<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-17 02:42:11"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346850" ref_strand="+" ref_description="SGN-U346850        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 2e-30, score=135)">
      <seq>cgaaaatggaggcttgtagacgatttcttcttcatcatcctcctcagtcacttcacggtcggggccactgttatctgctcccagatcatgggcgaggtattttccgccctttgggtcgctatgggtcgccaattcctcgtcgagcgccgcgtttctgtccaacaacacagcagtctcgatatctatcttcgcctctctcgcctttccttcgtgtatctctaaacgaagcaagttcaaccttttccttaggctttcggtttccatctcaacctccttctttctctttatctgtgacgccagatcttcatccaatgttgtgaccgcagctttgtagatcgccgtggtcgcgtctactttgagtccttcttccttaaccttctgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="16629" stop="15644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16329" g_stop="15944" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-U346850" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16329" e_stop="15944"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGCCAGGGCCACTGTTATCTGCTCCCCGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGTGCTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTTAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCCTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAAATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</genome_strand>
        <mrna_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGTCGGGGCCACTGTTATCTGCTCCCAGATCATGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGCGTTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCTAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345356" ref_strand="+" ref_description="SGN-U345356        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|53689767|gb|AAU89777.1| gag-pol polyprotein-like [Solanum tuberosum] (evalue: 7e-22, score=105)">
      <seq>aggctggttctgagttggatctatgtttgatgaagggaagtagaccggaggtcttgcatcagcaatattagtaccaaatccaggtggaggcgcatcctgtctccgttgcatttcaactttcatttcagcaatctgttgcatcagttgcatgatcaattcattctgttccactacagtgggctgagcgaccacaacgtcagtaagacgcccttcgtcattgttgtctcccataactgtttttcctttatctgaatttgatcgagggaaggaatctgtaggacctttcgatctggtgaagtaaggatgatctgccagctttattgacacagatcagtaaaaaggtacctgaaaggtaaaaacaactcaaaggcaaatttgttagtgcatatccagagtacaaaatgcttaatatcgcacataaaaccgataaacacacaagtcgttttgtttgaggatatcttaacccacgaataaggacggatatatattttgaacaaacaggaatttgtttgtttggcgttatcttgggaaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="17467" stop="16332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17167" g_stop="16632" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-U345356" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17167" e_stop="16632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACCACAGTGGGCTGAGCCACCACAACGTCCGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAACTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGCAAAAAGGTACCTGAGAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAGCACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</genome_strand>
        <mrna_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAATATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGTTGCATGATCAATTCATTCTGTTCCACTACAGTGGGCTGAGCGACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTATCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGTAAAAAGGTACCTGAAAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCTTAATATCGCACATAAAACCGATAAACACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGTTATCTTGGGAAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325967" ref_strand="+" ref_description="SGN-U325967        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: RNA-directed(evalue: 1e-85, score=318)">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtatttttcctcatcaagatgagtacaaaggaaagttcgcaccaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="23053" stop="24348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23313" g_stop="24048" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U325967" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23313" e_stop="24048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTATGATTATCCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAGAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTCCAAAGGGAAGTTCGCACCAAACTG</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGATGAGTACAAAGGAAAGTTCGCACCAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325176" ref_strand="+" ref_description="SGN-U325176        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT3G14690.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4937386-4939472 FORWARD | Aliases: MIE1.19 (evalue: 1e-110, score=396) genbank/nr: cytochrome(evalue: 2e-116, score=419)">
      <seq>ttcagtaatatatgcatggaagttgttagattgggcatggtttaggccaagaaaactagaaaaatgcctaagaaaacaaggtctcaaagggaactcttacaaattaatttttggagatctcaaagagttagccaaaagctttgaagatgttaagtccaagccattgaatgtctttgatgatgacataactcctagaattgttccttattttgttgatacaatcaagaaacatggtaaaaattgttttatatggattgggccaaagcctatggtattagtaaatgatgctgatgtaataagagatgtgtttaacaaatatgttctctaccaaaagcctaaaccaactcccctcaccaagttgctagcacaaggacttgcaagctatgaagaggataaatgggcaatgcatagaaaaatcctcaatcctgctttccatatggagaagattaagaatatggttccagcaattcatttgagctgcactgaaatggtgagccaatgggaggagtcaatctcaacgaaaggaacatcttgtgaaatcgatatatggccttaccttcaaaaattgtctagtgatgtgatttctcgaacagcctttggaagcaactatgaagaaggtcgaatgatatttgagcttcaaaaagaacaagctcagcatttcattgaagctactcgtaccttgtatattctaggatcgaggtttttgccaactaagaaaaatcgaaggatgaaggagatcgataaaaacgttcaagcaatgattagaggaataattgataaaagagtgaaggcattgaaagcaggggaggccaatactgatgacttattagggatgttgttggaatccaactttaaacaaattgaacaacatggcaacaaggattttggtatgagtacgcgagagatcatcgaggagtgtaaattgttctattttgctggacaagaaaccacctctgtattgcttgtatggactatgattttgttgagtagacatctagattggcaaactcgcgctagagaaaggttttgcaagtcttcggtgatagcaaactagaatttgatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="48035" stop="42943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47735" g_stop="47503" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47264" g_stop="47047" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="451" r_length="218" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44061" g_stop="43814" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="699" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43813" i_stop="43610" i_length="204">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43609" g_stop="43243" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="700" r_stop="1065" r_length="366" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-U325176" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1066</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47735" e_stop="47503"/>
          <exon e_start="47264" e_stop="47047"/>
          <exon e_start="44061" e_stop="43814"/>
          <exon e_start="43609" e_stop="43243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATGGTAAGCTTTGTTTTTGTTTCTCATCTAATGATGTTCTTTGTACCTGTTTTGAAGTTTGATTAATTCAGATTCTGACTGAACATGAGACTTCATATTCCCAGGGCTCGAATTCAAGAACTCTAATTAAGAAGGGACAATTACATTAAAAGTTTACCTAAGAAATTTGTTATTAGTTTATCGCTAAATAACCCGTAGCTAACATGACATATTGATATAAATCCATTATACAATTTTACAGGTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAGGTATTTCTCAAGATATATTTTTATTAATATTTCCTTCGTTGTAACATATGTGATACACTTTTCTTGATAGTCTGTTCGATTAAGAATATCATCTTTCTATGGTTAGAAAGTATTATAACTTTGAAATATTCCTTTTGCCATTAGTGAAATGAGTTATAGTCGTGCAAGTTTAACATTTGTTTTATACCTAAAATTTCAAGTCTGTCTGTTTTTCTTTCTTAAACTTTCGACCAAGGGGGCTTCACACACTCAGAGGCGGATCTAGGATTTGAAGGTCCTAGGTGTTACATCGTTCAAGTAAGATAAGCGGGTCGGTTGCTTTAATTTTGAGTTACAATCGAGTTATTTATCTTTTTTCGGTCTTTATAAACAAATCGATCAAAACATGCATGTTAGTAATATTTTCTTTTAGATATGCGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTGGAGCTGATATACCCCTTGTTATAAAAGTGGCTCATATATACCCCTACATATAAACAAATGGCTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAAGATAATTTTAATCTAACTTTTTATTATTTTTTTCTACAATATATAATCCTATATAAGTAACTTTAATCCTCGTCAAACATATTTTTTTTGACTTTTTTTTGTTTCAATGACTAATTTAGAATTATTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTTTTGTAGATGGCCAAATTTTTTTCTTTAAATACAAAAATCAAATTACAATATAGACAAAAAATAGTTTAATTTTTTTTCTTTAAACAAAGGAATGAAAGAAAAAATAAAATAAGAATAAGAAACTCAAATAATTCTAATAAAAAAAGTCAAAAAATAATTTATGTAGTAAAAAAAATTAAAATATACATTGAATTTTGATAAAAGAATCATATATACCCCTATGTAATTTTTAAAAAAAATTAAAAGTAATAAATATACACTTAAAACTATTTTTTTTAATTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAATCTTTTGTATAACGGTAAGGTCATATATGAACCACTTTCATAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAGGGGTATATCATACCATTTTCCCTTTTAGATATTATGAGATAGAGCTAAGTAACAGTTCAATTTTTATTTCTTTTTAGGAATTAGTGACCTTATTCGCTGAAACTTTGAGGAAAAAAGAGTTTTTTCACACTAAAATTTGAGCTTGTATAAACTATCTAATATTGTTATTTCAATATATTCATATTTCATTAGCTTTATGTGTTGTTGCAAAATATAAAAAAGAAAATACAAATTTTAGTTTCAATCTAGTCATCTTACTTAGCAAGAATGTTGGTGAAGATCGAAAGATCCTTCAAATTAAAAGAACTCTAATTAAAATATTCATCATTATTAAAATTACTATTTAAATACATTCTTAATAATATTTATGTCACGTTCCTAATTTAATTGATAAAGTATAAACATACGACACTCATATCAAGAGATTAATAATTAGTGAAAGAGAAAGTAAAAAAACATAAAGGGAAAAGGGTCTGATATACCCCTCAACTTTGTCATTTAGAGCTGATATACCCTCGTTATAAAAGTGACTCATATATACCCCTACATATAAACAAATGACTCACATATACCCTTTTCCTCTAACGGAAATGAAAAAAAATAATTTTAATCTAAATTTTTGTTATTTTTTCTAAAAAATATAATCCCATATGAATAAATTTAATCCTCGTCGAACAAATTTTTTTTGACTTTTTTTTTTGTTTTAATGACTAATTTATAATTACTATTTTGATAATCAAATTTATTTATGTTTCACTAATATTCTTGTAAAACTTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCTATTAAATAATTATGATGAATAAGAATTTAAATTAACAAAGAATACTTGTAAATAAATAAGAACGAATGGATCACACATCAATAAAAAAAAAAGACAAAACAAAAGGAAAAAAAAGAAAGAAAAAGCTTCCAAAAATTGATGCGCCAACAAAGGTTCAAACTTGTGCTGCCAATCTTGCAGATTAACTACTTTGCCAATTGAACTGTTAATCATTTTATTTAGTGAGTGACAAAGAAAAAAAATCGTTTTCTTAAACATGTATACACACATATAAAGTTTTTTTCGAGATCAACGGGCACCCATAGATCCGCCCCTACACACACTTATACAATAAGTATGTTGTTTTGTATCCCCTTTGAGAAAATCCTGGCTCCTCCACTGTCGTCTATATGTATGGCTTACATATGAATGTTGAAGATATGTTTCAGTTTTTAACCGTTTATGCTTTTAAATAAGATAGTCGCACATAATTCAATAAAAGAAGTTTGTTTCGTGATCCACTTGTATTGATTATCACAAATTCATGATATGATATAATCAACTCTGCTTTCATTCTGTTTTTGTTTTTCATTTTTTGTTCCTTTCTATGACTTGCACTAATGTGTGGTTTACAAATGTGTAGAATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCGAGGTATTAAAATTAAACCTTGTTTTCCCCCGAGTTTAAGTTATGTACATTAGCACATATAATATCTATAAGGTCATAACACGTTAACTTTTTGAGGATTCCTTCACATAGTGATTGTAAATGACTGATTTTTGCAATCTTTTCGACCTTGGAAAATAGTGAGTATTGATGATGATATACGCGTTGTTGTGTGTTAAACTAATGTAGGTTTTTGCCAACTAAGAAAAATCGAAGGATGAAGGAGATCGATAAAAACGTTCAAGCAATGATTAGAGGAATAATTGATAAAAGAGTGAAGGCATTGAAAGCAGGGGAGGCCAATACTGATGACTTATTAGGGATGTTGTTGGAATCCAACTTTAAACAAATTGAACAACATGGCAACAAGGATTTTGGTATGAGTACGCGAGAGATCATCGAGGAGTGTAAATTGTTCTATTTTGCTGGACAAGAAACCACCTCTGTATTGCTTGTATGGACTATGATTTTGTTGAGTAGACATCTAGATTGGCAAACTCGCGCTAGAGAAGAGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGA</genome_strand>
        <mrna_strand>TTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG..............................................................................................................................................................................................................................................GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGATGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCGAG............................................................................................................................................................................................................GTTTTTGCCAACTAAGAAAAATCGAAGGATGAAGGAGATCGATAAAAACGTTCAAGCAATGATTAGAGGAATAATTGATAAAAGAGTGAAGGCATTGAAAGCAGGGGAGGCCAATACTGATGACTTATTAGGGATGTTGTTGGAATCCAACTTTAAACAAATTGAACAACATGGCAACAAGGATTTTGGTATGAGTACGCGAGAGATCATCGAGGAGTGTAAATTGTTCTATTTTGCTGGACAAGAAACCACCTCTGTATTGCTTGTATGGACTATGATTTTGTTGAGTAGACATCTAGATTGGCAAACTCGCGCTAGAGAA-AGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344226" ref_strand="+" ref_description="SGN-U344226        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 2e-07, score=59.3)">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="45425" stop="44381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45125" g_stop="44684" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-U344226" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U344226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45125" e_stop="44684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACC-TGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATA-ATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCT</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAG--AAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATGAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313688" ref_strand="+" ref_description="SGN-U313688        Tomato 200607 #1 [12 ESTs aligned]">
      <seq>taactcttcattttacttctctcttcttaacatatactttaattttaaatttgtctggtcttctgttgttaagattttcttaatcttgtatgagggttgtcatctttacaactattgggctttgttcactttgtttggtgatattgtcactttgctttcttgactgtttttgcaatcttttactataaagatagtattaatctttaattaagatctcatttcatacatttgtaattgatgctttacattccatttggctttcttattttcttccactaattctcttttctattccaatatgacaaaatgtagtgtttatgctattctggttgacattatcttgctaaatgatctatctatgacatagttttaaaaaaaataacatacttttgttcatattggtgttattatataaaatgtcttatgtcaatcgtgaaataggaattcaaagatgaggcttagttgaagcttaatgttgccacattttttttcattttgtgttgtaaaagttatgtgatgcgattctgtgctaacaggtgattttttatcaaagatgatccagaagatccaagcatgaaagatgcatctgtttttgtctaattctatacagtatgtaaatgtatgtaattagtattcccacatatgaaaatgttaaactatgtaagtatctcacttcgacattcagtagtatgacatgcacacgaaaatatattatgaacaaatttggcagctaaaaaaaaaaaaaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="53192" stop="100413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53495" g_stop="54160" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="737" r_length="664" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54161" i_stop="54820" i_length="660">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54821" g_stop="54865" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="782" r_length="45" r_score="0.644"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U313688" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53495" e_stop="54160"/>
          <exon e_start="54821" e_stop="54865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAG-TTT-AAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACA-TTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAATGTGTTCGAATTACTAATTTTTCTCATTGAAATATTAATTTTGTTTGTTTAATATGCAACTAATTAAATTTAGGTCCATTATAAATACCTATAATGCTCCCAACTACAGCATCATCAGCTGAAAGCATGTCTGCAAGCCTAGAGCAATATTATGCATACAAATTTAGCAACTCCTAAATGTTAATTGCTAATTTGTTAACTTTCAGCTACTCTTGATGTTCACTTTCTTCATACTGTCAATTTGCTTAGTAAACAGTGCATTTGTTTTGTGAACAAAATGTTATTTAACCATGTAATGTTGTGAAGTATGCTAATAGTTCAATACAAAATAGTCATCTAATATTGTGAAGTATGCTAATAGTCCAATACAAAGCAGCCAAGCAGAGCTGATACCTGCACTTTGATATATATTGTTCTTAATTCAAAGACAAAATTATCATTTTTATATCCTATTGTTTCAAATCAAAATGTACAAGGAAAGTGACCACAATGTTTTATGGCTAACATGTATTCGTATGTATGAAAGTAATTCCCAATTGAAGTTTTATTATTGAAGGGAATTTTCACCGTGCTTAAGAAATCTTGGTGAAATATTTTGTCTTGATACCGTAATTAAATCAAACAAAAATAAAAGACAAGACTTGACCAATAATGTATTATAAAATAAAACATATATCGTAAAATAAATGCATAAAATATTAAAATA</genome_strand>
        <mrna_strand>ATTTTCTTAATCTTGTATGAGGGTTGTCATCTTTACAACTATTGGGCTTTGTTC-ACTTTGTTTGGTGATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTTACTATAAAGATAGTATTAATCTTTAATTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACAT-TC---CATTTGGCTTTCTTATTTTCTTCCACTAATTCTCTTTTCTATTCCAATATGACAAAATGTAGTGTTTATGCTATTCTGGTTGACATTATCTTGCTAAATGATCTATCTATGACATAGTTTTAAAAAAAATAACATACTTTTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGAATTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTTTCATTTTGTGTTGTAAAAGTTATGTGATGCGATTCTGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGCATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATGTAATTAGTATTCCCACATATGAAAATGTTAAACTATGTAAGTATCTCACTTCGACATTCAGTAGTATGACATGCACACGAAAATATATTATGAACAAATTTGGCAGCTAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339828" ref_strand="+" ref_description="SGN-U339828        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G14610.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4912473-4914659 FORWARD | Aliases: MIE1.11 (evalue: 1e-37, score=146) genbank/nr: cytochrome(evalue: 3e-37, score=158)">
      <seq>ttatcatttatgagatcaatggagagttcttacagcgtgattataacaacaatttgtgttgtaattatgtagatctatacatggaaagtgttgaattgggcatggtttggaccaaaaaaattggaaaattgcttaaagcaaagaggtctaaaaggaaatccatataagttactctatggagatttgaatgaattgacaaaaagtatagttgaagctaaatctaagccattcaatttctcttatgatatagctcaaagactcattccttgtttcctcaacttcatcaacaaaaatggtaaaagttctttcatctggctaggcccctatccaatcgtgttgatcaccaaacctgaacatgtaaaggagattttcacaaagaattatgtgtatctaatgcaaactcatcccaatccattcaccaagttattggctaaaggtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="62144" stop="64786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62444" g_stop="62738" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.320" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64342" g_stop="64486" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="440" r_length="145" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U339828" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62444" e_stop="62738"/>
          <exon e_start="64342" e_stop="64486"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATGGTATGTCTCTCTTCGTCTTGCTTCGTTTCAATTTATCTGATGTTATTTGATTTAACACTTTGTTTCAAAACGAATTTTTGAAATTTGTATGTATATGTGACTATAAATATAATTTTTTTTGTAACTCACCAAAAAAAAAGTGAGCTATATTGATTAGGTGGGTAGTGTTTCTCTTTCTAGACTATAATCGAAAGTTTGGAGACACTTTACTAAATTAAGACTTTTTTTAGCCATCCTATATATATTTTAATTTTTTATAATTTTATACGCCTTTCAGCTTACCTGACATTTAAACATCTCTAACGCGTCATAACTGCGTTGAATTACATAGTATAGCACATAAGGAAAAAGGTGTGCAGACTAACAAATGAATTCAAGAAAGTAATAAGACTTTACTTTAGTTAATGTGTATCAATAAATTCCGATCAGACCGTATAAGATACTTATGCCTTTTTTTTTCTAGTTTACTTTTGTTCTTTTATGTGGTCCTGATTTTAGGTCAATTATTTTTTCTCTTTTTTTCAAGTATAGTGAAAAAAAATTATCTTCACAATTATGTAAATATATATATATATATATATATATATCAGATTGATATTAATCAAGACTTTGTGAAGATATGGTATACTGAGATGAGATTGTGTCACACACAGTTGTAAACATATATTGTAATTATCAATGAGGTGTCATTATCCATGTGTTAGTTAGAATTTTAACTTTAGTTTAATTCATTAGAACTCTTAAAGTTGTTCACGTAAATCACTTACACATCTCAACCCAACAATTTTATATCTATTGAACATTTCTATGGCTTAAAATTGAGACTTGTTTGATATTTTTTTGAGAATCGACTAAAAGTATATGATATATGTAATACACTTGTAGTGACATGACAAGGCGACAAATTAAATGATGACATATGACATTTTAGTCAAAAATTTGTCAGGAAAGTAAATAATTAGAAAAATTATTTTGAATTAATTTGTGAAATGCCTGTTACCTGTTTGTGAAAATGCCTGAATAAACTGTTTGAATTAGTTTTGAAAGGCCTATTACCTGTTTGTTAAAATGTCTGAATGAACTGTTTGATCAAGTTTTGAAATGCTTATTTCCTGTTTACTTTCATTAGTGATTTTGTTGTCGAATATATGCCTAATCGAGTTTATTGCTTTGTTTTACAGTTACTTCCTCATGATTTTATTATTGGGGAAAAAGACAAATATATTCTCGAACTATTGTAAATGTTATGCAGATATCCTCTGTCATATTTTGGAGACATTGCATATATGCCTTTTACTCTGACGAAAGACTAAACAGGAACACATGGTGCAATCTTATCTGTCGATTCAATATTTAATAAATGTTGGATCGGTGAATAAGATTATGACACGTGAATGTCAGTTAGTATAAAAGGTATGTATGCTCTAATTTTTTGACGACATGGGTACCAATGTCCCAAAAGTATGACGGAGGATATGTGGGTATATATCATTTACGCGAATTTGGGGGTATTCTTTGTCATATAAGAAGATAGTCTAGTTAAAATGTTCTTCTCTGTTTCTTTCATTTGTTTCTTCGTCTATTGAGCTAGCATTACTCGCAGGTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCT</genome_strand>
        <mrna_strand>TTATCATTTATGAGATCAATGGAGAGTTCTTACAGCGTGATTATAACAACAATTTGTGTTGTAATTATGTAGATCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAAGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCATTCAATTTCTCTTATGATATAGCTCAAAGACTCATTCCTTGTTTCCTCAACTTCATCAACAAAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACCAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAATGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323705" ref_strand="+" ref_description="SGN-U323705        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: AT3G14690.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4937386-4939472 FORWARD | Aliases: MIE1.19 (evalue: 8e-118, score=420) genbank/nr: cytochrome(evalue: 2e-120, score=435)">
      <seq>agattgttccaaagggaacatcaaccgagatcgatgtatggccagaccttgaaaagatgaccagtgaagtcatttctcgcacagcatttgggagtagctatgaagaaggaagaatagtatttgaacttcagaaggaacaagctgagcatgtaatggaagtagcacgttcaatttacatacctggatctaggttcttacctacaaaaagaaacaaaagaatgctggaaattgaaaaggaaattcaaacaacaattaggcgtatcattgacaagagattgagggcaatggaaggaggggagactagtaaagatgacttactaggcatattacttgaatccaatatgaaagaaattgaacaacacggaagcaaagatttcggaatgacaacagttgaagtgattgaagagtgcaagttattctattttgctggacaagagaccacttcagtgttgctcgtatggacaatgattttgttgtgcctacatcccgagtggcaagtacgtgccagagaggaggtgttgcaggtatttggaaatgataaaccagatttggaaggactaggtcgcttgaaaatagtgaccatgatcttgtatgagacgctaaggctattccccccattaccaacatttggtagaacgaataaagaagaagtgaaattgggggaattaaatctaccagctggagtgatactcatagtacccgcaatcttagtacattatgataaggaaatatggggtgaagacgcaaaggaattcaaaccagaaagatttagtgaaggagtgtcaaaggcaaccaaaggacaattctcgtttatcccatttggaggagggccgcgaatttgcattggacaaaactttgcaatgatggaagcaaaaatggcattagcaatgatactacaaaggttctccttcgaactctctccatcatatacacatgctccatttgcagtagtgactattcatcctcagtatggtgctcctctgcttatgcgcaaactctaagatgatattttacaccattcgtgttgtattgtcgatactaatttgtcacatgatgtcaagtcatgctttgaatttaaacgtttaacgttaaattgcagcttggttatcattatcaaaatttattggtcatctctgatgaacttcatattgcctcttggtggagcaaaagtttcttcttcttaaaggagtgtagcatatactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="64400" stop="66466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64700" g_stop="64889" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64999" g_stop="65383" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="575" r_length="385" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65535" g_stop="66166" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="1205" r_length="630" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U323705" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1207</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64700" e_stop="64889"/>
          <exon e_start="64999" e_stop="65383"/>
          <exon e_start="65535" e_stop="66166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAGGTACGATAATTTATTTATCATATATCGACAATTACCTTTCTTTGTCGTTACATAAGTACAATACAACAGAAGTTGTACTCTGCCTTTCTGCTAAATGACTGTTATATAGGTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATAGTAAGTACTGTCCACAAGTTCTTTTCAATAGTATGTTTTGTGTCCTCAATATAATGGTACTTGTTAGCCAAGAAATACTTGTAAGTTTGTTAAATCTTTTAGCAAAGCACCCCTAACTCTTCTGCCAACTTACGCGATCCTTTCTTCACAGGTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTT</genome_strand>
        <mrna_strand>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG.............................................................................................................GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA.......................................................................................................................................................GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTC--AAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGGAGTGTAGCATATACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330105" ref_strand="+" ref_description="SGN-U330105        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT4G23160.1 | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50 (evalue: 3e-26, score=115) genbank/nr: putative(evalue: 9e-48, score=192)">
      <seq>tacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggttgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgctatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="84060" stop="85308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84360" g_stop="85008" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U330105" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84360" e_stop="85008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTATAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</genome_strand>
        <mrna_strand>TACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345812" ref_strand="+" ref_description="SGN-U345812        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT4G23160.1 | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50 (evalue: 2e-39, score=159) genbank/nr: gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa (japonica cultivar-group)] >gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa (japonica cultivar-group)] (evalue: 1e-101, score=372)">
      <seq>gtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="84719" stop="86126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85019" g_stop="85826" g_length="808"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U345812" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85019" e_stop="85826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345364" ref_strand="+" ref_description="SGN-U345364        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G14640.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4919863-4921794 FORWARD | Aliases: MIE1.14 (evalue: 1e-63, score=240) genbank/nr: cytochrome(evalue: 5e-65, score=251)">
      <seq>cgttctttagagaagcctttttattaacttcatatggagtacttatcacttgtggaagtagagatgatagcaacaatttgtgttgcaattttgttagtaatatacacatggaaagtgttgaattgggcatggtttaggccaaagaaatttgagaaatacttaagaaaaagtggtcttaatggaaatccatacaaattactctatggagatttgaaggaactcacaaataaactcaatgaagccaagtctaagcccatcagtttctctggtgatgtacctcaaaggctcatcccttttttctgtgactccatcaacaaaaatggtaaaaattcttttgcctggctaggtcccaagcctatagtattcatcacagaaccttcacttataaagaaaatttttgaaaaacattatgtatatcacaagaataagcattctaatccattcgcgaagttattggttcaaggtctcgttacccttgaggaacagaaatgggctaagcatagaaaaatcatcaatcccgccttccattttgagaaactaaagcatatggttccagcattttatcagagttgtagcgaaatgctaaggaaatgggaggaggctgttccaaaggaaacatcagccgagctcgatgtatggccacattttcaactaatgaccggtgatgtcatttctcgaactgcatttgggagtagctatgaagaagggagaataatatttgaacttccaaaagaacaacctgagtatgtaatgggacaaattttttcgatttatataccaggggtcgaggtacctacaatattaaactatttgatcaaatttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="87877" stop="89876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88176" g_stop="88497" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88498" i_stop="88982" i_length="485">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88983" g_stop="89203" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="543" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89204" i_stop="89297" i_length="94">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89298" g_stop="89577" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="824" r_length="281" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U345364" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88176" e_stop="88497"/>
          <exon e_start="88983" e_stop="89203"/>
          <exon e_start="89298" e_stop="89577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTACTTTAGAGAAGCCTTTTTATTAACTTCATATGGAGTACTTATCACTTGTGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATGGTAAGTACAACAAACTACCAAGTTTGTTTAATCATATTCTTTTTCATGGACCAATCGTATAGTTTTTGATTTTTATACACGACTTGAATTCAGGATCTTTGTCTGATCTAATATCATGTTTAAATGTGTGAAGATAGTCCACTAGCGGTCATTTCTAGCTCGAATAATGTAATTTTGGGAGGAGTTCCGCAGTTCATATTTAGAATGTGTGATGCTAGGTTGGGGTTTGGTGAACCAACTAGTCGCTCCTCTAGTTGAAGTACCGTGACATAGTATAATTGAGTTTACGAATTCCGTATTCTTGAAAAAGCAGATTATTGAGTTCTTGATAAACTATTGATACGTATTAAATAGATTTTTAAACACAAATATAGAGTTTGAACTAAAGCTAGTACTAGTTTTGTTGAAACCGGTAGGCGATATGATCACTTACAATCTGTTTTAGTATAAGCTTTACTAACACAAAACTGATAAATACTCTGCAGGTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATCCCGCCTTCCATTTTGAGAAACTAAAGGTTTATACATACTACTATATCTTTTTGTTTTTGCGTATAGCTAGTATATAGAACTCAGTGATCATGAATGAAATTAACTTTGTCTGCGTAACAGCATATGGTTCCAGCATTTTATCAGAGTTGTAGCGAAATGCTAAGGAAATGGGAGGAGGCTGTTCCAAAGGAAACATCAGCCGAGCTCGATGTATGGCCACATTTTCAACTAATGACCGGTGATGTCATTTCTCGAACTGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAATATTTGAACTTCAAAAAGAACAAGCTGAGTATGTAATGGAACAAATTTTTTCGATTTATATACCA-GGGTCGAGGTACGTACAATATTAAACTATTTGATCAAATTTCT</genome_strand>
        <mrna_strand>CGTTCTTTAGAGAAGCCTTTTTATTAACTTCATATGGAGTACTTATCACTTGTGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATCCCGCCTTCCATTTTGAGAAACTAAAG..............................................................................................CATATGGTTCCAGCATTTTATCAGAGTTGTAGCGAAATGCTAAGGAAATGGGAGGAGGCTGTTCCAAAGGAAACATCAGCCGAGCTCGATGTATGGCCACATTTTCAACTAATGACCGGTGATGTCATTTCTCGAACTGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAATATTTGAACTTCCAAAAGAACAACCTGAGTATGTAATGGGACAAATTTTTTCGATTTATATACCAGGGGTCGAGGTACCTACAATATTAAACTATTTGATCAAATTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U347095" ref_strand="+" ref_description="SGN-U347095        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G14630.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4917505-4919416 FORWARD | Aliases: MIE1.13 (evalue: 3e-41, score=165) genbank/nr: cytochrome(evalue: 1e-40, score=169)">
      <seq>taagtcgcctcaaaattgtgactatgatcttgtacgagacgttaaggctgttcccccccgcactgttatatggtagaacaaacaaagatgaagtcaaattgggtgagctgagtctgccagctgaagtactactcattatacccgcaatcctagtacattataacaaggaattatggggtgaagacgcgaaggaattcaaaccagatcgattcagtgaaggagtgtcaaaggcaacaaacggacaagtctcgtttattccatttggttggggaccccgaatttgcatcggacaaaactttgtaatgacggaagcaaagatgacaatagcaatgatcctacagaagttctcgtttgaactctctccatcataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="89700" stop="100407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90000" g_stop="90016" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79">
            <donor d_prob="0.986" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90096" g_stop="90455" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="377" r_length="360" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90456" i_stop="91261" i_length="806">
            <donor d_prob="0.925" d_score="0.92"/>
            <acceptor a_prob="0.601" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91262" g_stop="91271" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="387" r_length="10" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U347095" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U347095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90000" e_stop="90016"/>
          <exon e_start="90096" e_stop="90455"/>
          <exon e_start="91262" e_stop="91271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTCGCCTCAAAATTGTAAGTACGTTTAACAATTTCTCTCATTAGTGCACTAATTCTAATGCCAACTTATGTTATACATGTTTGTTTTTCTTAGGTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACATGCTCCAGTTGCAGTAGTGTCTATTCATCCTCAGTATGGTGCTCCTCTGCATATGCGCAAACTTTAAGACTATTTACGGTCATTTGCATTGTACGTGTTGGGAAAGACAAGGCACTAATAAAGAATGTCTGACAGGATAACAACGGAAGAATACCCAAGTCTATACTTTCCCTTTTCGATTTGAACCAAGATAAAACAAACAACCACAAGCAATATGATAGTAAGGCAGCAAGTAATTCAACCAAACAAATATAACAAGACAATAATAAACCAATCACACAAGACACCAAGATTTACGTGGAAAACCCTTCGATGTGAAGAGTAAAAAACCACGGGACCAAAAGCTCCACTATAATCACCAAGAGTTACAATATTGTTCTCCAAAATTGGCCACAAAACAAAGTGCCAAACAACGAGCAACAACAAAATAAGATTGCACCAAATCTAGAGAATTAAAGGAGCAAAATCACCAATTTCGCAGCTACTGTTCACGACAGCAAAACTGAAGCTGCAGACCACCAAATCCAACTCTGTCAGTTCCTAATCAAAGATTGAGATGAAGATAATATGCTGTCCAAAAATCAGCTCAATCGGACAAGAAACGAAGCGGGAATCGCAATTTGAAGTTGGTTGTTATGGCTGGATTTTTGACTGCGAATTTCTCTCTTTTTTCTCTCTTTTGGCTGCTGAAAAACTCTCTAAAAAATCTGAAAATAAGACCTAAAATAGGCTTATATTTGCCTCATAAGAATGGGCTTATGGACAAAAATGGGTTGGTCCAAATTGGGCTTTTATTTATCCACATAGGAAGGGAAAA</genome_strand>
        <mrna_strand>TAAGTCGCCTCAAAATT...............................................................................GTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338087" ref_strand="+" ref_description="SGN-U338087        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>atttttcagagagagtttttcagcagctaaaagagagaaaaaagagagaaattcgcagtcaaaaatccagccataacaaccaacttcaaattgcgattcccgcttcgtttcttgtccgattgagctgatttttggacagcatattatcttcatctcaatctttgattaggaactgacagagttggatttggtggtctgcagcttcagttttgctgtcgtgaacagtagctgcgaaattggtgattttgctcctttaattctctagatttggagcaatcttattttgttgttgctcgttgtttgacactttgttttgtggccaattttggagaacaatattgtaactcttggtgattatagtggagcttttggacccgtggttttttactcttcacatcgaaggggtttccacgtaaatcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="-" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="91454" stop="90439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91161" g_stop="90739" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="3" r_stop="425" r_length="423" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="-" ref_id="SGN-U338087" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91161" e_stop="90739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTTAGAGAGTTTTTCAGCAGCCAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCACATCGAAGGGTTTTCCACGTAAATCTTGGTG</genome_strand>
        <mrna_strand>TTTTCAGAGAGAGTTTTTCAGCAGCTAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGAGCAATCTTATTTTGTTGTTGCTCGTTGTTTGACACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGACCCGTGGTTTTTTACTCTTCACATCGAAGGGGTTTCCACGTAAATCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339829" ref_strand="+" ref_description="SGN-U339829        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G14610.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4912473-4914659 FORWARD | Aliases: MIE1.11 (evalue: 4e-69, score=258) genbank/nr: cytochrome(evalue: 6e-74, score=280)">
      <seq>aacaataaacagtttgaaaaataaaatttcatggagattttgtataacacaattatagcaataatttgtgttgcaatattgttggtatatacatggagagtgttgaattgggcatggtttaggccaaaaaaattggagaatttcttaaggcaaagaggtctaaaaggaaatccatataagttactctatggagatttgaatgaactcacaaaaagtatagttgaagctaagtctaagtcaatcaatatctctgatgatataactcaaaggcttatcccttttttccttgactccatcaacaaaaatggtaaaagttctttcatgtggctaggcccatatccaacagtgttgatcacaaatcctgaacatgtaaaagagattttgacaaagaattatgtgtacctaaagcaaactcatccaaatccatttgcaaagttattggctcaaggtcttgtgttggttgaggaagacaaatgggcaaaacacagaaaaataatcaatcctgctttccatgttgagaagttaaagcatatgttgccagcattttatatgagttgtagtgaaatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="106266" stop="108119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106566" g_stop="106872" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106873" i_stop="107155" i_length="283">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107156" g_stop="107376" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="528" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107377" i_stop="107778" i_length="402">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.578" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107779" g_stop="107819" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="569" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U339829" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106566" e_stop="106872"/>
          <exon e_start="107156" e_stop="107376"/>
          <exon e_start="107779" e_stop="107819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATAAACAGTTTGAAAAATAAAATTTCATGGAGATTTTGTATAACACAATTATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATGGTATGTTTATTTTATTGATTCGACTAGAAAGTAAACACTGCAACTTTGAGTATGCATGTCTAAACACCTTAACTTTATGTGATTCGTTTATCTAAACTTTATGTGTCACGTACGAGACACGGTGGAGACAAGTTGGAAGTGTTTAGTTGCTAGTTGGACCAAGTTTAGGAGTCTAGATTTGCACCTCAAAGTTGGAGTGTTTACTTGTCAGCTGATATCATATTTGAGTGTTTGTTTATGTAGTATATGCCTTTTTTTATAATTGAAAATGGATTTTTGGCAGGTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAGGTTAAATATACTTCTTTTTTGTTGTATTGAATTGGGATATGGCACAAGTATCCCCTAGATTATGATCGAAATCTCACAGATACACCTTAACTAATCTAAGGTCCTATTACTCCATAAACTCATTTTTTGTGTAATTTTGTACAACTTTTGGCTTACGTGACACACTCTGTGACTCCACTTAAGTGAGGCGCGTGGGAGATGTTTGGAGGTCACGTAGGCCAAAAAAGGTGTACAAAATTACAAAAAAAAAAGTTCAAGGGTAATAGAACCTCAGTTTAGTTAAGGTGCGTCTCTAAAATTTCGGTCATAGACTATGGTTACTAGTCTCTTATCCCTATTGAATTTAGGCCAAAAAAAGCAGAAAATTCAATTTTCTTTTTTTTTTTCATTTGTTTTGTACAGCATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGAT</genome_strand>
        <mrna_strand>AACAATAAACAGTTTGAAAAATAAAATTTCATGGAGATTTTGTATAACACAATTATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATG...........................................................................................................................................................................................................................................................................................GTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................CATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337867" ref_strand="+" ref_description="SGN-U337867        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G14680.1 | Symbol: None | cytochrome P450, putative, similar to GB:Q05047 from (Catharanthus roseus) | chr3:4934428-4936570 FORWARD | Aliases: MIE1.1 (evalue: 3e-76, score=281) genbank/nr: cytochrome(evalue: 9e-81, score=303)">
      <seq>tttattaggcatattacttgaatccaatatgaaagaaattgaacaacacggaaacaaagatttcggattgacaacaacagaagtgattgaagaatgcaagttattctattttgctggacaggagaccacttcagtgttgctcgtgtggacgatggttttgctatgcctacatccagagtggcaagtacgggccagagaggaggttttacaggtcttcggaaatgaaaaaccagatttggaaggactaagtcacctcaaaattgtgacaatgatcttatacgagacattaaggctattccccccattaccggtatttagtagaaggaacaaagaagaagtcaaattaggggagctgcagctaccagctgaagtgatacttattatacctgcaatctttattcattatgacaaggaaatatggggcgaagatgcgaaggaattcaaaccagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0166A09-nG6fS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0166A09.1" temp_strand="+" temp_description="C07HBa0166A09.1  AC210359.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0166A09 upload_account_name:france">
        <position start="107922" stop="109236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108222" g_stop="108483" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108484" i_stop="108745" i_length="262">
            <donor d_prob="0.318" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108746" g_stop="108936" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="453" r_length="191" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0166A09.1" gen_strand="+" ref_id="SGN-U337867" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0166A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108222" e_stop="108483"/>
          <exon e_start="108746" e_stop="108936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAGATTTCGGATTGACAACAACAGAAGTGATTGAAGAATGCAAGTTATTCTATTTTGCTGGACAGGAGACCACTTCAGTGTTGCTCGTGTGGACGATGGTTTTGCTATGCCTACATCCAGAGTGGCAAGTACGGGCCAGAGAGGAGGTTTTACAGGTCTTCGGAAATGAAAAACCAGATTTGGAAGGACTAAGTCACCTCAAAATTGTAAGTACTTTCCGCTATGTCGTTGGCATAGATCAAACTTCAACAATCAAGGAAACTATAAAATCAGGATAAAACAAGTAGCTGTTAATGTGAAATCGTTCCGACTGGGCTCAGATAGCTAGGCCACTTCTATAATCCTATTTCAGTCTCGGAAGGGCAATTACTATGAGACTAAAATATCTCGCGAAGGCATGACCCCTGAATTTTGTAAGAAGTGAACTAATTCTACTTCCAACTTACGCAATGTATTTTTTTTCCATAGGTGACAATGATCTTATACGAGACATTAAGGCTATTCCCCCCATTACCGGTATTTAGTAGAAGGAACAAAGAAGAAGTCAAATTAGGGGAGCTGCAGCTACCAGCTGAAGTGATACTTATTATACCTGCAATCTTTATTCATTATGACAAGGAAATATGGGGCGAAGATGCGAAGGAATTCAAACCAGAAAG</genome_strand>
        <mrna_strand>TTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAGATTTCGGATTGACAACAACAGAAGTGATTGAAGAATGCAAGTTATTCTATTTTGCTGGACAGGAGACCACTTCAGTGTTGCTCGTGTGGACGATGGTTTTGCTATGCCTACATCCAGAGTGGCAAGTACGGGCCAGAGAGGAGGTTTTACAGGTCTTCGGAAATGAAAAACCAGATTTGGAAGGACTAAGTCACCTCAAAATT......................................................................................................................................................................................................................................................................GTGACAATGATCTTATACGAGACATTAAGGCTATTCCCCCCATTACCGGTATTTAGTAGAAGGAACAAAGAAGAAGTCAAATTAGGGGAGCTGCAGCTACCAGCTGAAGTGATACTTATTATACCTGCAATCTTTATTCATTATGACAAGGAAATATGGGGCGAAGATGCGAAGGAATTCAAACCAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>15</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="16329" PGL_stop="15944"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16329" e_stop="15944"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="16329" e_stop="15944" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16329" stop="15944"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346850" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGCCAGGGCCACTGTTATCTGCTCCCCGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGTGCTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTTAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCCTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAAATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</gDNA_template>
            <first_frame> R  K  W  R  L  V  D  D  F  F  F  I  I  L  L  S  H  F  T  A  R  A  T  V  I  C  S  P  I  T  G  E  V  F  S  A  L  W  V  A  M  G  R  Q  F  L  V  E  R  R  A  S  V  Q  Q  H  S  S  L  D  I  Y  L  R  L  S  R  L  S  F  V  Y  L  Q  T  K  Q  V  *  P  F  P  *  A  F  G  F  H  L  N  L  L  L  S  P  Y  L  *  R  Q  I  F  I  Q  C  C  D  R  S  F  V  N  R  R  G  R  V  Y  F  E  S  F  F  L  N  L  L  N   </first_frame>
            <second_frame>  E  N  G  G  L  *  T  I  S  S  S  S  S  S  S  V  T  S  R  P  G  P  L  L  S  A  P  R  S  R  A  R  Y  F  P  P  F  G  S  L  W  V  A  N  S  S  S  S  A  V  L  L  S  N  N  T  A  V  S  I  S  I  F  A  S  L  A  F  P  S  C  I  S  K  R  S  K  F  N  L  F  L  R  L  S  V  S  I  S  T  S  F  F  L  L  I  C  D  A  R  S  S  S  N  V  V  T  A  A  L  *  I  A  V  V  A  S  T  L  S  P  S  S  L  T  F  *  I  </second_frame>
            <third_frame>   K  M  E  A  C  R  R  F  L  L  H  H  P  P  Q  S  L  H  G  Q  G  H  C  Y  L  L  P  D  H  G  R  G  I  F  R  P  L  G  R  Y  G  S  P  I  P  R  R  A  P  C  F  C  P  T  T  Q  Q  S  R  Y  L  S  S  P  L  S  P  F  L  R  V  S  P  N  E  A  S  L  T  F  S  L  G  F  R  F  P  S  Q  P  P  S  F  S  L  S  V  T  P  D  L  H  P  M  L  *  P  Q  L  C  K  S  P  W  S  R  L  L  *  V  L  L  P  *  P  S  E  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16327" stop="16010"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMEACRRFLLHHPPQSLHGQGHCYLLPDHGRGIFRPLGRYGSPIPRRAPCFCPTTQQSRYLSSPLSPFLRVSPNEASLTFSLGFRFPSQPPSFSLSVTPDLHPML*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16310" stop="15996"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TISSSSSSSVTSRPGPLLSAPRSRARYFPPFGSLWVANSSSSAVLLSNNTAVSISIFASLAFPSCISKRSKFNLFLRLSVSISTSFFLLICDARSSSNVVTAAL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16329" stop="16093"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKWRLVDDFFFIILLSHFTARATVICSPITGEVFSALWVAMGRQFLVERRASVQQHSSLDIYLRLSRLSFVYLQTKQV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="17167" PGL_stop="16632"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17167" e_stop="16632"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="17167" e_stop="16632" e_length="536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17167" stop="16632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345356" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACCACAGTGGGCTGAGCCACCACAACGTCCGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAACTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGCAAAAAGGTACCTGAGAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAGCACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</gDNA_template>
            <first_frame> R  L  V  L  S  W  I  Y  V  *  *  R  E  V  D  R  R  S  C  I  S  S  I  S  T  K  S  R  W  R  R  I  L  S  P  L  H  F  N  F  H  F  S  N  L  L  H  Q  L  H  D  Q  F  V  L  F  H  H  S  G  L  S  H  H  N  V  R  K  T  P  F  V  I  V  V  S  H  N  C  F  S  F  V  *  T  *  S  R  E  G  I  C  R  T  F  R  S  G  E  V  R  M  I  C  Q  L  Y  *  H  R  S  A  K  R  Y  L  R  G  K  N  N  S  K  A  N  L  L  V  H  I  Q  S  T  K  C  I  I  S  H  I  K  Q  I  S  T  Q  V  V  L  F  E  D  I  L  T  H  E  *  G  R  I  Y  I  L  N  K  Q  E  F  V  C  L  A  L  S  W  E  I   </first_frame>
            <second_frame>  G  W  F  *  V  G  S  M  F  D  E  G  K  *  T  G  G  L  A  S  A  V  L  V  P  N  P  G  G  G  A  S  C  L  R  C  I  S  T  F  I  S  A  I  C  C  I  S  C  M  I  N  S  F  C  S  T  T  V  G  *  A  T  T  T  S  V  R  R  P  S  S  L  L  S  P  I  T  V  F  P  L  S  E  L  D  R  G  K  E  S  V  G  P  F  D  L  V  K  *  G  *  S  A  S  F  I  D  T  D  Q  Q  K  G  T  *  E  V  K  T  T  Q  R  Q  I  C  *  C  I  S  R  V  Q  N  A  *  Y  R  T  *  N  R  *  A  H  K  S  F  C  L  R  I  S  *  P  T  N  K  D  G  Y  I  F  *  T  N  R  N  L  F  V  W  R  Y  L  G  K  S  </second_frame>
            <third_frame>   A  G  S  E  L  D  L  C  L  M  K  G  S  R  P  E  V  L  H  Q  Q  Y  *  Y  Q  I  Q  V  E  A  H  P  V  S  V  A  F  Q  L  S  F  Q  Q  S  V  A  S  A  A  *  S  I  R  S  V  P  P  Q  W  A  E  P  P  Q  R  P  *  D  A  L  R  H  C  C  L  P  *  L  F  F  L  C  L  N  L  I  E  G  R  N  L  *  D  L  S  I  W  *  S  K  D  D  L  P  A  L  L  T  Q  I  S  K  K  V  P  E  R  *  K  Q  L  K  G  K  F  V  S  A  Y  P  E  Y  K  M  H  N  I  A  H  K  T  D  K  H  T  S  R  F  V  *  G  Y  L  N  P  R  I  R  T  D  I  Y  F  E  Q  T  G  I  C  L  F  G  A  I  L  G  N  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17134" stop="16916"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REVDRRSCISSISTKSRWRRILSPLHFNFHFSNLLHQLHDQFVLFHHSGLSHHNVRKTPFVIVVSHNCFSFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="23313" PGL_stop="24048"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23313" e_stop="24048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="23313" e_stop="24048" e_length="736"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23313" stop="24048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGTCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTATGATTATCCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAGAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTCCAAAGGGAAGTTCGCACCAAACTG</gDNA_template>
            <first_frame> *  L  G  E  W  M  S  S  A  L  *  N  R  S  L  P  M  D  T  D  L  F  W  L  P  S  I  I  S  P  N  G  W  K  Q  P  L  T  N  R  *  P  R  K  W  W  P  T  L  S  A  T  I  *  S  A  D  L  E  F  Q  N  P  S  S  L  I  T  V  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  *  L  S  T  E  G  Q  L  L  I  A  L  K  *  T  E  L  *  R  P  P  T  R  T  S  R  R  F  *  G  K  *  L  T  S  S  G  V  G  M  K  C  C  H  M  L  Y  W  V  I  E  R  R  S  E  H  Q  L  G  L  L  H  T  C  *  Y  T  E  Q  K  Q  S  Y  L  S  K  S  R  Y  R  H  *  G  S  S  K  K  P  S  *  V  M  L  S  G  L  A  N  G  L  I  N  *  P  *  L  M  K  R  G  W  L  L  F  V  M  A  S  C  I  D  K  E  *  L  A  L  F  T  E  E  *  E  P  E  I  L  K  L  V  S  W  F  L  S  V  F  F  L  I  K  T  S  P  K  G  S  S  H  Q  T  </first_frame>
            <second_frame>  S  L  G  N  G  C  H  R  P  Y  R  T  G  R  F  Q  W  T  Q  I  Y  F  G  C  H  R  L  F  H  Q  M  G  G  S  S  L  L  Q  I  G  N  Q  E  S  G  G  R  L  C  P  Q  Q  F  D  L  P  I  W  S  S  R  I  H  H  H  *  *  R  C  K  S  Q  Q  S  S  D  E  R  D  M  *  T  I  Y  D  Y  P  P  K  V  N  C  L  S  P  S  N  E  R  S  C  R  G  R  Q  Q  E  H  Q  E  D  S  E  E  N  D  *  Q  A  A  G  L  A  *  N  V  A  I  C  S  T  G  L  S  N  D  G  Q  N  I  N  W  G  Y  S  I  L  A  S  I  R  N  R  S  S  R  T  C  R  S  R  D  T  V  T  E  D  H  P  R  S  R  A  K  *  C  *  V  G  *  Q  T  D  *  S  T  S  L  D  *  *  K  E  D  G  C  C  L  S  W  P  V  V  *  T  K  N  D  S  R  F  S  Q  K  S  K  S  Q  K  F  *  S  W  S  V  G  S  *  A  Y  F  S  S  S  R  R  V  Q  R  E  V  R  T  K  L </second_frame>
            <third_frame>   A  W  G  M  D  V  I  G  P  I  E  P  V  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  V  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  G  V  P  E  S  I  I  T  D  N  G  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  M  I  I  H  R  R  S  T  A  Y  R  P  Q  M  N  G  A  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  M  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  A  T  P  Y  L  L  V  Y  G  T  E  A  V  V  P  V  E  V  E  I  P  S  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  S  K  R  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  Q  L  Y  R  Q  R  M  T  R  A  F  H  R  R  V  R  A  R  N  F  E  V  G  Q  L  V  L  K  R  I  F  P  H  Q  D  E  S  K  G  K  F  A  P  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23315" stop="24046"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AWGMDVIGPIEPVASNGHRFILVAIDYFTKWVEAASYKSVTKKVVADFVRNNLICRFGVPESIITDNGANLNSHLMKEICEQFMIIHRRSTAYRPQMNGAVEAANKNIKKILRKMIDKQRGWHEMLPYALLGYRTTVRTSTGATPYLLVYGTEAVVPVEVEIPSLRIIQEAELSNAEWVSKRIDQLALIDEKRMVAVCHGQLYRQRMTRAFHRRVRARNFEVGQLVLKRIFPHQDESKGKFAPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="47735" PGL_stop="43243"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47735" e_stop="47503"/>
            <exon e_start="47264" e_stop="47047"/>
            <exon e_start="44061" e_stop="43814"/>
            <exon e_start="43609" e_stop="43243"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="0.995"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47735" e_stop="47503" e_length="233"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.849">
            <gDNA_intron_boundary i_start="47502" i_stop="47265" i_length="238"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="47264" e_stop="47047" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="47046" i_stop="44062" i_length="2985"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="44061" e_stop="43814" e_length="248"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43813" i_stop="43610" i_length="204"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="43609" e_stop="43243" e_length="367"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47735" stop="47503"/>
              <exon start="47264" stop="47047"/>
              <exon start="44061" stop="43814"/>
              <exon start="43609" stop="43243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325176" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAGTAATATATGCATGGAAGTTGTTAGATTGGGCATGGTTTAGGCCAAGAAAACTAGAAAAATGCCTAAGAAAACAAGGTCTCAAAGGGAACTCTTACAAATTAATTTTTGGAGATCTCAAAGAGTTAGCCAAAAGCTTTGAAGATGTTAAGTCCAAGCCATTGAATGTCTTTGATGATGACATAACTCCTAGAATTGTTCCTTATTTTGTTGATACAATCAAGAAACATG : GTAAAAATTGTTTTATATGGATTGGGCCAAAGCCTATGGTATTAGTAAATGATGCTGAGGTAATAAGAGATGTGTTTAACAAATATGTTCTCTACCAAAAGCCTAAACCAACTCCCCTCACCAAGTTGCTAGCACAAGGACTTGCAAGCTATGAAGAGGATAAATGGGCAATGCATAGAAAAATCCTCAATCCTGCTTTCCATATGGAGAAGATTAAG : AATATGGTTCCAGCAATTCATTTGAGCTGCACTGAAATGGTGAGCCAATGGGAGGAGTCAATCTCAACGAAAGGAACATCTTGTGAAATCGATATATGGCCTTACCTTCAAAAATTGTCTAGTGATGTGATTTCTCGAACAGCCTTTGGAAGCAACTATGAAGAAGGTCGAATGATATTTGAGCTTCAAAAAGAACAAGCTCAGCATTTCATTGAAGCTACTCGTACCTTGTATATTCTAGGATCGAG : GTTTTTGCCAACTAAGAAAAATCGAAGGATGAAGGAGATCGATAAAAACGTTCAAGCAATGATTAGAGGAATAATTGATAAAAGAGTGAAGGCATTGAAAGCAGGGGAGGCCAATACTGATGACTTATTAGGGATGTTGTTGGAATCCAACTTTAAACAAATTGAACAACATGGCAACAAGGATTTTGGTATGAGTACGCGAGAGATCATCGAGGAGTGTAAATTGTTCTATTTTGCTGGACAAGAAACCACCTCTGTATTGCTTGTATGGACTATGATTTTGTTGAGTAGACATCTAGATTGGCAAACTCGCGCTAGAGAAGAGGTTTTGCAAGTCTTCGGTGATAGCAAACTAGAATTTGATGGA</gDNA_template>
            <first_frame> F  S  N  I  C  M  E  V  V  R  L  G  M  V  *  A  K  K  T  R  K  M  P  K  K  T  R  S  Q  R  E  L  L  Q  I  N  F  W  R  S  Q  R  V  S  Q  K  L  *  R  C  *  V  Q  A  I  E  C  L  *  *  *  H  N  S  *  N  C  S  L  F  C  *  Y  N  Q  E  T  W :   *  K  L  F  Y  M  D  W  A  K  A  Y  G  I  S  K  *  C  *  G  N  K  R  C  V  *  Q  I  C  S  L  P  K  A  *  T  N  S  P  H  Q  V  A  S  T  R  T  C  K  L  *  R  G  *  M  G  N  A  *  K  N  P  Q  S  C  F  P  Y  G  E  D  *   : E  Y  G  S  S  N  S  F  E  L  H  *  N  G  E  P  M  G  G  V  N  L  N  E  R  N  I  L  *  N  R  Y  M  A  L  P  S  K  I  V  *  *  C  D  F  S  N  S  L  W  K  Q  L  *  R  R  S  N  D  I  *  A  S  K  R  T  S  S  A  F  H  *  S  Y  S  Y  L  V  Y  S  R  I  E  :  V  F  A  N  *  E  K  S  K  D  E  G  D  R  *  K  R  S  S  N  D  *  R  N  N  *  *  K  S  E  G  I  E  S  R  G  G  Q  Y  *  *  L  I  R  D  V  V  G  I  Q  L  *  T  N  *  T  T  W  Q  Q  G  F  W  Y  E  Y  A  R  D  H  R  G  V  *  I  V  L  F  C  W  T  R  N  H  L  C  I  A  C  M  D  Y  D  F  V  E  *  T  S  R  L  A  N  S  R  *  R  R  G  F  A  S  L  R  *  *  Q  T  R  I  *  W  </first_frame>
            <second_frame>  S  V  I  Y  A  W  K  L  L  D  W  A  W  F  R  P  R  K  L  E  K  C  L  R  K  Q  G  L  K  G  N  S  Y  K  L  I  F  G  D  L  K  E  L  A  K  S  F  E  D  V  K  S  K  P  L  N  V  F  D  D  D  I  T  P  R  I  V  P  Y  F  V  D  T  I  K  K  H   : G  K  N  C  F  I  W  I  G  P  K  P  M  V  L  V  N  D  A  E  V  I  R  D  V  F  N  K  Y  V  L  Y  Q  K  P  K  P  T  P  L  T  K  L  L  A  Q  G  L  A  S  Y  E  E  D  K  W  A  M  H  R  K  I  L  N  P  A  F  H  M  E  K  I  K  :  N  M  V  P  A  I  H  L  S  C  T  E  M  V  S  Q  W  E  E  S  I  S  T  K  G  T  S  C  E  I  D  I  W  P  Y  L  Q  K  L  S  S  D  V  I  S  R  T  A  F  G  S  N  Y  E  E  G  R  M  I  F  E  L  Q  K  E  Q  A  Q  H  F  I  E  A  T  R  T  L  Y  I  L  G  S  R :   F  L  P  T  K  K  N  R  R  M  K  E  I  D  K  N  V  Q  A  M  I  R  G  I  I  D  K  R  V  K  A  L  K  A  G  E  A  N  T  D  D  L  L  G  M  L  L  E  S  N  F  K  Q  I  E  Q  H  G  N  K  D  F  G  M  S  T  R  E  I  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  S  R  H  L  D  W  Q  T  R  A  R  E  E  V  L  Q  V  F  G  D  S  K  L  E  F  D  G </second_frame>
            <third_frame>   Q  *  Y  M  H  G  S  C  *  I  G  H  G  L  G  Q  E  N  *  K  N  A  *  E  N  K  V  S  K  G  T  L  T  N  *  F  L  E  I  S  K  S  *  P  K  A  L  K  M  L  S  P  S  H  *  M  S  L  M  M  T  *  L  L  E  L  F  L  I  L  L  I  Q  S  R  N  M  :  V  K  I  V  L  Y  G  L  G  Q  S  L  W  Y  *  *  M  M  L  R  *  *  E  M  C  L  T  N  M  F  S  T  K  S  L  N  Q  L  P  S  P  S  C  *  H  K  D  L  Q  A  M  K  R  I  N  G  Q  C  I  E  K  S  S  I  L  L  S  I  W  R  R  L  R :   I  W  F  Q  Q  F  I  *  A  A  L  K  W  *  A  N  G  R  S  Q  S  Q  R  K  E  H  L  V  K  S  I  Y  G  L  T  F  K  N  C  L  V  M  *  F  L  E  Q  P  L  E  A  T  M  K  K  V  E  *  Y  L  S  F  K  K  N  K  L  S  I  S  L  K  L  L  V  P  C  I  F  *  D  R   : G  F  C  Q  L  R  K  I  E  G  *  R  R  S  I  K  T  F  K  Q  *  L  E  E  *  L  I  K  E  *  R  H  *  K  Q  G  R  P  I  L  M  T  Y  *  G  C  C  W  N  P  T  L  N  K  L  N  N  M  A  T  R  I  L  V  *  V  R  E  R  S  S  R  S  V  N  C  S  I  L  L  D  K  K  P  P  L  Y  C  L  Y  G  L  *  F  C  *  V  D  I  *  I  G  K  L  A  L  E  K  R  F  C  K  S  S  V  I  A  N  *  N  L  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47734" stop="47503"/>
                    <exon start="47264" stop="47047"/>
                    <exon start="44061" stop="43814"/>
                    <exon start="43609" stop="43243"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1065</number_coding_nucleotides>
                  <number_encoded_amino_acids>355</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVIYAWKLLDWAWFRPRKLEKCLRKQGLKGNSYKLIFGDLKELAKSFEDVKSKPLNVFDDDITPRIVPYFVDTIKKHGKNCFIWIGPKPMVLVNDAEVIRDVFNKYVLYQKPKPTPLTKLLAQGLASYEEDKWAMHRKILNPAFHMEKIKNMVPAIHLSCTEMVSQWEESISTKGTSCEIDIWPYLQKLSSDVISRTAFGSNYEEGRMIFELQKEQAQHFIEATRTLYILGSRFLPTKKNRRMKEIDKNVQAMIRGIIDKRVKALKAGEANTDDLLGMLLESNFKQIEQHGNKDFGMSTREIIEECKLFYFAGQETTSVLLVWTMILLSRHLDWQTRAREEVLQVFGDSKLEFDG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="45125" e_stop="44684"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="45125" e_stop="44684" e_length="442"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45125" stop="44684"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344226" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAATTAAAATATACCTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAACAAATACAAATTTAAAACTAAGTTTCTAACTTCCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGCAAGGGCATAATGAGCCACTTTTATAACTAGGGGTATATCAGCTCCAAATGACAAAGTTAAGGGGTATATCAGACCCTTTTCCCT</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  H  T  K  K  I  V  *  F  F  F  F  K  L  R  N  E  R  K  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  N  *  N  I  P  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  K  K  N  *  K  *  Q  I  Q  I  *  N  *  V  S  N  F  R  *  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  P  F  V  *  R  Q  G  H  N  E  P  L  L  *  L  G  V  Y  Q  L  Q  M  T  K  L  R  G  I  S  D  P  F  P  </first_frame>
            <second_frame>  Y  C  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  Q  K  K  *  F  N  F  F  S  L  N  *  G  M  K  E  K  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  I  K  I  Y  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  L  K  K  I  R  S  N  K  Y  K  F  K  T  K  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  G  K  G  I  M  S  H  F  Y  N  *  G  Y  I  S  S  K  *  Q  S  *  G  V  Y  Q  T  L  F  P </second_frame>
            <third_frame>   I  V  D  D  Q  I  F  S  S  N  T  K  L  N  Y  N  T  H  K  K  N  S  L  I  F  F  L  *  T  K  E  *  K  K  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  L  K  Y  T  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  *  K  K  L  E  V  T  N  T  N  L  K  L  S  F  *  L  P  L  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  A  R  A  *  *  A  T  F  I  T  R  G  I  S  A  P  N  D  K  V  K  G  Y  I  R  P  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0166A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="53495" PGL_stop="54865"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53495" e_stop="54160"/>
            <exon e_start="54821" e_stop="54865"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.931"/>
          <exon-only e_score="0.644"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="53495" e_stop="54160" e_length="666"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="54161" i_stop="54820" i_length="660"/>
          </intron>
          <exon e_serial="2" e_score="0.644">
            <gDNA_exon_boundary e_start="54821" e_stop="54865" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53495" stop="54160"/>
              <exon start="54821" stop="54865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313688" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCTTAATCTTGGATGAGGGTGGTCATTTTTACACCTATTGAGCTTTGTTCAACTTTGTTTGGTCATATTGTCACTTTGCTTTCTTGACTGTTTTTGCAATCTTTCACTATAAACATAATATTAATCTTTAACTAAGATCTCATTTCATACATTTGTAATTGATGCTTTACATGCCAAACATTTGACTTTCTTATTTTCTTTCACTAATTCTCTATTCTATTCCAATACGACAAAATGTAGTGTTTGTGCTATTCTGATTGACATTATCTTGCTAAATGATCTATTTATGAGAGAGTTTAAAAAAATAACATACTTCTGTTCATATTGGTGTTATTATATAAAATGTCTTATGTCAATCGTGAAATAGGGCTTCAAAGATGAGGCTTAGTTGAAGCTTAATGTTGCCACATTTTTTCCATTTTGTCTTGTATAAGTTATGTGATGTGATTATGTGCTAACAGGTGATTTTTTATCAAAGATGATCCAGAAGATCCAAGCATGAAAGATGTATCTGTTTTTGTCTAATTCTATACAGTATGTAAATGTATATAATTAGTATTCCCACATATGAAAATGTTAAACTAAGTAAGTATCTCACTTCGACATTCAGTAGTATGACATTCACATGAAAATATATTATGAACAAATTTGGCAGCTATAAT : AAATAAAACATATATCGTAAAATAAATGCATAAAATATTAAAATA</gDNA_template>
            <first_frame> I  F  L  I  L  D  E  G  G  H  F  Y  T  Y  *  A  L  F  N  F  V  W  S  Y  C  H  F  A  F  L  T  V  F  A  I  F  H  Y  K  H  N  I  N  L  *  L  R  S  H  F  I  H  L  *  L  M  L  Y  M  P  N  I  *  L  S  Y  F  L  S  L  I  L  Y  S  I  P  I  R  Q  N  V  V  F  V  L  F  *  L  T  L  S  C  *  M  I  Y  L  *  E  S  L  K  K  *  H  T  S  V  H  I  G  V  I  I  *  N  V  L  C  Q  S  *  N  R  A  S  K  M  R  L  S  *  S  L  M  L  P  H  F  F  H  F  V  L  Y  K  L  C  D  V  I  M  C  *  Q  V  I  F  Y  Q  R  *  S  R  R  S  K  H  E  R  C  I  C  F  C  L  I  L  Y  S  M  *  M  Y  I  I  S  I  P  T  Y  E  N  V  K  L  S  K  Y  L  T  S  T  F  S  S  M  T  F  T  *  K  Y  I  M  N  K  F  G  S  Y  N  :  K  *  N  I  Y  R  K  I  N  A  *  N  I  K  I </first_frame>
            <second_frame>  F  S  *  S  W  M  R  V  V  I  F  T  P  I  E  L  C  S  T  L  F  G  H  I  V  T  L  L  S  *  L  F  L  Q  S  F  T  I  N  I  I  L  I  F  N  *  D  L  I  S  Y  I  C  N  *  C  F  T  C  Q  T  F  D  F  L  I  F  F  H  *  F  S  I  L  F  Q  Y  D  K  M  *  C  L  C  Y  S  D  *  H  Y  L  A  K  *  S  I  Y  E  R  V  *  K  N  N  I  L  L  F  I  L  V  L  L  Y  K  M  S  Y  V  N  R  E  I  G  L  Q  R  *  G  L  V  E  A  *  C  C  H  I  F  S  I  L  S  C  I  S  Y  V  M  *  L  C  A  N  R  *  F  F  I  K  D  D  P  E  D  P  S  M  K  D  V  S  V  F  V  *  F  Y  T  V  C  K  C  I  *  L  V  F  P  H  M  K  M  L  N  *  V  S  I  S  L  R  H  S  V  V  *  H  S  H  E  N  I  L  *  T  N  L  A  A  I  I :   N  K  T  Y  I  V  K  *  M  H  K  I  L  K   </second_frame>
            <third_frame>   F  L  N  L  G  *  G  W  S  F  L  H  L  L  S  F  V  Q  L  C  L  V  I  L  S  L  C  F  L  D  C  F  C  N  L  S  L  *  T  *  Y  *  S  L  T  K  I  S  F  H  T  F  V  I  D  A  L  H  A  K  H  L  T  F  L  F  S  F  T  N  S  L  F  Y  S  N  T  T  K  C  S  V  C  A  I  L  I  D  I  I  L  L  N  D  L  F  M  R  E  F  K  K  I  T  Y  F  C  S  Y  W  C  Y  Y  I  K  C  L  M  S  I  V  K  *  G  F  K  D  E  A  *  L  K  L  N  V  A  T  F  F  P  F  C  L  V  *  V  M  *  C  D  Y  V  L  T  G  D  F  L  S  K  M  I  Q  K  I  Q  A  *  K  M  Y  L  F  L  S  N  S  I  Q  Y  V  N  V  Y  N  *  Y  S  H  I  *  K  C  *  T  K  *  V  S  H  F  D  I  Q  *  Y  D  I  H  M  K  I  Y  Y  E  Q  I  W  Q  L  *   : *  I  K  H  I  S  *  N  K  C  I  K  Y  *  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53623" stop="53865"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLTKISFHTFVIDALHAKHLTFLFSFTNSLFYSNTTKCSVCAILIDIILLNDLFMREFKKITYFCSYWCYYIKCLMSIVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="62444" PGL_stop="64486"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62444" e_stop="62738"/>
            <exon e_start="64342" e_stop="64486"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.320" e_score="0.956"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="62444" e_stop="62738" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.320">
            <gDNA_intron_boundary i_start="62739" i_stop="64341" i_length="1603"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="64342" e_stop="64486" e_length="145"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62444" stop="62738"/>
              <exon start="64342" stop="64486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339828" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTATCATTTATGAGATCAATGGAGATTTCTTACAACATAATTATAACAACAATTTGTGTTGTAATTTTGTTGTTCTATACATGGAAAGTGTTGAATTGGGCATGGTTTGGACCAAAAAAATTGGAAAATTGCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAATTGACAAAAAGTATAGTTGAAGCTAAATCTAAGCCAATCAATTTCTCTGATGATATAGCTCAAAGACTCATCCCTTTTTTCCTCAACTCCATCAACAAAAATG : GTAAAAGTTCTTTCATCTGGCTAGGCCCCTATCCAATCGTGTTGATCACGAAACCTGAACATGTAAAGGAGATTTTCACAAAGAATTATGTGTATCTAAAGCAAACTCATCCCAATCCATTCACCAAGTTATTGGCTAAAGGTCT</gDNA_template>
            <first_frame> L  S  F  M  R  S  M  E  I  S  Y  N  I  I  I  T  T  I  C  V  V  I  L  L  F  Y  T  W  K  V  L  N  W  A  W  F  G  P  K  K  L  E  N  C  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  P  I  N  F  S  D  D  I  A  Q  R  L  I  P  F  F  L  N  S  I  N  K  N   : G  K  S  S  F  I  W  L  G  P  Y  P  I  V  L  I  T  K  P  E  H  V  K  E  I  F  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  T  K  L  L  A  K  G   </first_frame>
            <second_frame>  Y  H  L  *  D  Q  W  R  F  L  T  T  *  L  *  Q  Q  F  V  L  *  F  C  C  S  I  H  G  K  C  *  I  G  H  G  L  D  Q  K  N  W  K  I  A  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  *  Q  K  V  *  L  K  L  N  L  S  Q  S  I  S  L  M  I  *  L  K  D  S  S  L  F  S  S  T  P  S  T  K  M  :  V  K  V  L  S  S  G  *  A  P  I  Q  S  C  *  S  R  N  L  N  M  *  R  R  F  S  Q  R  I  M  C  I  *  S  K  L  I  P  I  H  S  P  S  Y  W  L  K  V  </second_frame>
            <third_frame>   I  I  Y  E  I  N  G  D  F  L  Q  H  N  Y  N  N  N  L  C  C  N  F  V  V  L  Y  M  E  S  V  E  L  G  M  V  W  T  K  K  I  G  K  L  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  I  D  K  K  Y  S  *  S  *  I  *  A  N  Q  F  L  *  *  Y  S  S  K  T  H  P  F  F  P  Q  L  H  Q  Q  K  W :   *  K  F  F  H  L  A  R  P  L  S  N  R  V  D  H  E  T  *  T  C  K  G  D  F  H  K  E  L  C  V  S  K  A  N  S  S  Q  S  I  H  Q  V  I  G  *  R  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62444" stop="62738"/>
                    <exon start="64342" stop="64484"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSFMRSMEISYNIIITTICVVILLFYTWKVLNWAWFGPKKLENCLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKPINFSDDIAQRLIPFFLNSINKNGKSSFIWLGPYPIVLITKPEHVKEIFTKNYVYLKQTHPNPFTKLLAKG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="64700" PGL_stop="66166"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64700" e_stop="64889"/>
            <exon e_start="64999" e_stop="65383"/>
            <exon e_start="65535" e_stop="66166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64700" e_stop="64889" e_length="190"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="64890" i_stop="64998" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64999" e_stop="65383" e_length="385"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65384" i_stop="65534" i_length="151"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="65535" e_stop="66166" e_length="632"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64700" stop="64889"/>
              <exon start="64999" stop="65383"/>
              <exon start="65535" stop="66166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323705" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATTGTTCCAAAGGGAACATCAACCGAGATCGATGTATGGCCAGACCTTGAAAAGATGACCAGTGAAGTCATTTCTCGCACAGCATTTGGGAGTAGCTATGAAGAAGGAAGAATAGTATTTGAACTTCAGAAGGAACAAGCTGAGCATGTAATGGAAGTAGCACGTTCAATTTACATACCTGGATCTAG : GTTCTTACCTACAAAAAGAAACAAAAGAATGCTGGAAATTGAAAAGGAAATTCAAACAACAATTAGGCGTATCATTGACAAGAGATTGAGGGCAATGGAAGGAGGGGAGACTAGTAAAGATGACTTACTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAGCAAAGATTTCGGAATGACAACAGTTGAAGTGATTGAAGAGTGCAAGTTATTCTATTTTGCTGGACAAGAGACCACTTCAGTGTTGCTCGTATGGACAATGATTTTGTTGTGCCTACATCCCGAGTGGCAAGTACGTGCCAGAGAGGAGGTGTTGCAGGTATTTGGAAATGATAAACCAGATTTGGAAGGACTAGGTCGCTTGAAAATA : GTGACCATGATCTTGTATGAGACGCTAAGGCTATTCCCCCCATTACCAACATTTGGTAGAACGAATAAAGAAGAAGTGAAATTGGGGGAATTAAATCTACCAGCTGGAGTGATACTCATAGTACCCGCAATCTTAGTACATTATGATAAGGAAATATGGGGTGAAGACGCAAAGGAATTCAAACCAGAAAGATTTAGTGAAGGAGTGTCAAAGGCAACCAAAGGACAATTCTCGTTTATCCCATTTGGAGGAGGGCCGCGAATTTGCATTGGACAAAACTTTGCAATGATGGAAGCAAAAATGGCATTAGCAATGATACTACAAAGGTTCTCCTTCGAACTCTCTCCATCATATACACATGCTCCATTTGCAGTAGTGACTATTCATCCTCAGTATGGTGCTCCTCTGCTTATGCGCAAACTCTAAGATGATATTTTACACCATTCGTGTTGTATTGTCGATACTAATTTGTCACATGATGTCTGAAGTCATGCTTTGAATTTAAACGTTTAACGTTAAATTGCAGCTTGGTTATCATTATCAAAATTTATTGGTCATCTCTGATGAACTTCATATTGCCTCTTGGTGGAGCAAAAGTTTCTTCTTCTTAAAGTTGTGTAGCATATACTTTT</gDNA_template>
            <first_frame> R  L  F  Q  R  E  H  Q  P  R  S  M  Y  G  Q  T  L  K  R  *  P  V  K  S  F  L  A  Q  H  L  G  V  A  M  K  K  E  E  *  Y  L  N  F  R  R  N  K  L  S  M  *  W  K  *  H  V  Q  F  T  Y  L  D  L   : G  S  Y  L  Q  K  E  T  K  E  C  W  K  L  K  R  K  F  K  Q  Q  L  G  V  S  L  T  R  D  *  G  Q  W  K  E  G  R  L  V  K  M  T  Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  A  K  I  S  E  *  Q  Q  L  K  *  L  K  S  A  S  Y  S  I  L  L  D  K  R  P  L  Q  C  C  S  Y  G  Q  *  F  C  C  A  Y  I  P  S  G  K  Y  V  P  E  R  R  C  C  R  Y  L  E  M  I  N  Q  I  W  K  D  *  V  A  *  K  * :   *  P  *  S  C  M  R  R  *  G  Y  S  P  H  Y  Q  H  L  V  E  R  I  K  K  K  *  N  W  G  N  *  I  Y  Q  L  E  *  Y  S  *  Y  P  Q  S  *  Y  I  M  I  R  K  Y  G  V  K  T  Q  R  N  S  N  Q  K  D  L  V  K  E  C  Q  R  Q  P  K  D  N  S  R  L  S  H  L  E  E  G  R  E  F  A  L  D  K  T  L  Q  *  W  K  Q  K  W  H  *  Q  *  Y  Y  K  G  S  P  S  N  S  L  H  H  I  H  M  L  H  L  Q  *  *  L  F  I  L  S  M  V  L  L  C  L  C  A  N  S  K  M  I  F  Y  T  I  R  V  V  L  S  I  L  I  C  H  M  M  S  E  V  M  L  *  I  *  T  F  N  V  K  L  Q  L  G  Y  H  Y  Q  N  L  L  V  I  S  D  E  L  H  I  A  S  W  W  S  K  S  F  F  F  L  K  L  C  S  I  Y  F  </first_frame>
            <second_frame>  D  C  S  K  G  N  I  N  R  D  R  C  M  A  R  P  *  K  D  D  Q  *  S  H  F  S  H  S  I  W  E  *  L  *  R  R  K  N  S  I  *  T  S  E  G  T  S  *  A  C  N  G  S  S  T  F  N  L  H  T  W  I  *  :  V  L  T  Y  K  K  K  Q  K  N  A  G  N  *  K  G  N  S  N  N  N  *  A  Y  H  *  Q  E  I  E  G  N  G  R  R  G  D  *  *  R  *  L  T  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  N  D  N  S  *  S  D  *  R  V  Q  V  I  L  F  C  W  T  R  D  H  F  S  V  A  R  M  D  N  D  F  V  V  P  T  S  R  V  A  S  T  C  Q  R  G  G  V  A  G  I  W  K  *  *  T  R  F  G  R  T  R  S  L  E  N   : S  D  H  D  L  V  *  D  A  K  A  I  P  P  I  T  N  I  W  *  N  E  *  R  R  S  E  I  G  G  I  K  S  T  S  W  S  D  T  H  S  T  R  N  L  S  T  L  *  *  G  N  M  G  *  R  R  K  G  I  Q  T  R  K  I  *  *  R  S  V  K  G  N  Q  R  T  I  L  V  Y  P  I  W  R  R  A  A  N  L  H  W  T  K  L  C  N  D  G  S  K  N  G  I  S  N  D  T  T  K  V  L  L  R  T  L  S  I  I  Y  T  C  S  I  C  S  S  D  Y  S  S  S  V  W  C  S  S  A  Y  A  Q  T  L  R  *  Y  F  T  P  F  V  L  Y  C  R  Y  *  F  V  T  *  C  L  K  S  C  F  E  F  K  R  L  T  L  N  C  S  L  V  I  I  I  K  I  Y  W  S  S  L  M  N  F  I  L  P  L  G  G  A  K  V  S  S  S  *  S  C  V  A  Y  T  F </second_frame>
            <third_frame>   I  V  P  K  G  T  S  T  E  I  D  V  W  P  D  L  E  K  M  T  S  E  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  V  F  E  L  Q  K  E  Q  A  E  H  V  M  E  V  A  R  S  I  Y  I  P  G  S  R :   F  L  P  T  K  R  N  K  R  M  L  E  I  E  K  E  I  Q  T  T  I  R  R  I  I  D  K  R  L  R  A  M  E  G  G  E  T  S  K  D  D  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  S  K  D  F  G  M  T  T  V  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  I  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  D  K  P  D  L  E  G  L  G  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  T  F  G  R  T  N  K  E  E  V  K  L  G  E  L  N  L  P  A  G  V  I  L  I  V  P  A  I  L  V  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E  R  F  S  E  G  V  S  K  A  T  K  G  Q  F  S  F  I  P  F  G  G  G  P  R  I  C  I  G  Q  N  F  A  M  M  E  A  K  M  A  L  A  M  I  L  Q  R  F  S  F  E  L  S  P  S  Y  T  H  A  P  F  A  V  V  T  I  H  P  Q  Y  G  A  P  L  L  M  R  K  L  *  D  D  I  L  H  H  S  C  C  I  V  D  T  N  L  S  H  D  V  *  S  H  A  L  N  L  N  V  *  R  *  I  A  A  W  L  S  L  S  K  F  I  G  H  L  *  *  T  S  Y  C  L  L  V  E  Q  K  F  L  L  L  K  V  V  *  H  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64702" stop="64889"/>
                    <exon start="64999" stop="65383"/>
                    <exon start="65535" stop="65960"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>996</number_coding_nucleotides>
                  <number_encoded_amino_acids>332</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVPKGTSTEIDVWPDLEKMTSEVISRTAFGSSYEEGRIVFELQKEQAEHVMEVARSIYIPGSRFLPTKRNKRMLEIEKEIQTTIRRIIDKRLRAMEGGETSKDDLLGILLESNMKEIEQHGSKDFGMTTVEVIEECKLFYFAGQETTSVLLVWTMILLCLHPEWQVRAREEVLQVFGNDKPDLEGLGRLKIVTMILYETLRLFPPLPTFGRTNKEEVKLGELNLPAGVILIVPAILVHYDKEIWGEDAKEFKPERFSEGVSKATKGQFSFIPFGGGPRICIGQNFAMMEAKMALAMILQRFSFELSPSYTHAPFAVVTIHPQYGAPLLMRKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="84360" PGL_stop="85008"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84360" e_stop="85008"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="84360" e_stop="85008" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84360" stop="85008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTATAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</gDNA_template>
            <first_frame> Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  *  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  F  *  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  R  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  *  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  V  S  T  W  R  V  G  G  R  D  I  H  D  </first_frame>
            <second_frame>  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  S  D  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  G  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T </second_frame>
            <third_frame>   R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  A  I  *  R  N  L  K  R  R  I  K  S  H  R  L  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  I  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  R  F  Y  M  E  S  W  R  K  R  Y  T  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84361" stop="85008"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="85019" PGL_stop="85826"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85019" e_stop="85826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="85019" e_stop="85826" e_length="808"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85019" stop="85826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345812" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  I  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  W  R  G  L  A  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  M  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  G  E  V  W  H  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  F  G  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  Y  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85021" stop="85824"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="88176" PGL_stop="89577"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88176" e_stop="88497"/>
            <exon e_start="88983" e_stop="89203"/>
            <exon e_start="89298" e_stop="89577"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.994"/>
          <exon-intron don_prob="0.996" acc_prob="0.823" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="88176" e_stop="88497" e_length="322"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="88498" i_stop="88982" i_length="485"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88983" e_stop="89203" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.823">
            <gDNA_intron_boundary i_start="89204" i_stop="89297" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="89298" e_stop="89577" e_length="280"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88176" stop="88497"/>
              <exon start="88983" stop="89203"/>
              <exon start="89298" stop="89577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345364" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTACTTTAGAGAAGCCTTTTTATTAACTTCATATGGAGTACTTATCACTTGTGGAAGTAGAGATGATAGCAACAATTTGTGTTGCAATTTTGTTAGTAATATACACATGGAAAGTGTTGAATTGGGCATGGTTTAGGCCAAAGAAATTTGAGAAATACTTAAGAAAAAGTGGTCTTAATGGAAATCCATACAAATTACTCTATGGAGATTTGAAGGAACTCACAAATAAACTCAATGAAGCCAAGTCTAAGCCCATCAGTTTCTCTGGTGATGTACCTCAAAGGCTCATCCCTTTTTTCTGTGACTCCATCAACAAAAATG : GTAAAAATTCTTTTGCCTGGCTAGGTCCCAAGCCTATAGTATTCATCACAGAACCTTCACTTATAAAGAAAATTTTTGAAAAACATTATGTATATCACAAGAATAAGCATTCTAATCCATTCGCGAAGTTATTGGTTCAAGGTCTCGTTACCCTTGAGGAACAGAAATGGGCTAAGCATAGAAAAATCATCAATCCCGCCTTCCATTTTGAGAAACTAAAG : CATATGGTTCCAGCATTTTATCAGAGTTGTAGCGAAATGCTAAGGAAATGGGAGGAGGCTGTTCCAAAGGAAACATCAGCCGAGCTCGATGTATGGCCACATTTTCAACTAATGACCGGTGATGTCATTTCTCGAACTGCATTTGGGAGTAGCTATGAAGAAGGGAGAATAATATTTGAACTTCAAAAAGAACAAGCTGAGTATGTAATGGAACAAATTTTTTCGATTTATATACCAGGGTCGAGGTACGTACAATATTAAACTATTTGATCAAATTTCT</gDNA_template>
            <first_frame> S  T  L  E  K  P  F  Y  *  L  H  M  E  Y  L  S  L  V  E  V  E  M  I  A  T  I  C  V  A  I  L  L  V  I  Y  T  W  K  V  L  N  W  A  W  F  R  P  K  K  F  E  K  Y  L  R  K  S  G  L  N  G  N  P  Y  K  L  L  Y  G  D  L  K  E  L  T  N  K  L  N  E  A  K  S  K  P  I  S  F  S  G  D  V  P  Q  R  L  I  P  F  F  C  D  S  I  N  K  N   : G  K  N  S  F  A  W  L  G  P  K  P  I  V  F  I  T  E  P  S  L  I  K  K  I  F  E  K  H  Y  V  Y  H  K  N  K  H  S  N  P  F  A  K  L  L  V  Q  G  L  V  T  L  E  E  Q  K  W  A  K  H  R  K  I  I  N  P  A  F  H  F  E  K  L  K  :  H  M  V  P  A  F  Y  Q  S  C  S  E  M  L  R  K  W  E  E  A  V  P  K  E  T  S  A  E  L  D  V  W  P  H  F  Q  L  M  T  G  D  V  I  S  R  T  A  F  G  S  S  Y  E  E  G  R  I  I  F  E  L  Q  K  E  Q  A  E  Y  V  M  E  Q  I  F  S  I  Y  I  P  G  S  R  Y  V  Q  Y  *  T  I  *  S  N  F  </first_frame>
            <second_frame>  V  L  *  R  S  L  F  I  N  F  I  W  S  T  Y  H  L  W  K  *  R  *  *  Q  Q  F  V  L  Q  F  C  *  *  Y  T  H  G  K  C  *  I  G  H  G  L  G  Q  R  N  L  R  N  T  *  E  K  V  V  L  M  E  I  H  T  N  Y  S  M  E  I  *  R  N  S  Q  I  N  S  M  K  P  S  L  S  P  S  V  S  L  V  M  Y  L  K  G  S  S  L  F  S  V  T  P  S  T  K  M  :  V  K  I  L  L  P  G  *  V  P  S  L  *  Y  S  S  Q  N  L  H  L  *  R  K  F  L  K  N  I  M  Y  I  T  R  I  S  I  L  I  H  S  R  S  Y  W  F  K  V  S  L  P  L  R  N  R  N  G  L  S  I  E  K  S  S  I  P  P  S  I  L  R  N  *  S :   I  W  F  Q  H  F  I  R  V  V  A  K  C  *  G  N  G  R  R  L  F  Q  R  K  H  Q  P  S  S  M  Y  G  H  I  F  N  *  *  P  V  M  S  F  L  E  L  H  L  G  V  A  M  K  K  G  E  *  Y  L  N  F  K  K  N  K  L  S  M  *  W  N  K  F  F  R  F  I  Y  Q  G  R  G  T  Y  N  I  K  L  F  D  Q  I  S </second_frame>
            <third_frame>   Y  F  R  E  A  F  L  L  T  S  Y  G  V  L  I  T  C  G  S  R  D  D  S  N  N  L  C  C  N  F  V  S  N  I  H  M  E  S  V  E  L  G  M  V  *  A  K  E  I  *  E  I  L  K  K  K  W  S  *  W  K  S  I  Q  I  T  L  W  R  F  E  G  T  H  K  *  T  Q  *  S  Q  V  *  A  H  Q  F  L  W  *  C  T  S  K  A  H  P  F  F  L  *  L  H  Q  Q  K  W :   *  K  F  F  C  L  A  R  S  Q  A  Y  S  I  H  H  R  T  F  T  Y  K  E  N  F  *  K  T  L  C  I  S  Q  E  *  A  F  *  S  I  R  E  V  I  G  S  R  S  R  Y  P  *  G  T  E  M  G  *  A  *  K  N  H  Q  S  R  L  P  F  *  E  T  K   : A  Y  G  S  S  I  L  S  E  L  *  R  N  A  K  E  M  G  G  G  C  S  K  G  N  I  S  R  A  R  C  M  A  T  F  S  T  N  D  R  *  C  H  F  S  N  C  I  W  E  *  L  *  R  R  E  N  N  I  *  T  S  K  R  T  S  *  V  C  N  G  T  N  F  F  D  L  Y  T  R  V  E  V  R  T  I  L  N  Y  L  I  K  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88203" stop="88497"/>
                    <exon start="88983" stop="89203"/>
                    <exon start="89298" stop="89558"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHMEYLSLVEVEMIATICVAILLVIYTWKVLNWAWFRPKKFEKYLRKSGLNGNPYKLLYGDLKELTNKLNEAKSKPISFSGDVPQRLIPFFCDSINKNGKNSFAWLGPKPIVFITEPSLIKKIFEKHYVYHKNKHSNPFAKLLVQGLVTLEEQKWAKHRKIINPAFHFEKLKHMVPAFYQSCSEMLRKWEEAVPKETSAELDVWPHFQLMTGDVISRTAFGSSYEEGRIIFELQKEQAEYVMEQIFSIYIPGSRYVQY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="90000" PGL_stop="91271"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90000" e_stop="90016"/>
            <exon e_start="90096" e_stop="90455"/>
            <exon e_start="91262" e_stop="91271"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.925" acc_prob="0.601" e_score="0.989"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90000" e_stop="90016" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90017" i_stop="90095" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="90096" e_stop="90455" e_length="360"/>
          </exon>
          <intron i_serial="2" don_prob="0.925" acc_prob="0.601">
            <gDNA_intron_boundary i_start="90456" i_stop="91261" i_length="806"/>
          </intron>
          <exon e_serial="3" e_score="0.600">
            <gDNA_exon_boundary e_start="91262" e_stop="91271" e_length="10"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90000" stop="90016"/>
              <exon start="90096" stop="90455"/>
              <exon start="91262" stop="91271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U347095" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAGTCGCCTCAAAATT : GTGACTATGATCTTGTACGAGACGTTAAGGCTGTTCCCCCCCGCACTGTTATATGGTAGAACAAACAAAGATGAAGTCAAATTGGGTGAGCTGAGTCTGCCAGCTGAAGTACTACTCATTATACCCGCAATCCTAGTACATTATAACAAGGAATTATGGGGTGAAGACGCGAAGGAATTCAAACCAGATCGATTCAGTGAAGGAGTGTCAAAGGCAACAAACGGACAAGTCTCGTTTATTCCATTTGGTTGGGGACCCCGAATTTGCATCGGACAAAACTTTGTAATGACGGAAGCAAAGATGACAATAGCAATGATCCTACAGAAGTTCTCGTTTGAACTCTCTCCATCATATACACAT : GAAGGGAAAA</gDNA_template>
            <first_frame> *  V  A  S  K  L :   *  L  *  S  C  T  R  R  *  G  C  S  P  P  H  C  Y  M  V  E  Q  T  K  M  K  S  N  W  V  S  *  V  C  Q  L  K  Y  Y  S  L  Y  P  Q  S  *  Y  I  I  T  R  N  Y  G  V  K  T  R  R  N  S  N  Q  I  D  S  V  K  E  C  Q  R  Q  Q  T  D  K  S  R  L  F  H  L  V  G  D  P  E  F  A  S  D  K  T  L  *  *  R  K  Q  R  *  Q  *  Q  *  S  Y  R  S  S  R  L  N  S  L  H  H  I  H  M :   K  G  K </first_frame>
            <second_frame>  K  S  P  Q  N   : C  D  Y  D  L  V  R  D  V  K  A  V  P  P  R  T  V  I  W  *  N  K  Q  R  *  S  Q  I  G  *  A  E  S  A  S  *  S  T  T  H  Y  T  R  N  P  S  T  L  *  Q  G  I  M  G  *  R  R  E  G  I  Q  T  R  S  I  Q  *  R  S  V  K  G  N  K  R  T  S  L  V  Y  S  I  W  L  G  T  P  N  L  H  R  T  K  L  C  N  D  G  S  K  D  D  N  S  N  D  P  T  E  V  L  V  *  T  L  S  I  I  Y  T   : *  R  E   </second_frame>
            <third_frame>   S  R  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  A  L  L  Y  G  R  T  N  K  D  E  V  K  L  G  E  L  S  L  P  A  E  V  L  L  I  I  P  A  I  L  V  H  Y  N  K  E  L  W  G  E  D  A  K  E  F  K  P  D  R  F  S  E  G  V  S  K  A  T  N  G  Q  V  S  F  I  P  F  G  W  G  P  R  I  C  I  G  Q  N  F  V  M  T  E  A  K  M  T  I  A  M  I  L  Q  K  F  S  F  E  L  S  P  S  Y  T  H  :  E  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90002" stop="90016"/>
                    <exon start="90096" stop="90455"/>
                    <exon start="91262" stop="91270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRLKIVTMILYETLRLFPPALLYGRTNKDEVKLGELSLPAEVLLIIPAILVHYNKELWGEDAKEFKPDRFSEGVSKATNGQVSFIPFGWGPRICIGQNFVMTEAKMTIAMILQKFSFELSPSYTHEGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="91161" PGL_stop="90739"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91161" e_stop="90739"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="91161" e_stop="90739" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91161" stop="90739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338087" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTTTAGAGAGTTTTTCAGCAGCCAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCACATCGAAGGGTTTTCCACGTAAATCTTGGTG</gDNA_template>
            <first_frame> I  F  *  R  V  F  Q  Q  P  K  E  R  K  K  R  E  I  R  S  Q  K  S  S  H  N  N  Q  L  Q  I  A  I  P  A  S  F  L  V  R  L  S  *  F  L  D  S  I  L  S  S  S  Q  S  L  I  R  N  *  Q  S  W  I  W  W  S  A  A  S  V  L  L  S  *  T  V  A  A  K  L  V  I  L  L  L  *  F  S  R  F  G  A  I  L  F  C  C  C  S  L  F  G  T  L  F  C  G  Q  F  W  R  T  I  L  *  L  L  V  I  I  V  E  L  L  V  P  W  F  F  T  L  H  I  E  G  F  S  T  *  I  L  V </first_frame>
            <second_frame>  F  F  R  E  F  F  S  S  Q  K  R  E  K  R  E  K  F  A  V  K  N  P  A  I  T  T  N  F  K  L  R  F  P  L  R  F  L  S  D  *  A  D  F  W  T  A  Y  Y  L  H  L  N  L  *  L  G  T  D  R  V  G  F  G  G  L  Q  L  Q  F  C  C  R  E  Q  *  L  R  N  W  *  F  C  S  F  N  S  L  D  L  V  Q  S  Y  F  V  V  A  R  C  L  A  L  C  F  V  A  N  F  G  E  Q  Y  C  N  S  W  *  L  *  W  S  F  W  S  R  G  F  L  L  F  T  S  K  G  F  P  R  K  S  W   </second_frame>
            <third_frame>   F  L  E  S  F  S  A  A  K  R  E  K  K  E  R  N  S  Q  S  K  I  Q  P  *  Q  P  T  S  N  C  D  S  R  F  V  S  C  P  I  E  L  I  F  G  Q  H  I  I  F  I  S  I  F  D  *  E  L  T  E  L  D  L  V  V  C  S  F  S  F  A  V  V  N  S  S  C  E  I  G  D  F  A  P  L  I  L  *  I  W  C  N  L  I  L  L  L  L  V  V  W  H  F  V  L  W  P  I  L  E  N  N  I  V  T  L  G  D  Y  S  G  A  F  G  P  V  V  F  Y  S  S  H  R  R  V  F  H  V  N  L  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0166A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="106566" PGL_stop="107819"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106566" e_stop="106872"/>
            <exon e_start="107156" e_stop="107376"/>
            <exon e_start="107779" e_stop="107819"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.578" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="106566" e_stop="106872" e_length="307"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.999">
            <gDNA_intron_boundary i_start="106873" i_stop="107155" i_length="283"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107156" e_stop="107376" e_length="221"/>
          </exon>
          <intron i_serial="2" don_prob="0.865" acc_prob="0.578">
            <gDNA_intron_boundary i_start="107377" i_stop="107778" i_length="402"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107779" e_stop="107819" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106566" stop="106872"/>
              <exon start="107156" stop="107376"/>
              <exon start="107779" stop="107819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339829" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACAATAAACAGTTTGAAAAATAAAATTTCATGGAGATTTTGTATAACACAATTATAGCAATAATTTGTGTTGCAATATTGTTGGTATATACATGGAGAGTGTTGAATTGGGCATGGTTTAGGCCAAAAAAATTGGAGAATTTCTTAAGGCAAAGAGGTCTAAAAGGAAATCCATATAAGTTACTCTATGGAGATTTGAATGAACTCACAAAAAGTATAGTTGAAGCTAAGTCTAAGTCAATCAATATCTCTGATGATATAACTCAAAGGCTTATCCCTTTTTTCCTTGACTCCATCAACAAAAATG : GTAAAAGTTCTTTCATGTGGCTAGGCCCATATCCAACAGTGTTGATCACAAATCCTGAACATGTAAAAGAGATTTTGACAAAGAATTATGTGTACCTAAAGCAAACTCATCCAAATCCATTTGCAAAGTTATTGGCTCAAGGTCTTGTGTTGGTTGAGGAAGACAAATGGGCAAAACACAGAAAAATAATCAATCCTGCTTTCCATGTTGAGAAGTTAAAG : CATATGTTGCCAGCATTTTATATGAGTTGTAGTGAAATGAT</gDNA_template>
            <first_frame> N  N  K  Q  F  E  K  *  N  F  M  E  I  L  Y  N  T  I  I  A  I  I  C  V  A  I  L  L  V  Y  T  W  R  V  L  N  W  A  W  F  R  P  K  K  L  E  N  F  L  R  Q  R  G  L  K  G  N  P  Y  K  L  L  Y  G  D  L  N  E  L  T  K  S  I  V  E  A  K  S  K  S  I  N  I  S  D  D  I  T  Q  R  L  I  P  F  F  L  D  S  I  N  K  N   : G  K  S  S  F  M  W  L  G  P  Y  P  T  V  L  I  T  N  P  E  H  V  K  E  I  L  T  K  N  Y  V  Y  L  K  Q  T  H  P  N  P  F  A  K  L  L  A  Q  G  L  V  L  V  E  E  D  K  W  A  K  H  R  K  I  I  N  P  A  F  H  V  E  K  L  K  :  H  M  L  P  A  F  Y  M  S  C  S  E  M   </first_frame>
            <second_frame>  T  I  N  S  L  K  N  K  I  S  W  R  F  C  I  T  Q  L  *  Q  *  F  V  L  Q  Y  C  W  Y  I  H  G  E  C  *  I  G  H  G  L  G  Q  K  N  W  R  I  S  *  G  K  E  V  *  K  E  I  H  I  S  Y  S  M  E  I  *  M  N  S  Q  K  V  *  L  K  L  S  L  S  Q  S  I  S  L  M  I  *  L  K  G  L  S  L  F  S  L  T  P  S  T  K  M  :  V  K  V  L  S  C  G  *  A  H  I  Q  Q  C  *  S  Q  I  L  N  M  *  K  R  F  *  Q  R  I  M  C  T  *  S  K  L  I  Q  I  H  L  Q  S  Y  W  L  K  V  L  C  W  L  R  K  T  N  G  Q  N  T  E  K  *  S  I  L  L  S  M  L  R  S  *  S :   I  C  C  Q  H  F  I  *  V  V  V  K  *  </second_frame>
            <third_frame>   Q  *  T  V  *  K  I  K  F  H  G  D  F  V  *  H  N  Y  S  N  N  L  C  C  N  I  V  G  I  Y  M  E  S  V  E  L  G  M  V  *  A  K  K  I  G  E  F  L  K  A  K  R  S  K  R  K  S  I  *  V  T  L  W  R  F  E  *  T  H  K  K  Y  S  *  S  *  V  *  V  N  Q  Y  L  *  *  Y  N  S  K  A  Y  P  F  F  P  *  L  H  Q  Q  K  W :   *  K  F  F  H  V  A  R  P  I  S  N  S  V  D  H  K  S  *  T  C  K  R  D  F  D  K  E  L  C  V  P  K  A  N  S  S  K  S  I  C  K  V  I  G  S  R  S  C  V  G  *  G  R  Q  M  G  K  T  Q  K  N  N  Q  S  C  F  P  C  *  E  V  K   : A  Y  V  A  S  I  L  Y  E  L  *  *  N  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106590" stop="106872"/>
                    <exon start="107156" stop="107376"/>
                    <exon start="107779" stop="107817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFMEILYNTIIAIICVAILLVYTWRVLNWAWFRPKKLENFLRQRGLKGNPYKLLYGDLNELTKSIVEAKSKSINISDDITQRLIPFFLDSINKNGKSSFMWLGPYPTVLITNPEHVKEILTKNYVYLKQTHPNPFAKLLAQGLVLVEEDKWAKHRKIINPAFHVEKLKHMLPAFYMSCSEM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="108222" PGL_stop="108936"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108222" e_stop="108483"/>
            <exon e_start="108746" e_stop="108936"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.318" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108222" e_stop="108483" e_length="262"/>
          </exon>
          <intron i_serial="1" don_prob="0.318" acc_prob="0.990">
            <gDNA_intron_boundary i_start="108484" i_stop="108745" i_length="262"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108746" e_stop="108936" e_length="191"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108222" stop="108483"/>
              <exon start="108746" stop="108936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337867" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTATTAGGCATATTACTTGAATCCAATATGAAAGAAATTGAACAACACGGAAACAAAGATTTCGGATTGACAACAACAGAAGTGATTGAAGAATGCAAGTTATTCTATTTTGCTGGACAGGAGACCACTTCAGTGTTGCTCGTGTGGACGATGGTTTTGCTATGCCTACATCCAGAGTGGCAAGTACGGGCCAGAGAGGAGGTTTTACAGGTCTTCGGAAATGAAAAACCAGATTTGGAAGGACTAAGTCACCTCAAAATT : GTGACAATGATCTTATACGAGACATTAAGGCTATTCCCCCCATTACCGGTATTTAGTAGAAGGAACAAAGAAGAAGTCAAATTAGGGGAGCTGCAGCTACCAGCTGAAGTGATACTTATTATACCTGCAATCTTTATTCATTATGACAAGGAAATATGGGGCGAAGATGCGAAGGAATTCAAACCAGAAAG</gDNA_template>
            <first_frame> F  I  R  H  I  T  *  I  Q  Y  E  R  N  *  T  T  R  K  Q  R  F  R  I  D  N  N  R  S  D  *  R  M  Q  V  I  L  F  C  W  T  G  D  H  F  S  V  A  R  V  D  D  G  F  A  M  P  T  S  R  V  A  S  T  G  Q  R  G  G  F  T  G  L  R  K  *  K  T  R  F  G  R  T  K  S  P  Q  N   : C  D  N  D  L  I  R  D  I  K  A  I  P  P  I  T  G  I  *  *  K  E  Q  R  R  S  Q  I  R  G  A  A  A  T  S  *  S  D  T  Y  Y  T  C  N  L  Y  S  L  *  Q  G  N  M  G  R  R  C  E  G  I  Q  T  R  K </first_frame>
            <second_frame>  L  L  G  I  L  L  E  S  N  M  K  E  I  E  Q  H  G  N  K  D  F  G  L  T  T  T  E  V  I  E  E  C  K  L  F  Y  F  A  G  Q  E  T  T  S  V  L  L  V  W  T  M  V  L  L  C  L  H  P  E  W  Q  V  R  A  R  E  E  V  L  Q  V  F  G  N  E  K  P  D  L  E  G  L  S  H  L  K  I  :  V  T  M  I  L  Y  E  T  L  R  L  F  P  P  L  P  V  F  S  R  R  N  K  E  E  V  K  L  G  E  L  Q  L  P  A  E  V  I  L  I  I  P  A  I  F  I  H  Y  D  K  E  I  W  G  E  D  A  K  E  F  K  P  E   </second_frame>
            <third_frame>   Y  *  A  Y  Y  L  N  P  I  *  K  K  L  N  N  T  E  T  K  I  S  D  *  Q  Q  Q  K  *  L  K  N  A  S  Y  S  I  L  L  D  R  R  P  L  Q  C  C  S  C  G  R  W  F  C  Y  A  Y  I  Q  S  G  K  Y  G  P  E  R  R  F  Y  R  S  S  E  M  K  N  Q  I  W  K  D  *  V  T  S  K  L :   *  Q  *  S  Y  T  R  H  *  G  Y  S  P  H  Y  R  Y  L  V  E  G  T  K  K  K  S  N  *  G  S  C  S  Y  Q  L  K  *  Y  L  L  Y  L  Q  S  L  F  I  M  T  R  K  Y  G  A  K  M  R  R  N  S  N  Q  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0166A09.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108223" stop="108483"/>
                    <exon start="108746" stop="108934"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLGILLESNMKEIEQHGNKDFGLTTTEVIEECKLFYFAGQETTSVLLVWTMVLLCLHPEWQVRAREEVLQVFGNEKPDLEGLSHLKIVTMILYETLRLFPPLPVFSRRNKEEVKLGELQLPAEVILIIPAIFIHYDKEIWGEDAKEFKPE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 41 chains have been computed
$ 
$ memory statistics:
$ 139784 bytes spliced alignments in total
$ 15 spliced alignments have been stored
$ 9318 bytes was the average size of a spliced alignment
$ 21352 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1525 bytes was the average size of a predicted gene location
$ 4 megabytes was the average size of the backtrace matrix
$ 53 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-17 02:43:23
-->
