S  N  I  H  M  E  S  V  E  L  G  M  V  *  A  K  E  I  *  E  I  L  K  K  K  W  S  *  W  K  S  I  Q  I  T  L  W  R  F  E  G  T  H  K  *  T  Q  *  S  Q  V  *  A  H  Q  F  L  W  *  C  T  S  K  A  H  P  F  F  L  *  L  H  Q  Q  K  W :   *  K  F  F  C  L  A  R  S  Q  A  Y  S  I  H  H  R  T  F  T  Y  K  E  N  F  *  K  T  L  C  I  S  Q  E  *  A  F  *  S  I  R  E  V  I  G  S  R  S  R  Y  P  *  G  T  E  M  G  *  A  *  K  N  H  Q  S  R  L  P  F  *  E  T  K   : A  Y  G  S  S  I  L  S  E  L  *  R  N  A  K  E  M  G  G  G  C  S  K  G  N  I  S  R  A  R  C  M  A  T  F  S  T  N  D  R  *  C  H  F  S  N  C  I  W  E  *  L  *  R  R  E  N  N  I  *  T  S  K  R  T  S  *  V  C  N  G  T  N  F  F  D  L  Y  T  R  V  E  V  R  T  I  L  N  Y  L  I  K  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88203" stop="88497"/>
                    <exon start="88983" stop="89203"/>
                    <exon start="89298" stop="89558"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHMEYLSLVEVEMIATICVAILLVIYTWKVLNWAWFRPKKFEKYLRKSGLNGNPYKLLYGDLKELTNKLNEAKSKPISFSGDVPQRLIPFFCDSINKNGKNSFAWLGPKPIVFITEPSLIKKIFEKHYVYHKNKHSNPFAKLLVQGLVTLEEQKWAKHRKIINPAFHFEKLKHMVPAFYQSCSEMLRKWEEAVPKETSAELDVWPHFQLMTGDVISRTAFGSSYEEGRIIFELQKEQAEYVMEQIFSIYIPGSRYVQY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="89841" PGL_stop="91271"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89841" e_stop="90016"/>
            <exon e_start="90096" e_stop="90534"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="0.932"/>
          <exon-only e_score="0.895"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="89841" e_stop="90016" e_length="176"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="0.895">
            <gDNA_exon_boundary e_start="90096" e_stop="90534" e_length="439"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89841" stop="90016"/>
              <exon start="90096" stop="90534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89841" stop="90016"/>
              <exon start="90096" stop="90455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402461" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGACGAGTGCAAGTTATTCTATTTTGCCGGGCAAGATACCACTTCAGTGTTGCTCGTATGGACGATGATATTACTGTGCCAACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTATTGAATGTATTCGGAAATGAAAAACCAGATTTTGAAGGACTAAGTCGCCTCAAAATT : GTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACATGCTCCAGTTGCAGTAGTGTCTATTCATCCTCAGTATGGTGCTCCTCTGCATATGCGCAAACTTTAAGACTATTTACGGT</gDNA_template>
            <first_frame> S  T  S  A  S  Y  S  I  L  P  G  K  I  P  L  Q  C  C  S  Y  G  R  *  Y  Y  C  A  N  I  Q  S  G  K  Y  V  P  E  R  R  Y  *  M  Y  S  E  M  K  N  Q  I  L  K  D  *  V  A  S  K  L :   *  L  *  S  C  T  R  R  *  G  C  S  P  P  H  C  Y  M  V  E  Q  T  K  M  K  S  N  W  V  S  *  V  C  Q  L  K  Y  Y  S  L  Y  P  Q  S  *  Y  I  I  T  R  N  Y  G  V  K  T  R  R  N  S  N  Q  I  D  S  V  K  E  C  Q  R  Q  Q  T  D  K  S  R  L  F  H  L  V  G  D  P  E  F  A  S  D  K  T  L  *  *  R  K  Q  R  *  Q  *  Q  *  S  Y  R  S  S  R  L  N  S  L  H  H  I  H  M  L  Q  L  Q  *  C  L  F  I  L  S  M  V  L  L  C  I  C  A  N  F  K  T  I  Y  G </first_frame>
            <second_frame>  R  R  V  Q  V  I  L  F  C  R  A  R  Y  H  F  S  V  A  R  M  D  D  D  I  T  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  I  E  C  I  R  K  *  K  T  R  F  *  R  T  K  S  P  Q  N   : C  D  Y  D  L  V  R  D  V  K  A  V  P  P  R  T  V  I  W  *  N  K  Q  R  *  S  Q  I  G  *  A  E  S  A  S  *  S  T  T  H  Y  T  R  N  P  S  T  L  *  Q  G  I  M  G  *  R  R  E  G  I  Q  T  R  S  I  Q  *  R  S  V  K  G  N  K  R  T  S  L  V  Y  S  I  W  L  G  T  P  N  L  H  R  T  K  L  C  N  D  G  S  K  D  D  N  S  N  D  P  T  E  V  L  V  *  T  L  S  I  I  Y  T  C  S  S  C  S  S  V  Y  S  S  S  V  W  C  S  S  A  Y  A  Q  T  L  R  L  F  T   </second_frame>
            <third_frame>   D  E  C  K  L  F  Y  F  A  G  Q  D  T  T  S  V  L  L  V  W  T  M  I  L  L  C  Q  H  P  E  W  Q  V  R  A  R  E  E  V  L  N  V  F  G  N  E  K  P  D  F  E  G  L  S  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  A  L  L  Y  G  R  T  N  K  D  E  V  K  L  G  E  L  S  L  P  A  E  V  L  L  I  I  P  A  I  L  V  H  Y  N  K  E  L  W  G  E  D  A  K  E  F  K  P  D  R  F  S  E  G  V  S  K  A  T  N  G  Q  V  S  F  I  P  F  G  W  G  P  R  I  C  I  G  Q  N  F  V  M  T  E  A  K  M  T  I  A  M  I  L  Q  K  F  S  F  E  L  S  P  S  Y  T  H  A  P  V  A  V  V  S  I  H  P  Q  Y  G  A  P  L  H  M  R  K  L  *  D  Y  L  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89843" stop="90016"/>
                    <exon start="90096" stop="90521"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DECKLFYFAGQDTTSVLLVWTMILLCQHPEWQVRAREEVLNVFGNEKPDFEGLSRLKIVTMILYETLRLFPPALLYGRTNKDEVKLGELSLPAEVLLIIPAILVHYNKELWGEDAKEFKPDRFSEGVSKATNGQVSFIPFGWGPRICIGQNFVMTEAKMTIAMILQKFSFELSPSYTHAPVAVVSIHPQYGAPLHMRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="89841" e_stop="90016"/>
            <exon e_start="90096" e_stop="90455"/>
            <exon e_start="91262" e_stop="91271"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="0.932"/>
          <exon-intron don_prob="0.925" acc_prob="0.601" e_score="0.989"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="89841" e_stop="90016" e_length="176"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="90096" e_stop="90455" e_length="360"/>
          </exon>
          <intron i_serial="2" don_prob="0.925" acc_prob="0.601">
            <gDNA_intron_boundary i_start="90456" i_stop="91261" i_length="806"/>
          </intron>
          <exon e_serial="3" e_score="0.600">
            <gDNA_exon_boundary e_start="91262" e_stop="91271" e_length="10"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89841" stop="90016"/>
              <exon start="90096" stop="90455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90000" stop="90016"/>
              <exon start="90096" stop="90455"/>
              <exon start="91262" stop="91271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGACGAGTGCAAGTTATTCTATTTTGCCGGGCAAGATACCACTTCAGTGTTGCTCGTATGGACGATGATATTACTGTGCCAACATCCAGAGTGGCAAGTACGTGCCAGAGAGGAGGTATTGAATGTATTCGGAAATGAAAAACCAGATTTTGAAGGACTAAGTCGCCTCAAAATT : GTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACAT : GAAGGGAAAA</gDNA_template>
            <first_frame> S  T  S  A  S  Y  S  I  L  P  G  K  I  P  L  Q  C  C  S  Y  G  R  *  Y  Y  C  A  N  I  Q  S  G  K  Y  V  P  E  R  R  Y  *  M  Y  S  E  M  K  N  Q  I  L  K  D  *  V  A  S  K  L :   *  L  *  S  C  T  R  R  *  G  C  S  P  P  H  C  Y  M  V  E  Q  T  K  M  K  S  N  W  V  S  *  V  C  Q  L  K  Y  Y  S  L  Y  P  Q  S  *  Y  I  I  T  R  N  Y  G  V  K  T  R  R  N  S  N  Q  I  D  S  V  K  E  C  Q  R  Q  Q  T  D  K  S  R  L  F  H  L  V  G  D  P  E  F  A  S  D  K  T  L  *  *  R  K  Q  R  *  Q  *  Q  *  S  Y  R  S  S  R  L  N  S  L  H  H  I  H  M :   K  G  K </first_frame>
            <second_frame>  R  R  V  Q  V  I  L  F  C  R  A  R  Y  H  F  S  V  A  R  M  D  D  D  I  T  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  I  E  C  I  R  K  *  K  T  R  F  *  R  T  K  S  P  Q  N   : C  D  Y  D  L  V  R  D  V  K  A  V  P  P  R  T  V  I  W  *  N  K  Q  R  *  S  Q  I  G  *  A  E  S  A  S  *  S  T  T  H  Y  T  R  N  P  S  T  L  *  Q  G  I  M  G  *  R  R  E  G  I  Q  T  R  S  I  Q  *  R  S  V  K  G  N  K  R  T  S  L  V  Y  S  I  W  L  G  T  P  N  L  H  R  T  K  L  C  N  D  G  S  K  D  D  N  S  N  D  P  T  E  V  L  V  *  T  L  S  I  I  Y  T   : *  R  E   </second_frame>
            <third_frame>   D  E  C  K  L  F  Y  F  A  G  Q  D  T  T  S  V  L  L  V  W  T  M  I  L  L  C  Q  H  P  E  W  Q  V  R  A  R  E  E  V  L  N  V  F  G  N  E  K  P  D  F  E  G  L  S  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  A  L  L  Y  G  R  T  N  K  D  E  V  K  L  G  E  L  S  L  P  A  E  V  L  L  I  I  P  A  I  L  V  H  Y  N  K  E  L  W  G  E  D  A  K  E  F  K  P  D  R  F  S  E  G  V  S  K  A  T  N  G  Q  V  S  F  I  P  F  G  W  G  P  R  I  C  I  G  Q  N  F  V  M  T  E  A  K  M  T  I  A  M  I  L  Q  K  F  S  F  E  L  S  P  S  Y  T  H  :  E  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89843" stop="90016"/>
                    <exon start="90096" stop="90455"/>
                    <exon start="91262" stop="91270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DECKLFYFAGQDTTSVLLVWTMILLCQHPEWQVRAREEVLNVFGNEKPDFEGLSRLKIVTMILYETLRLFPPALLYGRTNKDEVKLGELSLPAEVLLIIPAILVHYNKELWGEDAKEFKPDRFSEGVSKATNGQVSFIPFGWGPRICIGQNFVMTEAKMTIAMILQKFSFELSPSYTHEGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="90739" e_stop="91163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="90739" e_stop="91163" e_length="425"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90739" stop="91163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E380017" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGCCAAACAACGAGCAACAACAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTAAAAAATCT</gDNA_template>
            <first_frame> H  Q  D  L  R  G  K  P  F  D  V  K  S  K  K  P  R  D  Q  K  L  H  Y  N  H  Q  E  L  Q  Y  C  S  P  K  L  A  T  K  Q  S  A  K  Q  R  A  T  T  K  *  D  C  T  K  S  R  E  L  K  E  Q  N  H  Q  F  R  S  Y  C  S  R  Q  Q  N  *  S  C  R  P  P  N  P  T  L  S  V  P  N  Q  R  L  R  *  R  *  Y  A  V  Q  K  S  A  Q  S  D  K  K  R  S  G  N  R  N  L  K  L  V  V  M  A  G  F  L  T  A  N  F  S  L  F  S  L  F  W  L  L  K  N  S  L  K  N   </first_frame>
            <second_frame>  T  K  I  Y  V  E  N  P  S  M  *  R  V  K  N  H  G  T  K  S  S  T  I  I  T  K  S  Y  N  I  V  L  Q  N  W  P  Q  N  K  V  P  N  N  E  Q  Q  Q  N  K  I  A  P  N  L  E  N  *  R  S  K  I  T  N  F  A  A  T  V  H  D  S  K  T  E  A  A  D  H  Q  I  Q  L  C  Q  F  L  I  K  D  *  D  E  D  N  M  L  S  K  N  Q  L  N  R  T  R  N  E  A  G  I  A  I  *  S  W  L  L  W  L  D  F  *  L  R  I  S  L  F  F  L  S  F  G  C  *  K  T  L  *  K  I  </second_frame>
            <third_frame>   P  R  F  T  W  K  T  L  R  C  E  E  *  K  T  T  G  P  K  A  P  L  *  S  P  R  V  T  I  L  F  S  K  I  G  H  K  T  K  C  Q  T  T  S  N  N  K  I  R  L  H  Q  I  *  R  I  K  G  A  K  S  P  I  S  Q  L  L  F  T  T  A  K  L  K  L  Q  T  T  K  S  N  S  V  S  S  *  S  K  I  E  M  K  I  I  C  C  P  K  I  S  S  I  G  Q  E  T  K  R  E  S  Q  F  E  V  G  C  Y  G  W  I  F  D  C  E  F  L  S  F  F  S  L  L  A  A  E  K  L  S  K  K  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0166A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="99882" PGL_stop="98784"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99882" e_stop="99575"/>
            <exon e_start="99459" e_stop="99239"/>
            <exon e_start="99143" e_stop="98899"/>
            <exon e_start="98797" e_stop="98784"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.977" e_score="0.916"/>
          <exon-intron don_prob="0.986" acc_prob="0.779" e_score="0.910"/>
          <exon-intron don_prob="0.937" acc_prob="0.998" e_score="0.931"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="99882" e_stop="99575" e_length="308"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.977">
            <gDNA_intron_boundary i_start="99574" i_stop="99460" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="0.910">
            <gDNA_exon_boundary e_start="99459" e_stop="99239" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.779">
            <gDNA_intron_boundary i_start="99238" i_stop="99144" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.931">
            <gDNA_exon_boundary e_start="99143" e_stop="98899" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.937" acc_prob="0.998">
            <gDNA_intron_boundary i_start="98898" i_stop="98798" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98797" e_stop="98784" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99882" stop="99575"/>
              <exon start="99459" stop="99239"/>
              <exon start="99143" stop="98899"/>
              <exon start="98797" stop="98784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99882" stop="99575"/>
              <exon start="99459" stop="99239"/>
              <exon start="99143" stop="99014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463452" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTAGGTAGAAAGAAGAGTCTTATTAACTTCATGGAGATTCCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAACTTGAAAAATACTTAAGAAAGAGTGGTCTCAAGGGAAATCCATACAAATTATTCTATGGCGATTTGAACGAAATCACAAATAAAGTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCATCCCTTTTTTCCTTGATTCCATCAACAAAAATG : GTAAAAGGTCTTTTGTGTGGCTAGGCCCAAATCCAGCAGTGTTGATCACAGATCCTGAACATGTAAAAGAGATTTTCACAAAGAATTATGCGTATCAAAAGATACCTCATCCCAATCCATTTGCAAACTCATTCGCTAAAGGTCTTGCGTTTCTTGAGGAAGACAAATGGACCAAACATCGAAAAATCATCAATCCTGCTTTCCATTTTGAGAAGTTTAAG : CATATGTTGCCAGCGTTTTATCAAAGTTGTAGTGAAATGATAAGCAAATGGAAGGAGATTAATCCAAAGGGAACATCAGTCGAGCTCGATGTATGGCCAGACATTCAATTAATGACAGGTGAAGTCATTTCTCGAACCTCATTTGGGAGTTGCTATGAAGAAGGGAGAAAAGTATTTGAACTTCAGAGAGAACAAGCTGAGTATGTAATGGACATGACTCATTCAGTTTATATACCAGGATCAAG : GTTCTTGCCTACTA</gDNA_template>
            <first_frame> S  R  *  K  E  E  S  Y  *  L  H  G  D  S  L  Q  Q  N  Y  R  S  N  L  C  C  D  F  V  G  I  Y  M  E  S  V  E  L  G  M  V  *  A  K  E  T  *  K  I  L  K  K  E  W  S  Q  G  K  S  I  Q  I  I  L  W  R  F  E  R  N  H  K  *  S  E  *  S  *  I  *  A  H  Q  F  L  *  *  Y  S  S  K  A  H  P  F  F  P  *  F  H  Q  Q  K  W :   *  K  V  F  C  V  A  R  P  K  S  S  S  V  D  H  R  S  *  T  C  K  R  D  F  H  K  E  L  C  V  S  K  D  T  S  S  Q  S  I  C  K  L  I  R  *  R  S  C  V  S  *  G  R  Q  M  D  Q  T  S  K  N  H  Q  S  C  F  P  F  *  E  V  *   : A  Y  V  A  S  V  L  S  K  L  *  *  N  D  K  Q  M  E  G  D  *  S  K  G  N  I  S  R  A  R  C  M  A  R  H  S  I  N  D  R  *  S  H  F  S  N  L  I  W  E  L  L  *  R  R  E  K  S  I  *  T  S  E  R  T  S  *  V  C  N  G  H  D  S  F  S  L  Y  T  R  I  K  :  V  L  A  Y   </first_frame>
            <second_frame>  V  G  R  K  K  S  L  I  N  F  M  E  I  P  Y  N  R  I  I  E  A  I  C  V  V  T  L  L  V  Y  T  W  R  V  L  N  W  A  W  F  R  P  K  K  L  E  K  Y  L  R  K  S  G  L  K  G  N  P  Y  K  L  F  Y  G  D  L  N  E  I  T  N  K  V  N  E  A  R  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  D  S  I  N  K  N   : G  K  R  S  F  V  W  L  G  P  N  P  A  V  L  I  T  D  P  E  H  V  K  E  I  F  T  K  N  Y  A  Y  Q  K  I  P  H  P  N  P  F  A  N  S  F  A  K  G  L  A  F  L  E  E  D  K  W  T  K  H  R  K  I  I  N  P  A  F  H  F  E  K  F  K  :  H  M  L  P  A  F  Y  Q  S  C  S  E  M  I  S  K  W  K  E  I  N  P  K  G  T  S  V  E  L  D  V  W  P  D  I  Q  L  M  T  G  E  V  I  S  R  T  S  F  G  S  C  Y  E  E  G  R  K  V  F  E  L  Q  R  E  Q  A  E  Y  V  M  D  M  T  H  S  V  Y  I  P  G  S  R :   F  L  P  T  </second_frame>
            <third_frame>   *  V  E  R  R  V  L  L  T  S  W  R  F  L  T  T  E  L  *  K  Q  F  V  L  *  L  C  W  Y  I  H  G  E  C  *  I  G  H  G  L  G  Q  R  N  L  K  N  T  *  E  R  V  V  S  R  E  I  H  T  N  Y  S  M  A  I  *  T  K  S  Q  I  K  *  M  K  L  D  L  S  P  S  I  S  L  M  I  *  L  K  G  S  S  L  F  S  L  I  P  S  T  K  M  :  V  K  G  L  L  C  G  *  A  Q  I  Q  Q  C  *  S  Q  I  L  N  M  *  K  R  F  S  Q  R  I  M  R  I  K  R  Y  L  I  P  I  H  L  Q  T  H  S  L  K  V  L  R  F  L  R  K  T  N  G  P  N  I  E  K  S  S  I  L  L  S  I  L  R  S  L  S :   I  C  C  Q  R  F  I  K  V  V  V  K  *  *  A  N  G  R  R  L  I  Q  R  E  H  Q  S  S  S  M  Y  G  Q  T  F  N  *  *  Q  V  K  S  F  L  E  P  H  L  G  V  A  M  K  K  G  E  K  Y  L  N  F  R  E  N  K  L  S  M  *  W  T  *  L  I  Q  F  I  Y  Q  D  Q   : G  S  C  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99881" stop="99575"/>
                    <exon start="99459" stop="99239"/>
                    <exon start="99143" stop="98899"/>
                    <exon start="98797" stop="98785"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGRKKSLINFMEIPYNRIIEAICVVTLLVYTWRVLNWAWFRPKKLEKYLRKSGLKGNPYKLFYGDLNEITNKVNEARSKPINFSDDIAQRLIPFFLDSINKNGKRSFVWLGPNPAVLITDPEHVKEIFTKNYAYQKIPHPNPFANSFAKGLAFLEEDKWTKHRKIINPAFHFEKFKHMLPAFYQSCSEMISKWKEINPKGTSVELDVWPDIQLMTGEVISRTSFGSCYEEGRKVFELQREQAEYVMDMTHSVYIPGSRFLPT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="106566" PGL_stop="107986"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106566" e_stop="106872"/>
            <exon e_start="107156" e_stop="107376"/>
            <exon e_start="107779" e_stop="107986"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.578" e_score="1.000"/>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="106566" e_stop="106872" e_length="307"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.999">
            <gDNA_intron_boundary i_start="106873" i_stop="107155" i_length="283"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107156" e_stop="107376" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.865" acc_prob="0.578">
            <gDNA_intron_boundary i_start="107377" i_stop="107778" i_length="402"/>
          </intron>
          <exon e_serial="3" e_score="0.952">
            <gDNA_exon_boundary e_start="107779" e_stop="107986" e_length="208"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106566" stop="106872"/>
              <exon start="107156" stop="107376"/>
              <exon start="107779" stop="107819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106620" stop="106872"/>
              <exon start="107156" stop="107161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106624" stop="106872"/>
              <exon start="107156" stop="107376"/>
              <exon start="107779" stop="107986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477713" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACAATAAACAGTTTGAAAAATAAAATTTCATGGAGATTTTGTATAACACAATTATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATG : GTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAG : CATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGATAAGCAAATGGGAGGATATTGTTTCAAAGGAAACATCATACGAGCTCGATGTATGGCCAGACCTTCAAATAATGACCAGTGAAGTTATTTCTCGAACCGCATTTGGTAGTAGCTATGAAGAAGGGAGAATAGTGTTTGAACTTCAGCAAGAACAAGCTGAGCATATAA</gDNA_template>
            <first_frame> N  N  K  Q  F  E  K  *  N  F  M  E  I  L  Y  N  T  I  I  A  I  I  C  V  A  I  L  L  V  Y  T  W  R  V  L  N  W  A  W  F  R  P  K  K  L  E  N  F  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  S  I  N  I  S  D  D  I  T  Q  R  L  I  P  F  F  L  D  S  I  N  K  N   : G  K  S  S  F  M  W  L  G  P  Y  P  T  V  L  I  T  N  P  E  H  V  K  E  I  L  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  A  K  L  L  A  Q  G  L  V  L  V  E  E  D  K  W  A  K  H  R  K  I  I  N  P  A  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  M  S  C  S  E  M  I  S  K  W  E  D  I  V  S  K  E  T  S  Y  E  L  D  V  W  P  D  L  Q  I  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  Q  E  Q  A  E  H  I  </first_frame>
            <second_frame>  T  I  N  S  L  K  N  K  I  S  W  R  F  C  I  T  Q  L  *  Q  *  F  V  L  Q  Y  C  W  Y  I  H  G  E  C  *  I  G  H  G  L  G  Q  K  N  W  R  I  S  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  S  Q  K  V  *  L  K  L  S  L  S  Q  S  I  S  L  M  I  *  L  K  G  L  S  L  F  S  L  T  P  S  T  K  M  :  V  K  V  L  S  C  G  *  A  H  I  Q  Q  C  *  S  Q  I  L  N  M  *  K  R  F  *  Q  R  I  M  C  T  *  S  K  L  I  Q  I  H  L  Q  S  Y  W  L  K  V  L  C  W  L  R  K  T  N  G  Q  N  T  E  K  *  S  I  L  L  S  M  L  R  S  *  S :   I  C  C  Q  H  F  I  *  V  V  V  K  *  *  A  N  G  R  I  L  F  Q  R  K  H  H  T  S  S  M  Y  G  Q  T  F  K  *  *  P  V  K  L  F  L  E  P  H  L  V  V  A  M  K  K  G  E  *  C  L  N  F  S  K  N  K  L  S  I  * </second_frame>
            <third_frame>   Q  *  T  V  *  K  I  K  F  H  G  D  F  V  *  H  N  Y  S  N  N  L  C  C  N  I  V  G  I  Y  M  E  S  V  E  L  G  M  V  *  A  K  K  I  G  E  F  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  T  H  K  K  Y  S  *  S  *  V  *  V  N  Q  Y  L  *  *  Y  N  S  K  A  Y  P  F  F  P  *  L  H  Q  Q  K  W :   *  K  F  F  H  V  A  R  P  I  S  N  S  V  D  H  K  S  *  T  C  K  R  D  F  D  K  E  L  C  V  P  K  A  N  S  S  K  S  I  C  K  V  I  G  S  R  S  C  V  G  *  G  R  Q  M  G  K  T  Q  K  N  N  Q  S  C  F  P  C  *  E  V  K   : A  Y  V  A  S  I  L  Y  E  L  *  *  N  D  K  Q  M  G  G  Y  C  F  K  G  N  I  I  R  A  R  C  M  A  R  P  S  N  N  D  Q  *  S  Y  F  S  N  R  I  W  *  *  L  *  R  R  E  N  S  V  *  T  S  A  R  T  S  *  A  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106590" stop="106872"/>
                    <exon start="107156" stop="107376"/>
                    <exon start="107779" stop="107985"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>711</number_coding_nucleotides>
                  <number_encoded_amino_acids>237</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFMEILYNTIIAIICVAILLVYTWRVLNWAWFRPKKLENFLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKSINISDDITQRLIPFFLDSINKNGKSSFMWLGPYPTVLITNPEHVKEILTKNYVYLKQTHPNPFAKLLAQGLVLVEEDKWAKHRKIINPAFHVEKLKHMLPAFYMSCSEMISKWEDIVSKETSYELDVWPDLQIMTSEVISRTAFGSSYEEGRIVFELQQEQAEHI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="108222" PGL_stop="108936"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108222" e_stop="108483"/>
            <exon e_start="108746" e_stop="108936"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.318" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108222" e_stop="108483" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.318" acc_prob="0.990">
            <gDNA_intron_boundary i_start="108484" i_stop="108745" i_length="262"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108746" e_stop="108936" e_length="191"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108222" stop="108483"/>
              <exon start="108746" stop="108936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201118" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAGATTTCGGATTGACAACAACAGAAGTGATTGAAGAATGCAAGTTATTCTATTTTGCTGGACAGGAGACCACTTCAGTGTTGCTCGTGTGGACGATGGTTTTGCTATGCCTACATCCAGAGTGGCAAGTACGGGCCAGAGAGGAGGTTTTACAGGTCTTCGGAAATGAAAAACCAGATTTGGAAGGACTAAGTCACCTCAAAATT : GTGACAATGATCTTATACGAGACATTAAGGCTATTCCCCCCATTACCGGTATTTAGTAGAAGGAACAAAGAAGAAGTCAAATTAGGGGAGCTGCAGCTACCAGCTGAAGTGATACTTATTATACCTGCAATCTTTATTCATTATGACAAGGAAATATGGGGCGAAGATGCGAAGGAATTCAAACCAGAAAG</gDNA_template>
            <first_frame> F  I  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  I  D  N  N  R  S  D  *  R  M  Q  V  I  L  F  C  W  T  G  D  H  F  S  V  A  R  V  D  D  G  F  A  M  P  T  S  R  V  A  S  T  G  Q  R  G  G  F  T  G  L  R  K  *  K  T  R  F  G  R  T  K  S  P  Q  N   : C  D  N  D  L  I  R  D  I  K  A  I  P  P  I  T  G  I  *  *  K  E  Q  R  R  S  Q  I  R  G  A  A  A  T  S  *  S  D  T  Y  Y  T  C  N  L  Y  S  L  *  Q  G  N  M  G  R  R  C  E  G  I  Q  T  R  K </first_frame>
            <second_frame>  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  N  K  D  F  G  L  T  T  T  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  V  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  E  K  P  D  L  E  G  L  S  H  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  V  F  S  R  R  N  K  E  E  V  K  L  G  E  L  Q  L  P  A  E  V  I  L  I  I  P  A  I  F  I  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E   </second_frame>
            <third_frame>   Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  T  K  I  S  D  *  Q  Q  Q  K  *  L  K  N  A  S  Y  S  I  L  L  D  R  R  P  L  Q  C  C  S  C  G  R  W  F  C  Y  A  Y  I  Q  S  G  K  Y  G  P  E  R  R  F  Y  R  S  S  E  M  K  N  Q  I  W  K  D  *  V  T  S  K  L :   *  Q  *  S  Y  T  R  H  *  G  Y  S  P  H  Y  R  Y  L  V  E  G  T  K  K  K  S  N  *  G  S  C  S  Y  Q  L  K  *  Y  L  L  Y  L  Q  S  L  F  I  M  T  R  K  Y  G  A  K  M  R  R  N  S  N  Q  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108223" stop="108483"/>
                    <exon start="108746" stop="108934"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLGILLESNMKEIEQHGNKDFGLTTTEVIEECKLFYFAGQETTSVLLVWTMVLLCLHPEWQVRAREEVLQVFGNEKPDLEGLSHLKIVTMILYETLRLFPPLPVFSRRNKEEVKLGELQLPAEVILIIPAIFIHYDKEIWGEDAKEFKPE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="110028" PGL_stop="111439"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110028" e_stop="110468"/>
            <exon e_start="110750" e_stop="110970"/>
            <exon e_start="111075" e_stop="111319"/>
            <exon e_start="111426" e_stop="111439"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.671" e_score="0.934"/>
          <exon-intron don_prob="0.996" acc_prob="0.855" e_score="0.950"/>
          <exon-intron don_prob="0.955" acc_prob="0.998" e_score="0.939"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="110028" e_stop="110468" e_length="441"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.671">
            <gDNA_intron_boundary i_start="110469" i_stop="110749" i_length="281"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="110750" e_stop="110970" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.855">
            <gDNA_intron_boundary i_start="110971" i_stop="111074" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="0.939">
            <gDNA_exon_boundary e_start="111075" e_stop="111319" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.955" acc_prob="0.998">
            <gDNA_intron_boundary i_start="111320" i_stop="111425" i_length="106"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="111426" e_stop="111439" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110028" stop="110468"/>
              <exon start="110750" stop="110970"/>
              <exon start="111075" stop="111098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110161" stop="110468"/>
              <exon start="110750" stop="110970"/>
              <exon start="111075" stop="111319"/>
              <exon start="111426" stop="111439"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110161" stop="110468"/>
              <exon start="110750" stop="110970"/>
              <exon start="111075" stop="111204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463452" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAACATATGCCATATGTCCCCAATCCAAGAAAGAAATTGGGGAAAATGGAGAGGAGGCGTATCGAACAATGTTATTATAAAGTTACAAAATCAGCTTACTTCCCCTCTTCCTTTTTTTTCTATGTGAAAGAAAGCAGCTAGAAAGAAGAGTCTTATTACTTTCATGGAGATTTCTTACAACAGAATTATAGAAGCAATTTGTGTTGTGACTTTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAAGCCAAAGAAACTTGAAAAATATTTAAGAAAAAGTGGTCTTAAGGGAAATCCATACAAATTACTCTACGGAGATTCGAAGGAACTCACAAATAAACTGAATGAAGCTAGATCTAAGCCCATCAATTTCTCTGATGATATAGCTCAAAGGCTCGTCCCTTTTTTCATCGACTCCATCAACAAAAATG : GTAAAAGTTCTTTTGTGTGGCTAGGCCCATGTCCAATAGTGTTGATCACATATCCTGAACATGTAAAAGAGATTTTCACAAAGAACTGTGCGTATCAAAAGCAAGCTCATCCTAATCCATTTGCCAAGTTATTGGCTATAGGTCTTGCGTTGCTTGAGGAAGACAAATGGGCCAAACACCGAAAAATCATCAATCCTGCTTTCCATGTTGAGAAGTTAAAG : CATATGTTGCCAGCATTTTATCAGAGTTGTACTGAAATGCTAAGCAAATGGGAGGAGATTATTCAAAAGGAAACATCAGTCGAGCTCGATGTATGGCCAGACCTTCAATTAATGACAGGTGAAGTCATTTCCCGAACAGCATTTGGGAGTAGCTATGAGGAAGGGAGAATAGTATTTGAACTTCAGAAAGAACAAGCTGAGTATGTAATTGACATAACTCGTTCAGTTTATATACCAGGATCGAG : GTTCTTGCCTACTA</gDNA_template>
            <first_frame> L  T  Y  A  I  C  P  Q  S  K  K  E  I  G  E  N  G  E  E  A  Y  R  T  M  L  L  *  S  Y  K  I  S  L  L  P  L  F  L  F  F  L  C  E  R  K  Q  L  E  R  R  V  L  L  L  S  W  R  F  L  T  T  E  L  *  K  Q  F  V  L  *  L  C  W  Y  I  H  G  E  C  *  I  G  H  G  L  S  Q  R  N  L  K  N  I  *  E  K  V  V  L  R  E  I  H  T  N  Y  S  T  E  I  R  R  N  S  Q  I  N  *  M  K  L  D  L  S  P  S  I  S  L  M  I  *  L  K  G  S  S  L  F  S  S  T  P  S  T  K  M  :  V  K  V  L  L  C  G  *  A  H  V  Q  *  C  *  S  H  I  L  N  M  *  K  R  F  S  Q  R  T  V  R  I  K  S  K  L  I  L  I  H  L  P  S  Y  W  L  *  V  L  R  C  L  R  K  T  N  G  P  N  T  E  K  S  S  I  L  L  S  M  L  R  S  *  S :   I  C  C  Q  H  F  I  R  V  V  L  K  C  *  A  N  G  R  R  L  F  K  R  K  H  Q  S  S  S  M  Y  G  Q  T  F  N  *  *  Q  V  K  S  F  P  E  Q  H  L  G  V  A  M  R  K  G  E  *  Y  L  N  F  R  K  N  K  L  S  M  *  L  T  *  L  V  Q  F  I  Y  Q  D  R   : G  S  C  L  L </first_frame>
            <second_frame>  *  H  M  P  Y  V  P  N  P  R  K  K  L  G  K  M  E  R  R  R  I  E  Q  C  Y  Y  K  V  T  K  S  A  Y  F  P  S  S  F  F  F  Y  V  K  E  S  S  *  K  E  E  S  Y  Y  F  H  G  D  F  L  Q  Q  N  Y  R  S  N  L  C  C  D  F  V  G  I  Y  M  E  S  V  E  L  G  M  V  *  A  K  E  T  *  K  I  F  K  K  K  W  S  *  G  K  S  I  Q  I  T  L  R  R  F  E  G  T  H  K  *  T  E  *  S  *  I  *  A  H  Q  F  L  *  *  Y  S  S  K  A  R  P  F  F  H  R  L  H  Q  Q  K  W :   *  K  F  F  C  V  A  R  P  M  S  N  S  V  D  H  I  S  *  T  C  K  R  D  F  H  K  E  L  C  V  S  K  A  S  S  S  *  S  I  C  Q  V  I  G  Y  R  S  C  V  A  *  G  R  Q  M  G  Q  T  P  K  N  H  Q  S  C  F  P  C  *  E  V  K   : A  Y  V  A  S  I  L  S  E  L  Y  *  N  A  K  Q  M  G  G  D  Y  S  K  G  N  I  S  R  A  R  C  M  A  R  P  S  I  N  D  R  *  S  H  F  P  N  S  I  W  E  *  L  *  G  R  E  N  S  I  *  T  S  E  R  T  S  *  V  C  N  *  H  N  S  F  S  L  Y  T  R  I  E  :  V  L  A  Y   </second_frame>
            <third_frame>   N  I  C  H  M  S  P  I  Q  E  R  N  W  G  K  W  R  G  G  V  S  N  N  V  I  I  K  L  Q  N  Q  L  T  S  P  L  P  F  F  S  M  *  K  K  A  A  R  K  K  S  L  I  T  F  M  E  I  S  Y  N  R  I  I  E  A  I  C  V  V  T  L  L  V  Y  T  W  R  V  L  N  W  A  W  F  K  P  K  K  L  E  K  Y  L  R  K  S  G  L  K  G  N  P  Y  K  L  L  Y  G  D  S  K  E  L  T  N  K  L  N  E  A  R  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  V  P  F  F  I  D  S  I  N  K  N   : G  K  S  S  F  V  W  L  G  P  C  P  I  V  L  I  T  Y  P  E  H  V  K  E  I  F  T  K  N  C  A  Y  Q  K  Q  A  H  P  N  P  F  A  K  L  L  A  I  G  L  A  L  L  E  E  D  K  W  A  K  H  R  K  I  I  N  P  A  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  Q  S  C  T  E  M  L  S  K  W  E  E  I  I  Q  K  E  T  S  V  E  L  D  V  W  P  D  L  Q  L  M  T  G  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  K  E  Q  A  E  Y  V  I  D  I  T  R  S  V  Y  I  P  G  S  R :   F  L  P  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110156" stop="110468"/>
                    <exon start="110750" stop="110970"/>
                    <exon start="111075" stop="111319"/>
                    <exon start="111426" stop="111438"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKAARKKSLITFMEISYNRIIEAICVVTLLVYTWRVLNWAWFKPKKLEKYLRKSGLKGNPYKLLYGDSKELTNKLNEARSKPINFSDDIAQRLVPFFIDSINKNGKSSFVWLGPCPIVLITYPEHVKEIFTKNCAYQKQAHPNPFAKLLAIGLALLEEDKWAKHRKIINPAFHVEKLKHMLPAFYQSCTEMLSKWEEIIQKETSVELDVWPDLQLMTGEVISRTAFGSSYEEGRIVFELQKEQAEYVIDITRSVYIPGSRFLPT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="114745" PGL_stop="115653"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114745" e_stop="115040"/>
            <exon e_start="115569" e_stop="115653"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.963" e_score="0.889"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.889">
            <gDNA_exon_boundary e_start="114745" e_stop="115040" e_length="296"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.963">
            <gDNA_intron_boundary i_start="115041" i_stop="115568" i_length="528"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="115569" e_stop="115653" e_length="85"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114745" stop="115040"/>
              <exon start="115569" stop="115653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476467" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGCATTTTATTAATTTAATGGAGATTTCTTACAACACAATTCTAACAGCAATTTGTGTTGCAATTTTGTTGGTATATACATGGAAAGTGTTGAACTGGGCATGGTTTAGGCCAAAGAAACTTGAGAAATACTTAAGAAAAAGTGGTCTTAAGGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCAAAAATAAACTCAATGAAGCCAAATCTAAGCCCATCAATTTCTCCGATGGTATAGCTCAAAGAATCAACCCTTTTTTCGCCAACGCTATCGACAAAAACG : GCCCATATCCAATAGTGTTGATCACAGAACCTGAACATGTAAAGGAGATTTTGACAAAGAATTATGTGTACCAAAGGCAAACTCA</gDNA_template>
            <first_frame> E  A  F  Y  *  F  N  G  D  F  L  Q  H  N  S  N  S  N  L  C  C  N  F  V  G  I  Y  M  E  S  V  E  L  G  M  V  *  A  K  E  T  *  E  I  L  K  K  K  W  S  *  G  K  S  I  Q  I  T  L  W  R  F  E  G  T  Q  K  *  T  Q  *  S  Q  I  *  A  H  Q  F  L  R  W  Y  S  S  K  N  Q  P  F  F  R  Q  R  Y  R  Q  K  R :   P  I  S  N  S  V  D  H  R  T  *  T  C  K  G  D  F  D  K  E  L  C  V  P  K  A  N  S </first_frame>
            <second_frame>  K  H  F  I  N  L  M  E  I  S  Y  N  T  I  L  T  A  I  C  V  A  I  L  L  V  Y  T  W  K  V  L  N  W  A  W  F  R  P  K  K  L  E  K  Y  L  R  K  S  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  K  E  L  K  N  K  L  N  E  A  K  S  K  P  I  N  F  S  D  G  I  A  Q  R  I  N  P  F  F  A  N  A  I  D  K  N   : G  P  Y  P  I  V  L  I  T  E  P  E  H  V  K  E  I  L  T  K  N  Y  V  Y  Q  R  Q  T   </second_frame>
            <third_frame>   S  I  L  L  I  *  W  R  F  L  T  T  Q  F  *  Q  Q  F  V  L  Q  F  C  W  Y  I  H  G  K  C  *  T  G  H  G  L  G  Q  R  N  L  R  N  T  *  E  K  V  V  L  R  E  I  H  T  N  Y  S  M  E  I  *  R  N  S  K  I  N  S  M  K  P  N  L  S  P  S  I  S  P  M  V  *  L  K  E  S  T  L  F  S  P  T  L  S  T  K  T  :  A  H  I  Q  *  C  *  S  Q  N  L  N  M  *  R  R  F  *  Q  R  I  M  C  T  K  G  K  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114746" stop="115040"/>
                    <exon start="115569" stop="115651"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHFINLMEISYNTILTAICVAILLVYTWKVLNWAWFRPKKLEKYLRKSGLKGNPYKLLYGDLKELKNKLNEAKSKPINFSDGIAQRINPFFANAIDKNGPYPIVLITEPEHVKEILTKNYVYQRQT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="116493" PGL_stop="117541"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116493" e_stop="116704"/>
            <exon e_start="116993" e_stop="117541"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.806" acc_prob="0.993" e_score="0.887"/>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.887">
            <gDNA_exon_boundary e_start="116493" e_stop="116704" e_length="212"/>
          </exon>
          <intron i_serial="1" don_prob="0.806" acc_prob="0.993">
            <gDNA_intron_boundary i_start="116705" i_stop="116992" i_length="288"/>
          </intron>
          <exon e_serial="2" e_score="0.922">
            <gDNA_exon_boundary e_start="116993" e_stop="117541" e_length="549"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116493" stop="116704"/>
              <exon start="116993" stop="117541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431150" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116613" stop="116704"/>
              <exon start="116993" stop="117494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429144" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGCAATGATTTCGGAATAACAACAGCTGAAATGATAGAAGAATGTAAGTTATTCTATTTTGCTGGGCAAGAGACCACTTCAGTGTTGCTCGCGTGGACAATGATTTTGTTGAGCCTACATCCAGAGTGGCAAGCACGTGCCAGAGAGGAGGTGCTGCAAGTCTTCGGAAATGAAAAACCAAATTCGGAAGGGCTAAGTCGCCTCAAAATT : GTGACAATGATCTTGCATGAGACGTTAAGGCTATTCCCCTCAGTACCAACGTATCGTAGAAGGAACAAACATGAAGTCAAATTAGGGGAGCTGAGTTTACCAGCTGGAGTGCAACTCATTATACCCACAATATTAATTCATTATGACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGAAAGATTCAGTGAGGGAGTGTCAAAGGCAACAAAAGGACAGGTCTCGTTTATTCCATTTGGTGGGGGACCTAGAGTTTGCATCGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCAATAGCAATGATATTACAAAAGTTCTCCTTCGAACTCTCTCCGTCTTATACACATGCTCCAGTTCTAACAATTACTATTCATCCACAGTATGGTGCTCCTCTGCTTATGCGCAAACTTTGAAATGGATGTTGCTCATATTTAATACCAATGGTGTTGTGTTCTCCGTGTTTCAGCTCGAATACTGCTAAACTAGTCGGTTATGGCTGACATAACTCTTTTCCTATTTCAACATTGCAGTTTTGA</gDNA_template>
            <first_frame> E  A  M  I  S  E  *  Q  Q  L  K  *  *  K  N  V  S  Y  S  I  L  L  G  K  R  P  L  Q  C  C  S  R  G  Q  *  F  C  *  A  Y  I  Q  S  G  K  H  V  P  E  R  R  C  C  K  S  S  E  M  K  N  Q  I  R  K  G  *  V  A  S  K  L :   *  Q  *  S  C  M  R  R  *  G  Y  S  P  Q  Y  Q  R  I  V  E  G  T  N  M  K  S  N  *  G  S  *  V  Y  Q  L  E  C  N  S  L  Y  P  Q  Y  *  F  I  M  T  R  N  Y  G  V  K  T  R  R  N  S  N  Q  K  D  S  V  R  E  C  Q  R  Q  Q  K  D  R  S  R  L  F  H  L  V  G  D  L  E  F  A  S  D  K  T  L  Q  *  W  K  Q  K  W  Q  *  Q  *  Y  Y  K  S  S  P  S  N  S  L  R  L  I  H  M  L  Q  F  *  Q  L  L  F  I  H  S  M  V  L  L  C  L  C  A  N  F  E  M  D  V  A  H  I  *  Y  Q  W  C  C  V  L  R  V  S  A  R  I  L  L  N  *  S  V  M  A  D  I  T  L  F  L  F  Q  H  C  S  F   </first_frame>
            <second_frame>  K  Q  *  F  R  N  N  N  S  *  N  D  R  R  M  *  V  I  L  F  C  W  A  R  D  H  F  S  V  A  R  V  D  N  D  F  V  E  P  T  S  R  V  A  S  T  C  Q  R  G  G  A  A  S  L  R  K  *  K  T  K  F  G  R  A  K  S  P  Q  N   : C  D  N  D  L  A  *  D  V  K  A  I  P  L  S  T  N  V  S  *  K  E  Q  T  *  S  Q  I  R  G  A  E  F  T  S  W  S  A  T  H  Y  T  H  N  I  N  S  L  *  Q  G  I  M  G  *  R  R  E  G  I  Q  T  R  K  I  Q  *  G  S  V  K  G  N  K  R  T  G  L  V  Y  S  I  W  W  G  T  *  S  L  H  R  T  K  L  C  N  D  G  S  K  N  G  N  S  N  D  I  T  K  V  L  L  R  T  L  S  V  L  Y  T  C  S  S  S  N  N  Y  Y  S  S  T  V  W  C  S  S  A  Y  A  Q  T  L  K  W  M  L  L  I  F  N  T  N  G  V  V  F  S  V  F  Q  L  E  Y  C  *  T  S  R  L  W  L  T  *  L  F  S  Y  F  N  I  A  V  L  </second_frame>
            <third_frame>   S  N  D  F  G  I  T  T  A  E  M  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  A  W  T  M  I  L  L  S  L  H  P  E  W  Q  A  R  A  R  E  E  V  L  Q  V  F  G  N  E  K  P  N  S  E  G  L  S  R  L  K  I  :  V  T  M  I  L  H  E  T  L  R  L  F  P  S  V  P  T  Y  R  R  R  N  K  H  E  V  K  L  G  E  L  S  L  P  A  G  V  Q  L  I  I  P  T  I  L  I  H  Y  D  K  E  L  W  G  E  D  A  K  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  V  S  F  I  P  F  G  G  G  P  R  V  C  I  G  Q  N  F  A  M  M  E  A  K  M  A  I  A  M  I  L  Q  K  F  S  F  E  L  S  P  S  Y  T  H  A  P  V  L  T  I  T  I  H  P  Q  Y  G  A  P  L  L  M  R  K  L  *  N  G  C  C  S  Y  L  I  P  M  V  L  C  S  P  C  F  S  S  N  T  A  K  L  V  G  Y  G  *  H  N  S  F  P  I  S  T  L  Q  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116495" stop="116704"/>
                    <exon start="116993" stop="117418"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNDFGITTAEMIEECKLFYFAGQETTSVLLAWTMILLSLHPEWQARAREEVLQVFGNEKPNSEGLSRLKIVTMILHETLRLFPSVPTYRRRNKHEVKLGELSLPAGVQLIIPTILIHYDKELWGEDAKEFKPERFSEGVSKATKGQVSFIPFGGGPRVCIGQNFAMMEAKMAIAMILQKFSFELSPSYTHAPVLTITIHPQYGAPLLMRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 287 chains have been computed
$ 
$ memory statistics:
$ 620432 bytes spliced alignments in total
$ 70 spliced alignments have been stored
$ 8863 bytes was the average size of a spliced alignment
$ 29224 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1538 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 343 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-17 02:42:04
-->
