<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 15:21:31"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295989" ref_strand="+" ref_description="SGN-E295989 [cLET-27-E8]">
      <seq>aaaatggcttctctatcggtctctgtaaaacacactcttccttctctgctccaatatgctcaaaccccaaaaaaaacccatctcccaaaaccttaccattgtctccagatcatcacaatcccatttttatggccttgaagtccttcattcaccttctttttcaaccccatcttcttcaagaacttcaattgttgctaaggtgaataaaggttcagcgcctccaccattcacattgaaagatcaagatggaaaaaatgtgagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="871" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="571" g_stop="374" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="373" i_stop="303" i_length="71">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="302" g_stop="239" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="263" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E295989" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="571" e_stop="374"/>
          <exon e_start="302" e_stop="239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGCTTCTCTATCGGTCTCTGTAAAACACACTCTTCCTTCTCTGCTCCAATATGCTCAAACCCCAAAAAA-ACCCATCTCCCAAAACCTTACCATTGTCTCCAGATCATCACAATCCCATTTTTATGGCCTTGAAGTCCTTCATTCACCTTCTTTTTCAACCCCATCTTCTTCAAGAACTTCAATTGTTGCTAAGGTAAATTGCATTGCATTTGTCTTGCATCTTCCGTTTTTCATGCGGATAAAATTTTGTTTTGATATTTGTAGGTGAATAAAGGTTCAGCGCCTCCACCATTCACATTGAAAGATCAAGATGGAAAAAATGTGAGTC</genome_strand>
        <mrna_strand>AAAATGGCTTCTCTATCGGTCTCTGTAAAACACACTCTTCCTTCTCTGCTCCAATATGCTCAAACCCCAAAAAAAACCCATCTCCCAAAACCTTACCATTGTCTCCAGATCATCACAATCCCATTTTTATGGCCTTGAAGTCCTTCATTCACCTTCTTTTTCAACCCCATCTTCTTCAAGAACTTCAATTGTTGCTAAG.......................................................................GTGAATAAAGGTTCAGCGCCTCCACCATTCACATTGAAAGATCAAGATGGAAAAAATGTGAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291422" ref_strand="+" ref_description="SGN-E291422 [cLET-2-P24]">
      <seq>aaatggcttctctatcgggctctgtaaaacacactcttccttctctgctccaatatgctcaaaccccaaaaaaacccatctcccaaaaccttaccattgtctccagatcatcacaatcccatttttatggccttgaagtccttcattcaccttctttttcaaccccatcttcttcaagaacttcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="870" stop="83"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="570" g_stop="383" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E291422" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>188</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="570" e_stop="383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGCTTCTCTATCGGTCTCTGTAAAACACACTCTTCCTTCTCTGCTCCAATATGCTCAAACCCCAAAAAAACCCATCTCCCAAAACCTTACCATTGTCTCCAGATCATCACAATCCCATTTTTATGGCCTTGAAGTCCTTCATTCACCTTCTTTTTCAACCCCATCTTCTTCAAGAACTTCAATT</genome_strand>
        <mrna_strand>AAATGGCTTCTCTATCGGGCTCTGTAAAACACACTCTTCCTTCTCTGCTCCAATATGCTCAAACCCCAAAAAAACCCATCTCCCAAAACCTTACCATTGTCTCCAGATCATCACAATCCCATTTTTATGGCCTTGAAGTCCTTCATTCACCTTCTTTTTCAACCCCATCTTCTTCAAGAACTTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391540" ref_strand="+" ref_description="SGN-E391540 [TUS-16-I1]">
      <seq>acgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="3664" stop="2401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3364" g_stop="2722" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E391540" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3364" e_stop="2722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGGATCTTGAATTCAAATTTGTCATATAGTGTGGACAGATAAATGGTTGGACAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGAACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATAAAATACGGTTTGTGCCTTGGGGCATAAAAGTTTATTGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTAGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATAAAAATTCTTGAAATAATTGAGGTGTTTGAAGCATATAAGAGTTTGAATGAAACTTTTTCAATAAAGTTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAATGGGTGC-AAAGAATGACGCTAATTGTCCTTGTATTTTTATGAAAAAAGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAACAATGCACATACACTG--AAATTTTGATGCAATTTTATATGGATAAATCGCATTCA</genome_strand>
        <mrna_strand>ACGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAA-GGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATG-AAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267707" ref_strand="+" ref_description="SGN-E267707 [cLEI-12-K2]">
      <seq>ttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="3615" stop="2435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3315" g_stop="2735" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E267707" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3315" e_stop="2735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGACAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGAACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATAAAATACGGTTTGTGCCTTGGGGCATAAAAGTTTATTGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTAGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATAAAAATTCTTGAAATAATTGAGGTGTTTGAAGCATATAAGAGTTTGAATGAAACTTTTTCAATAAAGTTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAATGGGTGC-AAAGAATGACGCTAATTGTCCTTGTATTTTTATGAAAAAAGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAACAATGCACATACACTG--AAATTTTGATGCAATTTTATATGGA</genome_strand>
        <mrna_strand>TTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAA-GGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATG-AAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205808" ref_strand="+" ref_description="SGN-E205808 [cLEC-20-M21]">
      <seq>cgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="3663" stop="2509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3363" g_stop="2809" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E205808" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3363" e_stop="2809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGATCTTGAATTCAAATTTGTCATATAGTGTGGACAGATAAATGGTTGGACAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGAACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATAAAATACGGTTTGTGCCTTGGGGCATAAAAGTTTATTGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTAGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATAAAAATTCTTGAAATAATTGAGGTGTTTGAAGCATATAAGAGTTTGAATGAAACTTTTTCAATAAAGTTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAATGGGTGC-AAAGAATGACGCTAATTGTCCTTGTATTTTTATGAAAAAAGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAG</genome_strand>
        <mrna_strand>CGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAA-GGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATG-AAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202657" ref_strand="+" ref_description="SGN-E202657 [cLEC-19-H1]">
      <seq>gatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttaaaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacgggttgcttcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgatttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="3659" stop="2606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3359" g_stop="2906" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E202657" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3359" e_stop="2906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTTGAATTCAAATTTGTCATATAGTGTGGACAGATAAATGGTTGGACAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGAACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATAAAATACGGTTTGTGCCTTGGGGCATAAAAGTTTATTGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTAGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATAAAAATTCTTGAAATAATTGAGGTGTTTGAAGCATATAAGAGTTTGAATGAAACTTTTTCAATAAAGTTTCAAGAATCCTTATATGGATTGAAAT</genome_strand>
        <mrna_strand>GATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAAAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGGTTGCTTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGATTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273497" ref_strand="+" ref_description="SGN-E273497 [cLEN-3-J16]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaatttatatcattgagcgctacctcatatcaaagataccgtcgacggttatttgatatcgattccaacaagacataacttatcgagatctcttcaatttttttcattatttcaggtacctgaacctttttcaagattttatgaagtgttatgtcaatgtgctcctttatagcacttgcctcattatcatgaccatattgatcatttgctccttccttctttaaggaattttatatttggaatcaattggtctattacgctttcggcgtatcataaactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="2726" stop="3945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3039" g_stop="3642" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="661" r_length="607" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E273497" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3039" e_stop="3642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACATGCATTCAAGTTTTTCATATGTTGCTAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCAATAAACTTTTATGCCCCAAGGCACAAACCGTATTTTATATCTTACGGTTATACTATCGCATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTTCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGTCCAACCATTTATCTGTCCACACTATATGACAAATTTGAATTCAAGATCCTCGTCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACTGTCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATCGAGATCTCTTC-A--TTTTTCATTATTTTAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTATTATGTCAATGTGCTCCCTTATAGCACTTGCCTCATTATCATGAACATATTGATCATTTGCTCCTTCCTTCTTCAAGGAATTTTATATTTGGAATCGATTGGTCTATTACGCTTTCGGCGTATCATAGACT</genome_strand>
        <mrna_strand>CATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACCGTCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATCGAGATCTCTTCAATTTTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCCTTTATAGCACTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTTAAGGAATTTTATATTTGGAATCAATTGGTCTATTACGCTTTCGGCGTATCATAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542836" ref_strand="+" ref_description="SGN-E542836 [TUS-64-F12](-)">
      <seq>aaaatgatgactaagaaaatcattatatttttgatgaaaatgtctgaaaattcatcatattgaatttgctccattccttgaaaagaatgtggtagcaacatgtgataactctgaaatccgcctgttgacttgctccattcaatcatatgaatgtggtagcagtgaatgattagtctgaaagatgacaaataattaatgatatgaataaaggcgtggaaggacagaattataatagtcatcattgtggtaatgataaaaggaataacaatatgagttcttcaaatagtccttcaaaatgtgaagacaatttttattatgaaaatggtatgaaaagtcattagacttgtgaatgttgtcaacccaataacttgacaagtttataaatcctctatcatgatataagaagataaagtgatggtacactttatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagtcatgacaatgtgcttataatgcaaatttataaagtacatatgaataattagtccaatctttgaagagaatgtgacttgtaatgagtatcgtgaatgctcgaccattctataagagaatgggtccagatgtgataaaatcattatgggttggatatatgtcacaactcacctctatagaaggtttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="6062" stop="4791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5762" g_stop="5087" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="676" r_length="676" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E542836" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5762" e_stop="5087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGATGACTAAGAAAAATAATATATTTTTGATG-AAATATCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGCAACATGTGATAACTCTGAAATCCGTCTGTTGACTTGCTCCATTCAATCATATGAATTTGATAGTAGTGAATGATTAGTCTGAAAGATGACAAATAATTAATGATATGAATAAGGGCGTGAAGAGACAGCATTATAATAGTCATCATTGTGGTAATGATAAAAAGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGTTAATTTTTATTATCAAAATGGTATGAAAGGTCATTAGACTTGTGAATGTTGTCAACCCAATGATTTGACAAGTTTATAAATCCTCTATCATGATACAGGAAGATAAAGTGATGGTACACTTAATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGAAGAATTTTAAAGCCATGTCAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGTCACATTCCTTGAAGAAAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCTAGATGTGATAAAATCATTATGGGTTGGATAAATTCCACAACTCACCTCTATGAAAGGTTTGAGAAAAAATGAT</genome_strand>
        <mrna_strand>AAAATGATGACTAAGAAAATCATTATATTTTTGATGAAAATGTCTGAAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGCAACATGTGATAACTCTGAAATCCGCCTGTTGACTTGCTCCATTCAATCATATGAATGTGGTAGCAGTGAATGATTAGTCTGAAAGATGACAAATAATTAATGATATGAATAAAGGCGTGGAAGGACAGAATTATAATAGTCATCATTGTGGTAATGATAAAAGGAATAACAATATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGACAATTTTTATTATGAAAATGGTATGAAAAGTCATTAGACTTGTGAATGTTGTCAACCCAATAACTTGACAAGTTTATAAATCCTCTATCATGATATAAGAAGATAAAGTGATGGTACACTTTATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGTCATGACAATGTGCTTATAATGCAAATTTATAAAGTACATATGAATAATTAGTC-CAATCTTTGAAGAGAATGTGACTTGTAATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATGTCACAACTCACCTCTATAGAAGGTTTGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204533" ref_strand="-" ref_description="SGN-E204533 [cLEC-24-G13]">
      <seq>aatttttattatgaaaatggtatgaaaagtcattagacttgtgaatgttgtcaacccaataacttgacaagtttataaatcctctatcatgatataagaagataaagtgatggtacactttatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagtcatgacaatgtgcttataatgcaaatttataaagtacatatgaataattagtccaatctttgaagagaatgtgacttgtaatgagtatcgtgaatgctcgaccattctataagagaatgggtccagatgtgataaaatcattatgggttggatatatgtcacaactcacctctatagaaggttttgaaaaaaaaaaaaaaaaaactcggactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="5758" stop="4784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5458" g_stop="5104" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="361" polyA_stop="379"/>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E204533" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204533" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="5458" e_stop="5104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTATTATCAAAATGGTATGAAAGGTCATTAGACTTGTGAATGTTGTCAACCCAATGATTTGACAAGTTTATAAATCCTCTATCATGATACAGGAAGATAAAGTGATGGTACACTTAATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGAAGAATTTTAAAGCCATGTCAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGTCACATTCCTTGAAGAAAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCTAGATGTGATAAAATCATTATGGGTTGGATAAATTCCACAACTCACCTCTATGAAAG</genome_strand>
        <mrna_strand>AATTTTTATTATGAAAATGGTATGAAAAGTCATTAGACTTGTGAATGTTGTCAACCCAATAACTTGACAAGTTTATAAATCCTCTATCATGATATAAGAAGATAAAGTGATGGTACACTTTATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGTCATGACAATGTGCTTATAATGCAAATTTATAAAGTACATATGAATAATTAGTC-CAATCTTTGAAGAGAATGTGACTTGTAATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATTATGGGTTGGATATATGTCACAACTCACCTCTATAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354965" ref_strand="+" ref_description="SGN-E354965 [cTOS-19-M24]">
      <seq>gataagacgatagattcaagttctatctcaccaaaagggtaagacatcaattagagttttgatacaccgtgattgggttcaagttccatagaattatggcgtaacacgccttacatgggtaagacattgagtttgatccaatgcataaaatgatgactaagaaaaataatatatttttgatgaaatgtctttaaattcatcatattgaatttgctccatttcttgaaaagaatatggtagcaacatgtgataactctgaaatccacctgttgacttgctccattcaatcatatgaatgtggtagcagtgaatgattagtttgaaagatgacaaataattaatgatatagaataagggagtggagggaaagaattataatagtcatcattgtggtaatgataaaaggaagaacactatgagttcttcaaatagtccttcaaaatgtgaaggcaacttttattatcaaaatggtatgaaaggttattagacttgtcaatgttgtcaaccccataatttgacaagtttataaatcctctatcatgacacaagaagataaagtgatggtacacttcatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagccatgacaatgtgcttataatgcaaatttatgaagtacatataaataattagttcattccttgaagagaatgtgacttgtgatgagtatcgtgaatgctcgaccattctataaaagaatgggtccaaatgtgataaaatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="6220" stop="4842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5920" g_stop="5142" g_length="779"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="767" r_length="767" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E354965" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5920" e_stop="5142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGACGATAGATTCAAGTTCTATCGCAGAAAAAGGTTAAGACATCAATTAGAGTTTTGATGCACCGTGATTGGGTTCAAGTCCCATAGAATTATGGCGTAACATGTCTTATATGGGTAAGACATTGAGTTTGAGCCAATGCACCATAGCGATGATAAAAAGATGACTAAGAAAAATAATATATTTTTGATGAAATATCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGCAACATGTGATAACTCTGAAATCCGTCTGTTGACTTGCTCCATTCAATCATATGAATTTGATAGTAGTGAATGATTAGTCTGAAAGATGACAAATAATTAATGATAT-GAATAAGGGCGTGAAGAGACAGCATTATAATAGTCATCATTGTGGTAATGATAAAAAGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGTTAATTTTTATTATCAAAATGGTATGAAAGGTCATTAGACTTGTGAATGTTGTCAACCCAATGATTTGACAAGTTTATAAATCCTCTATCATGATACAGGAAGATAAAGTGATGGTACACTTAATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGAAGAATTTTAAAGCCATGTCAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGTCACATTCCTTGAAGAAAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCTAGATGTGATAAAATCATT</genome_strand>
        <mrna_strand>GATAAGACGATAGATTCAAGTTCTATCTCACCAAAAGGGTAAGACATCAATTAGAGTTTTGATACACCGTGATTGGGTTCAAGTTCCATAGAATTATGGCGTAACACGCCTTACATGGGTAAGACATTGAGTTT--G---AT-C-CAAT-GC-AT-A--AAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTTAAATTCATCATATTGAATTTGCTCCATTTCTTGAAAAGAATATGGTAGCAACATGTGATAACTCTGAAATCCACCTGTTGACTTGCTCCATTCAATCATATGAATGTGGTAGCAGTGAATGATTAGTTTGAAAGATGACAAATAATTAATGATATAGAATAAGGGAGTGGAGGGAAAGAATTATAATAGTCATCATTGTGGTAATGATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGGCAACTTTTATTATCAAAATGGTATGAAAGGTTATTAGACTTGTCAATGTTGTCAACCCCATAATTTGACAAGTTTATAAATCCTCTATCATGACACAAGAAGATAAAGTGATGGTACACTTCATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGCCATGACAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGT-TCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAAAGAATGGGTCCAAATGTGATAAAATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715219" ref_strand="+" ref_description="SGN-E715219 [FB13CG01]">
      <seq>cgttaattaaaaagcaaatcgaatagtacttggacatgtagaacctggaaaaagaagaagaaaaggagggactataagagtcaaaattcgtaaaaccctaatcggtagccaaattccagtatggagggaatacagaaggcttttcgtagtgccatgtctcaggatcctaatggcagtttaagttccatttcttctgctcttgaaaaggcacccattaaatcttctgctactgtttcgtcggctgagcaatcacagcttttgcttactcgatcttccagacaagcagtatcactgtggacttgctcaaagctctgtgccatttgttttgttgctggaatatttgttggttatacactgaagcgtcgtgtacgccgatgggcttccaaatttctcaagggattgaaggactaacaagttttggatacttccagtttctgattgtaatttcattttccatgtaggtatcatatcacattgtacttttctggccatgatatacagaagtcttttatgggtttttgctgcataagcactgaattgtgtttgatacaaaaggaatttatcaactttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="10420" stop="12386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10717" g_stop="10993" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="3" r_stop="278" r_length="276" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10994" i_stop="11794" i_length="801">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.294" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11795" g_stop="12091" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="575" r_length="297" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="576" polyA_stop="587"/>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E715219" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10717" e_stop="10993"/>
          <exon e_start="11795" e_stop="12091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTAAAAAGCAAATCGAATAGTACTTGGACATGTAGAACCTGGAAAAAGAAGAAGAAAAGGAGGGACTATAAGAGTCAAAATTCGTAAAACCCTAATCGGTAGCCAAATTCCAGTATGGAGGGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCAGGATCCTAATGGCAGTTTAAGTTCCATTTCTTCTGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAGGTTCTTCCCACTTACTTTCCCAGTTTGCTATTTACCTGCGTTTATTTTACTTATTTTCTTACAATAATTTGACCTTTGCCGATCATAACTGTGTGATTACTAGGTGTGTCACATAACCCTTTCCCTTTTTCAACTCAATTTGATCCATGACGAATTGTGGCTTTTGGGAAATAATTATTGTAGGTTGTGAATTGTGATTTCATTCAAGCTTAGGAGTTTGTAGTTTGGTTACCCTTACTTTTTTTGGGATGAAGTATGAACTCATACAAACCTTCCAAGTTTTGCTAAGTGTGTGGTCTAAGATATCGGAACTTAAATGGTGCAGAAATCGGTCGAAGAACACCAAAAACCTGGCTCTAGATTTTTGTAGTGTTATTCATAGATCTTAGTATTGTTGCAGAAAAAGAAAGGTAAGTTTTTGAGTTGCTTGATATTCGTAGTATCCGTGTCATGTATGAGAGGAAATGAGTATCCGTATAGATAGAATAGTTTTTATCAGACCGGTAATGAGATAGCTTGACATAAGGTCTTTAATTAATAAGTTTATGTGTTTACATGATAGAAAGATGTACCCAGACTAGAAATTGAGATTGAGGATCTGTGCATTTTCATCTAGTATTATCACCAGCTACCACTACTGATGGTCAGTTCCACATTTTCGGTGCTGAACTTTTAAATCTATTTTATTTGAAACCCAAGTTAAGTATATCATAGCTTTTGTTAGTATAGTATCCTTGTTTAAATGTGACTAATGGAAATTATTGACACTCTCATGGTAAAGCTGTACATCTTCTATTGTAGACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATATCACATTGTACTTTTCTGGCCATGATATACAGAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGAATTGTGTTTGATACAAAAGGAATTTATCAACTTTCTTCA</genome_strand>
        <mrna_strand>TTA-ATTAAAAAGCAAATCGAATAGTACTTGGACATGTAGAACCTGGAAAAAGAAGAAGAAAAGGAGGGACTATAAGAGTCAAAATTCGTAAAACCCTAATCGGTAGCCAAATTCCAGTATGGAGGGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCAGGATCCTAATGGCAGTTTAAGTTCCATTTCTTCTGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATATCACATTGTACTTTTCTGGCCATGATATACAGAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGAATTGTGTTTGATACAAAAGGAATTTATCAACTTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580079" ref_strand="+" ref_description="SGN-E580079 [5322]">
      <seq>ggaatacagaaggcttttcgtagtgccatgtctcaggctggtccaaatggcagtttcagttccatttcatctgctcttgaaaaagcacccattacatcttctgcttctgtttcgtcggctgatcactcacagcttttgcttactcgatcttccagacaagcagtatcactgtggacttgctcaaagctctgtgccatttgttttgttgctggaatatttgtcggttatacactgaagcgtcgtgtacgccgatgggcttccaaatttctcaagggattgaaggactaacaagttttggatacttccagtttctgattgtaatttcattttccatgtaggtatcgtatcatattgtactttttctggccatgatatacaaaagtcttttatgggtttttgctgcataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="10542" stop="12345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10842" g_stop="10993" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.901"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10994" i_stop="11794" i_length="801">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.294" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11795" g_stop="12052" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="414" r_length="259" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E580079" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E580079" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10842" e_stop="10993"/>
          <exon e_start="11795" e_stop="12052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCA-G--GATCCTAATGGCAGTTTAAGTTCCATTTCTTCTGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAGGTTCTTCCCACTTACTTTCCCAGTTTGCTATTTACCTGCGTTTATTTTACTTATTTTCTTACAATAATTTGACCTTTGCCGATCATAACTGTGTGATTACTAGGTGTGTCACATAACCCTTTCCCTTTTTCAACTCAATTTGATCCATGACGAATTGTGGCTTTTGGGAAATAATTATTGTAGGTTGTGAATTGTGATTTCATTCAAGCTTAGGAGTTTGTAGTTTGGTTACCCTTACTTTTTTTGGGATGAAGTATGAACTCATACAAACCTTCCAAGTTTTGCTAAGTGTGTGGTCTAAGATATCGGAACTTAAATGGTGCAGAAATCGGTCGAAGAACACCAAAAACCTGGCTCTAGATTTTTGTAGTGTTATTCATAGATCTTAGTATTGTTGCAGAAAAAGAAAGGTAAGTTTTTGAGTTGCTTGATATTCGTAGTATCCGTGTCATGTATGAGAGGAAATGAGTATCCGTATAGATAGAATAGTTTTTATCAGACCGGTAATGAGATAGCTTGACATAAGGTCTTTAATTAATAAGTTTATGTGTTTACATGATAGAAAGATGTACCCAGACTAGAAATTGAGATTGAGGATCTGTGCATTTTCATCTAGTATTATCACCAGCTACCACTACTGATGGTCAGTTCCACATTTTCGGTGCTGAACTTTTAAATCTATTTTATTTGAAACCCAAGTTAAGTATATCATAGCTTTTGTTAGTATAGTATCCTTGTTTAAATGTGACTAATGGAAATTATTGACACTCTCATGGTAAAGCTGTACATCTTCTATTGTAGACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATATCACATTGTAC-TTTTCTGGCCATGATATACAGAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGA</genome_strand>
        <mrna_strand>GGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCAGGCTGGTCCAAATGGCAGTTTCAGTTCCATTTCATCTGCTCTTGAAAAAGCACCCATTACATCTTCTGCTTCTGTTTCGTCGGCTGATCACTCACAGCTTTTGCTTACTCGATCTTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTCGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCGTATCATATTGTACTTTTTCTGGCCATGATATACAAAAGTCTTTTATGGGTTTTTGCTGCATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580486" ref_strand="+" ref_description="SGN-E580486 [5729]">
      <seq>ggaatacagaaggcttttcgtagtgccatgtctcaggctggtccaaatggcagtttcagttccatttcatcgtgctcttgaaaaagcacccattacatcttctgcttctgtttcgtcggctgatcactcacagcttttgcttactcgatcttccagacaagcagtatcactgtggacttgctcaaagctctgtgccatttgttttgttgctggaatatttgtcggttatacactgaagcgtcgtgtacgccgatgggcttccaaatttctcaagggattgaaggactaacaagttttggatacttccagtttctgattgtactttcattttccatgtaggtatcgtatccatattgtacctttttctgggccatgatataccaaaaagtctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="10542" stop="12326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10842" g_stop="10993" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10994" i_stop="11794" i_length="801">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.294" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11795" g_stop="12026" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="394" r_length="238" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E580486" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E580486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10842" e_stop="10993"/>
          <exon e_start="11795" e_stop="12026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCA-G--GATCCTAATGGCAGTTTAAGTTCCATTTCTTC-TGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAGGTTCTTCCCACTTACTTTCCCAGTTTGCTATTTACCTGCGTTTATTTTACTTATTTTCTTACAATAATTTGACCTTTGCCGATCATAACTGTGTGATTACTAGGTGTGTCACATAACCCTTTCCCTTTTTCAACTCAATTTGATCCATGACGAATTGTGGCTTTTGGGAAATAATTATTGTAGGTTGTGAATTGTGATTTCATTCAAGCTTAGGAGTTTGTAGTTTGGTTACCCTTACTTTTTTTGGGATGAAGTATGAACTCATACAAACCTTCCAAGTTTTGCTAAGTGTGTGGTCTAAGATATCGGAACTTAAATGGTGCAGAAATCGGTCGAAGAACACCAAAAACCTGGCTCTAGATTTTTGTAGTGTTATTCATAGATCTTAGTATTGTTGCAGAAAAAGAAAGGTAAGTTTTTGAGTTGCTTGATATTCGTAGTATCCGTGTCATGTATGAGAGGAAATGAGTATCCGTATAGATAGAATAGTTTTTATCAGACCGGTAATGAGATAGCTTGACATAAGGTCTTTAATTAATAAGTTTATGTGTTTACATGATAGAAAGATGTACCCAGACTAGAAATTGAGATTGAGGATCTGTGCATTTTCATCTAGTATTATCACCAGCTACCACTACTGATGGTCAGTTCCACATTTTCGGTGCTGAACTTTTAAATCTATTTTATTTGAAACCCAAGTTAAGTATATCATAGCTTTTGTTAGTATAGTATCCTTGTTTAAATGTGACTAATGGAAATTATTGACACTCTCATGGTAAAGCTGTACATCTTCTATTGTAGACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATAT-CACATTGTA-C-TTTTCT-GGCCATGATATA-C-AGAAGTCTTTT</genome_strand>
        <mrna_strand>GGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCAGGCTGGTCCAAATGGCAGTTTCAGTTCCATTTCATCGTGCTCTTGAAAAAGCACCCATTACATCTTCTGCTTCTGTTTCGTCGGCTGATCACTCACAGCTTTTGCTTACTCGATCTTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTCGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTACTTTCATTTTCCATGTAGGTATCGTATCCATATTGTACCTTTTTCTGGGCCATGATATACCAAAAAGTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567674" ref_strand="+" ref_description="SGN-E567674 [11836]">
      <seq>gcatttcgtagtgccatgtctcaggctgatccaaatggcagtttcagttccatttcttctgctcttgaaaaagcacccattaaatcttctgcttctgtttcgtcggctgatcaatcacagcttttgcttactcgatcttccagacaagcagtatcactgtggacttgctcaaagctctgtgccatttgttttgttgctggaatatttgtcggttatacactgaagcgtcgtgtacgccgatgggcttccaaatttctcaagggattgaaggactaacaagttttggatacttccagtttctgattgtaatttcattttccatgtaggtattgtatcacattgtactttttctggcgccatgatatacaaaagtcttttatgggtttttgctgcataagcactgaatcgtatttatttcaaaaaaaaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="10554" stop="12364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10854" g_stop="10993" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10994" i_stop="11794" i_length="801">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.294" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11795" g_stop="12078" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="430" r_length="287" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E567674" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E567674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10854" e_stop="10993"/>
          <exon e_start="11795" e_stop="12078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTCGTAGTGCCATGTCTCA-G--GATCCTAATGGCAGTTTAAGTTCCATTTCTTCTGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAGGTTCTTCCCACTTACTTTCCCAGTTTGCTATTTACCTGCGTTTATTTTACTTATTTTCTTACAATAATTTGACCTTTGCCGATCATAACTGTGTGATTACTAGGTGTGTCACATAACCCTTTCCCTTTTTCAACTCAATTTGATCCATGACGAATTGTGGCTTTTGGGAAATAATTATTGTAGGTTGTGAATTGTGATTTCATTCAAGCTTAGGAGTTTGTAGTTTGGTTACCCTTACTTTTTTTGGGATGAAGTATGAACTCATACAAACCTTCCAAGTTTTGCTAAGTGTGTGGTCTAAGATATCGGAACTTAAATGGTGCAGAAATCGGTCGAAGAACACCAAAAACCTGGCTCTAGATTTTTGTAGTGTTATTCATAGATCTTAGTATTGTTGCAGAAAAAGAAAGGTAAGTTTTTGAGTTGCTTGATATTCGTAGTATCCGTGTCATGTATGAGAGGAAATGAGTATCCGTATAGATAGAATAGTTTTTATCAGACCGGTAATGAGATAGCTTGACATAAGGTCTTTAATTAATAAGTTTATGTGTTTACATGATAGAAAGATGTACCCAGACTAGAAATTGAGATTGAGGATCTGTGCATTTTCATCTAGTATTATCACCAGCTACCACTACTGATGGTCAGTTCCACATTTTCGGTGCTGAACTTTTAAATCTATTTTATTTGAAACCCAAGTTAAGTATATCATAGCTTTTGTTAGTATAGTATCCTTGTTTAAATGTGACTAATGGAAATTATTGACACTCTCATGGTAAAGCTGTACATCTTCTATTGTAGACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATATCACATTGTAC-TTTTCT-G-GCCATGATATACAGAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGAATTGTGTTTGATACAAAAGGAATTTA</genome_strand>
        <mrna_strand>GCATTTCGTAGTGCCATGTCTCAGGCTGATCCAAATGGCAGTTTCAGTTCCATTTCTTCTGCTCTTGAAAAAGCACCCATTAAATCTTCTGCTTCTGTTTCGTCGGCTGATCAATCACAGCTTTTGCTTACTCGATCTTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTCGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATTGTATCACATTGTACTTTTTCTGGCGCCATGATATACAAAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGAATCGTATTTATTTCAAAAAAAAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623183" ref_strand="+" ref_description="SGN-E623183 [88272]">
      <seq>cttttcgtagtgccatgtctcaggctggtccaaatggcagtttcagttccatttcatctgctcttgaaaaagcacccattacatcttctgcttctgtttcgtcggctgatcactcacagcttttgcttactcgatcttccagacaagcagtatcactgtggacttgctcaaagctctgtgccatttgttttgttgctggaatatttgtcggttatacactgaagcgtcgtgtacgccgatgggcttccaaatttctcaagggattgaaggactaacaagttttggatacttccagtttctgattgtaatttcattttccatgtaggtatcgtatcatattgtactttttctggccatgatatacaaaagtcttttatgggtttttgctgcataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="10555" stop="12345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10855" g_stop="10993" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10994" i_stop="11794" i_length="801">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.294" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11795" g_stop="12055" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="404" r_length="262" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E623183" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10855" e_stop="10993"/>
          <exon e_start="11795" e_stop="12055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCGTAGTGCCATGTCTCAGG---ATCCTAATGGCAGTTTAAGTTCCATTTCTTCTGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAGGTTCTTCCCACTTACTTTCCCAGTTTGCTATTTACCTGCGTTTATTTTACTTATTTTCTTACAATAATTTGACCTTTGCCGATCATAACTGTGTGATTACTAGGTGTGTCACATAACCCTTTCCCTTTTTCAACTCAATTTGATCCATGACGAATTGTGGCTTTTGGGAAATAATTATTGTAGGTTGTGAATTGTGATTTCATTCAAGCTTAGGAGTTTGTAGTTTGGTTACCCTTACTTTTTTTGGGATGAAGTATGAACTCATACAAACCTTCCAAGTTTTGCTAAGTGTGTGGTCTAAGATATCGGAACTTAAATGGTGCAGAAATCGGTCGAAGAACACCAAAAACCTGGCTCTAGATTTTTGTAGTGTTATTCATAGATCTTAGTATTGTTGCAGAAAAAGAAAGGTAAGTTTTTGAGTTGCTTGATATTCGTAGTATCCGTGTCATGTATGAGAGGAAATGAGTATCCGTATAGATAGAATAGTTTTTATCAGACCGGTAATGAGATAGCTTGACATAAGGTCTTTAATTAATAAGTTTATGTGTTTACATGATAGAAAGATGTACCCAGACTAGAAATTGAGATTGAGGATCTGTGCATTTTCATCTAGTATTATCACCAGCTACCACTACTGATGGTCAGTTCCACATTTTCGGTGCTGAACTTTTAAATCTATTTTATTTGAAACCCAAGTTAAGTATATCATAGCTTTTGTTAGTATAGTATCCTTGTTTAAATGTGACTAATGGAAATTATTGACACTCTCATGGTAAAGCTGTACATCTTCTATTGTAGACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATATCACATTGTAC-TTTTCTGGCCATGATATACAGAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGAATT</genome_strand>
        <mrna_strand>CTTTTCGTAGTGCCATGTCTCAGGCTGGTCCAAATGGCAGTTTCAGTTCCATTTCATCTGCTCTTGAAAAAGCACCCATTACATCTTCTGCTTCTGTTTCGTCGGCTGATCACTCACAGCTTTTGCTTACTCGATCTTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTCGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCGTATCATATTGTACTTTTTCTGGCCATGATATACAAAAGTCTTTTATGGGTTTTTGCTGCATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E216431" ref_strand="+" ref_description="SGN-E216431 [cLEL-1-E6](-)">
      <seq>gggtgatgccaggtcaactctcatcaccatggtccaggcactcaaccatgcaaaacacggtgttgacatcctgtctggcactcaggtaaggacacattttgcaaggcccaactggaaagaagtattcaacaaaattgcttcaaagcatccatattccacagtaggagtcttctactgcgggttgcctgccttggcaaaggaattgaagaagctatcacaagaattgacttataagacatccacacgatttgagttccacaaagagtacttttgaaatagcaaatttaccaaataagcgacatgatattctttatttttcttttcattttttgtaattgtccatatgattaagaggaatgaatgtcccactacacactgatccagagcaatgtaaatgcatatattatacgagttacaatagaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="14134" stop="12310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13834" g_stop="13750" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13749" i_stop="13507" i_length="243">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.705" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13506" g_stop="13428" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="164" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13427" i_stop="12875" i_length="553">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12874" g_stop="12600" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="439" r_length="275" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E216431" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13834" e_stop="13750"/>
          <exon e_start="13506" e_stop="13428"/>
          <exon e_start="12874" e_stop="12600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTGATGCCAGGTCAACTCTCATCACCATGGTCCAGGCACTCAACCATGCAAAACACGGTGTTGACATCCTGTCTGGCACTCAGGTATTATAATCCATCAATATTCTCAACCAAGCCTTCTTGAAGAGAAATGGAAAAGAAATATAATGTAGTAAGGAATTTTAGCTTAGCTCAACGAGCGCCATGTTCTAGCTAAAAAAATGTTTTATTATTCAAAAGCTACTTAATTTCATGAAAAGTTTTCAATCACAACACAGATTAGAGAGAAGCAAACTAGAGGAGAAATATACTCCACCCCCAGGACTAATTAAACTAATTCTACTGCAGGTAAGGACACATTTTGCAAGGCCCAACTGGAAAGAAGTATTCAACAAAATTGCTTCAAAGCATCCATATTCCACAGTAGGTAAGAAATTTCTACAACCTAAACTCCAATAAACTGTAAGCAGAAGTGGTTCTAAGAAGTGTTGTGTCATACCTATTAGTTAACCTCTCACCTACAATATGTCCAAACCTCCTGCCAGCGGAAATTATCACATAATAGAGGCGAAGGAAGAAAACAACTATGTATAATCAAACACATGAAACATGAAGCAGAACATAATGATGCAGCAGCATTACCAATTATAAGAATGGCATCCTTTTTGTCTAGATGAAGATAGAAAATATAGCTCTAAAATGCATTGTCATGATGAAGTAGCAAGGCTTTATAAATCTTAATTTGTCTTTCGAAGGAACCTAAAGAATGTAAATGAGATTGAAATGTGTTCTTTAAACTTCAGAAAGAAAAAAAAAACTCTAACTTCATGACAATGACCATTTAAAAAGAAGCAGCCTCCAACAGGGCACTTTCCTGATAACATTTTGCATTTTCAACAGAGGAGGGGAGAGAAAAAAGAACTAAAAGGAAGAAGATATTTAATAGATTAGTTAACAACACAATTTTATGTGATTCACAGGAGTCTTCTACTGCGGGTTGCCTGCCTTGGCAAAGGAATTGAAGAAGCTATCACAAGAATTGACTTATAAGACATCCACACGATTTGAGTTCCACAAAGAGTACTTTTGAAATAGCAAATTTACCAAATAAGCGACATGATATTCTTTATTTTTCTTTTCATTTTTTGTAATTGTCCATATGATTAAGAGGAATGAATGTACCACTACACACTGATCCAGAGAAATGTAAATGCATATATTATACGAGTTACAATAGAGAAAGAAGTCAAAATAG</genome_strand>
        <mrna_strand>GGGTGATGCCAGGTCAACTCTCATCACCATGGTCCAGGCACTCAACCATGCAAAACACGGTGTTGACATCCTGTCTGGCACTCAG...................................................................................................................................................................................................................................................GTAAGGACACATTTTGCAAGGCCCAACTGGAAAGAAGTATTCAACAAAATTGCTTCAAAGCATCCATATTCCACAGTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCTTCTACTGCGGGTTGCCTGCCTTGGCAAAGGAATTGAAGAAGCTATCACAAGAATTGACTTATAAGACATCCACACGATTTGAGTTCCACAAAGAGTACTTTTGAAATAGCAAATTTACCAAATAAGCGACATGATATTCTTTATTTTTCTTTTCATTTTTTGTAATTGTCCATATGATTAAGAGGAATGAATGTCCCACTACACACTGATCCAGAGCAATGTAAATGCATATATTATACGAGTTACAATAGAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239045" ref_strand="+" ref_description="SGN-E239045 [cLEL-9-F14](-)">
      <seq>aatgttcgacaaactggaaagaattagtcccatgttgagcttaagagtctctgcagctcctttagcagttgccaagcagtaacccatgacttgaaatgctgctctttgcctatactgcaagaatttccaggtgaaaagtacagccataaccatcacccatagcaaaagaatccagcctctttgccagttatctaatacaaggcatttaaatgcataacttgctctctttactaggttcttggtcttattaanagttcctaagttttgaccccatccaacacttgttgtgcttaagggtctgctgtaggtcatgtaattgtccctttgcagaagaagcgtttccaactgccataactgtaaagaaaaagataatatatcaaaaagtcattttgccaaaccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="16077" stop="17085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16377" g_stop="16785" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="407" polyA_stop="416"/>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E239045" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16377" e_stop="16785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTTTCGACAAACTGGGAGAAGAATTAGTGCCATGTTGAGCTTGAGAGTCTCTGCAGCTCCTTTAGCAGTTGCCAAGCAGTAACCCATGACTTGAAATGCTGCTCTTTGCCTATACTGCAAGAATTTCCAGGTGAAAAGTACAGCCATAACCATCACCCATAGCAAAAGAATCCAGCCTCTTTGCCAGTTATCTAATACAAGGCATTTAAATGCATAACTTGCTCTCTTTACTAGGTTCTTGGTCTTATTAAGAGTTCCTAAGTTTTGACCCCATCCAACACTTGTTGTGCTTAAGGGTCTGCTGTAGGTCATGTAATTGTCCCTTTGCAGAAGAAGCGTTTCCAACTGCCATAACTGTAAAGAAAAAGATAATATATCAAAAAGTCATTTTGCCAAACCAATAAAA</genome_strand>
        <mrna_strand>AATGT-TCGACAAACT-GGA-AAGAATTAGTCCCATGTTGAGCTTAAGAGTCTCTGCAGCTCCTTTAGCAGTTGCCAAGCAGTAACCCATGACTTGAAATGCTGCTCTTTGCCTATACTGCAAGAATTTCCAGGTGAAAAGTACAGCCATAACCATCACCCATAGCAAAAGAATCCAGCCTCTTTGCCAGTTATCTAATACAAGGCATTTAAATGCATAACTTGCTCTCTTTACTAGGTTCTTGGTCTTATTAANAGTTCCTAAGTTTTGACCCCATCCAACACTTGTTGTGCTTAAGGGTCTGCTGTAGGTCATGTAATTGTCCCTTTGCAGAAGAAGCGTTTCCAACTGCCATAACTGTAAAGAAAAAGATAATATATCAAAAAGTCATTTTGCCAAACCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238692" ref_strand="+" ref_description="SGN-E238692 [cLEL-9-F14](-)">
      <seq>agtctctgcagctcctttagcagttgccaagcagtaacccatgacttgaaatgctgctctttgcctatactgcaagaatttccaggtgaaaagtacagccataaacatcacccatagcaaaagaatccagcctctttgccagttatctaatacaaggcatttaaatgcataacttgctctctttactaggttcttggtcttattaagagttcctaagttttgaccccatccaacacttgttgtgcttaagggtctgctgtaggtcatgtaattgtccctttgcagaagaagcgtttccaactgccataactgtaaagaaaaagataatatatcaaaaagtcattttgcccaaccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="16125" stop="17085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16425" g_stop="16785" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="362" polyA_stop="371"/>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E238692" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238692" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16425" e_stop="16785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCTCTGCAGCTCCTTTAGCAGTTGCCAAGCAGTAACCCATGACTTGAAATGCTGCTCTTTGCCTATACTGCAAGAATTTCCAGGTGAAAAGTACAGCCATAACCATCACCCATAGCAAAAGAATCCAGCCTCTTTGCCAGTTATCTAATACAAGGCATTTAAATGCATAACTTGCTCTCTTTACTAGGTTCTTGGTCTTATTAAGAGTTCCTAAGTTTTGACCCCATCCAACACTTGTTGTGCTTAAGGGTCTGCTGTAGGTCATGTAATTGTCCCTTTGCAGAAGAAGCGTTTCCAACTGCCATAACTGTAAAGAAAAAGATAATATATCAAAAAGTCATTTTGCCAAACCAATAAAA</genome_strand>
        <mrna_strand>AGTCTCTGCAGCTCCTTTAGCAGTTGCCAAGCAGTAACCCATGACTTGAAATGCTGCTCTTTGCCTATACTGCAAGAATTTCCAGGTGAAAAGTACAGCCATAAACATCACCCATAGCAAAAGAATCCAGCCTCTTTGCCAGTTATCTAATACAAGGCATTTAAATGCATAACTTGCTCTCTTTACTAGGTTCTTGGTCTTATTAAGAGTTCCTAAGTTTTGACCCCATCCAACACTTGTTGTGCTTAAGGGTCTGCTGTAGGTCATGTAATTGTCCCTTTGCAGAAGAAGCGTTTCCAACTGCCATAACTGTAAAGAAAAAGATAATATATCAAAAAGTCATTTTGCCCAACCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257955" ref_strand="-" ref_description="SGN-E257955 [cLEG-48-I14]">
      <seq>gaagtggaaactcaaggatcgccaggctctagggttgatccggttcactttgtcaagaaacatggcgttcaacatcgtgaagaagaagactacgtccggtctgttgaaggcactatcaaatatgtatgaaaaaccatcggctatgaacaaagtatatttgatgcgtagattgttcaatttacagatgtttgaaactggatacgtttctgatcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacgcgagactagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="37775" stop="23730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37475" g_stop="37254" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37253" i_stop="36955" i_length="299">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36954" g_stop="36922" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="255" r_length="33" r_score="0.576"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E257955" ref_strand="-">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>255</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257955" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="37475" e_stop="37254"/>
          <exon e_start="36954" e_stop="36922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTGGAAACTCAAGGATCGCCAGGCTCTAGGGTTGATCCGGTTGACTTTGTCAAGAAACGTGGCGTTCAACATTGTGAAGGAGAAGACTACGTCCGGTCTGTTGAAGGCACTGTCAAACATGTATGAAAAACCATCGGCTATGAACAAGGTTTATTTGATGCGTAGATTGTTCAATTTACAGATGTCTGAAACTGGATCCATTTCCGATCATATAAACGAGTTCAATATGATTGTGAGTCAACTCAATTATGTGGATATTAATTTCAAAGATGAAATTAAGGCGTTGATTTTGATGTCATCTCTGCCCGAGTCTTGGGATACTGTTGTTGTTGCGATTAGCAGTTCTCGTGGATCTGAGAAACTGAAGTTTGATGAAATTCGTGATGTTATTCTTAGTGAAAGTATTCGCAAATGAGAAGTGGGAGATTCATCGGGCTGTGCTCTCAGCGTTGATCGAAGGGGAAGAAGTAAGACGAAAGGCCAAAATCAACATGGTCGATCAAAATCAAAGAATCGAGGAAAATCACTGAACAGATCAAACGTGACTTGTT</genome_strand>
        <mrna_strand>GAAGTGGAAACTCAAGGATCGCCAGGCTCTAGGGTTGATCCGGTTCACTTTGTCAAGAAACATGGCGTTCAACATCGTGAAGAAGAAGACTACGTCCGGTCTGTTGAAGGCACTATCAAATATGTATGAAAAACCATCGGCTATGAACAAAGTATATTTGATGCGTAGATTGTTCAATTTACAGATGTTTGAAACTGGATACGTTTCTGATCAAAAAAAAAA...........................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAACGCGAGACTAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355122" ref_strand="+" ref_description="SGN-E355122 [cTOS-18-H18]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtatttttcctcatcaagatgagtacaaaggaaagttcgcaccaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="45287" stop="43957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44992" g_stop="44257" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E355122" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44992" e_stop="44257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCAATAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTTGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGTGCTTTTCACAAAAGAGTAAGAACCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTACAAAGGAAAGTTCGCACCAAACTG</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGATGAGTACAAAGGAAAGTTCGCACCAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350936" ref_strand="+" ref_description="SGN-E350936 [cTOS-7-D2]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcancaaagagtaagagccagaattttgaaagtggccagttggttcttaagcgtatttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="45287" stop="43997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44992" g_stop="44297" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="695" r_length="695" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E350936" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44992" e_stop="44297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCAATAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTTGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGTGCTTTTCACAAAAGAGTAAGAACCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTC</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCANCAAAGAGTAAGAGCCAG-AATTTTGAAAGTGGCCAGTTGGTTCTTAAGCGTATTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353644" ref_strand="+" ref_description="SGN-E353644 [cTOS-10-I24]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="45287" stop="43998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44992" g_stop="44298" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E353644" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44992" e_stop="44298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCAATAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTTGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGTGCTTTTCACAAAAGAGTAAGAACCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTT</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707410" ref_strand="+" ref_description="SGN-E707410 [FA32DF11]">
      <seq>cgttttgagacgggtgccacctcacgaacttaacgctatgagttcaccttggccatttgtagcttggggaatggatgtcatcagttctatagagtctaccgcttctaatggacatagattcattttggttgccattgattatttcaccaagtgggtggaagcaaccccttacaagtcggtaaccaagaaagtggtggtcgattttgttcgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggggcaaatctcaacagtcatttgatgaaacagatatatgaacaatttaagttattcatcgaaagtcaactgcttatcgcccccaaatgaacagagctgtagaagccgccaacaaaaatatcaagaagattttgaggaaaatgattgacaaacagcggggttggcatgaaatgttgccatatgcttttctaggttatcgaacgacggtcagaacatcgacttgggctactccatacttgctagtatatggaacagaggcagtcgtgcctgttgaagtcgagataccgtcattgcggatcatccaagaagctgaattaagtaacgccgaatggcttagcaaacagattgatcaactagccttaattgataagaagagaatagttgcgtttgccatggcaagttgtacagacagagaatgactcgcgcttttcacaaaagagtaagagccaggaattttgaagttggtcagttggttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="-" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="45350" stop="44011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45051" g_stop="44311" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="-" ref_id="SGN-E707410" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45051" e_stop="44311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCTGATAAGGGTGCCACCTCACGAACTCAATGCTATGAGCTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCAATAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTTGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGTGCTTTTCACAAAAGAGTAAGAACCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</genome_strand>
        <mrna_strand>CGTTTTGAGACGGGTGCCACCTCACGAACTTAACGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCAGTTCTATAGAGTCTACCGCTTCTAATGGACATAGATTCATTTTGGTTGCCATTGATTATTTCACCAAGTGGGTGGAAGCAACCCCTTACAAGTCGGTAACCAAGAAAGTGGTGGTCGATTTTGTTCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGGGCAAATCTCAACAGTCATTTGATGAAACAGATATATGAACAATTTAAG-TTATTCATCGAAAGTCAACTGCTTATCGCCCCCAAATGAACAGAGCTGTAGAAGCCGCCAACAAAAATATCAAGAAGATTTTGAGGAAAATGATTGACAAACAGCGGGGTTGGCATGAAATGTTGCCATATGCTTTTCTAGGTTATCGAACGACGGTCAGAACATCGACTTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGGCAGTCGTGCCTGTTGAAGTCGAGATACCGTCATTGCGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGCTTAGCAAACAGATTGATCAACTAGCCTTAATTGATAAGAAGAGAATAGTTGC-GTTTGCCATGGCAAGTTGTACAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGGAATTTTGAAGTTGGTCAGTTGGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243204" ref_strand="+" ref_description="SGN-E243204 [cLEE-2-O19]">
      <seq>aggctggttctgagttggatctatgtttgatgaagggaagtagaccggaggtcttgcatcagcaatattagtaccaaatccaggtggaggcgcatcctgtctccgttgcatttcaactttcatttcagcaatctgttgcatcagttgcatgatcaattcattctgttccactacagtgggctgagcgaccacaacgtcagtaagacgcccttcgtcattgttgtctcccataactgtttttcctttatctgaatttgatcgagggaaggaatctgtaggacctttcgatctggtgaagtaaggatgatctgccagctttattgacacagatcagtaaaaaggtacctgaaaggtaaaaacaactcaaaggcaaatttgttagtgcatatccagagtacaaaatgcttaatatcgcacataaaaccgataaacacacaagtcgttttgtttgaggatatcttaacccacgaataaggacggatatatattttgaacaaacaggaatttgtttgtttggcgttatcttgggaaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="50837" stop="51971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51137" g_stop="51671" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E243204" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51137" e_stop="51671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATTTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACTACAGTGGGCTGAGCCACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTTGACCTGGTGAAGTAAGGATTATCTGCCAGCTTTATCGACACAGATCAGT-AAAAGGTACCTGAGAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTACATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAACACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</genome_strand>
        <mrna_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAATATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGTTGCATGATCAATTCATTCTGTTCCACTACAGTGGGCTGAGCGACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTATCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGTAAAAAGGTACCTGAAAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCTTAATATCGCACATAAAACCGATAAACACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGTTATCTTGGGAAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577849" ref_strand="+" ref_description="SGN-E577849 [LE08AD09]">
      <seq>cgaaaatggaggcttgtagacgatttcttcttcatcatcctcctcagtcacttcacggtcggggccactgttatctgctcccagatcatgggcgaggtattttccgccctttgggtcgctatgggtcgccaattcctcgtcgagcgccgcgtttctgtccaacaacacagcagtctcgatatctatcttcgcctctctcgcctttccttcgtgtatctctaaacgaagcaagttcaaccttttccttaggctttcggtttccatctcaacctccttctttctctttatctgtgacgccagatcttcatccaatgttgtgaccgcagctttgtagatcgccgtggtcgcgtctactttgagtccttcttccttaaccttctgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0287B22-QNLqu/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0287B22.1" temp_strand="+" temp_description="C07HBa0287B22.1  AC210363.2 htgs_phase:3 submitted_to_sgn_as:C07HBa0287B22 upload_account_name:france">
        <position start="51674" stop="52659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51974" g_stop="52359" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0287B22.1" gen_strand="+" ref_id="SGN-E577849" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0287B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51974" e_stop="52359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAATCACTTCATGGTCGGGGCCACTGTTGCCTGTTCCCTGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTTGCCAATTCCTCGTCGATCGCCGCGCTTCTGTCCAATAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTTGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTTCGGTTTCCCTCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAAGGTTGTGACCGCAGCCTTGTAGATTGTCGTGGTCACGTCTACTTTGAGTCCTTCCTCCTTAACCTTCTGAATCT</genome_strand>
        <mrna_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGTCGGGGCCACTGTTATCTGCTCCCAGATCATGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGCGTTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCTAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>25</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="571" PGL_stop="239"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="571" e_stop="374"/>
            <exon e_start="302" e_stop="239"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="0.995"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="571" e_stop="374" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="1.000">
            <gDNA_intron_boundary i_start="373" i_stop="303" i_length="71"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="302" e_stop="239" e_length="64"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="571" stop="374"/>
              <exon start="302" stop="239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="570" stop="383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291422" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATGGCTTCTCTATCGGTCTCTGTAAAACACACTCTTCCTTCTCTGCTCCAATATGCTCAAACCCCAAAAAAACCCATCTCCCAAAACCTTACCATTGTCTCCAGATCATCACAATCCCATTTTTATGGCCTTGAAGTCCTTCATTCACCTTCTTTTTCAACCCCATCTTCTTCAAGAACTTCAATTGTTGCTAAG : GTGAATAAAGGTTCAGCGCCTCCACCATTCACATTGAAAGATCAAGATGGAAAAAATGTGAGTC</gDNA_template>
            <first_frame> K  M  A  S  L  S  V  S  V  K  H  T  L  P  S  L  L  Q  Y  A  Q  T  P  K  K  P  I  S  Q  N  L  T  I  V  S  R  S  S  Q  S  H  F  Y  G  L  E  V  L  H  S  P  S  F  S  T  P  S  S  S  R  T  S  I  V  A  K  :  V  N  K  G  S  A  P  P  P  F  T  L  K  D  Q  D  G  K  N  V  S  </first_frame>
            <second_frame>  K  W  L  L  Y  R  S  L  *  N  T  L  F  L  L  C  S  N  M  L  K  P  Q  K  N  P  S  P  K  T  L  P  L  S  P  D  H  H  N  P  I  F  M  A  L  K  S  F  I  H  L  L  F  Q  P  H  L  L  Q  E  L  Q  L  L  L  R :   *  I  K  V  Q  R  L  H  H  S  H  *  K  I  K  M  E  K  M  *  V </second_frame>
            <third_frame>   N  G  F  S  I  G  L  C  K  T  H  S  S  F  S  A  P  I  C  S  N  P  K  K  T  H  L  P  K  P  Y  H  C  L  Q  I  I  T  I  P  F  L  W  P  *  S  P  S  F  T  F  F  F  N  P  I  F  F  K  N  F  N  C  C  *   : G  E  *  R  F  S  A  S  T  I  H  I  E  R  S  R  W  K  K  C  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="571" stop="374"/>
                    <exon start="302" stop="240"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMASLSVSVKHTLPSLLQYAQTPKKPISQNLTIVSRSSQSHFYGLEVLHSPSFSTPSSSRTSIVAKVNKGSAPPPFTLKDQDGKNVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="3364" PGL_stop="2722"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3364" e_stop="2722"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="3364" e_stop="2722" e_length="643"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3364" stop="2722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3363" stop="2809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3359" stop="2906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3315" stop="2735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267707" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAGGATCTTGAATTCAAATTTGTCATATAGTGTGGACAGATAAATGGTTGGACAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGAACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCGATAGTATAACCGTAAGATATAAAATACGGTTTGTGCCTTGGGGCATAAAAGTTTATTGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTAGCAACATATGAAAAACTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATAAAAATTCTTGAAATAATTGAGGTGTTTGAAGCATATAAGAGTTTGAATGAAACTTTTTCAATAAAGTTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAATGGGTGCAAAGAATGACGCTAATTGTCCTTGTATTTTTATGAAAAAAGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAACAATGCACATACACTGAAATTTTGATGCAATTTTATATGGATAAATCGCATTCA</gDNA_template>
            <first_frame> T  R  I  L  N  S  N  L  S  Y  S  V  D  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  T  F  *  T  G  S  P  *  I  K  V  *  C  Q  W  G  T  N  K  L  L  C  D  S  I  T  V  R  Y  K  I  R  F  V  P  W  G  I  K  V  Y  C  K  N  P  D  I  I  G  D  V  F  S  F  G  G  C  N  E  V  C  F  D  L  A  T  Y  E  K  L  E  C  M  *  *  I  I  V  M  S  S  *  T  M  K  V  I  *  K  F  L  K  *  L  R  C  L  K  H  I  R  V  *  M  K  L  F  Q  *  S  F  K  N  P  Y  M  D  *  N  S  Q  G  R  K  W  V  Q  R  M  T  L  I  V  L  V  F  L  *  K  K  S  W  *  D  K  I  L  S  *  P  T  D  *  *  F  D  K  *  N  I  C  L  T  M  H  I  H  *  N  F  D  A  I  L  Y  G  *  I  A  F  </first_frame>
            <second_frame>  R  G  S  *  I  Q  I  C  H  I  V  W  T  D  K  W  L  D  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  H  F  E  L  V  V  H  K  S  R  Y  N  V  S  G  V  Q  I  N  Y  Y  A  I  V  *  P  *  D  I  K  Y  G  L  C  L  G  A  *  K  F  I  A  K  I  L  T  L  L  E  M  F  S  P  L  V  D  A  M  R  F  V  L  I  *  Q  H  M  K  N  L  N  A  C  N  E  *  L  *  C  L  A  R  Q  *  R  L  Y  K  N  S  *  N  N  *  G  V  *  S  I  *  E  F  E  *  N  F  F  N  K  V  S  R  I  L  I  W  I  E  I  V  K  E  E  N  G  C  K  E  *  R  *  L  S  L  Y  F  Y  E  K  S  L  G  K  T  K  F  C  L  D  L  Q  I  D  N  L  T  N  E  I  F  V  *  Q  C  T  Y  T  E  I  L  M  Q  F  Y  M  D  K  S  H  S </second_frame>
            <third_frame>   E  D  L  E  F  K  F  V  I  *  C  G  Q  I  N  G  W  T  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  N  W  *  S  I  N  Q  G  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  R  K  I  *  N  T  V  C  A  L  G  H  K  S  L  L  Q  K  S  *  H  Y  W  R  C  F  L  L  W  W  M  Q  *  G  L  F  *  S  S  N  I  *  K  T  *  M  H  V  M  N  N  C  N  V  *  L  D  N  E  G  Y  I  K  I  L  E  I  I  E  V  F  E  A  Y  K  S  L  N  E  T  F  S  I  K  F  Q  E  S  L  Y  G  L  K  *  S  R  K  K  M  G  A  K  N  D  A  N  C  P  C  I  F  M  K  K  V  L  V  R  Q  N  F  V  L  T  Y  R  L  I  I  *  Q  M  K  Y  L  S  N  N  A  H  T  L  K  F  *  C  N  F  I  W  I  N  R  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0287B22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="3039" PGL_stop="3642"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3039" e_stop="3642"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="3039" e_stop="3642" e_length="604"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3039" stop="3642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273497" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTACATGCATTCAAGTTTTTCATATGTTGCTAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCAATAAACTTTTATGCCCCAAGGCACAAACCGTATTTTATATCTTACGGTTATACTATCGCATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTTCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGTCCAACCATTTATCTGTCCACACTATATGACAAATTTGAATTCAAGATCCTCGTCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACTGTCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATCGAGATCTCTTCATTTTTCATTATTTTAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTATTATGTCAATGTGCTCCCTTATAGCACTTGCCTCATTATCATGAACATATTGATCATTTGCTCCTTCCTTCTTCAAGGAATTTTATATTTGGAATCGATTGGTCTATTACGCTTTCGGCGTATCATAGACT</gDNA_template>
            <first_frame> H  Y  M  H  S  S  F  S  Y  V  A  R  S  K  Q  T  S  L  H  P  P  K  E  K  T  S  P  I  M  S  G  F  L  Q  *  T  F  M  P  Q  G  T  N  R  I  L  Y  L  T  V  I  L  S  H  N  N  L  F  V  P  H  *  H  Y  T  L  I  Y  G  L  P  V  Q  N  V  T  F  L  S  E  T  K  Y  T  *  I  V  H  F  T  C  P  T  I  Y  L  S  T  L  Y  D  K  F  E  F  K  I  L  V  T  I  Y  I  I  E  R  Y  L  I  S  K  I  L  S  T  V  I  *  Y  R  F  Q  Q  D  I  T  Y  R  D  L  F  I  F  H  Y  F  R  Y  L  N  L  F  Q  D  F  M  K  Y  Y  V  N  V  L  P  Y  S  T  C  L  I  I  M  N  I  L  I  I  C  S  F  L  L  Q  G  I  L  Y  L  E  S  I  G  L  L  R  F  R  R  I  I  D  </first_frame>
            <second_frame>  I  T  C  I  Q  V  F  H  M  L  L  D  Q  N  K  P  H  C  I  H  Q  R  R  K  H  L  Q  *  C  Q  D  F  C  N  K  L  L  C  P  K  A  Q  T  V  F  Y  I  L  R  L  Y  Y  R  I  I  I  Y  L  Y  P  T  D  I  I  P  *  F  M  D  Y  Q  F  K  M  S  L  F  *  V  K  Q  N  I  L  E  L  C  I  L  L  V  Q  P  F  I  C  P  H  Y  M  T  N  L  N  S  R  S  S  S  Q  F  I  S  L  S  A  T  S  Y  Q  R  Y  C  R  R  L  F  D  I  D  S  N  K  T  *  L  I  E  I  S  S  F  F  I  I  L  G  T  *  T  F  F  K  I  L  *  S  I  M  S  M  C  S  L  I  A  L  A  S  L  S  *  T  Y  *  S  F  A  P  S  F  F  K  E  F  Y  I  W  N  R  L  V  Y  Y  A  F  G  V  S  *  T </second_frame>
            <third_frame>   L  H  A  F  K  F  F  I  C  C  *  I  K  T  N  L  I  A  S  T  K  G  E  N  I  S  N  N  V  R  I  F  A  I  N  F  Y  A  P  R  H  K  P  Y  F  I  S  Y  G  Y  T  I  A  *  *  F  I  C  T  P  L  T  L  Y  L  D  L  W  T  T  S  S  K  C  H  F  S  K  *  N  K  I  Y  L  N  C  A  F  Y  L  S  N  H  L  S  V  H  T  I  *  Q  I  *  I  Q  D  P  R  H  N  L  Y  H  *  A  L  P  H  I  K  D  T  V  D  G  Y  L  I  S  I  P  T  R  H  N  L  S  R  S  L  H  F  S  L  F  *  V  P  E  P  F  S  R  F  Y  E  V  L  C  Q  C  A  P  L  *  H  L  P  H  Y  H  E  H  I  D  H  L  L  L  P  S  S  R  N  F  I  F  G  I  D  W  S  I  T  L  S  A  Y  H  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3423" stop="3641"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRFQQDITYRDLFIFHYFRYLNLFQDFMKYYVNVLPYSTCLIIMNILIICSFLLQGILYLESIGLLRFRRIID</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="5920" PGL_stop="5087"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5920" e_stop="5087"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="5920" e_stop="5087" e_length="834"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5920" stop="5142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5762" stop="5087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5458" stop="5104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204533" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAGACGATAGATTCAAGTTCTATCGCAGAAAAAGGTTAAGACATCAATTAGAGTTTTGATGCACCGTGATTGGGTTCAAGTCCCATAGAATTATGGCGTAACATGTCTTATATGGGTAAGACATTGAGTTTGAGCCAATGCACCATAGCGATGATAAAAAGATGACTAAGAAAAATAATATATTTTTGATGAAATATCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGCAACATGTGATAACTCTGAAATCCGTCTGTTGACTTGCTCCATTCAATCATATGAATTTGATAGTAGTGAATGATTAGTCTGAAAGATGACAAATAATTAATGATATGAATAAGGGCGTGAAGAGACAGCATTATAATAGTCATCATTGTGGTAATGATAAAAAGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGTTAATTTTTATTATCAAAATGGTATGAAAGGTCATTAGACTTGTGAATGTTGTCAACCCAATGATTTGACAAGTTTATAAATCCTCTATCATGATACAGGAAGATAAAGTGATGGTACACTTAATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGAAGAATTTTAAAGCCATGTCAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGTCACATTCCTTGAAGAAAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCTAGATGTGATAAAATCATTATGGGTTGGATAAATTCCACAACTCACCTCTATGAAAGGTTTGAGAAAAAATGAT</gDNA_template>
            <first_frame> E  K  T  I  D  S  S  S  I  A  E  K  G  *  D  I  N  *  S  F  D  A  P  *  L  G  S  S  P  I  E  L  W  R  N  M  S  Y  M  G  K  T  L  S  L  S  Q  C  T  I  A  M  I  K  R  *  L  R  K  I  I  Y  F  *  *  N  I  L  K  F  I  I  L  N  L  L  H  S  L  K  R  M  W  *  Q  H  V  I  T  L  K  S  V  C  *  L  A  P  F  N  H  M  N  L  I  V  V  N  D  *  S  E  R  *  Q  I  I  N  D  M  N  K  G  V  K  R  Q  H  Y  N  S  H  H  C  G  N  D  K  K  K  N  T  M  S  S  S  N  S  P  S  K  C  E  V  N  F  Y  Y  Q  N  G  M  K  G  H  *  T  C  E  C  C  Q  P  N  D  L  T  S  L  *  I  L  Y  H  D  T  G  R  *  S  D  G  T  L  N  L  S  K  *  C  *  G  V  S  W  K  Y  E  E  F  *  S  H  V  N  V  L  I  M  Q  I  Y  E  V  H  I  N  N  *  S  H  S  L  K  K  M  *  L  V  M  S  I  V  N  A  R  P  F  Y  K  R  M  G  L  D  V  I  K  S  L  W  V  G  *  I  P  Q  L  T  S  M  K  G  L  R  K  N  D </first_frame>
            <second_frame>  K  R  R  *  I  Q  V  L  S  Q  K  K  V  K  T  S  I  R  V  L  M  H  R  D  W  V  Q  V  P  *  N  Y  G  V  T  C  L  I  W  V  R  H  *  V  *  A  N  A  P  *  R  *  *  K  D  D  *  E  K  *  Y  I  F  D  E  I  S  *  N  S  S  Y  *  I  C  S  I  P  *  K  E  C  G  S  N  M  *  *  L  *  N  P  S  V  D  L  L  H  S  I  I  *  I  *  *  *  *  M  I  S  L  K  D  D  K  *  L  M  I  *  I  R  A  *  R  D  S  I  I  I  V  I  I  V  V  M  I  K  R  R  T  L  *  V  L  Q  I  V  L  Q  N  V  K  L  I  F  I  I  K  M  V  *  K  V  I  R  L  V  N  V  V  N  P  M  I  *  Q  V  Y  K  S  S  I  M  I  Q  E  D  K  V  M  V  H  L  I  F  Q  S  D  V  E  V  C  H  G  N  M  K  N  F  K  A  M  S  M  C  L  *  C  K  F  M  K  Y  I  *  I  I  S  H  I  P  *  R  K  C  D  L  *  *  V  S  *  M  L  D  H  S  I  R  E  W  V  *  M  *  *  N  H  Y  G  L  D  K  F  H  N  S  P  L  *  K  V  *  E  K  M   </second_frame>
            <third_frame>   K  D  D  R  F  K  F  Y  R  R  K  R  L  R  H  Q  L  E  F  *  C  T  V  I  G  F  K  S  H  R  I  M  A  *  H  V  L  Y  G  *  D  I  E  F  E  P  M  H  H  S  D  D  K  K  M  T  K  K  N  N  I  F  L  M  K  Y  L  E  I  H  H  I  E  F  A  P  F  L  E  K  N  V  V  A  T  C  D  N  S  E  I  R  L  L  T  C  S  I  Q  S  Y  E  F  D  S  S  E  *  L  V  *  K  M  T  N  N  *  *  Y  E  *  G  R  E  E  T  A  L  *  *  S  S  L  W  *  *  *  K  E  E  H  Y  E  F  F  K  *  S  F  K  M  *  S  *  F  L  L  S  K  W  Y  E  R  S  L  D  L  *  M  L  S  T  Q  *  F  D  K  F  I  N  P  L  S  *  Y  R  K  I  K  *  W  Y  T  *  S  F  K  V  M  L  R  C  V  M  E  I  *  R  I  L  K  P  C  Q  C  A  Y  N  A  N  L  *  S  T  Y  K  *  L  V  T  F  L  E  E  N  V  T  C  D  E  Y  R  E  C  S  T  I  L  *  E  N  G  S  R  C  D  K  I  I  M  G  W  I  N  S  T  T  H  L  Y  E  R  F  E  K  K  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5798" stop="5595"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIEFEPMHHSDDKKMTKKNNIFLMKYLEIHHIEFAPFLEKNVVATCDNSEIRLLTCSIQSYEFDSSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="10717" PGL_stop="12091"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10717" e_stop="10993"/>
            <exon e_start="11795" e_stop="12091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.294" e_score="0.993"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="10717" e_stop="10993" e_length="277"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.294">
            <gDNA_intron_boundary i_start="10994" i_stop="11794" i_length="801"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="11795" e_stop="12091" e_length="297"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10717" stop="10993"/>
              <exon start="11795" stop="12091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715219" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10842" stop="10993"/>
              <exon start="11795" stop="12052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580079" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10842" stop="10993"/>
              <exon start="11795" stop="12026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10854" stop="10993"/>
              <exon start="11795" stop="12078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10855" stop="10993"/>
              <exon start="11795" stop="12055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623183" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAATTAAAAAGCAAATCGAATAGTACTTGGACATGTAGAACCTGGAAAAAGAAGAAGAAAAGGAGGGACTATAAGAGTCAAAATTCGTAAAACCCTAATCGGTAGCCAAATTCCAGTATGGAGGGAATACAGAAGGCTTTTCGTAGTGCCATGTCTCAGGATCCTAATGGCAGTTTAAGTTCCATTTCTTCTGCTCTTGAAAAGGCACCCATTAAATCTTCTGCTACTGTTTCGTCGGCTGAGCAATCACAGCTTTTGCTTACTCGATCTTCCAG : ACAAGCAGTATCACTGTGGACTTGCTCAAAGCTCTGTGCCATTTGTTTTGTTGCTGGAATATTTGTTGGTTATACACTGAAGCGTCGTGTACGCCGATGGGCTTCCAAATTTCTCAAGGGATTGAAGGACTAACAAGTTTTGGATACTTCCAGTTTCTGATTGTAATTTCATTTTCCATGTAGGTATCATATCACATTGTACTTTTCTGGCCATGATATACAGAAGTCTTTTATGGGTTTTTGCTGCATAAGCACTGAATTGTGTTTGATACAAAAGGAATTTATCAACTTTCTTCA</gDNA_template>
            <first_frame> *  N  *  K  A  N  R  I  V  L  G  H  V  E  P  G  K  R  R  R  K  G  G  T  I  R  V  K  I  R  K  T  L  I  G  S  Q  I  P  V  W  R  E  Y  R  R  L  F  V  V  P  C  L  R  I  L  M  A  V  *  V  P  F  L  L  L  L  K  R  H  P  L  N  L  L  L  L  F  R  R  L  S  N  H  S  F  C  L  L  D  L  P   : D  K  Q  Y  H  C  G  L  A  Q  S  S  V  P  F  V  L  L  L  E  Y  L  L  V  I  H  *  S  V  V  Y  A  D  G  L  P  N  F  S  R  D  *  R  T  N  K  F  W  I  L  P  V  S  D  C  N  F  I  F  H  V  G  I  I  S  H  C  T  F  L  A  M  I  Y  R  S  L  L  W  V  F  A  A  *  A  L  N  C  V  *  Y  K  R  N  L  S  T  F  F  </first_frame>
            <second_frame>  K  I  K  K  Q  I  E  *  Y  L  D  M  *  N  L  E  K  E  E  E  K  E  G  L  *  E  S  K  F  V  K  P  *  S  V  A  K  F  Q  Y  G  G  N  T  E  G  F  S  *  C  H  V  S  G  S  *  W  Q  F  K  F  H  F  F  C  S  *  K  G  T  H  *  I  F  C  Y  C  F  V  G  *  A  I  T  A  F  A  Y  S  I  F  Q  :  T  S  S  I  T  V  D  L  L  K  A  L  C  H  L  F  C  C  W  N  I  C  W  L  Y  T  E  A  S  C  T  P  M  G  F  Q  I  S  Q  G  I  E  G  L  T  S  F  G  Y  F  Q  F  L  I  V  I  S  F  S  M  *  V  S  Y  H  I  V  L  F  W  P  *  Y  T  E  V  F  Y  G  F  L  L  H  K  H  *  I  V  F  D  T  K  G  I  Y  Q  L  S  S </second_frame>
            <third_frame>   K  L  K  S  K  S  N  S  T  W  T  C  R  T  W  K  K  K  K  K  R  R  D  Y  K  S  Q  N  S  *  N  P  N  R  *  P  N  S  S  M  E  G  I  Q  K  A  F  R  S  A  M  S  Q  D  P  N  G  S  L  S  S  I  S  S  A  L  E  K  A  P  I  K  S  S  A  T  V  S  S  A  E  Q  S  Q  L  L  L  T  R  S  S  R :   Q  A  V  S  L  W  T  C  S  K  L  C  A  I  C  F  V  A  G  I  F  V  G  Y  T  L  K  R  R  V  R  R  W  A  S  K  F  L  K  G  L  K  D  *  Q  V  L  D  T  S  S  F  *  L  *  F  H  F  P  C  R  Y  H  I  T  L  Y  F  S  G  H  D  I  Q  K  S  F  M  G  F  C  C  I  S  T  E  L  C  L  I  Q  K  E  F  I  N  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10824" stop="10993"/>
                    <exon start="11795" stop="11927"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PNSSMEGIQKAFRSAMSQDPNGSLSSISSALEKAPIKSSATVSSAEQSQLLLTRSSRQAVSLWTCSKLCAICFVAGIFVGYTLKRRVRRWASKFLKGLKD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10961" stop="10993"/>
                    <exon start="11795" stop="11977"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AITAFAYSIFQTSSITVDLLKALCHLFCCWNICWLYTEASCTPMGFQISQGIEGLTSFGYFQFLIVISFSM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="13834" PGL_stop="12600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13834" e_stop="13750"/>
            <exon e_start="13506" e_stop="13428"/>
            <exon e_start="12874" e_stop="12600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.705" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13834" e_stop="13750" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.705">
            <gDNA_intron_boundary i_start="13749" i_stop="13507" i_length="243"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13506" e_stop="13428" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.995">
            <gDNA_intron_boundary i_start="13427" i_stop="12875" i_length="553"/>
          </intron>
          <exon e_serial="3" e_score="0.967">
            <gDNA_exon_boundary e_start="12874" e_stop="12600" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13834" stop="13750"/>
              <exon start="13506" stop="13428"/>
              <exon start="12874" stop="12600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216431" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGGTGATGCCAGGTCAACTCTCATCACCATGGTCCAGGCACTCAACCATGCAAAACACGGTGTTGACATCCTGTCTGGCACTCAG : GTAAGGACACATTTTGCAAGGCCCAACTGGAAAGAAGTATTCAACAAAATTGCTTCAAAGCATCCATATTCCACAGTAG : GAGTCTTCTACTGCGGGTTGCCTGCCTTGGCAAAGGAATTGAAGAAGCTATCACAAGAATTGACTTATAAGACATCCACACGATTTGAGTTCCACAAAGAGTACTTTTGAAATAGCAAATTTACCAAATAAGCGACATGATATTCTTTATTTTTCTTTTCATTTTTTGTAATTGTCCATATGATTAAGAGGAATGAATGTACCACTACACACTGATCCAGAGAAATGTAAATGCATATATTATACGAGTTACAATAGAGAAAGAAGTCAAAATAG</gDNA_template>
            <first_frame> G  *  C  Q  V  N  S  H  H  H  G  P  G  T  Q  P  C  K  T  R  C  *  H  P  V  W  H  S   : G  K  D  T  F  C  K  A  Q  L  E  R  S  I  Q  Q  N  C  F  K  A  S  I  F  H  S  R :   S  L  L  L  R  V  A  C  L  G  K  G  I  E  E  A  I  T  R  I  D  L  *  D  I  H  T  I  *  V  P  Q  R  V  L  L  K  *  Q  I  Y  Q  I  S  D  M  I  F  F  I  F  L  F  I  F  C  N  C  P  Y  D  *  E  E  *  M  Y  H  Y  T  L  I  Q  R  N  V  N  A  Y  I  I  R  V  T  I  E  K  E  V  K  I  </first_frame>
            <second_frame>  G  D  A  R  S  T  L  I  T  M  V  Q  A  L  N  H  A  K  H  G  V  D  I  L  S  G  T  Q  :  V  R  T  H  F  A  R  P  N  W  K  E  V  F  N  K  I  A  S  K  H  P  Y  S  T  V   : G  V  F  Y  C  G  L  P  A  L  A  K  E  L  K  K  L  S  Q  E  L  T  Y  K  T  S  T  R  F  E  F  H  K  E  Y  F  *  N  S  K  F  T  K  *  A  T  *  Y  S  L  F  F  F  S  F  F  V  I  V  H  M  I  K  R  N  E  C  T  T  T  H  *  S  R  E  M  *  M  H  I  L  Y  E  L  Q  *  R  K  K  S  K  * </second_frame>
            <third_frame>   V  M  P  G  Q  L  S  S  P  W  S  R  H  S  T  M  Q  N  T  V  L  T  S  C  L  A  L  R :   *  G  H  I  L  Q  G  P  T  G  K  K  Y  S  T  K  L  L  Q  S  I  H  I  P  Q  *  :  E  S  S  T  A  G  C  L  P  W  Q  R  N  *  R  S  Y  H  K  N  *  L  I  R  H  P  H  D  L  S  S  T  K  S  T  F  E  I  A  N  L  P  N  K  R  H  D  I  L  Y  F  S  F  H  F  L  *  L  S  I  *  L  R  G  M  N  V  P  L  H  T  D  P  E  K  C  K  C  I  Y  Y  T  S  Y  N  R  E  R  S  Q  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13833" stop="13750"/>
                    <exon start="13506" stop="13428"/>
                    <exon start="12874" stop="12765"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDARSTLITMVQALNHAKHGVDILSGTQVRTHFARPNWKEVFNKIASKHPYSTVGVFYCGLPALAKELKKLSQELTYKTSTRFEFHKEYF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="16377" PGL_stop="16785"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16377" e_stop="16785"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="16377" e_stop="16785" e_length="409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16377" stop="16785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16425" stop="16785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238692" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATGTTTCGACAAACTGGGAGAAGAATTAGTGCCATGTTGAGCTTGAGAGTCTCTGCAGCTCCTTTAGCAGTTGCCAAGCAGTAACCCATGACTTGAAATGCTGCTCTTTGCCTATACTGCAAGAATTTCCAGGTGAAAAGTACAGCCATAACCATCACCCATAGCAAAAGAATCCAGCCTCTTTGCCAGTTATCTAATACAAGGCATTTAAATGCATAACTTGCTCTCTTTACTAGGTTCTTGGTCTTATTAAGAGTTCCTAAGTTTTGACCCCATCCAACACTTGTTGTGCTTAAGGGTCTGCTGTAGGTCATGTAATTGTCCCTTTGCAGAAGAAGCGTTTCCAACTGCCATAACTGTAAAGAAAAAGATAATATATCAAAAAGTCATTTTGCCAAACCAATAAAA</gDNA_template>
            <first_frame> N  V  S  T  N  W  E  K  N  *  C  H  V  E  L  E  S  L  C  S  S  F  S  S  C  Q  A  V  T  H  D  L  K  C  C  S  L  P  I  L  Q  E  F  P  G  E  K  Y  S  H  N  H  H  P  *  Q  K  N  P  A  S  L  P  V  I  *  Y  K  A  F  K  C  I  T  C  S  L  Y  *  V  L  G  L  I  K  S  S  *  V  L  T  P  S  N  T  C  C  A  *  G  S  A  V  G  H  V  I  V  P  L  Q  K  K  R  F  Q  L  P  *  L  *  R  K  R  *  Y  I  K  K  S  F  C  Q  T  N  K  </first_frame>
            <second_frame>  M  F  R  Q  T  G  R  R  I  S  A  M  L  S  L  R  V  S  A  A  P  L  A  V  A  K  Q  *  P  M  T  *  N  A  A  L  C  L  Y  C  K  N  F  Q  V  K  S  T  A  I  T  I  T  H  S  K  R  I  Q  P  L  C  Q  L  S  N  T  R  H  L  N  A  *  L  A  L  F  T  R  F  L  V  L  L  R  V  P  K  F  *  P  H  P  T  L  V  V  L  K  G  L  L  *  V  M  *  L  S  L  C  R  R  S  V  S  N  C  H  N  C  K  E  K  D  N  I  S  K  S  H  F  A  K  P  I  K </second_frame>
            <third_frame>   C  F  D  K  L  G  E  E  L  V  P  C  *  A  *  E  S  L  Q  L  L  *  Q  L  P  S  S  N  P  *  L  E  M  L  L  F  A  Y  T  A  R  I  S  R  *  K  V  Q  P  *  P  S  P  I  A  K  E  S  S  L  F  A  S  Y  L  I  Q  G  I  *  M  H  N  L  L  S  L  L  G  S  W  S  Y  *  E  F  L  S  F  D  P  I  Q  H  L  L  C  L  R  V  C  C  R  S  C  N  C  P  F  A  E  E  A  F  P  T  A  I  T  V  K  K  K  I  I  Y  Q  K  V  I  L  P  N  Q  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0287B22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="37475" PGL_stop="36922"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37475" e_stop="37254"/>
            <exon e_start="36954" e_stop="36922"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.928"/>
          <exon-only e_score="0.576"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="37475" e_stop="37254" e_length="222"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="37253" i_stop="36955" i_length="299"/>
          </intron>
          <exon e_serial="2" e_score="0.576">
            <gDNA_exon_boundary e_start="36954" e_stop="36922" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37475" stop="37254"/>
              <exon start="36954" stop="36922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257955" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGTGGAAACTCAAGGATCGCCAGGCTCTAGGGTTGATCCGGTTGACTTTGTCAAGAAACGTGGCGTTCAACATTGTGAAGGAGAAGACTACGTCCGGTCTGTTGAAGGCACTGTCAAACATGTATGAAAAACCATCGGCTATGAACAAGGTTTATTTGATGCGTAGATTGTTCAATTTACAGATGTCTGAAACTGGATCCATTTCCGATCATATAAACGA : GAAAATCACTGAACAGATCAAACGTGACTTGTT</gDNA_template>
            <first_frame> E  V  E  T  Q  G  S  P  G  S  R  V  D  P  V  D  F  V  K  K  R  G  V  Q  H  C  E  G  E  D  Y  V  R  S  V  E  G  T  V  K  H  V  *  K  T  I  G  Y  E  Q  G  L  F  D  A  *  I  V  Q  F  T  D  V  *  N  W  I  H  F  R  S  Y  K  R  :  E  N  H  *  T  D  Q  T  *  L  V </first_frame>
            <second_frame>  K  W  K  L  K  D  R  Q  A  L  G  L  I  R  L  T  L  S  R  N  V  A  F  N  I  V  K  E  K  T  T  S  G  L  L  K  A  L  S  N  M  Y  E  K  P  S  A  M  N  K  V  Y  L  M  R  R  L  F  N  L  Q  M  S  E  T  G  S  I  S  D  H  I  N  E :   K  I  T  E  Q  I  K  R  D  L   </second_frame>
            <third_frame>   S  G  N  S  R  I  A  R  L  *  G  *  S  G  *  L  C  Q  E  T  W  R  S  T  L  *  R  R  R  L  R  P  V  C  *  R  H  C  Q  T  C  M  K  N  H  R  L  *  T  R  F  I  *  C  V  D  C  S  I  Y  R  C  L  K  L  D  P  F  P  I  I  *  T   : R  K  S  L  N  R  S  N  V  T  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37474" stop="37254"/>
                    <exon start="36954" stop="36924"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KWKLKDRQALGLIRLTLSRNVAFNIVKEKTTSGLLKALSNMYEKPSAMNKVYLMRRLFNLQMSETGSISDHINEKITEQIKRDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="45051" PGL_stop="44257"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45051" e_stop="44257"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="45051" e_stop="44257" e_length="795"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45051" stop="44311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44992" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44992" stop="44297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44992" stop="44298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATCTGATAAGGGTGCCACCTCACGAACTCAATGCTATGAGCTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCGGCCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCAATAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATCTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATTCACCGAAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTTGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCTGAGCTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGTGCTTTTCACAAAAGAGTAAGAACCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTACAAAGGAAAGTTCGCACCAAACTG</gDNA_template>
            <first_frame> *  S  D  K  G  A  T  S  R  T  Q  C  Y  E  L  T  L  A  I  C  S  L  G  N  G  C  H  R  P  Y  R  T  G  R  F  Q  W  T  Q  I  Y  F  G  C  H  R  L  F  H  Q  M  G  G  S  S  L  L  Q  I  N  N  Q  E  S  G  G  R  L  C  P  Q  Q  S  D  L  P  I  W  S  S  R  I  H  H  H  *  *  R  C  K  S  Q  Q  S  S  D  E  R  D  M  *  T  I  *  D  Y  S  P  K  V  N  C  L  S  P  S  N  E  R  S  C  R  G  R  Q  Q  E  H  Q  E  D  S  E  E  N  D  *  Q  A  A  G  L  A  *  N  V  A  I  C  S  T  G  L  S  N  D  G  Q  N  I  N  W  G  Y  S  I  L  A  S  I  R  N  R  S  S  R  T  C  *  S  R  D  T  V  T  E  D  H  P  R  S  *  A  K  *  R  *  V  G  *  Q  T  D  *  S  T  S  L  D  *  *  K  E  D  G  C  C  L  S  W  P  V  V  *  T  K  N  D  S  C  F  S  Q  K  S  K  N  Q  K  F  *  S  W  S  V  G  S  *  A  Y  F  S  S  S  R  R  V  Q  R  K  V  R  T  K  L </first_frame>
            <second_frame>  D  L  I  R  V  P  P  H  E  L  N  A  M  S  S  P  W  P  F  V  A  W  G  M  D  V  I  G  P  I  E  P  A  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  I  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  G  V  P  E  S  I  I  T  D  N  G  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  K  I  I  H  R  R  S  T  A  Y  R  P  Q  M  N  G  A  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  M  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  A  T  P  Y  L  L  V  Y  G  T  E  A  V  V  P  V  E  V  E  I  P  S  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  S  K  R  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  Q  L  Y  R  Q  R  M  T  R  A  F  H  K  R  V  R  T  R  N  F  E  V  G  Q  L  V  L  K  R  I  F  P  H  Q  D  E  Y  K  G  K  F  A  P  N   </second_frame>
            <third_frame>   I  *  *  G  C  H  L  T  N  S  M  L  *  A  H  L  G  H  L  *  L  G  E  W  M  S  S  A  L  *  N  R  P  L  P  M  D  T  D  L  F  W  L  P  S  I  I  S  P  N  G  W  K  Q  P  L  T  N  Q  *  P  R  K  W  W  P  T  L  S  A  T  I  *  S  A  D  L  E  F  Q  N  P  S  S  L  I  T  V  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  R  L  F  T  E  G  Q  L  L  I  A  L  K  *  T  E  L  *  R  P  P  T  R  T  S  R  R  F  *  G  K  *  L  T  S  S  G  V  G  M  K  C  C  H  M  L  Y  W  V  I  E  R  R  S  E  H  Q  L  G  L  L  H  T  C  *  Y  T  E  Q  K  Q  S  Y  L  L  K  S  R  Y  R  H  *  G  S  S  K  K  L  S  *  V  T  L  S  G  L  A  N  G  L  I  N  *  P  *  L  M  K  R  G  W  L  L  F  V  M  A  S  C  I  D  K  E  *  L  V  L  F  T  K  E  *  E  P  E  I  L  K  L  V  S  W  F  L  S  V  F  F  L  I  K  T  S  T  K  E  S  S  H  Q  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45050" stop="44259"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLIRVPPHELNAMSSPWPFVAWGMDVIGPIEPAASNGHRFILVAIDYFTKWVEAASYKSITKKVVADFVRNNLICRFGVPESIITDNGANLNSHLMKEICEQFKIIHRRSTAYRPQMNGAVEAANKNIKKILRKMIDKQRGWHEMLPYALLGYRTTVRTSTGATPYLLVYGTEAVVPVEVEIPSLRIIQEAELSNAEWVSKRIDQLALIDEKRMVAVCHGQLYRQRMTRAFHKRVRTRNFEVGQLVLKRIFPHQDEYKGKFAPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="51137" PGL_stop="51671"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51137" e_stop="51671"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="51137" e_stop="51671" e_length="535"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51137" stop="51671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATTTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACTACAGTGGGCTGAGCCACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTTGACCTGGTGAAGTAAGGATTATCTGCCAGCTTTATCGACACAGATCAGTAAAAGGTACCTGAGAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTACATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAACACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</gDNA_template>
            <first_frame> R  L  V  L  S  W  I  Y  V  *  *  R  E  V  D  R  R  S  C  I  S  S  I  S  T  K  S  R  W  R  R  I  L  S  P  L  H  F  N  F  H  F  S  N  L  L  H  Q  L  H  D  Q  F  V  L  F  H  Y  S  G  L  S  H  H  N  V  S  K  T  P  F  V  I  V  V  S  H  N  C  F  S  F  V  *  I  *  S  R  E  G  I  C  R  T  F  *  P  G  E  V  R  I  I  C  Q  L  Y  R  H  R  S  V  K  G  T  *  E  V  K  T  T  Q  R  Q  I  C  *  Y  I  S  R  V  Q  N  A  *  Y  R  T  *  N  R  *  T  H  K  S  F  C  L  R  I  S  *  P  T  N  K  D  G  Y  I  F  *  T  N  R  N  L  F  V  W  R  Y  L  G  K  S  </first_frame>
            <second_frame>  G  W  F  *  V  G  S  M  F  D  E  G  K  *  T  G  G  L  A  S  A  V  L  V  P  N  P  G  G  G  A  S  C  L  R  C  I  S  T  F  I  S  A  I  C  C  I  S  C  M  I  N  S  F  C  S  T  T  V  G  *  A  T  T  T  S  V  R  R  P  S  S  L  L  S  P  I  T  V  F  P  L  S  E  F  D  R  G  K  E  S  V  G  P  F  D  L  V  K  *  G  L  S  A  S  F  I  D  T  D  Q  *  K  V  P  E  R  *  K  Q  L  K  G  K  F  V  S  T  Y  P  E  Y  K  M  H  N  I  A  H  K  T  D  K  H  T  S  R  F  V  *  G  Y  L  N  P  R  I  R  T  D  I  Y  F  E  Q  T  G  I  C  L  F  G  A  I  L  G  N  L </second_frame>
            <third_frame>   A  G  S  E  L  D  L  C  L  M  K  G  S  R  P  E  V  L  H  Q  Q  Y  *  Y  Q  I  Q  V  E  A  H  P  V  S  V  A  F  Q  L  S  F  Q  Q  F  V  A  S  A  A  *  S  I  R  S  V  P  L  Q  W  A  E  P  P  Q  R  Q  *  D  A  L  R  H  C  C  L  P  *  L  F  F  L  C  L  N  L  I  E  G  R  N  L  *  D  L  L  T  W  *  S  K  D  Y  L  P  A  L  S  T  Q  I  S  K  R  Y  L  R  G  K  N  N  S  K  A  N  L  L  V  H  I  Q  S  T  K  C  I  I  S  H  I  K  Q  I  N  T  Q  V  V  L  F  E  D  I  L  T  H  E  *  G  R  I  Y  I  L  N  K  Q  E  F  V  C  L  A  L  S  W  E  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51170" stop="51388"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REVDRRSCISSISTKSRWRRILSPLHFNFHFSNLLHQLHDQFVLFHYSGLSHHNVSKTPFVIVVSHNCFSFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="51974" PGL_stop="52359"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51974" e_stop="52359"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="51974" e_stop="52359" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51974" stop="52359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAATCACTTCATGGTCGGGGCCACTGTTGCCTGTTCCCTGATCACGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTTGCCAATTCCTCGTCGATCGCCGCGCTTCTGTCCAATAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTTGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTTCGGTTTCCCTCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAAGGTTGTGACCGCAGCCTTGTAGATTGTCGTGGTCACGTCTACTTTGAGTCCTTCCTCCTTAACCTTCTGAATCT</gDNA_template>
            <first_frame> R  K  W  R  L  V  D  D  F  F  F  I  I  L  L  N  H  F  M  V  G  A  T  V  A  C  S  L  I  T  G  E  V  F  S  A  L  W  V  A  M  G  C  Q  F  L  V  D  R  R  A  S  V  Q  *  H  S  S  L  D  I  Y  L  R  L  S  C  L  S  F  V  Y  L  Q  T  K  Q  V  Q  P  F  P  *  A  F  G  F  P  L  N  L  L  L  S  L  Y  L  *  R  Q  I  F  I  Q  G  C  D  R  S  L  V  D  C  R  G  H  V  Y  F  E  S  F  L  L  N  L  L  N   </first_frame>
            <second_frame>  E  N  G  G  L  *  T  I  S  S  S  S  S  S  S  I  T  S  W  S  G  P  L  L  P  V  P  *  S  R  A  R  Y  F  P  P  F  G  S  L  W  V  A  N  S  S  S  I  A  A  L  L  S  N  N  T  A  V  S  I  S  I  F  A  S  L  A  F  P  S  C  I  S  K  R  S  K  F  N  L  F  L  R  L  S  V  S  L  S  T  S  F  F  L  F  I  C  D  A  R  S  S  S  K  V  V  T  A  A  L  *  I  V  V  V  T  S  T  L  S  P  S  S  L  T  F  *  I  </second_frame>
            <third_frame>   K  M  E  A  C  R  R  F  L  L  H  H  P  P  Q  S  L  H  G  R  G  H  C  C  L  F  P  D  H  G  R  G  I  F  R  P  L  G  R  Y  G  L  P  I  P  R  R  S  P  R  F  C  P  I  T  Q  Q  S  R  Y  L  S  S  P  L  L  P  F  L  R  V  S  P  N  E  A  S  S  T  F  S  L  G  F  R  F  P  S  Q  P  P  S  F  S  L  S  V  T  P  D  L  H  P  R  L  *  P  Q  P  C  R  L  S  W  S  R  L  L  *  V  L  P  P  *  P  S  E  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51976" stop="52293"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMEACRRFLLHHPPQSLHGRGHCCLFPDHGRGIFRPLGRYGLPIPRRSPRFCPITQQSRYLSSPLLPFLRVSPNEASSTFSLGFRFPSQPPSFSLSVTPDLHPRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0287B22.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52059" stop="52307"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRARYFPPFGSLWVANSSSIAALLSNNTAVSISIFASLAFPSCISKRSKFNLFLRLSVSLSTSFFLFICDARSSSKVVTAAL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 113 chains have been computed
$ 
$ memory statistics:
$ 78008 bytes spliced alignments in total
$ 25 spliced alignments have been stored
$ 3120 bytes was the average size of a spliced alignment
$ 17448 bytes predicted gene locations in total
$ 11 predicted gene locations have been stored
$ 1586 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 140 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 15:23:47
-->
