<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-14 23:39:54"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334889" ref_strand="+" ref_description="SGN-E334889 [cTOE-3-D22]">
      <seq>ttcgtataaatttcatcaagcttgcaattatatatacaattacatccgcctccagcatacaagctatccagaaatcaaactgctatcatgatcaaggtcacaaggctacctgtggatatgaaagtactaggtatatggtaatatttggattaatccaagttatagtgtctcaaattcctgattttccgaatatgaagtggctctccgtagttgctgctgtcatgtccttcacatattcaattatcggatcagcacttggcttagccaaagtaatagaaaatggagaaatcaaaggaagcattacaggactgccaagttctacagctgctgagaaagtatggttggttgctcaagcgctcgggaacattgcctttgcctttccattctctcttatatttctggaggttcaggacacattaaaggcacctcctccagaaaagatcaccatgaagaaggtctcaattatgacatcctgtattacaacttttttctacctttgctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="843" stop="3142"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1143" g_stop="1203" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1204" i_stop="2173" i_length="970">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2174" g_stop="2388" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="276" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2389" i_stop="2526" i_length="138">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2527" g_stop="2660" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="410" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2661" i_stop="2749" i_length="89">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2750" g_stop="2842" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="503" r_length="93" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E334889" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1143" e_stop="1203"/>
          <exon e_start="2174" e_stop="2388"/>
          <exon e_start="2527" e_stop="2660"/>
          <exon e_start="2750" e_stop="2842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTATAAATTTCATCAAGCTTGCAATTATATATACAATTACATCCGCCTCCAGCATACAGTATGTCATTGATCTTCTCTCTACTAGTATTATCAATGTCTCCTTCTGACAATTTATGCACGTACATTTCCTTTATGAGCTTTGCTGCTTATCATACTGAATTTTTGTTTGGGTTATCCTAGTTTACATGGTTGCATTTCCATACTATCAGACAACTTAATTTCCTCTTGCCAAATTCATGCTTCAGACCTATTATCTCCTCTAAAGTCCAGTGGCGGAGCCAAGAGTTTGGGAAAGAGTATGCAGATTTTCTTCTCAGTTGTGTTAAGGGTGTGCAAAATCAAACATACACTCATAATATCTCACAGTTAACATTTAACCTTTGTACACCACATAATATTTCAGCGAAGGGTGTGCACGGGACCATCCTTAGCCTAAGGTGGCCCAGCCAATGCTCTAAACTAATGAGGTTTTTATTTTACACTATCTTCTGAGATTCCTTTGACTGCTAACAGTTCATAAATAAACTTGTTAAGGATTCTTAAGGGTTCAAGAATTACCAAACAATATAGTCCGAACCGTACGAATCTAGCTATAAGCAGAGATTTGTATCCATGTCATCATTCTAATCAGATAACTAGAGGGGGATACAGAAGTATATGTCATAATTAGTGAAATTAGGATAGGTGTTCCATTATCAAGGAGATAAAAGTTCCATAACCAATGGGATTAGGAATATTAAAAAGGATACACAGTACTTAGTGTACATATAAAGTTGATATTGCTATCATATATTCTCAAAATTAAACTTACATTCGATGTATATTAGTGGATTAAGGGAATGTGTCCCTAAATGATTTTAGGAGTCCCATATAACCAATGAAATAAAGAATCATAGATAATAAGGCTATAATGCATAGCACATATACATAAGAATTGAGAGTTGTTACTCCTGTGCATTCTCAAACTATCTATTGGGAGGGTTTTTTCTAAAGCTGATATTAATAATGCATCCTCTAAATGCTTCCAGAGCTATCCAGAAATCAAACTGCTATCATGATCAAGGTCACAAGGCTACCTGTGGATATGAAAGTACTAGGTATATGGTAATATTTGGATTAATCCAAGTTATAGTGTCTCAAATTCCTGATTTTCCGAATATGAAGTGGCTCTCCGTAGTTGCTGCTGTCATGTCCTTCACATATTCAATTATCGGATCAGCACTTGGCTTAGCCAAAGTAATAGGTAGGTTACCTTTTTGCATGCTTTTAGAGTCCTAAAATCTTCACAATAACAAGCATGTTCAGGCCTAGAATCTCAGGTAATATAGATGATCAAACTTGTCATTATCTTAAAATTCCATTCCGCAATCTTGATATGCAGAAAATGGAGAAATCAAAGGAAGCATTACAGGACTGCCAAGTTCTACAGCTGCTGAGAAAGTATGGTTGGTTGCTCAAGCGCTCGGGAACATTGCCTTTGCCTTTCCATTCTCTCTTATATTTCTGGAGGTTCAGGTGCTGCAATTTGGCTTTCTAAATTAAATAATTTTCTTAATCAGCATTAAGCTGCACTAAACAATTAATGAAAACTTCCAAATATGTAGGACACATTAAAGGCACCTCCTCCAGAAAAGATCACCATGAAGAAGGTCTCAATTATGACATCCTGTATTACAACTTTTTTCTACCTTTGCTGT</genome_strand>
        <mrna_strand>TTCGTATAAATTTCATCAAGCTTGCAATTATATATACAATTACATCCGCCTCCAGCATACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTATCCAGAAATCAAACTGCTATCATGATCAAGGTCACAAGGCTACCTGTGGATATGAAAGTACTAGGTATATGGTAATATTTGGATTAATCCAAGTTATAGTGTCTCAAATTCCTGATTTTCCGAATATGAAGTGGCTCTCCGTAGTTGCTGCTGTCATGTCCTTCACATATTCAATTATCGGATCAGCACTTGGCTTAGCCAAAGTAATAG..........................................................................................................................................AAAATGGAGAAATCAAAGGAAGCATTACAGGACTGCCAAGTTCTACAGCTGCTGAGAAAGTATGGTTGGTTGCTCAAGCGCTCGGGAACATTGCCTTTGCCTTTCCATTCTCTCTTATATTTCTGGAGGTTCAG.........................................................................................GACACATTAAAGGCACCTCCTCCAGAAAAGATCACCATGAAGAAGGTCTCAATTATGACATCCTGTATTACAACTTTTTTCTACCTTTGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545084" ref_strand="+" ref_description="SGN-E545084 [TUS-67-M1](-)">
      <seq>aactcagaaaagaattgaaagttggaaaagcaaagctatcatgcttcgcgtctttacaatggtatgtctggttgtgatattgtacgcatttgttgggtctatcagaggagttattgttgctaggttcaggtaaaaatgcttcttcacgtttctacaaggtttgcgtacatgctatcctctccgaacccccacttgtgagattatactagatatgttatttaaaaaagaaatgtaaataaattctttatagttttaaaatgttcggtatgtaaacaatgccttacgttgtcaacaaccaaatatgtattataaaatttcatcgattttcgtgtactaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="3583" stop="4520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3883" g_stop="4220" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="339" polyA_stop="348"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E545084" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3883" e_stop="4220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTATA</genome_strand>
        <mrna_strand>AACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545085" ref_strand="+" ref_description="SGN-E545085 [TUS-67-M1]">
      <seq>aactcagaaaagaattgaaagttggaaaagcaaagctatcatgcttcgcgtctttacaatggtatgtctggttgtgatattgtacgcatttgttgggtctatcagaggagttattgttgctaggttcaggtaaaaatgcttcttcacgtttctacaaggtttgcgtacatgctatcctctccgaacccccacttgtgagattatactagatatgttatttaaaaaagaaatgtaaataaattctttatagttttaaaatgttcggtatgtaaacaatgccttacgttgtcaacaaccaaatatgtattataaaatttcatcgattttcgtgtactaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="3583" stop="4520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3883" g_stop="4220" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="339" polyA_stop="348"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E545085" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3883" e_stop="4220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTATA</genome_strand>
        <mrna_strand>AACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309731" ref_strand="+" ref_description="SGN-E309731 [cLEY-26-F7]">
      <seq>actcagaaaagaattgaaagttggaaaagcaaagctatcatgcttcgcgtctttacaatggtatgtctggttgtgatattgtacgcatttgttgggtctatcagaggagttattgttgctaggttcaggtaaaaatgcttcttcacgtttctacaaggtttgcgtacatgctatcctctccgaacccccacttgtgagattatactagatatgttatttaaaaaagaaatgtaaataaattctttatagttttaaaatgttcggtatgtaaacaatgccttacgttgtcaacaaccaaatatgtattataaaatttcatcgattttcgtgtactaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="3584" stop="4520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3884" g_stop="4220" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="338" polyA_stop="347"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E309731" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3884" e_stop="4220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTATA</genome_strand>
        <mrna_strand>ACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390316" ref_strand="+" ref_description="SGN-E390316 [TUS-17-G19](-)">
      <seq>cagataatcaagttgaggtaagggagcatgcggcagcagtcttggctggcctaatgaagggcggagatgaagatttagctcaggatttccgtcatagagcttatacagaagcaagtatcattcagaagaagaggaaacaaagaagcatgcgttctggattctctgtagcatccctacatggaaagatacttgctttggctgcttgcgtgctatcagttccttatgatattcccagttggttaccagaacaggttacactattggctcaatttgtttctgaatcatcacctgtaaaatctaccgtgacaaaagctgtggcagagtttcgacgcactcatgcggacacatggaatgttcagaaagattccttcactgaagaacaacttgaggtcctggctgatacatcatcatcctcatcatactttgcttgacattcatggtgtgccttacatgagagatagaattataccatatcatatatctcatatattgtaagtgggaagtctccaagtctaaagttgaactacaaaaatgctcatacaattttttattaaaaattttgttctacactaaaaattaaaagaaaaaacttttagacagaaaatcattcattttctacattgaatttgaacgtagaaaattgtgttgtcatcttcccacaattgttatgtttgatttgcttagttatcaccagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="13835" stop="8994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13535" g_stop="13519" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12670" g_stop="12546" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="142" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11563" g_stop="11471" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="235" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.713" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10147" g_stop="9994" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="389" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9601" g_stop="9286" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="705" r_length="316" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E390316" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13535" e_stop="13519"/>
          <exon e_start="12670" e_stop="12546"/>
          <exon e_start="11563" e_stop="11471"/>
          <exon e_start="10147" e_stop="9994"/>
          <exon e_start="9601" e_stop="9286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAGGTTCTTTTATTGTTTTAGTTTTACTCAATTTTGGCTAGTTATTATTACTATGCTTATATAATTTGTTGGGTTATTACTGATGATCATCCTAGAGAGGTCACATCTATCTGTATATTCTAACTCCATTTGCCTGGGATGGGCTTGTAACATTAATGATGATAACCTTAGAGAGATGAAGCCTGTCTTTATTATGTGAGATATGACATAAGGGGCTAACTCATCCCCAAAAACTAGCTCATGAGTGGAGGATTTTTCAAGTCCATATAAGCAAATCATTGTTTCCCTTCTCCAACCAATGTGGGACTTTAACACACTAAGTGCACCCTTCCACACCTAGGCCCAATTGGAGCATGGATCGGGAGCCCAAAGGGACCAGAGCGTAACTTAGTCCCAAAAGCTAACTCATGAGGGGAGGACTGCCAAGTCTAGACCACCGGTCCATTCCCCAACCGATGTGGGACTTTAACCCACTCTCACCATGCACCTGGCATGTTTTTGTTAAGTCCTTCCTGATGATCATTCTAGAGAGATCAAGCCTTTGTGCATATGAATTAACACCATGGTTTTGTTGCTCAAGATGTGTATATATATAATAATCATTTGCAATTCTACTAAAAGAATTCCTGTGAATTGTTTTGGTTTTGTAGTAGCTAATATTACGAAGATATTACACAAACATCAATTAAGCGACTAATTTGATTTGGATACCTAGGGCACCTAGAAAAGTGTGTTTCTATGTGTGGTTGGCAGCTAGGGGAGCGATACTGACAACCAAGAATCGTAGGAAGAGAAGGATCATACACATCACCGGATGTTGTATGTGTAGATTTTCTTGCAAACACAGTAGTGTTAGGATCCTTGTAAGATGAACAAGGATGATATAACTATCATTTTGTATTCCAAAACAAATGTTGTACTGATGGTTATATATTTACATATAATCAATGTGTTACCATTCTCAAAAATGAAATTGCTATTGCAGAAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAGGTACGTCCATTGTCTGATATAGTTTCATATATTCAAGATATATTTCACTATCAGTTTCTTATAATATTCCCAGGCACACCGCCCATTATATAACATAAATTCATATGTTCAAAGATATATATGACCAAGTGTTATCCTAGGAAGTTCCTGGAAGTAGCAATCCACTGCAGGAATGATAAACAGCATTTTAACTTGTCACAAAAGATGAAGTAAAATAAAACGAAATGTAACTTAAACTGCGTTTGAGATGACCCTGATGATTAGGGCCAGCAATCTGATAAAATATTAAATTGATCAACTTATGCTGGTCCAAATTAATTGAGTGTGTGGAGATCGTGCTTAATGTTTTGAAGTATTCTAGCAGACAGTTTCTTTCAAGCAGTCTTTACAAAAGTGTAGGATAATCATGTTTATGGATTTCACATCCTAAGTATGGGGTCATAATTGTCGCTAACACGACGTCAACTTTTTTTCCACATGGTATATTGCTTTTAATTTCCATTGTATATTACCTATTCAATTTTATTTTGTTATATCTACTTGAATGTAGCTTGACATTCTAAACTTTCAAATTAGGAGTTAGTAATTTTGTTAATACAAAAGAGTCAAGTTACTTTCCATGCATTACATTTTATTAGTCAAGTTTCATATGCCATTCAGTGTATTGAATAGTAGCTGCTAGCTAGTGTCTTTCTTTTTCGAATTTTTTGGTTTTGTATAACTAAGATTTGTTAAAAGAAATAAATATATAAGCAAATTTTTTCTTTAATTTAGAGACTTATAAGTTTTAATACTTGATGGAAATACTGTATTTGTCTCCTGTCTTGTTTTACGTGATGTTGTTTGATTATGCATGAAGTTTAAGAAAGAAATGAAGGAAGACTTTTGAAACTTGTTGTCTAAAACAAGCCAAAAATGTTTGTGAGGCTATAAAACGTCTCATCAGAAAACAAACAAATCAGTCTATTAGTTAAAGAGTGTATTGTGTTATTTCACTTTTGCTGTTAAAAGAAATATGTAAGTGACGCAGAAGCATCGCTAGAACTCATAGAGTTTCTTAAGGATTAGAAGAGGGCAATGTGCTTGCTTACTGTATAGAAATTCCAGCACTAACTTTGTGCTGTTTACAAATAAAATTATTACCTTTTCAAAATATAATTCTTTTAAAGTTATAACTTATTTCTACATGTACAAAGATATCATTATTCTTTTTGAGATGGTCCAAAGTAGTGTACTACTATTAATCTTTAGATATTTTCAGTAATATGGATTACTCTAGAGAAATGTTTCTCATTAGTGACAAATTGCCAAATTTTATCGCAGTTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAGGTATGGTTCGCACGTACATTTATTGTTATTTTGTACATTTCGCTGATGTAGGTTCCTCTCCAAACTAAATTCTTTAACCAAATATTGACATACAAGCAAGGGTAATGTCAAAATTTAGATCCATGGGTACGACCTTGTTGAGATCTTTTGGCCAAGAGGGCTCTGTATTAAATTCCATCCAAAACTGGTTACTTGTTTAATGTGAAAAAGAAGTTTTTTTCTGAAGCTCTATAGAAGACTTGAACTTTTTTTTTACATCAAATCCTAGTTCCATATGGGATTTGAGATTTTGGCAAGAGAATTAGAAGAATTGAGTTGTTCAGCAAGCCACCTCTTATAATTGATGATTGGTGTTTTCTTAGCTAACAAGATCATTTGTGACATCTTTGCAGGTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTTATGTTTGATTTGCTTAGTTATCACCAGTAATTATTTCA</genome_strand>
        <mrna_strand>CAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG........................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTTATGTTTGATTTGCTTAGTTATCACCAGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549408" ref_strand="+" ref_description="SGN-E549408 [TUS-70-C8](-)">
      <seq>caaacaacaaatttggcaaactgtcgagaagctactcgcagataatcaagttgaggtaagggagcatgcggcagcagtcttggctggcctaatgaagggcggagatgaagatttagctcaggatttccgtcatagagcttatacagaagcaaatatcattcagaagaagagaaaacaaagaagcatgcgttctggattctctgtagcatccctacatggaaagatacttgctttggctgcttgcgtgctatcagttccttatgatattcccagttggttaccagaaaacgttacactattggctcaatttgtttctgaatcatcacctgtaaaatctaccgtgacaaaagctgtggcagagtttcgacgcactcatgcggacacatggaatgttcagaaagattccttcactgaagaacaacttgaggtcctggctgatacatcatcatcctcatcatactttgcttgacattcatggtgtgccttacatgagagatagaattataccatatcatatatctcatatattgtaagtgggaagcttccaagtctaagttgaactacaaaatgctcatacaattttttattaaaaattttgttctacaccaaaaattaaaagaaaaaacttttagacagaaaatcattcattttctacattgaatttgaacgtagaaaattgtgtcatcttcccacaattgttaaatgtttatttcaattttaaggttttggtttttcatcttcaaaaaaaaaaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="13873" stop="8945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13573" g_stop="13519" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12670" g_stop="12546" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="180" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982">
            <donor d_prob="0.951" d_score="0.96"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11563" g_stop="11471" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="273" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.713" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10147" g_stop="9994" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="427" r_length="154" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9601" g_stop="9324" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="700" r_length="273" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="742" polyA_stop="763"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E549408" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13573" e_stop="13519"/>
          <exon e_start="12670" e_stop="12546"/>
          <exon e_start="11563" e_stop="11471"/>
          <exon e_start="10147" e_stop="9994"/>
          <exon e_start="9601" e_stop="9324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAGGTTCTTTTATTGTTTTAGTTTTACTCAATTTTGGCTAGTTATTATTACTATGCTTATATAATTTGTTGGGTTATTACTGATGATCATCCTAGAGAGGTCACATCTATCTGTATATTCTAACTCCATTTGCCTGGGATGGGCTTGTAACATTAATGATGATAACCTTAGAGAGATGAAGCCTGTCTTTATTATGTGAGATATGACATAAGGGGCTAACTCATCCCCAAAAACTAGCTCATGAGTGGAGGATTTTTCAAGTCCATATAAGCAAATCATTGTTTCCCTTCTCCAACCAATGTGGGACTTTAACACACTAAGTGCACCCTTCCACACCTAGGCCCAATTGGAGCATGGATCGGGAGCCCAAAGGGACCAGAGCGTAACTTAGTCCCAAAAGCTAACTCATGAGGGGAGGACTGCCAAGTCTAGACCACCGGTCCATTCCCCAACCGATGTGGGACTTTAACCCACTCTCACCATGCACCTGGCATGTTTTTGTTAAGTCCTTCCTGATGATCATTCTAGAGAGATCAAGCCTTTGTGCATATGAATTAACACCATGGTTTTGTTGCTCAAGATGTGTATATATATAATAATCATTTGCAATTCTACTAAAAGAATTCCTGTGAATTGTTTTGGTTTTGTAGTAGCTAATATTACGAAGATATTACACAAACATCAATTAAGCGACTAATTTGATTTGGATACCTAGGGCACCTAGAAAAGTGTGTTTCTATGTGTGGTTGGCAGCTAGGGGAGCGATACTGACAACCAAGAATCGTAGGAAGAGAAGGATCATACACATCACCGGATGTTGTATGTGTAGATTTTCTTGCAAACACAGTAGTGTTAGGATCCTTGTAAGATGAACAAGGATGATATAACTATCATTTTGTATTCCAAAACAAATGTTGTACTGATGGTTATATATTTACATATAATCAATGTGTTACCATTCTCAAAAATGAAATTGCTATTGCAGAAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAGGTACGTCCATTGTCTGATATAGTTTCATATATTCAAGATATATTTCACTATCAGTTTCTTATAATATTCCCAGGCACACCGCCCATTATATAACATAAATTCATATGTTCAAAGATATATATGACCAAGTGTTATCCTAGGAAGTTCCTGGAAGTAGCAATCCACTGCAGGAATGATAAACAGCATTTTAACTTGTCACAAAAGATGAAGTAAAATAAAACGAAATGTAACTTAAACTGCGTTTGAGATGACCCTGATGATTAGGGCCAGCAATCTGATAAAATATTAAATTGATCAACTTATGCTGGTCCAAATTAATTGAGTGTGTGGAGATCGTGCTTAATGTTTTGAAGTATTCTAGCAGACAGTTTCTTTCAAGCAGTCTTTACAAAAGTGTAGGATAATCATGTTTATGGATTTCACATCCTAAGTATGGGGTCATAATTGTCGCTAACACGACGTCAACTTTTTTTCCACATGGTATATTGCTTTTAATTTCCATTGTATATTACCTATTCAATTTTATTTTGTTATATCTACTTGAATGTAGCTTGACATTCTAAACTTTCAAATTAGGAGTTAGTAATTTTGTTAATACAAAAGAGTCAAGTTACTTTCCATGCATTACATTTTATTAGTCAAGTTTCATATGCCATTCAGTGTATTGAATAGTAGCTGCTAGCTAGTGTCTTTCTTTTTCGAATTTTTTGGTTTTGTATAACTAAGATTTGTTAAAAGAAATAAATATATAAGCAAATTTTTTCTTTAATTTAGAGACTTATAAGTTTTAATACTTGATGGAAATACTGTATTTGTCTCCTGTCTTGTTTTACGTGATGTTGTTTGATTATGCATGAAGTTTAAGAAAGAAATGAAGGAAGACTTTTGAAACTTGTTGTCTAAAACAAGCCAAAAATGTTTGTGAGGCTATAAAACGTCTCATCAGAAAACAAACAAATCAGTCTATTAGTTAAAGAGTGTATTGTGTTATTTCACTTTTGCTGTTAAAAGAAATATGTAAGTGACGCAGAAGCATCGCTAGAACTCATAGAGTTTCTTAAGGATTAGAAGAGGGCAATGTGCTTGCTTACTGTATAGAAATTCCAGCACTAACTTTGTGCTGTTTACAAATAAAATTATTACCTTTTCAAAATATAATTCTTTTAAAGTTATAACTTATTTCTACATGTACAAAGATATCATTATTCTTTTTGAGATGGTCCAAAGTAGTGTACTACTATTAATCTTTAGATATTTTCAGTAATATGGATTACTCTAGAGAAATGTTTCTCATTAGTGACAAATTGCCAAATTTTATCGCAGTTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAGGTATGGTTCGCACGTACATTTATTGTTATTTTGTACATTTCGCTGATGTAGGTTCCTCTCCAAACTAAATTCTTTAACCAAATATTGACATACAAGCAAGGGTAATGTCAAAATTTAGATCCATGGGTACGACCTTGTTGAGATCTTTTGGCCAAGAGGGCTCTGTATTAAATTCCATCCAAAACTGGTTACTTGTTTAATGTGAAAAAGAAGTTTTTTTCTGAAGCTCTATAGAAGACTTGAACTTTTTTTTTACATCAAATCCTAGTTCCATATGGGATTTGAGATTTTGGCAAGAGAATTAGAAGAATTGAGTTGTTCAGCAAGCCACCTCTTATAATTGATGATTGGTGTTTTCTTAGCTAACAAGATCATTTGTGACATCTTTGCAGGTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTT</genome_strand>
        <mrna_strand>CAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAATATCATTCAGAAGAAGAGAAAACAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTACCAGAAAACGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG........................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGCTTCCAAGTCT-AAGTTGAACTAC-AAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACCAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAA-T-TG-TGTCATCTTCCCACAATTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303313" ref_strand="+" ref_description="SGN-E303313 [cLEX-2-I11]">
      <seq>tttgtcgacactggccaaaatagcttttgaattgctaaagtggagagtttattcagagtcccatttaaggaaagttgtgctcaccattctttctatagccaatgataccaattggcgtacaagatctacgactctgacctatttacggagtttcatgtataggcacactttcgtcctctctaaggtggacaaacaacaaatttggcaaactgtcgagaagctactcgcagataatcaagttgaggtaagggagcatgcggcagcagtcttggctggcctaatgaagggcggagatgaagatttagctcaggatttccgtcatagagcttatacagaagcaagtatcattcagaagaagaggaaacaaagaagcatgcgttctggattctctgtagcatccctacatggaaagatacttgctttggctgcttgcgtgctatcagttccttatgatattcccagttggttaccagaacaggttacactattggctcaatttgtttctgaatcatcacctgtaaaatctaccgtgacaaaagctgtggcagagtttcgacgcactcatgcggacacatggaatgttcagaaagattccttcactgaagaacaacttgaggtcctggctgatacatcatcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="14314" stop="9279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14014" g_stop="13853" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13600" g_stop="13519" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="244" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12670" g_stop="12546" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="369" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11563" g_stop="11471" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="462" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.713" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10147" g_stop="9994" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="616" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9601" g_stop="9579" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="639" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E303313" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14014" e_stop="13853"/>
          <exon e_start="13600" e_stop="13519"/>
          <exon e_start="12670" e_stop="12546"/>
          <exon e_start="11563" e_stop="11471"/>
          <exon e_start="10147" e_stop="9994"/>
          <exon e_start="9601" e_stop="9579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAGGTTCTTTTATTGTTTTAGTTTTACTCAATTTTGGCTAGTTATTATTACTATGCTTATATAATTTGTTGGGTTATTACTGATGATCATCCTAGAGAGGTCACATCTATCTGTATATTCTAACTCCATTTGCCTGGGATGGGCTTGTAACATTAATGATGATAACCTTAGAGAGATGAAGCCTGTCTTTATTATGTGAGATATGACATAAGGGGCTAACTCATCCCCAAAAACTAGCTCATGAGTGGAGGATTTTTCAAGTCCATATAAGCAAATCATTGTTTCCCTTCTCCAACCAATGTGGGACTTTAACACACTAAGTGCACCCTTCCACACCTAGGCCCAATTGGAGCATGGATCGGGAGCCCAAAGGGACCAGAGCGTAACTTAGTCCCAAAAGCTAACTCATGAGGGGAGGACTGCCAAGTCTAGACCACCGGTCCATTCCCCAACCGATGTGGGACTTTAACCCACTCTCACCATGCACCTGGCATGTTTTTGTTAAGTCCTTCCTGATGATCATTCTAGAGAGATCAAGCCTTTGTGCATATGAATTAACACCATGGTTTTGTTGCTCAAGATGTGTATATATATAATAATCATTTGCAATTCTACTAAAAGAATTCCTGTGAATTGTTTTGGTTTTGTAGTAGCTAATATTACGAAGATATTACACAAACATCAATTAAGCGACTAATTTGATTTGGATACCTAGGGCACCTAGAAAAGTGTGTTTCTATGTGTGGTTGGCAGCTAGGGGAGCGATACTGACAACCAAGAATCGTAGGAAGAGAAGGATCATACACATCACCGGATGTTGTATGTGTAGATTTTCTTGCAAACACAGTAGTGTTAGGATCCTTGTAAGATGAACAAGGATGATATAACTATCATTTTGTATTCCAAAACAAATGTTGTACTGATGGTTATATATTTACATATAATCAATGTGTTACCATTCTCAAAAATGAAATTGCTATTGCAGAAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAGGTACGTCCATTGTCTGATATAGTTTCATATATTCAAGATATATTTCACTATCAGTTTCTTATAATATTCCCAGGCACACCGCCCATTATATAACATAAATTCATATGTTCAAAGATATATATGACCAAGTGTTATCCTAGGAAGTTCCTGGAAGTAGCAATCCACTGCAGGAATGATAAACAGCATTTTAACTTGTCACAAAAGATGAAGTAAAATAAAACGAAATGTAACTTAAACTGCGTTTGAGATGACCCTGATGATTAGGGCCAGCAATCTGATAAAATATTAAATTGATCAACTTATGCTGGTCCAAATTAATTGAGTGTGTGGAGATCGTGCTTAATGTTTTGAAGTATTCTAGCAGACAGTTTCTTTCAAGCAGTCTTTACAAAAGTGTAGGATAATCATGTTTATGGATTTCACATCCTAAGTATGGGGTCATAATTGTCGCTAACACGACGTCAACTTTTTTTCCACATGGTATATTGCTTTTAATTTCCATTGTATATTACCTATTCAATTTTATTTTGTTATATCTACTTGAATGTAGCTTGACATTCTAAACTTTCAAATTAGGAGTTAGTAATTTTGTTAATACAAAAGAGTCAAGTTACTTTCCATGCATTACATTTTATTAGTCAAGTTTCATATGCCATTCAGTGTATTGAATAGTAGCTGCTAGCTAGTGTCTTTCTTTTTCGAATTTTTTGGTTTTGTATAACTAAGATTTGTTAAAAGAAATAAATATATAAGCAAATTTTTTCTTTAATTTAGAGACTTATAAGTTTTAATACTTGATGGAAATACTGTATTTGTCTCCTGTCTTGTTTTACGTGATGTTGTTTGATTATGCATGAAGTTTAAGAAAGAAATGAAGGAAGACTTTTGAAACTTGTTGTCTAAAACAAGCCAAAAATGTTTGTGAGGCTATAAAACGTCTCATCAGAAAACAAACAAATCAGTCTATTAGTTAAAGAGTGTATTGTGTTATTTCACTTTTGCTGTTAAAAGAAATATGTAAGTGACGCAGAAGCATCGCTAGAACTCATAGAGTTTCTTAAGGATTAGAAGAGGGCAATGTGCTTGCTTACTGTATAGAAATTCCAGCACTAACTTTGTGCTGTTTACAAATAAAATTATTACCTTTTCAAAATATAATTCTTTTAAAGTTATAACTTATTTCTACATGTACAAAGATATCATTATTCTTTTTGAGATGGTCCAAAGTAGTGTACTACTATTAATCTTTAGATATTTTCAGTAATATGGATTACTCTAGAGAAATGTTTCTCATTAGTGACAAATTGCCAAATTTTATCGCAGTTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAGGTATGGTTCGCACGTACATTTATTGTTATTTTGTACATTTCGCTGATGTAGGTTCCTCTCCAAACTAAATTCTTTAACCAAATATTGACATACAAGCAAGGGTAATGTCAAAATTTAGATCCATGGGTACGACCTTGTTGAGATCTTTTGGCCAAGAGGGCTCTGTATTAAATTCCATCCAAAACTGGTTACTTGTTTAATGTGAAAAAGAAGTTTTTTTCTGAAGCTCTATAGAAGACTTGAACTTTTTTTTTACATCAAATCCTAGTTCCATATGGGATTTGAGATTTTGGCAAGAGAATTAGAAGAATTGAGTTGTTCAGCAAGCCACCTCTTATAATTGATGATTGGTGTTTTCTTAGCTAACAAGATCATTTGTGACATCTTTGCAGGTCCTGGCTGATACATCATCATC</genome_strand>
        <mrna_strand>TTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG........................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGGCTGATACATCATCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209131" ref_strand="+" ref_description="SGN-E209131 [cLEC-38-E18]">
      <seq>tatcttgttgcaccatacaggcacactttcgtcctctctaaggtggacaaacaacaaatttggcaaactgtcgagaagctactcgcagataatcaagttgaggtaagggagcatgcggcagcagtcttggctggcctaatgaagggcggagatgaagatttagctcaggatttccgtcatagagcttatacagaagcaagtatcattcagaagaagaggaaacaaagaagcatgcgttctggattctctgtagcatccctacatggaaagatacttgctttggctgcttgcgtgctatcagttccttatgatattcccagttggttaccagaacaggttacactattggctcaatttgtttctgaatcatcacctgtaaaatctaccgtgacaaaagctgtggcagagtttcgacgcactcatgcggacacatggaatgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="13920" stop="9726"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13620" g_stop="13519" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12670" g_stop="12546" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="227" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11563" g_stop="11471" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="320" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.713" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10147" g_stop="10026" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="442" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E209131" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13620" e_stop="13519"/>
          <exon e_start="12670" e_stop="12546"/>
          <exon e_start="11563" e_stop="11471"/>
          <exon e_start="10147" e_stop="10026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAGGTTCTTTTATTGTTTTAGTTTTACTCAATTTTGGCTAGTTATTATTACTATGCTTATATAATTTGTTGGGTTATTACTGATGATCATCCTAGAGAGGTCACATCTATCTGTATATTCTAACTCCATTTGCCTGGGATGGGCTTGTAACATTAATGATGATAACCTTAGAGAGATGAAGCCTGTCTTTATTATGTGAGATATGACATAAGGGGCTAACTCATCCCCAAAAACTAGCTCATGAGTGGAGGATTTTTCAAGTCCATATAAGCAAATCATTGTTTCCCTTCTCCAACCAATGTGGGACTTTAACACACTAAGTGCACCCTTCCACACCTAGGCCCAATTGGAGCATGGATCGGGAGCCCAAAGGGACCAGAGCGTAACTTAGTCCCAAAAGCTAACTCATGAGGGGAGGACTGCCAAGTCTAGACCACCGGTCCATTCCCCAACCGATGTGGGACTTTAACCCACTCTCACCATGCACCTGGCATGTTTTTGTTAAGTCCTTCCTGATGATCATTCTAGAGAGATCAAGCCTTTGTGCATATGAATTAACACCATGGTTTTGTTGCTCAAGATGTGTATATATATAATAATCATTTGCAATTCTACTAAAAGAATTCCTGTGAATTGTTTTGGTTTTGTAGTAGCTAATATTACGAAGATATTACACAAACATCAATTAAGCGACTAATTTGATTTGGATACCTAGGGCACCTAGAAAAGTGTGTTTCTATGTGTGGTTGGCAGCTAGGGGAGCGATACTGACAACCAAGAATCGTAGGAAGAGAAGGATCATACACATCACCGGATGTTGTATGTGTAGATTTTCTTGCAAACACAGTAGTGTTAGGATCCTTGTAAGATGAACAAGGATGATATAACTATCATTTTGTATTCCAAAACAAATGTTGTACTGATGGTTATATATTTACATATAATCAATGTGTTACCATTCTCAAAAATGAAATTGCTATTGCAGAAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAGGTACGTCCATTGTCTGATATAGTTTCATATATTCAAGATATATTTCACTATCAGTTTCTTATAATATTCCCAGGCACACCGCCCATTATATAACATAAATTCATATGTTCAAAGATATATATGACCAAGTGTTATCCTAGGAAGTTCCTGGAAGTAGCAATCCACTGCAGGAATGATAAACAGCATTTTAACTTGTCACAAAAGATGAAGTAAAATAAAACGAAATGTAACTTAAACTGCGTTTGAGATGACCCTGATGATTAGGGCCAGCAATCTGATAAAATATTAAATTGATCAACTTATGCTGGTCCAAATTAATTGAGTGTGTGGAGATCGTGCTTAATGTTTTGAAGTATTCTAGCAGACAGTTTCTTTCAAGCAGTCTTTACAAAAGTGTAGGATAATCATGTTTATGGATTTCACATCCTAAGTATGGGGTCATAATTGTCGCTAACACGACGTCAACTTTTTTTCCACATGGTATATTGCTTTTAATTTCCATTGTATATTACCTATTCAATTTTATTTTGTTATATCTACTTGAATGTAGCTTGACATTCTAAACTTTCAAATTAGGAGTTAGTAATTTTGTTAATACAAAAGAGTCAAGTTACTTTCCATGCATTACATTTTATTAGTCAAGTTTCATATGCCATTCAGTGTATTGAATAGTAGCTGCTAGCTAGTGTCTTTCTTTTTCGAATTTTTTGGTTTTGTATAACTAAGATTTGTTAAAAGAAATAAATATATAAGCAAATTTTTTCTTTAATTTAGAGACTTATAAGTTTTAATACTTGATGGAAATACTGTATTTGTCTCCTGTCTTGTTTTACGTGATGTTGTTTGATTATGCATGAAGTTTAAGAAAGAAATGAAGGAAGACTTTTGAAACTTGTTGTCTAAAACAAGCCAAAAATGTTTGTGAGGCTATAAAACGTCTCATCAGAAAACAAACAAATCAGTCTATTAGTTAAAGAGTGTATTGTGTTATTTCACTTTTGCTGTTAAAAGAAATATGTAAGTGACGCAGAAGCATCGCTAGAACTCATAGAGTTTCTTAAGGATTAGAAGAGGGCAATGTGCTTGCTTACTGTATAGAAATTCCAGCACTAACTTTGTGCTGTTTACAAATAAAATTATTACCTTTTCAAAATATAATTCTTTTAAAGTTATAACTTATTTCTACATGTACAAAGATATCATTATTCTTTTTGAGATGGTCCAAAGTAGTGTACTACTATTAATCTTTAGATATTTTCAGTAATATGGATTACTCTAGAGAAATGTTTCTCATTAGTGACAAATTGCCAAATTTTATCGCAGTTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTC</genome_strand>
        <mrna_strand>TATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E703777" ref_strand="+" ref_description="SGN-E703777 [FA22BG06]">
      <seq>ctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggagacgtcaaataaggatttgtcgacactggccaaaatagcttttgaattgctaaagtggagagtttattcagagtcccatttaaggaaagttgtgctcaccattctttctatagccaatgataccaattggcgtacaagatctacgactctgacctatttacggagtttcatgtataggcacactttcgtcctctctaaggtggacaaacaacaaatttggcaaactgtcgagaagctactcgcagataatcaagttgaggtaagggagcatgcggcagcagtcttggctggcctaatgaagggcggagatgaagatttagctcaggatttccgtcatagagcttatacagaagcaagtatcattcagaagaagaggaaacaaagaagcatgcgttctggattctctgtagcatccctacatggaaagatacttgctttggctgcttgcgtgctatcagttccttatgatattcccagttggttaccagaacaggttacactattggctcaatttgtttctgaatcatcacctgtaaaatctaccgtgacaaaagctgtggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16176" stop="9764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15876" g_stop="15657" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="316" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="495" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13600" g_stop="13519" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="577" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12670" g_stop="12546" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="702" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11563" g_stop="11471" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="795" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.713" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10147" g_stop="10064" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="879" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E703777" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15876" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13853"/>
          <exon e_start="13600" e_stop="13519"/>
          <exon e_start="12670" e_stop="12546"/>
          <exon e_start="11563" e_stop="11471"/>
          <exon e_start="10147" e_stop="10064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAGGTTCTTTTATTGTTTTAGTTTTACTCAATTTTGGCTAGTTATTATTACTATGCTTATATAATTTGTTGGGTTATTACTGATGATCATCCTAGAGAGGTCACATCTATCTGTATATTCTAACTCCATTTGCCTGGGATGGGCTTGTAACATTAATGATGATAACCTTAGAGAGATGAAGCCTGTCTTTATTATGTGAGATATGACATAAGGGGCTAACTCATCCCCAAAAACTAGCTCATGAGTGGAGGATTTTTCAAGTCCATATAAGCAAATCATTGTTTCCCTTCTCCAACCAATGTGGGACTTTAACACACTAAGTGCACCCTTCCACACCTAGGCCCAATTGGAGCATGGATCGGGAGCCCAAAGGGACCAGAGCGTAACTTAGTCCCAAAAGCTAACTCATGAGGGGAGGACTGCCAAGTCTAGACCACCGGTCCATTCCCCAACCGATGTGGGACTTTAACCCACTCTCACCATGCACCTGGCATGTTTTTGTTAAGTCCTTCCTGATGATCATTCTAGAGAGATCAAGCCTTTGTGCATATGAATTAACACCATGGTTTTGTTGCTCAAGATGTGTATATATATAATAATCATTTGCAATTCTACTAAAAGAATTCCTGTGAATTGTTTTGGTTTTGTAGTAGCTAATATTACGAAGATATTACACAAACATCAATTAAGCGACTAATTTGATTTGGATACCTAGGGCACCTAGAAAAGTGTGTTTCTATGTGTGGTTGGCAGCTAGGGGAGCGATACTGACAACCAAGAATCGTAGGAAGAGAAGGATCATACACATCACCGGATGTTGTATGTGTAGATTTTCTTGCAAACACAGTAGTGTTAGGATCCTTGTAAGATGAACAAGGATGATATAACTATCATTTTGTATTCCAAAACAAATGTTGTACTGATGGTTATATATTTACATATAATCAATGTGTTACCATTCTCAAAAATGAAATTGCTATTGCAGAAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAGGTACGTCCATTGTCTGATATAGTTTCATATATTCAAGATATATTTCACTATCAGTTTCTTATAATATTCCCAGGCACACCGCCCATTATATAACATAAATTCATATGTTCAAAGATATATATGACCAAGTGTTATCCTAGGAAGTTCCTGGAAGTAGCAATCCACTGCAGGAATGATAAACAGCATTTTAACTTGTCACAAAAGATGAAGTAAAATAAAACGAAATGTAACTTAAACTGCGTTTGAGATGACCCTGATGATTAGGGCCAGCAATCTGATAAAATATTAAATTGATCAACTTATGCTGGTCCAAATTAATTGAGTGTGTGGAGATCGTGCTTAATGTTTTGAAGTATTCTAGCAGACAGTTTCTTTCAAGCAGTCTTTACAAAAGTGTAGGATAATCATGTTTATGGATTTCACATCCTAAGTATGGGGTCATAATTGTCGCTAACACGACGTCAACTTTTTTTCCACATGGTATATTGCTTTTAATTTCCATTGTATATTACCTATTCAATTTTATTTTGTTATATCTACTTGAATGTAGCTTGACATTCTAAACTTTCAAATTAGGAGTTAGTAATTTTGTTAATACAAAAGAGTCAAGTTACTTTCCATGCATTACATTTTATTAGTCAAGTTTCATATGCCATTCAGTGTATTGAATAGTAGCTGCTAGCTAGTGTCTTTCTTTTTCGAATTTTTTGGTTTTGTATAACTAAGATTTGTTAAAAGAAATAAATATATAAGCAAATTTTTTCTTTAATTTAGAGACTTATAAGTTTTAATACTTGATGGAAATACTGTATTTGTCTCCTGTCTTGTTTTACGTGATGTTGTTTGATTATGCATGAAGTTTAAGAAAGAAATGAAGGAAGACTTTTGAAACTTGTTGTCTAAAACAAGCCAAAAATGTTTGTGAGGCTATAAAACGTCTCATCAGAAAACAAACAAATCAGTCTATTAGTTAAAGAGTGTATTGTGTTATTTCACTTTTGCTGTTAAAAGAAATATGTAAGTGACGCAGAAGCATCGCTAGAACTCATAGAGTTTCTTAAGGATTAGAAGAGGGCAATGTGCTTGCTTACTGTATAGAAATTCCAGCACTAACTTTGTGCTGTTTACAAATAAAATTATTACCTTTTCAAAATATAATTCTTTTAAAGTTATAACTTATTTCTACATGTACAAAGATATCATTATTCTTTTTGAGATGGTCCAAAGTAGTGTACTACTATTAATCTTTAGATATTTTCAGTAATATGGATTACTCTAGAGAAATGTTTCTCATTAGTGACAAATTGCCAAATTTTATCGCAGTTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGC</genome_strand>
        <mrna_strand>CTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E607089" ref_strand="+" ref_description="SGN-E607089 [23047]">
      <seq>cacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagttcatccacatgaagtagggacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagattcaaagttttagccagtcagatactctggatgtgcaatcggacataatttctgacaatggagtatcaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctcttcaggagacgtcaaataaggatttgtcgaccctggccaaagtagcttttgaattgctaaagtggagagtttattcagagtcccatttaaggaaagttgtactcaccattctttctatagccaatgataccaattggcgcacaagatctacgactctgacctatttgcggagtttcatgtataggcacactttcgtcctctctaaggtggacaaacaacaaatttggcaaactgttgagaagctactcacagataatcaagttgaggtaagagagcatgcggcagcagtcttggctggcctaattgaagggtggagatgaggatttagccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16242" stop="12307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15943" g_stop="15657" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="383" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="562" r_length="179" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13600" g_stop="13519" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="644" r_length="82" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12670" g_stop="12607" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="709" r_length="65" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E607089" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E607089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15943" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13853"/>
          <exon e_start="13600" e_stop="13519"/>
          <exon e_start="12670" e_stop="12607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAA-TGAAGGGCGGAGATGAAGATTTAGCTC</genome_strand>
        <mrna_strand>CACAAGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGTTCATCCACATGAAGTAGGGACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATTCAAAGTTTTAGCCAGTCAGATACTCTGGATGTGCAATCGGACATAATTTCTGACAATGGAGTATCAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACCCTGGCCAAAGTAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTACTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGCACAAGATCTACGACTCTGACCTATTTGCGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTTGAGAAGCTACTCACAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATTGAAGGGTGGAGATGAGGATTTAGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401723" ref_strand="+" ref_description="SGN-E401723 [PPC-5-I17]">
      <seq>caggtgtcctgcaatcaagttcatccacatgaagtagggacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagattcaaagttttagccagtcagatactctggatgtgcaatcggacataatttctgacaatggagtatcaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctcttcaggagacgtcaaataaggatttgtcgaccctggccaaagtagcttttgaattgctaaagtggagagtttattcagagtcccatttaaggaaagttgtactcaccattctttctatagccaatgataccaattggcgcacaagatctacgactctgacctatttgcggagtttcatgtataggcacactttcgtcctctctaaggtggacaaacaacaaatttggcaaactgttgagaagctactcacagataatcaagttgaggtaagagagcatgcggcagcagtcttggctggcctaatggagggtggagatgagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16184" stop="12315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15884" g_stop="15657" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="324" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="503" r_length="179" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13600" g_stop="13519" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="585" r_length="82" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12670" g_stop="12615" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="641" r_length="56" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E401723" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15884" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13853"/>
          <exon e_start="13600" e_stop="13519"/>
          <exon e_start="12670" e_stop="12615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGA</genome_strand>
        <mrna_strand>CAGGTGTCCTGCAATCAAGTTCATCCACATGAAGTAGGGACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATTCAAAGTTTTAGCCAGTCAGATACTCTGGATGTGCAATCGGACATAATTTCTGACAATGGAGTATCAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACCCTGGCCAAAGTAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTACTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGCACAAGATCTACGACTCTGACCTATTTGCGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTTGAGAAGCTACTCACAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGGAGGGTGGAGATGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E606995" ref_strand="+" ref_description="SGN-E606995 [22951]">
      <seq>ttacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagttcatccacatgaagtaggacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagattcaaagttttagccagtcagatactctggatgtgcaatcggacataatttctgacaatggagtatcaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctcttcaggagacgtcaaataaggatttgtcgaccctggccaaagtagcttttgaattgctaaagtggagagtttattcagagtcccatttaaggaaagttgtactcaccattctttctatagccaatgataccaattggcgcacaagatctacgactctgacctatttgcggagtttcatgtataggcacactttcgtcctctctaaggtggacaaacaacaaatttggcaaactgttgagaagctactcacagataatcaagttgaggtaagagagcatgcggcagcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16242" stop="12348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15944" g_stop="15657" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="383" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="562" r_length="179" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13600" g_stop="13519" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="644" r_length="82" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12670" g_stop="12648" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="667" r_length="23" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E606995" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E606995" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15944" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13853"/>
          <exon e_start="13600" e_stop="13519"/>
          <exon e_start="12670" e_stop="12648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAGGTAAGTTCACATAAATGTTAGCTGAAATATTTGCGGTATCAACTATGTAAATAATTAAAATGTTGTGCATTACCATATGATGTCTAGTCTTGGAGAAAGTAAGTGGATCTCTTGATGCTCTTTGCTTGTTTTGTTCAATGGTTGATATACAACAAATATATTATTGATTTCTCAAACCCCATATCCCTATAATAATGGTGAAGTAAGGGGTGGACCCAAAGGGAATTAACTGGTGGTTCTTGCTCGTAGCTTATTTAGGTAGCTTTTTTTGCCTTTTTAATTTCCTAAACTTACTGGATCATGTTTGATTACATAGAAGAGGAAAGGCTAGGATAATATACAATTTACCTCTTTGTCTATCCTATCATATGTTTGATGCACCAAAAGACAACCTTTTTTCAAAGATCACTCCTGCTTATCCTATGTCAGTATGTCTTGTTTAATTCTTTATAGTATTATCAAAGTCATCCATTTCTTATGGCCGTTCCTCTTCTATTGCTGTAGCCTGTAAGTGTGTCATGTGCTTAATATAGGACCATGAACTTATAGGTAGTAGATGTTATGTGTTTGATTGTAGACCTTTTTCAACCCTTCCTGTTCTGATCTAGTGAGATTATTATGCTTTTAAGTTGCTTGGTGTCTGAAAGTTTTTTAGTTTGAACGTACAATTGATTATCGCACCCCCATTTACTTAAGGCTTCATGCTCCCATTACTAAGTGGTGGTTCAAGTAGTCATTTAATATCCTTTCGATGATAAAAATAGCTTTAGTTCTCCCTGATTACTTAAATATGGAGATTATGGTGATTTAAAGAAGCTCATTTGAATTCTTCTGAATATTTTGGTCAGGTAAGGGAGCATGCGGCAGCAGT</genome_strand>
        <mrna_strand>TTACAAGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGTTCATCCACATGAAGTAGG-ACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATTCAAAGTTTTAGCCAGTCAGATACTCTGGATGTGCAATCGGACATAATTTCTGACAATGGAGTATCAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACCCTGGCCAAAGTAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTACTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGCACAAGATCTACGACTCTGACCTATTTGCGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTTGAGAAGCTACTCACAGATAATCAAGTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGAGCATGCGGCAGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E262894" ref_strand="+" ref_description="SGN-E262894 [cLEG-59-F19]">
      <seq>tccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggttagttgcaacatcacatcattcccgttgcttgtcttttcagttgttttgacattttgaagggatgaaattactgtctgaagaacttggcatatacacactttccctccatttacggatgaaaatggagacgtcaaataaggatttgtcgacactggccaaaatagcttttgaattgctaaagtggagagtttattcagagtcccatttaaaggaaagttgtgctcaccattctttctatagccaatgataccaattggcgtacaagatctacgactctgacctatttacggagtttcatgtataggcacactttcgtcctctctaaagtgacaaacacaaatttggcaaactgtcgagaagctactcgcagataatcaagttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16242" stop="13219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="289" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15357" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="512" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15356" i_stop="14032" i_length="1325">
            <donor d_prob="0.590" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="692" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13600" g_stop="13519" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="772" r_length="80" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E262894" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15357"/>
          <exon e_start="14031" e_stop="13853"/>
          <exon e_start="13600" e_stop="13519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTT-AAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG</genome_strand>
        <mrna_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAAGT-GACAAAC-ACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265872" ref_strand="+" ref_description="SGN-E265872 [cLEI-11-H3]">
      <seq>ctcatccacatgaagtaggaacaagtaatgtgaacaggggagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggagacgtcaaataaggatttgtcgacactggccaaaatagcttttgaattgctaaagtggagagtttattcagagtcccatttaaggaaagttgtgctcaccattctttctatagccaatgataccaattggcgtacaagatctacgactctgacctatttacggagtttcatgtataggcacactttcgtcctctctaaggtggacaaacaacaaatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16165" stop="13258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15865" g_stop="15657" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="305" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="484" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13600" g_stop="13558" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="527" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E265872" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15865" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13853"/>
          <exon e_start="13600" e_stop="13558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAGGTATGATCTTTCCGTTTTGATCTTCCCTCCTCTCTCCTCCTTCGGTGAAAAAAAGTCATTTTGGTTCTTGAAGAGAAAATGAGGTACTTTGAAAGAAACAAGTATTGTTATCATCACTCTACACTGAATCATTGTTATTTTTATTTCAAACTCAGTCTTCAGGTGTTGCGGTGGTCTAGAATAGCTAAGTGATGCAAAAATAAACTTGTAATATCCTGAATAAATGAGTTGCTATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGG</genome_strand>
        <mrna_strand>CTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGGGAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG............................................................................................................................................................................................................................................................GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726377" ref_strand="+" ref_description="SGN-E726377 [LA11CF01]">
      <seq>cgcctattttcagagtattattcaagcaccaacagttgagtccatacctgagtgggctgcttgtattcgttatgcagttactggaaaaggaaaacatggaacaaaaattccactcttgagacaaaaggtcatggactgtttaatgaaccccttgcctgaaacagttagtactactgtagttgccaagcgatacatgtttctttcagctgcactaatagaagtttccccaccaaaaatgccagttactgaactagcgcttcactataagcttcttgaagaattgcttggcagtatgagccattcatctccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggagacgtcaaataaggatttgtcgacactggccaaaatagcttttgaattgctanagtggagagtttattcagagtcccatttaaggaaagttgtgctcaccattctttctatagccaatgataccaattggcgtacaagatctacgactctgacctatttacggagtttcatgtataggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17466" stop="13552"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17168" g_stop="16856" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16855" i_stop="15939" i_length="917">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="595" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="691" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14031" g_stop="13853" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="870" r_length="179" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E726377" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17168" e_stop="16856"/>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAAGTGAGTATTCAACGTTTCAATTTTCTGCTTAGGATCACAATTTATCATTTTCAGTTTCTCTATTATTTTTCTGGTTATGCTAAGAGTTGCTTGGTTACATGAGCCATTTGATATTTGATTTGATTGTCAAAGGAAGCATACGTTTATCTGTCGATCAACTCAAATCGCATACCTCTTTGATGAATTGCTTTGCTTGATAGGACTTTCCTTCTCGATCAGTTTTAGTTTTACAAGTTGAACTGGTTCTTCTCAGTTGTTCTACTGGAAAGACAAGCTTGTTAGTCTCAGCTTTTCCAGATCAATAGGTTCAGCTCTGAGCATCATTGTTGGGTCCCTTCTAAGATCTTCTAAAATATATTTTTCAATAACCTTTTTGCTCCTCATGGTTATGGATCCACATCTGATCTTGATCCCATTTTTTTTGTGCTTCCTCTCTTTTAATCTCGAAGGCATTATGGCCCCCACGTACATTCTCTTTGACCATTCTTCTTTTCAAGTTGTACATACATTGAGGCTATATCTTTGAGCTGATCTCGACTTCATAGTTTCATTACATTCCTTGTATCCAAAGTTGTTGAACTTTGAGGATCAAAAAGGTATTCTTTGACTCCTGTTCACCAAGAAAGATCTTTGACTACAACTTTTAATGTATAATGTCATCACTTATTTTGTTTTTGTTTAAGATTATTTTTTCATTTGTAAACGAGAACATTGTTACTTACTGTTCTTCATATCTAGTTTCTAACAAAAAGTTTATCTTTCAAAGACAAATTAATCTATGTTTAAGGGAAATTGATAAAATTGACCACCCCAGAAAAAGGAGTGGATCCTTTCACAGTTTCATCAATCTCCTTCAAAGTCTTCTGTAGAGTTTGTTGTTTCTGTGGTGACAGATAATGAAACAATTTCTGGAACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG</genome_strand>
        <mrna_strand>CGCCTATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTANAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551031" ref_strand="+" ref_description="SGN-E551031 [TUS-54-O14]">
      <seq>ctccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggttagttgcaacatcacatcattcccgttgcttgtcttttcagttgttttgacattttgaagggatgaaattactgtctgaagaacttggcatatacacactttccctccatttacggatgaaaatggagacgtcaaataaggatttgtcgacactggccaaaatagcttttgaattgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16242" stop="13677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="290" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15357" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="513" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15356" i_stop="14032" i_length="1325">
            <donor d_prob="0.590" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13977" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="568" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E551031" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15357"/>
          <exon e_start="14031" e_stop="13977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAA</genome_strand>
        <mrna_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688809" ref_strand="+" ref_description="SGN-E688809 [t3_tus_54_O14]">
      <seq>ctccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggttagttgcaacatcacatcattcccgttgcttgtcttttcagttgttttgacattttgaagggatgaaattactgtctgaagaacttggcatatacacactttccctccatttacggatgaaaatggagacgtcaaataaggatttgtcgacactggccaaaatagcttttgaattgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16242" stop="13677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="290" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15357" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="513" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15356" i_stop="14032" i_length="1325">
            <donor d_prob="0.590" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14031" g_stop="13977" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="568" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E688809" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15357"/>
          <exon e_start="14031" e_stop="13977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAA</genome_strand>
        <mrna_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396139" ref_strand="+" ref_description="SGN-E396139 [TUS-17-G19]">
      <seq>ttactggaaaaggaaaacatggaacaaaaattccactcttgagacaaaaggtcatggactgtttaatgaaccccttgcctgaaacagttagtactactgtagttgccaagcgatacatgtttctttcagctgcactaatagaagtttccccaccaaaaatgccagttactgaactagcgcttcactataagcttcttgaagaattgcttggcagtatgagccattcatctccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaagtcaggaagatcctcggttctgctggatgttgttgttggtcttttgtatcctgtaatatctctacaggagacgtcaaataaggatttgtcgacactggccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17391" stop="13697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17091" g_stop="16856" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16855" i_stop="15939" i_length="917">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="518" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15579" g_stop="15484" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="614" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14031" g_stop="13997" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="649" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E396139" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17091" e_stop="16856"/>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15484"/>
          <exon e_start="14031" e_stop="13997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAAGTGAGTATTCAACGTTTCAATTTTCTGCTTAGGATCACAATTTATCATTTTCAGTTTCTCTATTATTTTTCTGGTTATGCTAAGAGTTGCTTGGTTACATGAGCCATTTGATATTTGATTTGATTGTCAAAGGAAGCATACGTTTATCTGTCGATCAACTCAAATCGCATACCTCTTTGATGAATTGCTTTGCTTGATAGGACTTTCCTTCTCGATCAGTTTTAGTTTTACAAGTTGAACTGGTTCTTCTCAGTTGTTCTACTGGAAAGACAAGCTTGTTAGTCTCAGCTTTTCCAGATCAATAGGTTCAGCTCTGAGCATCATTGTTGGGTCCCTTCTAAGATCTTCTAAAATATATTTTTCAATAACCTTTTTGCTCCTCATGGTTATGGATCCACATCTGATCTTGATCCCATTTTTTTTGTGCTTCCTCTCTTTTAATCTCGAAGGCATTATGGCCCCCACGTACATTCTCTTTGACCATTCTTCTTTTCAAGTTGTACATACATTGAGGCTATATCTTTGAGCTGATCTCGACTTCATAGTTTCATTACATTCCTTGTATCCAAAGTTGTTGAACTTTGAGGATCAAAAAGGTATTCTTTGACTCCTGTTCACCAAGAAAGATCTTTGACTACAACTTTTAATGTATAATGTCATCACTTATTTTGTTTTTGTTTAAGATTATTTTTTCATTTGTAAACGAGAACATTGTTACTTACTGTTCTTCATATCTAGTTTCTAACAAAAAGTTTATCTTTCAAAGACAAATTAATCTATGTTTAAGGGAAATTGATAAAATTGACCACCCCAGAAAAAGGAGTGGATCCTTTCACAGTTTCATCAATCTCCTTCAAAGTCTTCTGTAGAGTTTGTTGTTTCTGTGGTGACAGATAATGAAACAATTTCTGGAACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATGGTAAATCTTGTAACTGAGGTCTCTTGGAGTTGGAGAAAAGAAACTTTGATTTTTGTTTTTTGTCAATTTCTGTGATTGAGATCTCTTAGAAGAACAAACTTTGACTTATGATTTTTGACAAATTGATAAGAAGCATCTTGTTTATCTCATGGTGATAAGGCTATACTTTTAAGTTTTCTGTAATTTTTCTTGTCTTCAACAGCTATTTCTTGCAGTTCCTCACATTTGGCTGGTTGTTCTTTTTTTACCAACTACATATTTGTACCATTGGAACTAGAGGTCTGCCTTTCTTAGGTAATGAGGATGGAGAAATCTATGAAGGCAGGATATTATTGGAAATAGATGATTGGATTTAGTTGTTTCCATAGTTGAAATATAAGAGGAACTTCTGTGAGCCAAGTTAATAGGCTGATAATGCTGAAATTACATGTTTTTCTTCTTCTTCATCTCATCATTTGGCGTCTAAGATAGTTTTTTGAGTTACTGCTTTTTAGCTTGTTCAAATTTTACAAATGAGTGTGTACGAAATGTTGTGACCTAAGAAAATAACTAATTATCTCCTCTCTTTAAGGACTTAAGATTTTAGATGAGGTGACACCAATCAGGTTTGATTTTCGTTCCAATTAGTCAACCTTACTTGCCTATAAGAGTTAAGCCTGCATATCGTGGTATTGATGAAATCTTTAAAGAAATAAATCTCTCAACTTTAACAACATAGCTTTTAGGGAAGGTATAGCCACATCGTAAGAACTATTGCATTAAACTGTTGTCACATAAACTTCTCCTTGCCGAATTTTGATTCTTATCTCTCTCCGAGTCTTTAACTAAACTGACCTTTTCCCTTAACTGACGGGAGCTACTGTATATCAACAAGAAAGGATTAAATCGAAAAGACTCCTGTTGAAGAGTTCCATTTTTGGATTAAATTCTGACTGCAAGGCATCTCCATTGTTAATTTCCTATGGTTTTATGCTTGGTACACGAGCCATAGCCATTGAACTTGTATCCTGTACAAAGAAGGAGAATTGTGAGTCTGTGCTCCCTTCATGTTTTGGTGATATTTCGGGTGTATATATTATCCCAGACCATATTAGATCTGCATGTTTCTAATTCTTTCGTTCAGTTTTTGTCTTGATTTATATCTACATATGAAGTAAGTCCTAGTTAATTTTGTTCAAACGAATGATACTGAAAATTTGAATTATTGACATTTTTTCAGCTGTTGCACACGTGAAGAAATTGATACACTATAAATTAATATATTCTCATTGGAGGTGTTTATAATAGAAGTGCATTTCTCTTTTGATACTGTTGATTTTTTGTAGGAGACGTCAAATAAGGATTTGTCGACACTGGCCAA</genome_strand>
        <mrna_strand>TTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGTCAAATAAGGATTTGTCGACACTGGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258104" ref_strand="+" ref_description="SGN-E258104 [cLEG-48-D9]">
      <seq>tccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="16242" stop="15251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="289" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15579" g_stop="15551" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="318" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E258104" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>311</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258104" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15551"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTCTAAA</genome_strand>
        <mrna_strand>GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474820" ref_strand="+" ref_description="SGN-E474820 [cSTB-38-G9]">
      <seq>cgaggcctgagtgggcagcttgtattcgttatgcagttacctggaaaaggaaaacatggaacaaaaattccactcttgagacaaaaggtcatggactgtttaatgaaccccttgcctgaaacagtcagtactactgtagttgccaagcgatacatgtttctttcagctgcactaatagaagtttccccaccaaaaatgccagttactgaactagcacttcactataagcttcttgaagaattgcttggcagtatgagccattcatctccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagttcatccacatgaagtagggacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagatactctggatgtgcaatcggacataatttctgacaatggagtatcaaccgaacagtctcatgatgatgttaaatggatggagacgctatttcatttcattatctcatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17427" stop="15255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17127" g_stop="16856" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16855" i_stop="15939" i_length="917">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15938" g_stop="15657" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="555" r_length="282" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15579" g_stop="15555" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="580" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E474820" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17127" e_stop="16856"/>
          <exon e_start="15938" e_stop="15657"/>
          <exon e_start="15579" e_stop="15555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTA-CTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAAGTGAGTATTCAACGTTTCAATTTTCTGCTTAGGATCACAATTTATCATTTTCAGTTTCTCTATTATTTTTCTGGTTATGCTAAGAGTTGCTTGGTTACATGAGCCATTTGATATTTGATTTGATTGTCAAAGGAAGCATACGTTTATCTGTCGATCAACTCAAATCGCATACCTCTTTGATGAATTGCTTTGCTTGATAGGACTTTCCTTCTCGATCAGTTTTAGTTTTACAAGTTGAACTGGTTCTTCTCAGTTGTTCTACTGGAAAGACAAGCTTGTTAGTCTCAGCTTTTCCAGATCAATAGGTTCAGCTCTGAGCATCATTGTTGGGTCCCTTCTAAGATCTTCTAAAATATATTTTTCAATAACCTTTTTGCTCCTCATGGTTATGGATCCACATCTGATCTTGATCCCATTTTTTTTGTGCTTCCTCTCTTTTAATCTCGAAGGCATTATGGCCCCCACGTACATTCTCTTTGACCATTCTTCTTTTCAAGTTGTACATACATTGAGGCTATATCTTTGAGCTGATCTCGACTTCATAGTTTCATTACATTCCTTGTATCCAAAGTTGTTGAACTTTGAGGATCAAAAAGGTATTCTTTGACTCCTGTTCACCAAGAAAGATCTTTGACTACAACTTTTAATGTATAATGTCATCACTTATTTTGTTTTTGTTTAAGATTATTTTTTCATTTGTAAACGAGAACATTGTTACTTACTGTTCTTCATATCTAGTTTCTAACAAAAAGTTTATCTTTCAAAGACAAATTAATCTATGTTTAAGGGAAATTGATAAAATTGACCACCCCAGAAAAAGGAGTGGATCCTTTCACAGTTTCATCAATCTCCTTCAAAGTCTTCTGTAGAGTTTGTTGTTTCTGTGGTGACAGATAATGAAACAATTTCTGGAACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACGGTACAGTCAGCCAACTCATCTATTGGGCTTTTTGCACCTAAGACCTTTTATTGATTACTTGTTTTGGTGATATGCAGCTATTTCATTTCATTATCTCATCTC</genome_strand>
        <mrna_strand>CGAGGCCTGAGTGGGCAGCTTGTATTCGTTATGCAGTTACCTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTCAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCACTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGTTCATCCACATGAAGTAGGGACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGATACTCTGGATGTGCAATCGGACATAATTTCTGACAATGGAGTATCAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG.............................................................................CTATTTCATTTCATTATCTCATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259460" ref_strand="+" ref_description="SGN-E259460 [cLEG-42-G21]">
      <seq>agaagcatgggatagctggttgatgacccattttcagagtattattcaagcaccaacagttgagtccatacctgagtgggctgcttgtattcgttatgcagttactggaaaaggaaaacatggaacaaaaattccactcttgagacaaaaggtcatggactgtttaatgaaccccttgcctgaaacagttagtactactgtagttgccaagcgatacatgtttctttcagctgcactaatagaagtttccccaccaaaaatgccagttactgaactagcgcttcactataagcttcttgaagaattgcttggcagtatgagccattcatctccacaagtgagggaatccattggtgtcaccctctctgttttatgctcaaacattcggctccaggtgtcctgcaatcaagctcatccacatgaagtaggaacaagtaatgtgaacaggaaagttgaagcagggaattgggatcattatctagtagaacgtgcatctgagcttgtggtgaagatccaaagttttagccagtcagacactctggatgtgcaaacggacatgatttctgacaatggagtattaaccgaacagtctcatgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17492" stop="15374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17192" g_stop="16856" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16855" i_stop="15939" i_length="917">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15938" g_stop="15674" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="602" r_length="265" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E259460" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17192" e_stop="16856"/>
          <exon e_start="15938" e_stop="15674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAAGTGAGTATTCAACGTTTCAATTTTCTGCTTAGGATCACAATTTATCATTTTCAGTTTCTCTATTATTTTTCTGGTTATGCTAAGAGTTGCTTGGTTACATGAGCCATTTGATATTTGATTTGATTGTCAAAGGAAGCATACGTTTATCTGTCGATCAACTCAAATCGCATACCTCTTTGATGAATTGCTTTGCTTGATAGGACTTTCCTTCTCGATCAGTTTTAGTTTTACAAGTTGAACTGGTTCTTCTCAGTTGTTCTACTGGAAAGACAAGCTTGTTAGTCTCAGCTTTTCCAGATCAATAGGTTCAGCTCTGAGCATCATTGTTGGGTCCCTTCTAAGATCTTCTAAAATATATTTTTCAATAACCTTTTTGCTCCTCATGGTTATGGATCCACATCTGATCTTGATCCCATTTTTTTTGTGCTTCCTCTCTTTTAATCTCGAAGGCATTATGGCCCCCACGTACATTCTCTTTGACCATTCTTCTTTTCAAGTTGTACATACATTGAGGCTATATCTTTGAGCTGATCTCGACTTCATAGTTTCATTACATTCCTTGTATCCAAAGTTGTTGAACTTTGAGGATCAAAAAGGTATTCTTTGACTCCTGTTCACCAAGAAAGATCTTTGACTACAACTTTTAATGTATAATGTCATCACTTATTTTGTTTTTGTTTAAGATTATTTTTTCATTTGTAAACGAGAACATTGTTACTTACTGTTCTTCATATCTAGTTTCTAACAAAAAGTTTATCTTTCAAAGACAAATTAATCTATGTTTAAGGGAAATTGATAAAATTGACCACCCCAGAAAAAGGAGTGGATCCTTTCACAGTTTCATCAATCTCCTTCAAAGTCTTCTGTAGAGTTTGTTGTTTCTGTGGTGACAGATAATGAAACAATTTCTGGAACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATG</genome_strand>
        <mrna_strand>AGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546663" ref_strand="+" ref_description="SGN-E546663 [TUS-70-C8]">
      <seq>gataaatccaagtcttctctcgaagaagctttaagtaatatattccaggaagaggggtttttcaatgaaaccctgaatagtctttctcatgttcatataattgacactgatggtgcttcttctaaaggaaatcatggcacctcctcatttcagagtgtggctgacaaatccattactcgattttattttgaattttcttcatcatggccccgtactcccaattggatatctttgtttggaaatgacacattctactcaagctttgcccgaatttttaaacgtctagtacaggaatgtggtgctcctgttatactggcactaaaagatgcattagcagactacataaatgcaaaggagaggacaaagcagtgtgttgctgctgaggcaatggcaggtgtgctacattctgatgtttccggtgtttcagaagcatgggatagctggttgatgacccattttcagagtattattcaagcaccaacagttgagtccatacctgagtgggcagcttgtattcgttatgcagttactggaaaaggaaaacatggaacaaaaattccactcttgagacaaaaggtcatggactgtttaatgaaccccttgcctgaaacagttagtactactgtagttgccaagcgatacatgtttctttcagctgcactaatagaagtttccccaccaaaaatgccagttactgaactagcgcttcactataagcttcttgaagaaatgcttggcagtatgagccattcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17917" stop="16564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17617" g_stop="16864" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="754" r_length="754" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E546663" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17617" e_stop="16864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAATTCAAGTCTTCTCTCGAAGAAGCTTTAAGTAATATATTCCAGGAAGAGGGGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTTTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAGTGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCAT</genome_strand>
        <mrna_strand>GATAAATCCAAGTCTTCTCTCGAAGAAGCTTTAAGTAATATATTCCAGGAAGAGGGGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTCTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAATGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCAGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAAATGCTTGGCAGTATGAGCCATTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210380" ref_strand="+" ref_description="SGN-E210380 [cLEC-35-F8]">
      <seq>ctggaaaaggaaaacatggaacaaaaattccactcttgagacaaaaggtcatggactgtttaatgaaccccttgcctgaaacagttagtactactgtagttgccaagcgatacatgtttctttcagctgcactaatagaagtttccccaccaaaaatgccagttactgaactagcgcttcactataagcttcttgaagaattgcttggcagtatgagccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17388" stop="16567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17088" g_stop="16867" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E210380" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>222</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17088" e_stop="16867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATT</genome_strand>
        <mrna_strand>CTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401573" ref_strand="+" ref_description="SGN-E401573 [PPC-4-L5]">
      <seq>gttttttcaatgaaaccctgaatagtctttctcatgttcatataattgacactgatggtgcttcttctaaaggaaatcatggaacctcttcatttcagagtgtggctgacaaatccattactcgtttttattttgaattttcttcatcatggccccgtactcccaattggatatctttgtttggaaatgacactttctactcgagctttgcccgaatttttaaacgtctagtacaggaatgtggtgctcctgttatactggcactaaaagatgcattagcagactacataaatgcaaaggagaggacaaagcagtgtgttgctgctgaggcagtggcaggtgtgctacattctgatgttttcggtgtttcagaagcatgggatagctggttgatgacccattttcagagtattattcaagcaccaacagttgagtccatacctgagtgggcagcttgtattcgttatgcagntactggcaaaggaaaacatggaacaaaaattccactcttgagacaaaagtcatggactgtttaatgaatcccttgcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17862" stop="16711"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17562" g_stop="17011" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="551" r_length="551" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E401573" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17562" e_stop="17011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTTTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAGTGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTG</genome_strand>
        <mrna_strand>GTTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGAACCTCTTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGTTTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACTTTCTACTCGAGCTTTGCCCGAATTTTTAAACGTCTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAGTGGCAGGTGTGCTACATTCTGATGTTTTCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCAGCTTGTATTCGTTATGCAGNTACTGGCAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAA-GTCATGGACTGTTTAATGAATCCCTTGCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358053" ref_strand="+" ref_description="SGN-E358053 [cLHT-32-N13]">
      <seq>ataaatccaagtcttctctcgaagaagctttaagtaatatattccaggaagaggggtttttcaatgaaaccctgaatagtctttctcatgttcatataattgacactgatggtgcttcttctaaaggaaatcatggcacctcctcatttcagagtgtggctgacaaatccattactcgattttattttgaattttcttcatcatggccccgtactcccaattggatatctttgtttggaaatgacacattctactcaagctttgcccgaatttttaaacgtctagtacaggaatgtggtgctcctgttatactggcactaaaagatgcattagcagactacataaatgcaaaggagaggacaaagcagtgtgttgctgctgaggcaatggcaggtgtgctacattctgatgtttccggtgtttcagaagcatgggatagctggttgatgacccattttcagagtattattcaagcaccaacagttgagtccatacctgagtgggcagcttgtattcgttatgcagttactggaaaaggaaaacatggaacaaaaattccact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="17916" stop="16755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17616" g_stop="17055" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E358053" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E358053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17616" e_stop="17055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAATTCAAGTCTTCTCTCGAAGAAGCTTTAAGTAATATATTCCAGGAAGAGGGGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTTTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAGTGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACT</genome_strand>
        <mrna_strand>ATAAATCCAAGTCTTCTCTCGAAGAAGCTTTAAGTAATATATTCCAGGAAGAGGGGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTCTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAATGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCAGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248133" ref_strand="+" ref_description="SGN-E248133 [cLEF-55-C19]">
      <seq>agggaaaaaaaggcctagttgggcacttattgacaaagcatgcatgcagggtacttggagagcctcacaatcatcatatcatatcttccggctgagtgcaaatgtatctccttcagatcatatcattcatttgacggatgatcttcttaatctctccttgcatagttatgaaacagtccgtggacttgctggaaaatctctcttgaagatgatgaagagatggccctctacaatctcaaaatgtgtgctcagtctgagtcagaacttgaaaaattctagctcaccagaatgcgcagtcttaagttcctgtgcagtccttgcaacgcaaactgttcttaaatgtttaacaacggatttgaaggcactttcttccttcctgcttggaattctgtcaagctctcatcatgaaacactaaaagctcagaaagccatcaatgagcttttcattaagtacaacattcatttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="20741" stop="18950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20538" g_stop="20527" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20526" i_stop="20440" i_length="87">
            <donor d_prob="0.921" d_score="0.00"/>
            <acceptor a_prob="0.703" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20439" g_stop="20269" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="183" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20268" i_stop="19794" i_length="475">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.820" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19793" g_stop="19625" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="352" r_length="169" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19624" i_stop="19548" i_length="77">
            <donor d_prob="0.753" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19547" g_stop="19504" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="396" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19503" i_stop="19411" i_length="93">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19410" g_stop="19368" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="439" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19367" i_stop="19280" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.583" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19279" g_stop="19250" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="469" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E248133" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20538" e_stop="20527"/>
          <exon e_start="20439" e_stop="20269"/>
          <exon e_start="19793" e_stop="19625"/>
          <exon e_start="19547" e_stop="19504"/>
          <exon e_start="19410" e_stop="19368"/>
          <exon e_start="19279" e_stop="19250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGAAAAAAAGGTAAATTTAGCTATGTTTTTGTATGTAAGACTCACGGCCATATTGAATATGGTGTTTCCGTCTTTGAAGATAACACCAATTTTGCAGGCCTAGTTGGGCACTTATTGACAAAGCATGCATGCATAGTACTTGGAGAGCCTCACAATCATCATATCATATCTTCCGGCTGAGTGCAAATGTATCTCCTTCAGATCATATCATTCATTTGACGGATGATCTTCTTAATCTCTCCTTGCATAGTTATGAAACAGTCCGTGGGTGAGTTCTAATCTTTCAATCATATTGTCTGAACATGTGTCCTCTTTGCCTTAAATGAGGTCAAAGTTTATAAATTCTTTGAATTTGAAATATTTCTACATCAACGAATAGAATAGCTGCAACAGGAGCTTCACAGTCGCTCTATATTGGACATACGGAAGCCTTTAAACCTTTTACTCATTCACTTAGTACTCATATATTAAATAGGTGCTTAAGCTAATATAATTACATGCTATTTTATCCTGTTGTAGGGAAGTCATGGAAGTAGAATAATGATATAATCTTTTGAGTGATTTAAGCAATACAATGAGGAGTACTAACTGTGTGCATATCTCTCATGGTCATTGTCCTGTCATTCTTAATTTCCATTGGGAAGACCATTTTTATGTTGATTGCTAATGATTAGGTCCCATAACCAAGTTGCATCTTCTGGAAGATTTTTTGTATCTCATCTATCTACTCCTCATTTCCTCAGACTTGCTGGAAAATCTCTCTTGAAGATGATGAAGAGATGGCCCTCTACAATCTCAAAATGTGTGCTCAGTCTGAGTCAGAACTTGAAAAATTCTAGCTCACCAGAATGCGCAGTCTTAGGTTCCTGTGCAGTCCTTGCAACGCAAACTGTTCTTAAATGTTTAACAACGGTACTGATCTTCATACTACATGCATTATTCTTTAGGAAGTGAGTACCTGACTTTGTTTTTGCTCTTCATGACACAAGGATTTGAAGGCACTTTCTTCCTTCCTGCTTGGAATTCTGTCAAGGTAAATTTTTTTGCTTGCATCTTGTTTAGCTTGTGATTCCTTATAGCCCAATGTTGGTGTTGACTCTTTGTTACCGAATCTTTATTGCTCAAGCTCTCATCATGAAACACTAAAAGCTCAGAAAGCCATCAATGAGGTGAGATATACATTCAAAGTCGAGTCTTTTCATTTCTCTTTTCTATGTTGACAAAAGAAAGTTTATTTTTTTATTGGATATCTTACAGCTTTTCATTAAGTACAACATTCATTTTTCT</genome_strand>
        <mrna_strand>AGGGAAAAAAAG.......................................................................................GCCTAGTTGGGCACTTATTGACAAAGCATGCATGCAGGGTACTTGGAGAGCCTCACAATCATCATATCATATCTTCCGGCTGAGTGCAAATGTATCTCCTTCAGATCATATCATTCATTTGACGGATGATCTTCTTAATCTCTCCTTGCATAGTTATGAAACAGTCCGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAAAATCTCTCTTGAAGATGATGAAGAGATGGCCCTCTACAATCTCAAAATGTGTGCTCAGTCTGAGTCAGAACTTGAAAAATTCTAGCTCACCAGAATGCGCAGTCTTAAGTTCCTGTGCAGTCCTTGCAACGCAAACTGTTCTTAAATGTTTAACAACG.............................................................................GATTTGAAGGCACTTTCTTCCTTCCTGCTTGGAATTCTGTCAAG.............................................................................................CTCTCATCATGAAACACTAAAAGCTCAGAAAGCCATCAATGAG........................................................................................CTTTTCATTAAGTACAACATTCATTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317207" ref_strand="+" ref_description="SGN-E317207 [cTOA-28-A16]">
      <seq>cgagttcagatctttgcttgaaaatccatggcacaattcattctttgagggtgctggttttgtaagactgttccttcctaccaatagagacaaccaggatttcttttctcacacttggattgttacgtgtttagtccactgggattccgtaccaaattcccagttttggaacagccagtgggcctccgttacagctcgtgttttaaagaactatagcttcattgactgggaacatttcttaccagatattttcaataaatatttgaatatgttcgaggttccagtagcaaatggcagtgggtcaaacccattctctgtggatgttcccagaaacacaagattcttgttctcaaatagaacaatcactccatcaaaagccattgctaaatctatagtttatctactaaaacctggtggttctgcacaagaacatttggagaaattggtcaacctcttggaacagtattaccatccttctaatggtggtcgctggacttattccttggagcgattcttgttccacttggtaaatatatttcagaaacgcttgcaaaatgagcaacagagaaaagatgacggcgagcagtctgaaatcttcctagggcagtcagagagggtttcttttgtgcattctattctncagctaattgatcgtggacagtatagcaaaaatgaacatctttctgaaaccgttgcagctgccacttctatccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="25863" stop="23989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25756" g_stop="25748" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25747" i_stop="25558" i_length="190">
            <donor d_prob="0.758" d_score="0.00"/>
            <acceptor a_prob="0.647" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25557" g_stop="25456" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="111" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25455" i_stop="25370" i_length="86">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25369" g_stop="25204" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="277" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25203" i_stop="24984" i_length="220">
            <donor d_prob="0.846" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24983" g_stop="24867" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="394" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="24866" i_stop="24785" i_length="82">
            <donor d_prob="0.168" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="24784" g_stop="24717" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="462" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="24716" i_stop="24628" i_length="89">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="24627" g_stop="24526" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="564" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="24525" i_stop="24441" i_length="85">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24440" g_stop="24289" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="716" r_length="152" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E317207" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25756" e_stop="25748"/>
          <exon e_start="25557" e_stop="25456"/>
          <exon e_start="25369" e_stop="25204"/>
          <exon e_start="24983" e_stop="24867"/>
          <exon e_start="24784" e_stop="24717"/>
          <exon e_start="24627" e_stop="24526"/>
          <exon e_start="24440" e_stop="24289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGTTCAGGTAGGATTTACTTCCTGGGTTAGGCTCTGTAAGTGCAAAAAGTGACAGTAACTTGGGGTGTTTGCTGAACTTCTTTCCTAGGCCAAGATCCATCAACCACTATTGATGTGTTTCTCCTCTCATGAACTAATTTTTTAGGGTTGAATTTGGCTTGTTAGGTCCTCATTCATTAATGGAGTGCATTTTGCAGATCTTTGCTTGAAAATCCATGGCACAATTCATCCTTTGAGGGTGCTGGTTTTGTAAGACTGTTCCTTCCTACCAATAGAGACAACCAGGATTTCTTTTCTCAGTAAGGACAATCTACTTCTTCTGAAGATATTTTCACTTTCATCTCACTACATAAGTAAACTAATCCTCTTTTTGGTGTTATGGCAGCACTTGGATTGTTACGTGTTTAGTCCACTGGGATTCCGTACCAAATTCCCAGTTTTGGAACAGCCAGTGGGCCTCCGTTACAGCTCGTGTTTTAAAGAACTATAGCTTCATTGACTGGGAACATTTCTTACCAGATATTTTCAATAAATATTTGAATATGTTCGAGGTAGGTTATGTACTTATGTTGCATAGACTTTATCTTTGTTGCTTGAAGAAATTTTCTTAGCAAATGAGCATGTGCAAACAAGTTTGTCTTATTACTATGCCTTGTATGGAAGATCATATTCCATCATAATTGTATATTGGAAGGTTCCTTATTTTAGAGAGAAATGGAACTTGTTGCCCTGGTGTTTCTCATGTAATATTTCATTCATCTTTGTTCACAGGTTCCAGTAGCAAATGGCAGTGGGTCAAACCCATTCTCTGTGGATGTTCCCAGAAACACAAGATTCTTGTTCTCAAATAGAACAATCACTCCATCAAAAGCCATTGCTAAATCTATAGTAAGCGCACTTGTATAAGTGATCATAAGAATACATCTGCATGTGGCAAAAATGACCTCTGTTTTTGTCAATGTAAATGCAGGTTTATCTACTAAAACCTGGTGGTTCTGCACAAGAACATTTGGAGAAATTGGTCAACCTCTTGGAACAGTTCGTTTTCTACACAGATTTTATATCACCTTACTTTAAAAAATTTTGCCTTATAAAATTTTGTAAATCATCTCATTTTGTTGTTTTAGGTATTACCATCCTTCTAATGGTGGTCGCTGGACTTATTCCTTGGAGCGATTCTTGTTCCACTTGGTAAATATATTTCAGAAACGCTTGCAAAATGAGCAACAGTAAGAATTTTTAATCTATCATAGTAATTCTAGATTCTATATGAGAGTATGTAGCCTTTGTCTGACTGTGAGATGGTGGGCTCAGGAGAAAAGATGACGGCGAGCAGTCTGAAATCTTCCTAGGGCAGTCAGAGAGGGTTTCTTTTGTGCATTCTATTCTCAAGCTAATTGATCGTGGACAGTATAGCAAAAATGAACATCTTTCTGAAACCGTTGCAGCTGCCACTTCTATCCTTT</genome_strand>
        <mrna_strand>CGAGTTCAG..............................................................................................................................................................................................ATCTTTGCTTGAAAATCCATGGCACAATTCATTCTTTGAGGGTGCTGGTTTTGTAAGACTGTTCCTTCCTACCAATAGAGACAACCAGGATTTCTTTTCTCA......................................................................................CACTTGGATTGTTACGTGTTTAGTCCACTGGGATTCCGTACCAAATTCCCAGTTTTGGAACAGCCAGTGGGCCTCCGTTACAGCTCGTGTTTTAAAGAACTATAGCTTCATTGACTGGGAACATTTCTTACCAGATATTTTCAATAAATATTTGAATATGTTCGAG............................................................................................................................................................................................................................GTTCCAGTAGCAAATGGCAGTGGGTCAAACCCATTCTCTGTGGATGTTCCCAGAAACACAAGATTCTTGTTCTCAAATAGAACAATCACTCCATCAAAAGCCATTGCTAAATCTATA..................................................................................GTTTATCTACTAAAACCTGGTGGTTCTGCACAAGAACATTTGGAGAAATTGGTCAACCTCTTGGAACA.........................................................................................GTATTACCATCCTTCTAATGGTGGTCGCTGGACTTATTCCTTGGAGCGATTCTTGTTCCACTTGGTAAATATATTTCAGAAACGCTTGCAAAATGAGCAACA.....................................................................................GAGAAAAGATGACGGCGAGCAGTCTGAAATCTTCCTAGGGCAGTCAGAGAGGGTTTCTTTTGTGCATTCTATTCTNCAGCTAATTGATCGTGGACAGTATAGCAAAAATGAACATCTTTCTGAAACCGTTGCAGCTGCCACTTCTATCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277905" ref_strand="+" ref_description="SGN-E277905 [cLEL-5-L7](-)">
      <seq>catcaaggtggtcctcagaaacagaggtgaacagaatcgtaaaaaacagagcatgaaatataaagaaagaacaacagatctgaaatatttctctcctaatactgtccattcgtgcctctttggccgcaattctgcggccagagagatcctcttctctctgccaaagcttgagaagcaacagatgccctggactttttgagatttccatcaatggatggttttgaatcgcagttatagtagtaatacccgaagaaagtttaagctgatgctcttcatcaaccggaatttcaacgataacatgacaatcctttgattccgccattaatgaaaattgaaatgaaagaacagctaaacaaaaatactaacaataacaaaagaaattagtgagctttagacgaaattgcggttaacttaagagtagattgtgctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="32179" stop="31149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31879" g_stop="31446" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E277905" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277905" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31879" e_stop="31446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAAGGTGGTCCTCAGAAACAGAGGTGAACAGAATCGTAAAAAACAGAGCATGAAATATAAAGAAAAAACAACAGATCTGAAATATTTCTCTCCTAATACTGTCCATTCGTGCCTCTTTGGCCGCAATTCTGCGGCCAGAGAGATCCTCTTCTCTCTGCCAAAGCTTGAGAAGCAACAGATGCCCTGGACTTTTTGAGATTTCCATCAATGGATGGTTTTGAATCGCAGTTATAGTAGTAATACCCGAAGAAAGTTTAAGCTGATGCTCTTCATCAACCGGAATTTCAACGATAACATGACAATCCTTTGATTCCGCCATTAATGAAAATTGAAATGAAAGAACAGCTAAACAAAAATACTAACAATAACAAAAGAAATTAGTGAGCTTTAGACGAAATTGCGGTTAACTTAAGAGTAGATTGTGATAGCTT</genome_strand>
        <mrna_strand>CATCAAGGTGGTCCTCAGAAACAGAGGTGAACAGAATCGTAAAAAACAGAGCATGAAATATAAAGAAAGAACAACAGATCTGAAATATTTCTCTCCTAATACTGTCCATTCGTGCCTCTTTGGCCGCAATTCTGCGGCCAGAGAGATCCTCTTCTCTCTGCCAAAGCTTGAGAAGCAACAGATGCCCTGGACTTTTTGAGATTTCCATCAATGGATGGTTTTGAATCGCAGTTATAGTAGTAATACCCGAAGAAAGTTTAAGCTGATGCTCTTCATCAACCGGAATTTCAACGATAACATGACAATCCTTTGATTCCGCCATTAATGAAAATTGAAATGAAAGAACAGCTAAACAAAAATACTAACAATAACAAAAGAAATTAGTGAGCTTTAGACGAAATTGCGGTTAACTTAAGAGTAGATTGTGCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313395" ref_strand="+" ref_description="SGN-E313395 [cTOA-13-K19]">
      <seq>tctactcttaagttaaccgcaatttcgtctaaagctcactaatttcttttgttattgttagtatttttgtttagctgttctttcatttcaattttcattaatggcggaatcaaaggattgtcatgttatcgttgaaattccggttgatgaagagcatcagcttaaactttcttcgggtattactactataactgcgattcaaaaccatccattgatggaaatctcaaaaagtccagggcatctgttgcttctcaagctttggcagagagaagaggatctctctggccgcagaattgcggccaaagaggcacgaatggacagtattaggagagaaatatttcagatctgttgttttttctttatatttcatgctctgttttttacgattctgttcacctctgtttctgaggaccaccttgatggtaaggttatgtgtcaaaaatggtggattccttcgattctatcagtttgtacttcgttttgtattgtgtttttggtgcaggtgaaactttacaggttttggaaggtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31158" stop="32287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31458" g_stop="31987" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E313395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31458" e_stop="31987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACTCTTAAGTTAACCGCAATTTCGTCTAAAGCTCACTAATTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTAT</genome_strand>
        <mrna_strand>TCTACTCTTAAGTTAACCGCAATTTCGTCTAAAGCTCACTAATTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334843" ref_strand="+" ref_description="SGN-E334843 [cTOE-3-G16]">
      <seq>tcttaagttaaccgcaatttcgtctaaagctcactaatttcttttgttattgttagtatttttgtttagctgttctttcatttcaattttcattaatggcggaatcaaaggattgtcatgttatcgttgaaattccggttgatgaacagcatcagcttaaactttcttcgggtattactactataactgcgattcaaaaccatccattgatggaaatctcaaaaagtccagggcatctgttgcttctcaagctttggcagagagaagaggatctctctggccgcataattgcggccaaagaggcacgaatggacagtattaggagagaaatatttcagatctgttgttttttctttatatttcatgctctgtttcttacgattctgttcacctctgtttctgaggaccaccttgatggtaaggttatgtgtcaaaaatggtggattccttcgattctatcagttcgtacttcgctttgtattgtgtttttggtgcaagtgaaactttacaggttttggaacgtatcgaggcatttgcagagggagaagggggatggtagagcactgacaaggtgcatttcggagttgaggatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31163" stop="32358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31463" g_stop="32058" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E334843" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31463" e_stop="32058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTAAGTTAACCGCAATTTCGTCTAAAGCTCACTAATTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAA</genome_strand>
        <mrna_strand>TCTTAAGTTAACCGCAATTTCGTCTAAAGCTCACTAATTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAACAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCATAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTCTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTCGTACTTCGCTTTGTATTGTGTTTTTGGTGCAAGTGAAACTTTACAGGTTTTGGAACGTATCGAGGCATTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E438575" ref_strand="+" ref_description="SGN-E438575 [cSTA-8-B10]">
      <seq>ctctttttaagctttcttaattcatcccattgctagtatttctgtttagctgttctttcatttcagattttcattaatggcagaatcaaaggattgtcatgttatcgttgaaattccggttgatgaagagcatcagcttaaactttcttcagccattactaccataactgcaattcaaaaccatccattaatggaaatctcaaaaagtccagggcatctcttgcttctcaagctttggcaaagagaagaggatctctcaggccgcagaattgcggccaaagagacacgaatggacagtattaggagagaaatatttcagatctgttgttttttctttatatttcatgccttgttttttacgattctgttcacctctgtttctgacgaccaccttgatggtaatgttatgtgccaaaaatggtggattccttcgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31211" stop="32218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31481" g_stop="31918" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E438575" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E438575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31481" e_stop="31918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTCTAAAGCTCACTAATTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCA-ATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTC</genome_strand>
        <mrna_strand>CTCTTTTTAAGCTTTCTTAATTC--ATCCCATTGCTAGTATTTCTGTTTAGCTGTTCTTTCATTTCAGATTTTCATTAATGGCAGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCAGCCATTACTACCATAACTGCAATTCAAAACCATCCATTAATGGAAATCTCAAAAAGTCCAGGGCATCTCTTGCTTCTCAAGCTTTGGCAAAGAGAAGAGGATCTCTCAGGCCGCAGAATTGCGGCCAAAGAGACACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCCTTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGACGACCACCTTGATGGTAATGTTATGTGCCAAAAATGGTGGATTCCTTCGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339811" ref_strand="+" ref_description="SGN-E339811 [cTOE-16-P6]">
      <seq>tttcttttgttattgttagtatttttgtttagctgttctttcatttcaattttcattaatggcggaatcaaaggattgtcatgttatcgttgaaattccggttgatgaagagcatcagcttaaactttcttcgggtattactactataactgcgattcaaaaccatccattgatggaaatctcaaaaagtccagggcatctgttgcttctcaagctttggcagagagaagaggatctctctggccgcagaattgcggccaaagaggcacgaatggacagtattaggagagaaatatttcagatctgttgttttttctttatatttcatgctctgttttttacgattctgttcacctctgtttctgaggaccaccttgatggtaaggttatgtgtcaaaaatggtggattccttcgattctatcagtttgtacttcgttttgtattgtgtttttggtgcaggtgaaactttacaggttttggaaggtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31200" stop="32287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31500" g_stop="31987" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E339811" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31500" e_stop="31987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTAT</genome_strand>
        <mrna_strand>TTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E414345" ref_strand="+" ref_description="SGN-E414345 [STM-19-I22]">
      <seq>ttctgtttagcctgttctttcatttcagtttttcattaatggcagaatcaaccggattgtcatgttatcgttgaaattccggttgatgaagagcatcagcttaaactttcttcagccattactaccataactgcaattcaaaaccatcccattaatggaaatctcaaaaagtccagggcatctcttgcttctcaagctttggcaaagaagaagaaggatctctctggccgtagaattgcggccaaagagacacgaatggacagtattaggagagaaatatttcagatctgttgttttttctttatatttcatgctctgttttttatgattctgttcacctctgtttctgaggaccaccttgatggtaatgttgtgtgtcaaaaatggtggattccttcgattctatcagtttgtacttcgttttgtattgtgtttttggtgcaggtgaaactttacaggttttggaaagtgtcgaggcagttgcagagggagaggggggatggtagagcactgaccaggtgcatttcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31223" stop="32344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31522" g_stop="32044" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E414345" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E414345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31522" e_stop="32044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGTTTAG-CTGTTCTTTCATTTCAATTTT-CATTAATGGCGGAATCAA-AGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCAT-CCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAG-AGAAG-AGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGG</genome_strand>
        <mrna_strand>TTCTGTTTAGCCTGTTCTTTCATTTCAGTTTTTCATTAATGGCAGAATCAACCGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCAGCCATTACTACCATAACTGCAATTCAAAACCATCCCATTAATGGAAATCTCAAAAAGTCCAGGGCATCTCTTGCTTCTCAAGCTTTGGCAAAGAAGAAGAAGGATCTCTCTGGCCGTAGAATTGCGGCCAAAGAGACACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTATGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAATGTTGTGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAAGTGTCGAGGCAGTTGCAGAGGGAGAGGGGGGATGGTAGAGCACTGACCAGGTGCATTTCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267413" ref_strand="+" ref_description="SGN-E267413 [cLEI-8-A12]">
      <seq>tggacagtattaggagagaaatatttcagatctgttgttttttctttatatttcatgctctgttttttacgattctgttcacctctgtttctgaggaccaccttgatggtaaggttatgtgtcaaaaatggtggattccttcgattctatcagtttgtacttcgttttgtattgtgtttttggtgcaggtgaaactttacaggttttggaaggtatcgaggcagttgcagagggagaagggggatggtagagcactgacaaggtgcatttcggagttgaggatgaaaggagcgagttttgatctgtcgaaagagccacagattgggaagaagatgaagagctctagtgtggagatcaaatggaagccattaacttggttatctcagtatgctgtaactatctgtctcatttgttttacaggattgctcttccctgcttccaggctcgtcctttgcgcttgatgtacttcgtcttcaatctctcttcttacacaaatcatcaaatttggaatctggaaagagttgttctttgcttcaaagaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31472" stop="32615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31772" g_stop="32315" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="544" r_length="544" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E267413" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267413" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31772" e_stop="32315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAAGGAGCGAGTTTTGATCTGTCGAAAGAGCCACAGATTGGGAAGAAGATGAAGAGCTCTAGTGTGGAGATCAAATGGAAGCCATTAACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTTGTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCAGCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTT</genome_strand>
        <mrna_strand>TGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAAGGAGCGAGTTTTGATCTGTCGAAAGAGCCACAGATTGGGAAGAAGATGAAGAGCTCTAGTGTGGAGATCAAATGGAAGCCATTAACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTTGTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCATCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553070" ref_strand="+" ref_description="SGN-E553070 [cTSB-5-O8]">
      <seq>atcgaggcagttgcagagggagaagggggatggtagagcactgacaaggtgcatttcggagttgaggatgaaaggagcgagttttgatctgtcgaaagagccacagattgggaagaagatgaagagctctagtgtggagatcaaatggaagccattaacttggttatctcagtatgctgtaactatctgtctcatttgttttacaggattgctcttccctgcttccaggctcgtcctttgcgcttgatgtacttcgtcttcaatctctcttcttacacaaatcagcaaatttggaatctggaaagagttgttctttgcttcaaagaacttgcagacatccaagtcgaggcattcgtacatgaatgaaaatgggaatatacagtctcaaacctgatgtttcccacatagagccgtctggccggaaaaagaacccaaaggcaacaggagaagagttgtccaccagcagagaaaaatggacagtccagtgcacagaacattcaatattcaggcagggatctggaaaaggaacacacacaccccaagggacgggcaccacagctcaagcatcacatgaaaactctaccattgctccaagctcctttcagggtgctagccaatgatgcctacacacaatttctttacacctccatctcaatcatgctgcaatgacatcaatattggaaacttgctcaccattgcggtgtctcgactcagctatcaggctcactgctctgcccactgcatgagcggaagagcagagatctagagttttaacagccagcacttttgaagtttgcagatttgggaaacactgcccatgttctaacgtctctttcagcatttttcaaaaatgacatgtaataaatgttaccaaatcaatgtaaaccagttgttcatcttgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31686" stop="33281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31986" g_stop="32356" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32357" i_stop="32448" i_length="92">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32449" g_stop="32986" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="910" r_length="539" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E553070" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>909</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31986" e_stop="32356"/>
          <exon e_start="32449" e_stop="32986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAAGGAGCGAGTTTTGATCTGTCGAAAGAGCCACAGATTGGGAAGAAGATGAAGAGCTCTAGTGTGGAGATCAAATGGAAGCCATTAACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTTGTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCAGCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATGGTAAATGATTATTCTCAGATTGATTTTGTCACCTTCTTCAGTAAGCACAATTTGTGAGCTCATTTCATTCTTCAACTTTGTTTCTATTTCAGGGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTAATAAATGTTACAAAATCAATGTAAACAAGTTGTTCATC-TGAAAATTTTG</genome_strand>
        <mrna_strand>ATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAAGGAGCGAGTTTTGATCTGTCGAAAGAGCCACAGATTGGGAAGAAGATGAAGAGCTCTAGTGTGGAGATCAAATGGAAGCCATTAACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTTGTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCAGCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATG............................................................................................GGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTAATAAATGTTACCAAATCAATGTAAACCAGTTGTTCATCTTGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318192" ref_strand="-" ref_description="SGN-E318192 [cTOA-29-H15]">
      <seq>gatgaagagctctagtgtgangatcaaatggaagccattacttggttatctcagtatgctgtaactatctgtctcattgtttttacaggattgctcttccctgcttccaggctcgtcctttgcgcttgatgtacttcgtcttcaatctctcttcttacacaaatcagcaaatttggaatctggaaagagttgttctttgcttcaaagaacttgcagacatccaagtcgaggcattcgtacatgaatgaaaatgggaatatacagtctcaaacctgatgtttcccacatagagccgtctggccggaaaaagaacccaaaggcaacaggagaagagttgtccaccagcagagaaaaatggacagtccagtgcacagaacattcaatattcaggcagggatctggaaaaggaacacacacaccccaagggacgggcaccacagctcaagcatcacatgaaaactctaccattgctccaagctcctttcagggtgctagccaatgatgcctacacacaatttctttacacctccatctcaatcatgctgcaatgacatcaatattggaaacttgctcaccattgcggtgtctcgactcagctatcaggctcactgctctgcccactgcatgagcggaagagcagagatctagagttttaacagccagcacttttgaagtttgcagatttgggaaacactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31803" stop="33192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32103" g_stop="32356" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32357" i_stop="32448" i_length="92">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32449" g_stop="32892" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="697" r_length="444" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E318192" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318192" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="32103" e_stop="32356"/>
          <exon e_start="32449" e_stop="32892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAAGAGCTCTAGTGTGGAGATCAAATGGAAGCCATTAACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTTGTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCAGCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATGGTAAATGATTATTCTCAGATTGATTTTGTCACCTTCTTCAGTAAGCACAATTTGTGAGCTCATTTCATTCTTCAACTTTGTTTCTATTTCAGGGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGC</genome_strand>
        <mrna_strand>GATGAAGAGCTCTAGTGTGANGATCAAATGGAAGCCATT-ACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTGTTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCAGCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATG............................................................................................GGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200179" ref_strand="+" ref_description="SGN-E200179 [cLEB-7-B18]">
      <seq>gcacgaggttctttgcttcaaagaacttgcagacatccaagtcgaggcattcgtacatgaatgaaaatgggaatatacagtctcaaacctgatgtttcccacatagagccgtctggccggaaaaagaacccaaaggcaacaggagaagagttgtccaccagcagagaaaaatggacagtccagtgcacagaacattcaatattcaggcagggatctggaaaaggaacacacacaccccaagggacgggcaccacagctcaagcatcacatgaaaactctaccattgctccaagctcctttcagggtgctagccaatgatgcctacacacaatttctttacacctccatctcaatcatgctgcaatgacatcaatattggaaacttgctcaccattgcggtgtctcgactcagctatcaggctcactgctctgcccactgcatgagcggaagagcagagatctagagttttaacagccagcacttttgaagtttgcagatttgggaaacactgcccatgttctaacgtctctttcagcatttttcaaaaatgacatgttataaatgttacaaaatcaatgtaaacaagttgttcatttgagaattttgcgttcttcatcataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31995" stop="33312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32286" g_stop="32356" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32357" i_stop="32448" i_length="92">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32449" g_stop="33015" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="636" r_length="567" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E200179" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32286" e_stop="32356"/>
          <exon e_start="32449" e_stop="33015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATGGTAAATGATTATTCTCAGATTGATTTTGTCACCTTCTTCAGTAAGCACAATTTGTGAGCTCATTTCATTCTTCAACTTTGTTTCTATTTCAGGGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTAATAAATGTTACAAAATCAATGTAAACAAGTTGTTCATCTGAAAATTTTGCTTTCTTCATCATAAATTATACAAGATCT</genome_strand>
        <mrna_strand>GCACGAG--GTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATG............................................................................................GGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTTATAAATGTTACAAAATCAATGTAAACAAGTTGTTCATTTGAGAATTTTGCGTTCTTCATCATAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E280030" ref_strand="-" ref_description="SGN-E280030 [cLEL-7-K10](-)">
      <seq>gcacgaggttctttgcttcaaagaacttgcagacatccaagtcgaggcattcgtacatgaatgaaaatggcaatatacagtctcaaacctgatgtttcccacatagagccgtctggccggaaaaagaacccaaaggcaacaggagaagagttgtccaccagcagagaaaaatggacagtccagtgcacagaacattcaatattcaggcagggatctggaaaaggaacacacacaccccaagggacgggcaccacagctcaagcatcacatgaaaactctaccattgctccaagctcctttcagggtgctagccaatgatgcctacacacaatttctttacacctccatctcaatcatgctgcaatgacatcaatattggaaacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="31995" stop="33066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32286" g_stop="32356" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32357" i_stop="32448" i_length="92">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32449" g_stop="32766" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="387" r_length="318" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E280030" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280030" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="32286" e_stop="32356"/>
          <exon e_start="32449" e_stop="32766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATGGTAAATGATTATTCTCAGATTGATTTTGTCACCTTCTTCAGTAAGCACAATTTGTGAGCTCATTTCATTCTTCAACTTTGTTTCTATTTCAGGGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGC</genome_strand>
        <mrna_strand>GCACGAG--GTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATG............................................................................................GCAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E225929" ref_strand="+" ref_description="SGN-E225929 [cLEL-31-E22](-)">
      <seq>tcctttcagggtgctagccaataatgcctacacacaatttctttacacctccatctcaatcatgctgcaatgacatcaatattggaaacttgctcaccattgcggtgtctcgactcagctatcaggctcactgctctgcccactgcatgagcggaagagcagagatctagagttttaacagccagcacttttgaagtttgcagatttgggaaacactgcccatgttctaacgtctctttcagcatttttcaaaaatgacatgtaataaatgttacaaaatcaatgtaaacaagttgttcatctgaaaattttgctttcttcatcataaattatacaagatctttttcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="32374" stop="33321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32674" g_stop="33022" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="349" r_length="349" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="350" polyA_stop="365"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E225929" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32674" e_stop="33022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTAATAAATGTTACAAAATCAATGTAAACAAGTTGTTCATCTGAAAATTTTGCTTTCTTCATCATAAATTATACAAGATCTTTTTCAG</genome_strand>
        <mrna_strand>TCCTTTCAGGGTGCTAGCCAATAATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTAATAAATGTTACAAAATCAATGTAAACAAGTTGTTCATCTGAAAATTTTGCTTTCTTCATCATAAATTATACAAGATCTTTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479051" ref_strand="-" ref_description="SGN-E479051 [cSTD-8-I12]">
      <seq>atgaggtaaatgagattgcatggaacacaggtggcgatatgttctttcttacaaccggaaatggaactgtggaagtcttagcttatccgtctctacaagccgttaacacgcttaatgctcacactgctggttgttactgcattgcaattgatccactaggaagatattttgctgttggaagtgctgattcattggtcagcctctggagcattaaggagatgctatgtcttcgaacatttacaaaacttgagtggccagttcggacaataagtttcaatcacacaggagactacattgcctctgctagtgaagatttgtttattgatattgcatatgtccaaactggacggtcagttcaccagattccatgtcgtgctgccatgaacagtgttgaatggaatccaaaacagaacttgcttgcctttgctggggatgataagaacaaataccaggctgatgaaggtgtgtttcgcatatttggctttgagagtgcatagccctgaaaggttactttataattaaaaaaaaaaggcctgaaaaaaaatctttgtataatctatgaagaagaaagcaaaattttcagatgaacaacttgtttacattgattttgtaacatttattacatgtcatttttgaaaaattctgaaagagatgttagaacaaaaaaaaaaaaaaaaaaactgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="34564" stop="32596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34264" g_stop="34202" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34095" g_stop="33996" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="163" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33680" g_stop="33594" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="250" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94">
            <donor d_prob="0.961" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33499" g_stop="33421" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="329" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.826" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33286" g_stop="33154" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="462" r_length="133" r_score="0.955"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68">
            <donor d_prob="0.503" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.53"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33085" g_stop="32897" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="661" r_length="199" r_score="0.799"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="662" polyA_stop="681"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E479051" ref_strand="-">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E479051" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34264" e_stop="34202"/>
          <exon e_start="34095" e_stop="33996"/>
          <exon e_start="33680" e_stop="33594"/>
          <exon e_start="33499" e_stop="33421"/>
          <exon e_start="33286" e_stop="33154"/>
          <exon e_start="33085" e_stop="32897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTGATATTTTGCTGCAAGTATAATTCCTTTGTGCTATGGTTTAAATGAGACTTACAGAGGCCTCAGACAGCTCAAGAATATGGACATTCCTTTCTAGTAATGGGAAAATTCTTTGGCACTAGTTCCAAGTAGCTAGTACCTTGTGGCACTATGATGTCAATAAGGCTTCTGGCACAGGACCATGCATATGGTCACTCTATGATGTCATTATGAGTTTTGTTGAAGGACCATTCATAGATTCTCTCAGACCATGAGTGGGGGTTTTGATCTGAACTAATTATACCTTATTTTGATTCAATATTACACAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGAGTAAGTTCTCAAGTATGTTTTCGTCCATCTTATAATTTATACGAGTGTCCTGGGTTAGGTAGCTGATCTTTAATTTTTTCTTTTTGCTACTCAGGTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATTGTATGTTGTCAAGAACCTGTATACTCTTCTTCTACATAGAAAATCTCTTCAACCTTTCAATAACTTAGCCATTAGTCTCTTCTACATAGAAAATCTCTTTAACCTTTCGATAACTCAGCCATTATTTTGCACAGGCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAGGTGTCTTTCTGACCTAAGAAAGAACTCTTTACGAGTTCCAAGGCCTAATATTTTTCTTTTCTATGTAGGTGTGTTTCGCATATTTGGCTTTGAGAGCGCATA-----GAGCCCTGA--TGA-AAGGTTATAAAAGAGGCCTG-AAAAAGATC-TTGTATAATTTATGATGAAGAAAGCAAAATTTTCAGATGAACAACTTGTTTACATTGATTTTGTAACATTTATTACATGTCATTTTTGAAAAATGCTGAAAGAGACGTTAGAAC</genome_strand>
        <mrna_strand>ATGAGGTAAATGAGATTGCATGGAACACAGGTGGCGATATGTTCTTTCTTACAACCGGAAATG..........................................................................................................GAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCCGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG...........................................................................................................................................................................................................................................................................................................................ATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTCTGGAGCATTAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA..............................................................................................GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT......................................................................................................................................GCATATGTCCAAACTGGACGGTCAGTTCACCAGATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACAGAACTTGCTTGCCTTTGCTGGGGATGATAAGAACAAATACCAGGCTGATGAAG....................................................................GTGTGTTTCGCATATTTGGCTTTGAGAGTGCATAGCCCTGAAAGGTTACTTTATAATTAAAAAAAAAAGGCCTGAAAAAAAATCTTTGTATAATCTATGAAGAAGAAAGCAAAATTTTCAGATGAACAACTTGTTTACATTGATTTTGTAACATTTATTACATGTCATTTTTGAAAAATTCTGAAAGAGATGTTAGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E693816" ref_strand="+" ref_description="SGN-E693816 [LH_Ea02E22](-)">
      <seq>gggaaaatatcaatatcacttacaagcctgatgggacacatatagctgttgggaacagggatgatgagctaacaatcttggatgttcgcaagtttaaacctattcataagcgcaagtttaattatgaggtaaatgagattgcatggaacacgggtggtgatatgttctttcttacaactggaaatggaactgtggaagtcttagcttatccgtctctacaagccgttaacacacttaatgctcacactgctggttgttactgcattgcaattgatccactaggaagatattttgctgttggaagtgctgattcattggtcagcctttggagcattaaggagatgctatgtcttcgaacatttacaaaacttgagtggccagttcggacaataagtttcaatcacacaggagactacgttgcctctgctagtgaagatttgtttattgatattgctaatgtccaaactggacggtcagtccaccaaattccatgtcgtgctgccatgaacagtgttgaatggaatccaaaacacaacttgcttgcctttgccggggatgataagaacaaataccaggctgatgaaggtgtttttcgcatatttggctttgagagcgcagcataaaaagccctgatgaaaggttattttattaaaagagaggcctgaaagaaatcttgtataatttatgatgaagaaagcaaaattttcagatgaacaacttgtttacattgcttttgtaacatttattacatgtcaggtttgaaaaatgctgaaagagacgttgaacaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="35648" stop="32596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35348" g_stop="35290" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="128" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="0.98"/>
            <acceptor a_prob="0.822" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="186" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34095" g_stop="33996" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="286" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33680" g_stop="33594" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="373" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94">
            <donor d_prob="0.961" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33499" g_stop="33421" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="452" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.826" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33286" g_stop="33154" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="585" r_length="133" r_score="0.985"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68">
            <donor d_prob="0.503" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="33085" g_stop="32902" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="782" r_length="197" r_score="0.821"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="784" polyA_stop="803"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E693816" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E693816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35348" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="33996"/>
          <exon e_start="33680" e_stop="33594"/>
          <exon e_start="33499" e_stop="33421"/>
          <exon e_start="33286" e_stop="33154"/>
          <exon e_start="33085" e_stop="32902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTGATATTTTGCTGCAAGTATAATTCCTTTGTGCTATGGTTTAAATGAGACTTACAGAGGCCTCAGACAGCTCAAGAATATGGACATTCCTTTCTAGTAATGGGAAAATTCTTTGGCACTAGTTCCAAGTAGCTAGTACCTTGTGGCACTATGATGTCAATAAGGCTTCTGGCACAGGACCATGCATATGGTCACTCTATGATGTCATTATGAGTTTTGTTGAAGGACCATTCATAGATTCTCTCAGACCATGAGTGGGGGTTTTGATCTGAACTAATTATACCTTATTTTGATTCAATATTACACAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGAGTAAGTTCTCAAGTATGTTTTCGTCCATCTTATAATTTATACGAGTGTCCTGGGTTAGGTAGCTGATCTTTAATTTTTTCTTTTTGCTACTCAGGTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATTGTATGTTGTCAAGAACCTGTATACTCTTCTTCTACATAGAAAATCTCTTCAACCTTTCAATAACTTAGCCATTAGTCTCTTCTACATAGAAAATCTCTTTAACCTTTCGATAACTCAGCCATTATTTTGCACAGGCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAGGTGTCTTTCTGACCTAAGAAAGAACTCTTTACGAGTTCCAAGGCCTAATATTTTTCTTTTCTATGTAGGTGTGTTTCGCATATTTGGCTTTGAGA--GC-GCAT--AGAGCCCTGATGAAAGG-----TTA-T-AAA-AGAGGCCTGAAAAAGATCTTGTATAATTTATGATGAAGAAAGCAAAATTTTCAGATGAACAACTTGTTTACATTGATTTTGTAACATTTATTACATGTCATTTTTGAAAAATGCTGAAAGAGACGTT</genome_strand>
        <mrna_strand>GGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAACCTATTCATAAGCGCAAGTTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACGGGTGGTGATATGTTCTTTCTTACAACTGGAAATG..........................................................................................................GAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCCGTTAACACACTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG...........................................................................................................................................................................................................................................................................................................................ATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATTAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA..............................................................................................GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACGTTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT......................................................................................................................................GCTAATGTCCAAACTGGACGGTCAGTCCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAG....................................................................GTGTTTTTCGCATATTTGGCTTTGAGAGCGCAGCATAAAAAGCCCTGATGAAAGGTTATTTTATTAAAAGAGAGGCCTGAAAGAAATCTTGTATAATTTATGATGAAGAAAGCAAAATTTTCAGATGAACAACTTGTTTACATTGCTTTTGTAACATTTATTACATGTCAGGTTTGAAAAATGCTGAAAGAGACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713687" ref_strand="+" ref_description="SGN-E713687 [FB09BD06]">
      <seq>gacagttcgattatgggatgcccgtagtgggaaatgctcacagcaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatatagctgttgggaacagggatgatgagctaacaatcttggatgttcgcaagtttaagcctattcataagcgcaagtttaattatgaggtaaatgagattgcatggaacacgggtggcgatatgttctttcttacaactggaaatggaactgtggaagtcttagcttatccgtctctacaagctgttaacacgcttaatgctcacactgctggttgttactgcattgcaattgatccactaggaagatattttgctgttggaagtgctgattcattggtcagcctttggagcatcaaggagatgctatgtcttcgaacatttacaaaacttgagtggccagttcggacaataagtttcaatcacacaggagactacattgcctctgctagtgaagatttgtttattgatattgctaatgtccaatctggacggtcagttcaccaaattccatgtcgtgctgccatgaacagtgttgaatggaatccaaaacacaacttgcttgcctttgccggggatgataagaacaaataccaggctgatgaaggtgtgtttcgcatatttggctttgagagcgcatagagccctgatgaaaggttataaaagaggcctgaaaaagatcttgtataatttatgatgaagaaagcaaaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="36281" stop="32678"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35981" g_stop="35956" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574">
            <donor d_prob="0.918" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35381" g_stop="35290" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="118" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="187" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="1.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="245" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34095" g_stop="33996" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="345" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33680" g_stop="33594" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="432" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33499" g_stop="33421" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="511" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.826" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="33286" g_stop="33154" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="644" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68">
            <donor d_prob="0.503" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="33085" g_stop="32978" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="752" r_length="108" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E713687" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713687" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35981" e_stop="35956"/>
          <exon e_start="35381" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="33996"/>
          <exon e_start="33680" e_stop="33594"/>
          <exon e_start="33499" e_stop="33421"/>
          <exon e_start="33286" e_stop="33154"/>
          <exon e_start="33085" e_stop="32978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAGTTCGATTATGGGATGCCCGTAGTAAGTTTATATTATTTTGCACCAGCAATAAGCTGCCAAAGTACTGTATGAAATAATGAGTTGGAATTTAAAGAATGTAATGCTATAAGAGCCTATGTCTATTGGTTACTTGAGGACTTGCACTATATTTATTCCCATAAAGTAATCATCCGAGAACAATATTACTCCTGTTTCAAAAATAATTGGAGGGGTCTAGCGTAAGTGGGTCAAACCTGTTAATTTCCGGTCTCAATTCATACATCAGTTTCTTATGTCTAGAACAATCTTATATAGTTAGAAACTGGAAAAAAGAAAACTATAAATTACACATTCTAATATGAAAATATTTTTGGTCAAAGAAAAGGTTATTTGACTGCTTAGAAGTATGTCATGTAAAGTGGAACCCAGGGGGGTTGGGTATGAGTTAGGTAACTCTACATGCACTTTCTTCTTTATAACTACTAATCAAAAACTCTACGTACACTTTCACAGCCTAGTTTCCCGTCAATTTCCAGGAAGTTGAAGATATTCATATGTTTTTATTTATTGGTCAGGGTGTTGCAGATGCTAAAACATTTTGGTCTCCATTTGGCAGGTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTGATATTTTGCTGCAAGTATAATTCCTTTGTGCTATGGTTTAAATGAGACTTACAGAGGCCTCAGACAGCTCAAGAATATGGACATTCCTTTCTAGTAATGGGAAAATTCTTTGGCACTAGTTCCAAGTAGCTAGTACCTTGTGGCACTATGATGTCAATAAGGCTTCTGGCACAGGACCATGCATATGGTCACTCTATGATGTCATTATGAGTTTTGTTGAAGGACCATTCATAGATTCTCTCAGACCATGAGTGGGGGTTTTGATCTGAACTAATTATACCTTATTTTGATTCAATATTACACAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGAGTAAGTTCTCAAGTATGTTTTCGTCCATCTTATAATTTATACGAGTGTCCTGGGTTAGGTAGCTGATCTTTAATTTTTTCTTTTTGCTACTCAGGTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATTGTATGTTGTCAAGAACCTGTATACTCTTCTTCTACATAGAAAATCTCTTCAACCTTTCAATAACTTAGCCATTAGTCTCTTCTACATAGAAAATCTCTTTAACCTTTCGATAACTCAGCCATTATTTTGCACAGGCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAGGTGTCTTTCTGACCTAAGAAAGAACTCTTTACGAGTTCCAAGGCCTAATATTTTTCTTTTCTATGTAGGTGTGTTTCGCATATTTGGCTTTGAGAGCGCATAGAGCCCTGATGAAAGGTTATAAAAGAGGCCTGAAAAAGATCTTGTATAATTTATGATGAAGAAAGCAAAATTTT</genome_strand>
        <mrna_strand>GACAGTTCGATTATGGGATGCCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATG..........................................................................................................GAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG...........................................................................................................................................................................................................................................................................................................................ATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA..............................................................................................GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT......................................................................................................................................GCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAG....................................................................GTGTGTTTCGCATATTTGGCTTTGAGAGCGCATAGAGCCCTGATGAAAGGTTATAAAAGAGGCCTGAAAAAGATCTTGTATAATTTATGATGAAGAAAGCAAAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356710" ref_strand="+" ref_description="SGN-E356710 [cTOS-21-O21]">
      <seq>ctattcataagcgcaagtttaattatgaggtaaatgagattgcatggaacacgggtggcgatatgttctttcttacaactggaaatggaactgtggaagtcttagcttatccgtctctacaagctgttaacacgcttaatgctcacactgctggttgttactgcattgcaattgatccactaagaagatattttgctgttggaagtgctgattcattggtcagcctttggagcatcaaggagatgctatgtcttcgaacatttacaaaacttgagtggccagttcggacaataagtttcaatcacacaggagactacattgcctctgctagtgaagatttgtttattgatattgctaatgtccaatctggacggtcagttcaccaaattccatgtcgtgctgccatgaacagtggtgaatggaatccaaaacacaacttgcttgcctttgccggggatgataagaacaaataccaggctgatgaaggtgtgtttcgcatatttggctttgagagcgcatagagccctgatgaaaaggtataaaagaagcctgaaaaagatcttggtatatttatgatgaagaaagcaaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="35278" stop="32680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34978" g_stop="34950" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="0.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="87" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34095" g_stop="33996" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="187" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33680" g_stop="33594" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="274" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33499" g_stop="33421" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="353" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.826" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33286" g_stop="33154" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="486" r_length="133" r_score="0.992"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68">
            <donor d_prob="0.503" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33085" g_stop="32980" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="592" r_length="106" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E356710" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34978" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="33996"/>
          <exon e_start="33680" e_stop="33594"/>
          <exon e_start="33499" e_stop="33421"/>
          <exon e_start="33286" e_stop="33154"/>
          <exon e_start="33085" e_stop="32980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTGATATTTTGCTGCAAGTATAATTCCTTTGTGCTATGGTTTAAATGAGACTTACAGAGGCCTCAGACAGCTCAAGAATATGGACATTCCTTTCTAGTAATGGGAAAATTCTTTGGCACTAGTTCCAAGTAGCTAGTACCTTGTGGCACTATGATGTCAATAAGGCTTCTGGCACAGGACCATGCATATGGTCACTCTATGATGTCATTATGAGTTTTGTTGAAGGACCATTCATAGATTCTCTCAGACCATGAGTGGGGGTTTTGATCTGAACTAATTATACCTTATTTTGATTCAATATTACACAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGAGTAAGTTCTCAAGTATGTTTTCGTCCATCTTATAATTTATACGAGTGTCCTGGGTTAGGTAGCTGATCTTTAATTTTTTCTTTTTGCTACTCAGGTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATTGTATGTTGTCAAGAACCTGTATACTCTTCTTCTACATAGAAAATCTCTTCAACCTTTCAATAACTTAGCCATTAGTCTCTTCTACATAGAAAATCTCTTTAACCTTTCGATAACTCAGCCATTATTTTGCACAGGCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAGGTGTCTTTCTGACCTAAGAAAGAACTCTTTACGAGTTCCAAGGCCTAATATTTTTCTTTTCTATGTAGGTGTGTTTCGCATATTTGGCTTTGAGAGCGCATAGAGCCCTGATGAAAGGTTATAAAAGAGGCCTGAAAAAGATCTTGTATAATTTATGATGAAGAAAGCAAAATT</genome_strand>
        <mrna_strand>CTATTCATAAGCGCAAGTTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATG..........................................................................................................GAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAAGAAG...........................................................................................................................................................................................................................................................................................................................ATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA..............................................................................................GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT......................................................................................................................................GCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGGTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAG....................................................................GTGTGTTTCGCATATTTGGCTTTGAGAGCGCATAGAGCCCTGATGAAAAGGTATAAAAGAAGCCTGAAAAAGATCTTGGTATATTTATGATGAAGAAAGCAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426297" ref_strand="+" ref_description="SGN-E426297 [STM-46-I8]">
      <seq>gaggaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatgtagctgttgggaacagggatgatgagctaacaatattggatgttcgcaagtttaagcctattcataagcgcaaatttaattatgaggtaaatgagattgcatggaacacaggtggcgatatgttctttcttacaacaggaaatggaactgtggaagtcttagcttatccatctctacaagctgttaacacgcttaatgctcacactgctggttgttactgcattgcaattgatccactaggaagatattttgctgttggaagtgctgattcactggtcagcctctggagcatcaaggagatgctatgtcttcgaacatttacaaaacttgagtggccagttcggacaataagtttcaatcacacaggagactacattgcctctgctagtgaagatttgtttattgatattgcgaatgtccaaactggacggtcagttcaccagattccatgtcgtgctgccatgaacagtgttgaatggaatccaaaacagaacttgcttgcctttgctggggatgataagaacaaataccaggctgatgaaggtgtgtttcgcatatttgggctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="35666" stop="32762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35367" g_stop="35290" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="147" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="0.98"/>
            <acceptor a_prob="0.822" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="205" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34095" g_stop="33996" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="305" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33680" g_stop="33594" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="392" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94">
            <donor d_prob="0.961" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33499" g_stop="33421" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="471" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.826" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33286" g_stop="33154" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="604" r_length="133" r_score="0.962"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68">
            <donor d_prob="0.503" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="33085" g_stop="33062" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="629" r_length="25" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E426297" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E426297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35367" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="33996"/>
          <exon e_start="33680" e_stop="33594"/>
          <exon e_start="33499" e_stop="33421"/>
          <exon e_start="33286" e_stop="33154"/>
          <exon e_start="33085" e_stop="33062"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTGATATTTTGCTGCAAGTATAATTCCTTTGTGCTATGGTTTAAATGAGACTTACAGAGGCCTCAGACAGCTCAAGAATATGGACATTCCTTTCTAGTAATGGGAAAATTCTTTGGCACTAGTTCCAAGTAGCTAGTACCTTGTGGCACTATGATGTCAATAAGGCTTCTGGCACAGGACCATGCATATGGTCACTCTATGATGTCATTATGAGTTTTGTTGAAGGACCATTCATAGATTCTCTCAGACCATGAGTGGGGGTTTTGATCTGAACTAATTATACCTTATTTTGATTCAATATTACACAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGAGTAAGTTCTCAAGTATGTTTTCGTCCATCTTATAATTTATACGAGTGTCCTGGGTTAGGTAGCTGATCTTTAATTTTTTCTTTTTGCTACTCAGGTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATTGTATGTTGTCAAGAACCTGTATACTCTTCTTCTACATAGAAAATCTCTTCAACCTTTCAATAACTTAGCCATTAGTCTCTTCTACATAGAAAATCTCTTTAACCTTTCGATAACTCAGCCATTATTTTGCACAGGCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAGGTGTCTTTCTGACCTAAGAAAGAACTCTTTACGAGTTCCAAGGCCTAATATTTTTCTTTTCTATGTAGGTGTGTTTCGCATATTT-GGCTTTG</genome_strand>
        <mrna_strand>GAGGAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATGTAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATATTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAATTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACAGGTGGCGATATGTTCTTTCTTACAACAGGAAATG..........................................................................................................GAACTGTGGAAGTCTTAGCTTATCCATCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG...........................................................................................................................................................................................................................................................................................................................ATATTTTGCTGTTGGAAGTGCTGATTCACTGGTCAGCCTCTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA..............................................................................................GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT......................................................................................................................................GCGAATGTCCAAACTGGACGGTCAGTTCACCAGATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACAGAACTTGCTTGCCTTTGCTGGGGATGATAAGAACAAATACCAGGCTGATGAAG....................................................................GTGTGTTTCGCATATTTGGGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456528" ref_strand="+" ref_description="SGN-E456528 [cSTS-29-F4]">
      <seq>gaggaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatgtagctgttgggaacagggatgaatgagctaacaatattggatgttcgcaagtttaagcctattcataagcgcaaatttaattatgaggtaaatgagattgcatggaacacaggtggcgatatgttctttcttacaacaggaaatggaactgtggaagtcttagcttatccatctctacaagctgttaacacgcttaatgctcacactgctggttgttactgcattgcaattgatccactaggaagatattttgctgttggaagtgctgattcactggtcagcctctggagcatcaaggagatgctatgtcttcgaacatttacaaaacttgagtggccagttcggacaataagtttcaatcacacaggagactacattgcctctgctagtgaagatttgtttattgatattgcgaatgtccaaactggacggtcagttcaccagattccatgtcgtgctgccatgaacagtgttgaatggaatccaaaacagaacttgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="35666" stop="32896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35367" g_stop="35290" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="148" r_length="70" r_score="0.942"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="0.98"/>
            <acceptor a_prob="0.822" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="206" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34095" g_stop="33996" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="306" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33680" g_stop="33594" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="393" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94">
            <donor d_prob="0.961" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33499" g_stop="33421" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="472" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.826" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33286" g_stop="33196" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="563" r_length="91" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E456528" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35367" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="33996"/>
          <exon e_start="33680" e_stop="33594"/>
          <exon e_start="33499" e_stop="33421"/>
          <exon e_start="33286" e_stop="33196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATG-ATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAGGTGAGCTTGATATTTTGCTGCAAGTATAATTCCTTTGTGCTATGGTTTAAATGAGACTTACAGAGGCCTCAGACAGCTCAAGAATATGGACATTCCTTTCTAGTAATGGGAAAATTCTTTGGCACTAGTTCCAAGTAGCTAGTACCTTGTGGCACTATGATGTCAATAAGGCTTCTGGCACAGGACCATGCATATGGTCACTCTATGATGTCATTATGAGTTTTGTTGAAGGACCATTCATAGATTCTCTCAGACCATGAGTGGGGGTTTTGATCTGAACTAATTATACCTTATTTTGATTCAATATTACACAAGATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGAGTAAGTTCTCAAGTATGTTTTCGTCCATCTTATAATTTATACGAGTGTCCTGGGTTAGGTAGCTGATCTTTAATTTTTTCTTTTTGCTACTCAGGTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATTGTATGTTGTCAAGAACCTGTATACTCTTCTTCTACATAGAAAATCTCTTCAACCTTTCAATAACTTAGCCATTAGTCTCTTCTACATAGAAAATCTCTTTAACCTTTCGATAACTCAGCCATTATTTTGCACAGGCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTG</genome_strand>
        <mrna_strand>GAGGAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATGTAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGAATGAGCTAACAATATTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAATTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACAGGTGGCGATATGTTCTTTCTTACAACAGGAAATG..........................................................................................................GAACTGTGGAAGTCTTAGCTTATCCATCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG...........................................................................................................................................................................................................................................................................................................................ATATTTTGCTGTTGGAAGTGCTGATTCACTGGTCAGCCTCTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA..............................................................................................GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT......................................................................................................................................GCGAATGTCCAAACTGGACGGTCAGTTCACCAGATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACAGAACTTGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355720" ref_strand="+" ref_description="SGN-E355720 [cLHT-1-P15]">
      <seq>aagcagagagtgatggcggaaacaatacccttcaaaaatcttcatagcagagagtaccagggacacaagaagaaggtgcattcggtggcatggaactgcagtggcacgaaattagcttcaggttctgtggatcaaacagctcgtatttggcaaattgagcctcatggtcatggaaaggtaaaagatgttgaattaaagggtcacaccgacagcgtggaccagttatgttgggatccaaaacatgcagaattgatagctacagcatctggtgacaagacagttcgattatgggatgcccgtagtgggaaatgctcacagcaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatatagctgttgggaacagggatgatgagctaacaatcttggatgttcgcaaatttaaacctattcataagcgcaagtttaattatgaggtaaatgagattgcatggaacacgggtggtgatatgttctttcttacaactggaaatggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="38852" stop="33901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38552" g_stop="38477" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38476" i_stop="38336" i_length="141">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38335" g_stop="38240" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="171" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38239" i_stop="36086" i_length="2154">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36085" g_stop="35956" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="301" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35381" g_stop="35290" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="393" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="462" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="0.96"/>
            <acceptor a_prob="0.822" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="520" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="34095" g_stop="34091" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="525" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E355720" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38552" e_stop="38477"/>
          <exon e_start="38335" e_stop="38240"/>
          <exon e_start="36085" e_stop="35956"/>
          <exon e_start="35381" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="34091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAGAAGAGTAATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAGGTTTCTCTCTCTAAAACTATTCCTTCACTTCATTGTTAACAATACAACCCTAATTTTGCTTTTCCTTTTTATGAACTCTCTGATTAGATGAATTGACTATGTGATACTTTATCTTCTCTGTTTTTTTAAAAAAAATTAAAGGTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCATGTAAGCTTCATGAGCTCATCTTTTTTGTTTTCAGTTAAGTTTTAATGCTGAAAAAAGGATAGCTTTTTGTTATTGCTCTGATTTTTAAATGTTCTACTGAAGTGGTGGGAAACTGGGTGTTGTAAATAAACTGAAAAAAGGATAGCTTTTTATGATATATGCATGAACTTAGGCACCTGAGATTTTCTCTAGAGTTAAGAAGCTGGTCTCTCACTTTAGTTGTTTCTGCCAAAGTCTAGTTCTATGTGGTATGAGTTAAGGAACCTATGATAGTAATGCCTGTTGCAGTTAGGTTTAAATTTTGTTGTTACTTATCAAAGGTGGGGTAAAGTAAGCGTAACCTCACTTGTGGGAGGTCATACGAATTCGATGTTATAGATACACAGAGAGGTTTGAATTGGGAGAATGGGTAAAAAGATGCAGAAATGCTCCAGAGTTGTACAGGATGGTAAAATATCGCATGTCCCAGCTCAACGCACTTGGTGTGGAGTTATAGAAAAGCTGGAAAGGTAGCAAAGGAACATTTGGGATGCGGCGGATGGGACAAAGAAGTTTCACCTAGTGGGACGGGAGACCGTGACATCTCCTAAACAGTGGTGAGGACTTGGGGTTAAAGACTTGAAGGTTTTTAACAAAGTCCTCTTGGATAAATGGCTTTGGAGATTCGAGATGGAGGAAGAAGCTTTATGGGAGGGGTGATAGCGGACAAATATGGAGTTATGGAAGGAAGATGGAGAACAAATGTGGTTACCTTCCGAGTTTGGCATGTAGAAGAATATAATGAAGGGGTGGGAAGCCTTTAACAAAAACATTTTCTTTTAAGTTTGGGGTTGGGAGGAGACTAGTTTTTGGGGGTCAAAAGTGGTGCAGTGATTTGGTTAAAGAATGATTTCTTGGTGTTGTATAGCATTTCTGGGCAAAGGGAGCTGTCTGTTCAGCAAATTAGGGGGTGGGACCTTCTGGGATTTCCGAAATTGGGAGATGACCGATCTTCAAAGCTTTCTAGTTTTATACCATAAGCAATGCAAACCAGTAGATAGACCTGATGCTTTGAGTTGGGAGTTGGTGAATAAAAAAGTGTTCTCTATTAAGTCCTATAAAAGCTTCCTGTTAGGGTGGAAGTTAGTTTTCTGTATGACTCGGTATGGACACCTAAGGTGCTGAAGAAGGTGTATTTCTTCTTGTGGTTAGCTACTAAAGGGGTGATATTGACGGTGAAGAATCTTAGGGAATGAAAGGTGGTGGGCATAAGTTGTTGTTTCTTGTGTCAAGAGGCAGGAGAGGACATGATCAATATTTTGCTACATTGCAAAACATCTCGAGGTTATGGTAGGATATCTTTAGATGGTTTGATATTTCTTGGGCAATCCCAAATGTCTGTTGAAGTGTTGATGTTCAGTTGGAAGAGTGGAGTTAGGATAAGAAGACACAAGGTGTGAATGTTACTCCTCTTGCAGTAATGTGGGTCATTTGGAAAGAGAGAAATAGGAGAGCTATTGAAAGGGTGGAGAATTGGAGATTAGCTTTGCTCAATTGAGGAGTAGTCTCCGATCCCTTATTTTCTTTTGGTGTAATTTTTGTTTGTATAGAGGATTGAGGTGTCTTTTGGAGAACCATGTTTGGTAGGTTTCTCCTTTTGTGGTATACTCCTTTTATATGACCAAGATAGCCTTGTTATTATCAATTAAATCTTTTACTTGGTCATAGACCAGATAAATTTTTACTTTGTTAGTAGATCGAGTGCTCCATAACTCTATATCATTTGTCATTTCTCTTTATCAAGGCTATAAACATACTTTTATCTTGTTTCATAGTCGCAAAAATCCCAAGTTCCTCAACTTTGGAATTTGCATGAAGATTGAATGATATTTTGCTTCTGTTGCTCTGTATCAATACTATAAATGTACTTTTATCTTGTTTCATAGTCACAGATCCCAAGTTCCTCAACTTTGGAACTTGCATGAAGATTGTAGTATATTTTGCCTTTGCTTGCAAAAACCTGAACAATTAATAGCTTGCCACCATAAAACTACACTAAAATGATTGCGCCCTATCTATGTTTTCAATATTCTAGTCTTTTCTCATTCTTGAGAGGTGGAGTATAGAACCTCTTATGTCTGCATACACTCCAAGTCTCTGATAGCTCTTTTGCAGGGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTAGTAAGTTTATATTATTTTGCACCAGCAATAAGCTGCCAAAGTACTGTATGAAATAATGAGTTGGAATTTAAAGAATGTAATGCTATAAGAGCCTATGTCTATTGGTTACTTGAGGACTTGCACTATATTTATTCCCATAAAGTAATCATCCGAGAACAATATTACTCCTGTTTCAAAAATAATTGGAGGGGTCTAGCGTAAGTGGGTCAAACCTGTTAATTTCCGGTCTCAATTCATACATCAGTTTCTTATGTCTAGAACAATCTTATATAGTTAGAAACTGGAAAAAAGAAAACTATAAATTACACATTCTAATATGAAAATATTTTTGGTCAAAGAAAAGGTTATTTGACTGCTTAGAAGTATGTCATGTAAAGTGGAACCCAGGGGGGTTGGGTATGAGTTAGGTAACTCTACATGCACTTTCTTCTTTATAACTACTAATCAAAAACTCTACGTACACTTTCACAGCCTAGTTTCCCGTCAATTTCCAGGAAGTTGAAGATATTCATATGTTTTTATTTATTGGTCAGGGTGTTGCAGATGCTAAAACATTTTGGTCTCCATTTGGCAGGTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACT</genome_strand>
        <mrna_strand>AAGCAG-AGAGTGATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAG.............................................................................................................................................GTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGCGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATCTTGGATGTTCGCAAATTTAAACCTATTCATAAGCGCAAGTTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACGGGTGGTGATATGTTCTTTCTTACAACTGGAAATG..........................................................................................................GAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306975" ref_strand="+" ref_description="SGN-E306975 [cLEY-11-H9]">
      <seq>agtaatggcggaaacaatacccttcaaaaatcttcatagcagagagtaccagggacacaagaagaaggtgcattcggtggcatggaactgcagtggcacgaaattagcttcaggttctgtggatcaaacagctcgtatttggcaaattgagcctcatggtcatggaaaggtaaaagatgttgaattaaagggtcacaccgacagtgtggaccagttatgttgggatccaaaacatgcagaattgatagctacagcatctggtgacaagacagttcgattatgggatgcccgtagtgggaaatgctcacagcaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatatagctgttgggaacagggatgatgagctaacaatcttggatgttcgcaagtttaagcctattcataagcgcaagtttaattatgaggtaaatgagattgcatggaacacgggtggcgatatgttctttcttacaactggaaatggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="38843" stop="33901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38543" g_stop="38477" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38476" i_stop="38336" i_length="141">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38335" g_stop="38240" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="163" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38239" i_stop="36086" i_length="2154">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36085" g_stop="35956" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="293" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35381" g_stop="35290" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="385" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="454" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690">
            <donor d_prob="0.137" d_score="1.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="34259" g_stop="34202" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="512" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="34095" g_stop="34091" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="517" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E306975" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38543" e_stop="38477"/>
          <exon e_start="38335" e_stop="38240"/>
          <exon e_start="36085" e_stop="35956"/>
          <exon e_start="35381" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
          <exon e_start="34259" e_stop="34202"/>
          <exon e_start="34095" e_stop="34091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAGGTTTCTCTCTCTAAAACTATTCCTTCACTTCATTGTTAACAATACAACCCTAATTTTGCTTTTCCTTTTTATGAACTCTCTGATTAGATGAATTGACTATGTGATACTTTATCTTCTCTGTTTTTTTAAAAAAAATTAAAGGTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCATGTAAGCTTCATGAGCTCATCTTTTTTGTTTTCAGTTAAGTTTTAATGCTGAAAAAAGGATAGCTTTTTGTTATTGCTCTGATTTTTAAATGTTCTACTGAAGTGGTGGGAAACTGGGTGTTGTAAATAAACTGAAAAAAGGATAGCTTTTTATGATATATGCATGAACTTAGGCACCTGAGATTTTCTCTAGAGTTAAGAAGCTGGTCTCTCACTTTAGTTGTTTCTGCCAAAGTCTAGTTCTATGTGGTATGAGTTAAGGAACCTATGATAGTAATGCCTGTTGCAGTTAGGTTTAAATTTTGTTGTTACTTATCAAAGGTGGGGTAAAGTAAGCGTAACCTCACTTGTGGGAGGTCATACGAATTCGATGTTATAGATACACAGAGAGGTTTGAATTGGGAGAATGGGTAAAAAGATGCAGAAATGCTCCAGAGTTGTACAGGATGGTAAAATATCGCATGTCCCAGCTCAACGCACTTGGTGTGGAGTTATAGAAAAGCTGGAAAGGTAGCAAAGGAACATTTGGGATGCGGCGGATGGGACAAAGAAGTTTCACCTAGTGGGACGGGAGACCGTGACATCTCCTAAACAGTGGTGAGGACTTGGGGTTAAAGACTTGAAGGTTTTTAACAAAGTCCTCTTGGATAAATGGCTTTGGAGATTCGAGATGGAGGAAGAAGCTTTATGGGAGGGGTGATAGCGGACAAATATGGAGTTATGGAAGGAAGATGGAGAACAAATGTGGTTACCTTCCGAGTTTGGCATGTAGAAGAATATAATGAAGGGGTGGGAAGCCTTTAACAAAAACATTTTCTTTTAAGTTTGGGGTTGGGAGGAGACTAGTTTTTGGGGGTCAAAAGTGGTGCAGTGATTTGGTTAAAGAATGATTTCTTGGTGTTGTATAGCATTTCTGGGCAAAGGGAGCTGTCTGTTCAGCAAATTAGGGGGTGGGACCTTCTGGGATTTCCGAAATTGGGAGATGACCGATCTTCAAAGCTTTCTAGTTTTATACCATAAGCAATGCAAACCAGTAGATAGACCTGATGCTTTGAGTTGGGAGTTGGTGAATAAAAAAGTGTTCTCTATTAAGTCCTATAAAAGCTTCCTGTTAGGGTGGAAGTTAGTTTTCTGTATGACTCGGTATGGACACCTAAGGTGCTGAAGAAGGTGTATTTCTTCTTGTGGTTAGCTACTAAAGGGGTGATATTGACGGTGAAGAATCTTAGGGAATGAAAGGTGGTGGGCATAAGTTGTTGTTTCTTGTGTCAAGAGGCAGGAGAGGACATGATCAATATTTTGCTACATTGCAAAACATCTCGAGGTTATGGTAGGATATCTTTAGATGGTTTGATATTTCTTGGGCAATCCCAAATGTCTGTTGAAGTGTTGATGTTCAGTTGGAAGAGTGGAGTTAGGATAAGAAGACACAAGGTGTGAATGTTACTCCTCTTGCAGTAATGTGGGTCATTTGGAAAGAGAGAAATAGGAGAGCTATTGAAAGGGTGGAGAATTGGAGATTAGCTTTGCTCAATTGAGGAGTAGTCTCCGATCCCTTATTTTCTTTTGGTGTAATTTTTGTTTGTATAGAGGATTGAGGTGTCTTTTGGAGAACCATGTTTGGTAGGTTTCTCCTTTTGTGGTATACTCCTTTTATATGACCAAGATAGCCTTGTTATTATCAATTAAATCTTTTACTTGGTCATAGACCAGATAAATTTTTACTTTGTTAGTAGATCGAGTGCTCCATAACTCTATATCATTTGTCATTTCTCTTTATCAAGGCTATAAACATACTTTTATCTTGTTTCATAGTCGCAAAAATCCCAAGTTCCTCAACTTTGGAATTTGCATGAAGATTGAATGATATTTTGCTTCTGTTGCTCTGTATCAATACTATAAATGTACTTTTATCTTGTTTCATAGTCACAGATCCCAAGTTCCTCAACTTTGGAACTTGCATGAAGATTGTAGTATATTTTGCCTTTGCTTGCAAAAACCTGAACAATTAATAGCTTGCCACCATAAAACTACACTAAAATGATTGCGCCCTATCTATGTTTTCAATATTCTAGTCTTTTCTCATTCTTGAGAGGTGGAGTATAGAACCTCTTATGTCTGCATACACTCCAAGTCTCTGATAGCTCTTTTGCAGGGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTAGTAAGTTTATATTATTTTGCACCAGCAATAAGCTGCCAAAGTACTGTATGAAATAATGAGTTGGAATTTAAAGAATGTAATGCTATAAGAGCCTATGTCTATTGGTTACTTGAGGACTTGCACTATATTTATTCCCATAAAGTAATCATCCGAGAACAATATTACTCCTGTTTCAAAAATAATTGGAGGGGTCTAGCGTAAGTGGGTCAAACCTGTTAATTTCCGGTCTCAATTCATACATCAGTTTCTTATGTCTAGAACAATCTTATATAGTTAGAAACTGGAAAAAAGAAAACTATAAATTACACATTCTAATATGAAAATATTTTTGGTCAAAGAAAAGGTTATTTGACTGCTTAGAAGTATGTCATGTAAAGTGGAACCCAGGGGGGTTGGGTATGAGTTAGGTAACTCTACATGCACTTTCTTCTTTATAACTACTAATCAAAAACTCTACGTACACTTTCACAGCCTAGTTTCCCGTCAATTTCCAGGAAGTTGAAGATATTCATATGTTTTTATTTATTGGTCAGGGTGTTGCAGATGCTAAAACATTTTGGTCTCCATTTGGCAGGTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAGGTAGTCTCTTCCCCAGCTAAGTTTACGGTGATTCATAAGCCCATGTAGTAGTTATCAAAAGTTATGTAAACTTGACTTGTGCTGTACTGGGTTTAAGCCTACTGCATTTGGTCCGTCTCTTTCTCTTACTGCTGGCCCTTGCTTTTGTGATGCTAGTGTTCCAATGTGAATCAAGTTTCTCAGATGTGTTGCTGCAAGTTTTGACCTTTATCTGTTGGACATTCTGAGAAAGGACTTGAAATCACAGAACACCAGTTCTTCCTCTTGGCTTGATCTTTCTTCCCTCCAAGGGTGTAGAGACAATTACATGTTAATGCAGAAAATTCATGTGTAATGCATATATTTCTCCTAACTTGATTTTCTTGTGGTATGAGTAAATAACCATTTCCTCTTAAACTTAGAGATGCTCTTGAAGTATGGGTGAATGCTTCTGCTTCTCAGGACAAGTCTTTAACTCTAATTTGCCAAAGCTCTTCATATCTATTCAATTCATCCGTATTCTTGATCGTGCATGTAACCGGCCTCTTGTTTCTGGAATTAGTTGCAAAGAGTTCACCTGTTAAAGAAAAGTAATTAGTTGCTCAATGCATTGAGTCATATTCCTACTGGGGCATTCAGCATGATGGGTTCCATACTGTTAACACTTTTGAACTCTCCCAAGTTCCCATGGTTACACTTTTGCTTCATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATGGTGAGTACAAATTAGTGAGTTGGCTTTGCTGGCATTCAGTAAGAAAAGGCTTGAATTTCCAATATGAACTTTTCTCAGTGTCAAAGTTTTCGTGTTTGTCATATAGGAACT</genome_strand>
        <mrna_strand>AGTAATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAG.............................................................................................................................................GTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATG..........................................................................................................GAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428200" ref_strand="+" ref_description="SGN-E428200 [STM-49-L20]">
      <seq>attatcttcaggttctgtggatcaaacagctcgtatttggcaaattgagcctcatggtcatggaaaggtaaaagatgttgaattaaagggtcacaccgacagtgtggaccagttatgttgggatccaaaacatgcagaattgatagctacagcatctggagacaagacagttcgattatgggatgcccgtagtgggaaatgctcacagcaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatatatctgttgggaacagggatgatgagctaacaatattggatgttcgcaagtttaaacctattcataagcgcaaatttaattatgaaggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="38600" stop="34645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38300" g_stop="38240" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38239" i_stop="36086" i_length="2154">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36085" g_stop="35956" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="191" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574">
            <donor d_prob="0.918" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35381" g_stop="35290" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="283" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35018" g_stop="34950" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="352" r_length="69" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E428200" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E428200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38300" e_stop="38240"/>
          <exon e_start="36085" e_stop="35956"/>
          <exon e_start="35381" e_stop="35290"/>
          <exon e_start="35018" e_stop="34950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCATGTAAGCTTCATGAGCTCATCTTTTTTGTTTTCAGTTAAGTTTTAATGCTGAAAAAAGGATAGCTTTTTGTTATTGCTCTGATTTTTAAATGTTCTACTGAAGTGGTGGGAAACTGGGTGTTGTAAATAAACTGAAAAAAGGATAGCTTTTTATGATATATGCATGAACTTAGGCACCTGAGATTTTCTCTAGAGTTAAGAAGCTGGTCTCTCACTTTAGTTGTTTCTGCCAAAGTCTAGTTCTATGTGGTATGAGTTAAGGAACCTATGATAGTAATGCCTGTTGCAGTTAGGTTTAAATTTTGTTGTTACTTATCAAAGGTGGGGTAAAGTAAGCGTAACCTCACTTGTGGGAGGTCATACGAATTCGATGTTATAGATACACAGAGAGGTTTGAATTGGGAGAATGGGTAAAAAGATGCAGAAATGCTCCAGAGTTGTACAGGATGGTAAAATATCGCATGTCCCAGCTCAACGCACTTGGTGTGGAGTTATAGAAAAGCTGGAAAGGTAGCAAAGGAACATTTGGGATGCGGCGGATGGGACAAAGAAGTTTCACCTAGTGGGACGGGAGACCGTGACATCTCCTAAACAGTGGTGAGGACTTGGGGTTAAAGACTTGAAGGTTTTTAACAAAGTCCTCTTGGATAAATGGCTTTGGAGATTCGAGATGGAGGAAGAAGCTTTATGGGAGGGGTGATAGCGGACAAATATGGAGTTATGGAAGGAAGATGGAGAACAAATGTGGTTACCTTCCGAGTTTGGCATGTAGAAGAATATAATGAAGGGGTGGGAAGCCTTTAACAAAAACATTTTCTTTTAAGTTTGGGGTTGGGAGGAGACTAGTTTTTGGGGGTCAAAAGTGGTGCAGTGATTTGGTTAAAGAATGATTTCTTGGTGTTGTATAGCATTTCTGGGCAAAGGGAGCTGTCTGTTCAGCAAATTAGGGGGTGGGACCTTCTGGGATTTCCGAAATTGGGAGATGACCGATCTTCAAAGCTTTCTAGTTTTATACCATAAGCAATGCAAACCAGTAGATAGACCTGATGCTTTGAGTTGGGAGTTGGTGAATAAAAAAGTGTTCTCTATTAAGTCCTATAAAAGCTTCCTGTTAGGGTGGAAGTTAGTTTTCTGTATGACTCGGTATGGACACCTAAGGTGCTGAAGAAGGTGTATTTCTTCTTGTGGTTAGCTACTAAAGGGGTGATATTGACGGTGAAGAATCTTAGGGAATGAAAGGTGGTGGGCATAAGTTGTTGTTTCTTGTGTCAAGAGGCAGGAGAGGACATGATCAATATTTTGCTACATTGCAAAACATCTCGAGGTTATGGTAGGATATCTTTAGATGGTTTGATATTTCTTGGGCAATCCCAAATGTCTGTTGAAGTGTTGATGTTCAGTTGGAAGAGTGGAGTTAGGATAAGAAGACACAAGGTGTGAATGTTACTCCTCTTGCAGTAATGTGGGTCATTTGGAAAGAGAGAAATAGGAGAGCTATTGAAAGGGTGGAGAATTGGAGATTAGCTTTGCTCAATTGAGGAGTAGTCTCCGATCCCTTATTTTCTTTTGGTGTAATTTTTGTTTGTATAGAGGATTGAGGTGTCTTTTGGAGAACCATGTTTGGTAGGTTTCTCCTTTTGTGGTATACTCCTTTTATATGACCAAGATAGCCTTGTTATTATCAATTAAATCTTTTACTTGGTCATAGACCAGATAAATTTTTACTTTGTTAGTAGATCGAGTGCTCCATAACTCTATATCATTTGTCATTTCTCTTTATCAAGGCTATAAACATACTTTTATCTTGTTTCATAGTCGCAAAAATCCCAAGTTCCTCAACTTTGGAATTTGCATGAAGATTGAATGATATTTTGCTTCTGTTGCTCTGTATCAATACTATAAATGTACTTTTATCTTGTTTCATAGTCACAGATCCCAAGTTCCTCAACTTTGGAACTTGCATGAAGATTGTAGTATATTTTGCCTTTGCTTGCAAAAACCTGAACAATTAATAGCTTGCCACCATAAAACTACACTAAAATGATTGCGCCCTATCTATGTTTTCAATATTCTAGTCTTTTCTCATTCTTGAGAGGTGGAGTATAGAACCTCTTATGTCTGCATACACTCCAAGTCTCTGATAGCTCTTTTGCAGGGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTAGTAAGTTTATATTATTTTGCACCAGCAATAAGCTGCCAAAGTACTGTATGAAATAATGAGTTGGAATTTAAAGAATGTAATGCTATAAGAGCCTATGTCTATTGGTTACTTGAGGACTTGCACTATATTTATTCCCATAAAGTAATCATCCGAGAACAATATTACTCCTGTTTCAAAAATAATTGGAGGGGTCTAGCGTAAGTGGGTCAAACCTGTTAATTTCCGGTCTCAATTCATACATCAGTTTCTTATGTCTAGAACAATCTTATATAGTTAGAAACTGGAAAAAAGAAAACTATAAATTACACATTCTAATATGAAAATATTTTTGGTCAAAGAAAAGGTTATTTGACTGCTTAGAAGTATGTCATGTAAAGTGGAACCCAGGGGGGTTGGGTATGAGTTAGGTAACTCTACATGCACTTTCTTCTTTATAACTACTAATCAAAAACTCTACGTACACTTTCACAGCCTAGTTTCCCGTCAATTTCCAGGAAGTTGAAGATATTCATATGTTTTTATTTATTGGTCAGGGTGTTGCAGATGCTAAAACATTTTGGTCTCCATTTGGCAGGTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAG</genome_strand>
        <mrna_strand>ATTATCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGAGACAAGACAGTTCGATTATGGGATGCCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATATCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATATTGGATGTTCGCAAGTTTAAACCTATTCATAAGCGCAAATTTAATTATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337474" ref_strand="+" ref_description="SGN-E337474 [cTOE-11-D19]">
      <seq>gcggaaacaatacccttcaaaaatcttcatagcagagagtaccagggacacaagaagaaggtgcattcggtggcatggaactgcagtggcacgaaattagcttcaggttctgtggatcaaacagctcgtatttggcaaattgagcctcatggtcatggaaaggtaaaagatgttgaattaaagggtcacaccgacagtgtggaccagttatgttgggatccaaaacatgcagaattgatagctacagcatctggtgacaagacagttcgattatgggatgcccgtagtgggaaatgctcacagcaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatatagctgttgggaacagggatgatgagctaacaatcttggatgttcgcaagttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="38836" stop="34682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38536" g_stop="38477" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38476" i_stop="38336" i_length="141">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38335" g_stop="38240" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="156" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38239" i_stop="36086" i_length="2154">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36085" g_stop="35956" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="286" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35381" g_stop="35290" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="378" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="35018" g_stop="34982" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="415" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E337474" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38536" e_stop="38477"/>
          <exon e_start="38335" e_stop="38240"/>
          <exon e_start="36085" e_stop="35956"/>
          <exon e_start="35381" e_stop="35290"/>
          <exon e_start="35018" e_stop="34982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAGGTTTCTCTCTCTAAAACTATTCCTTCACTTCATTGTTAACAATACAACCCTAATTTTGCTTTTCCTTTTTATGAACTCTCTGATTAGATGAATTGACTATGTGATACTTTATCTTCTCTGTTTTTTTAAAAAAAATTAAAGGTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCATGTAAGCTTCATGAGCTCATCTTTTTTGTTTTCAGTTAAGTTTTAATGCTGAAAAAAGGATAGCTTTTTGTTATTGCTCTGATTTTTAAATGTTCTACTGAAGTGGTGGGAAACTGGGTGTTGTAAATAAACTGAAAAAAGGATAGCTTTTTATGATATATGCATGAACTTAGGCACCTGAGATTTTCTCTAGAGTTAAGAAGCTGGTCTCTCACTTTAGTTGTTTCTGCCAAAGTCTAGTTCTATGTGGTATGAGTTAAGGAACCTATGATAGTAATGCCTGTTGCAGTTAGGTTTAAATTTTGTTGTTACTTATCAAAGGTGGGGTAAAGTAAGCGTAACCTCACTTGTGGGAGGTCATACGAATTCGATGTTATAGATACACAGAGAGGTTTGAATTGGGAGAATGGGTAAAAAGATGCAGAAATGCTCCAGAGTTGTACAGGATGGTAAAATATCGCATGTCCCAGCTCAACGCACTTGGTGTGGAGTTATAGAAAAGCTGGAAAGGTAGCAAAGGAACATTTGGGATGCGGCGGATGGGACAAAGAAGTTTCACCTAGTGGGACGGGAGACCGTGACATCTCCTAAACAGTGGTGAGGACTTGGGGTTAAAGACTTGAAGGTTTTTAACAAAGTCCTCTTGGATAAATGGCTTTGGAGATTCGAGATGGAGGAAGAAGCTTTATGGGAGGGGTGATAGCGGACAAATATGGAGTTATGGAAGGAAGATGGAGAACAAATGTGGTTACCTTCCGAGTTTGGCATGTAGAAGAATATAATGAAGGGGTGGGAAGCCTTTAACAAAAACATTTTCTTTTAAGTTTGGGGTTGGGAGGAGACTAGTTTTTGGGGGTCAAAAGTGGTGCAGTGATTTGGTTAAAGAATGATTTCTTGGTGTTGTATAGCATTTCTGGGCAAAGGGAGCTGTCTGTTCAGCAAATTAGGGGGTGGGACCTTCTGGGATTTCCGAAATTGGGAGATGACCGATCTTCAAAGCTTTCTAGTTTTATACCATAAGCAATGCAAACCAGTAGATAGACCTGATGCTTTGAGTTGGGAGTTGGTGAATAAAAAAGTGTTCTCTATTAAGTCCTATAAAAGCTTCCTGTTAGGGTGGAAGTTAGTTTTCTGTATGACTCGGTATGGACACCTAAGGTGCTGAAGAAGGTGTATTTCTTCTTGTGGTTAGCTACTAAAGGGGTGATATTGACGGTGAAGAATCTTAGGGAATGAAAGGTGGTGGGCATAAGTTGTTGTTTCTTGTGTCAAGAGGCAGGAGAGGACATGATCAATATTTTGCTACATTGCAAAACATCTCGAGGTTATGGTAGGATATCTTTAGATGGTTTGATATTTCTTGGGCAATCCCAAATGTCTGTTGAAGTGTTGATGTTCAGTTGGAAGAGTGGAGTTAGGATAAGAAGACACAAGGTGTGAATGTTACTCCTCTTGCAGTAATGTGGGTCATTTGGAAAGAGAGAAATAGGAGAGCTATTGAAAGGGTGGAGAATTGGAGATTAGCTTTGCTCAATTGAGGAGTAGTCTCCGATCCCTTATTTTCTTTTGGTGTAATTTTTGTTTGTATAGAGGATTGAGGTGTCTTTTGGAGAACCATGTTTGGTAGGTTTCTCCTTTTGTGGTATACTCCTTTTATATGACCAAGATAGCCTTGTTATTATCAATTAAATCTTTTACTTGGTCATAGACCAGATAAATTTTTACTTTGTTAGTAGATCGAGTGCTCCATAACTCTATATCATTTGTCATTTCTCTTTATCAAGGCTATAAACATACTTTTATCTTGTTTCATAGTCGCAAAAATCCCAAGTTCCTCAACTTTGGAATTTGCATGAAGATTGAATGATATTTTGCTTCTGTTGCTCTGTATCAATACTATAAATGTACTTTTATCTTGTTTCATAGTCACAGATCCCAAGTTCCTCAACTTTGGAACTTGCATGAAGATTGTAGTATATTTTGCCTTTGCTTGCAAAAACCTGAACAATTAATAGCTTGCCACCATAAAACTACACTAAAATGATTGCGCCCTATCTATGTTTTCAATATTCTAGTCTTTTCTCATTCTTGAGAGGTGGAGTATAGAACCTCTTATGTCTGCATACACTCCAAGTCTCTGATAGCTCTTTTGCAGGGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTAGTAAGTTTATATTATTTTGCACCAGCAATAAGCTGCCAAAGTACTGTATGAAATAATGAGTTGGAATTTAAAGAATGTAATGCTATAAGAGCCTATGTCTATTGGTTACTTGAGGACTTGCACTATATTTATTCCCATAAAGTAATCATCCGAGAACAATATTACTCCTGTTTCAAAAATAATTGGAGGGGTCTAGCGTAAGTGGGTCAAACCTGTTAATTTCCGGTCTCAATTCATACATCAGTTTCTTATGTCTAGAACAATCTTATATAGTTAGAAACTGGAAAAAAGAAAACTATAAATTACACATTCTAATATGAAAATATTTTTGGTCAAAGAAAAGGTTATTTGACTGCTTAGAAGTATGTCATGTAAAGTGGAACCCAGGGGGGTTGGGTATGAGTTAGGTAACTCTACATGCACTTTCTTCTTTATAACTACTAATCAAAAACTCTACGTACACTTTCACAGCCTAGTTTCCCGTCAATTTCCAGGAAGTTGAAGATATTCATATGTTTTTATTTATTGGTCAGGGTGTTGCAGATGCTAAAACATTTTGGTCTCCATTTGGCAGGTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTA</genome_strand>
        <mrna_strand>GCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAG.............................................................................................................................................GTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322791" ref_strand="+" ref_description="SGN-E322791 [cTOB-30-M3]">
      <seq>gagtaatggcggaaacaatacccttcaaaaatcttcatagcagagagtaccagggacacaagaagaaggtgcattcggtggcatggaactgcagtggcacgaaattagcttcaggttctgtggatcaaacagctcgtatttggcaaattgagcctcatggtcatggaaaggtaaaagatgttgaattaaagggtcacaccgacagtgtggaccagttatgttgggatccaaaacatgcagaattgatagctacagcatctggtgacaagacagttcgattatgggatgcccgtagtgggaaatgctcacagcaagttgaactcagtggggaaaatatcaatatcacttacaagcctgatgggacacatatagctgttgggaacagggatgatgagctaacaatcttggatgttcgcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="38844" stop="34686"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38544" g_stop="38477" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38476" i_stop="38336" i_length="141">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38335" g_stop="38240" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="164" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38239" i_stop="36086" i_length="2154">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36085" g_stop="35956" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="294" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35381" g_stop="35290" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="386" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="35018" g_stop="34986" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="419" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E322791" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38544" e_stop="38477"/>
          <exon e_start="38335" e_stop="38240"/>
          <exon e_start="36085" e_stop="35956"/>
          <exon e_start="35381" e_stop="35290"/>
          <exon e_start="35018" e_stop="34986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTAATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAGGTTTCTCTCTCTAAAACTATTCCTTCACTTCATTGTTAACAATACAACCCTAATTTTGCTTTTCCTTTTTATGAACTCTCTGATTAGATGAATTGACTATGTGATACTTTATCTTCTCTGTTTTTTTAAAAAAAATTAAAGGTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCATGTAAGCTTCATGAGCTCATCTTTTTTGTTTTCAGTTAAGTTTTAATGCTGAAAAAAGGATAGCTTTTTGTTATTGCTCTGATTTTTAAATGTTCTACTGAAGTGGTGGGAAACTGGGTGTTGTAAATAAACTGAAAAAAGGATAGCTTTTTATGATATATGCATGAACTTAGGCACCTGAGATTTTCTCTAGAGTTAAGAAGCTGGTCTCTCACTTTAGTTGTTTCTGCCAAAGTCTAGTTCTATGTGGTATGAGTTAAGGAACCTATGATAGTAATGCCTGTTGCAGTTAGGTTTAAATTTTGTTGTTACTTATCAAAGGTGGGGTAAAGTAAGCGTAACCTCACTTGTGGGAGGTCATACGAATTCGATGTTATAGATACACAGAGAGGTTTGAATTGGGAGAATGGGTAAAAAGATGCAGAAATGCTCCAGAGTTGTACAGGATGGTAAAATATCGCATGTCCCAGCTCAACGCACTTGGTGTGGAGTTATAGAAAAGCTGGAAAGGTAGCAAAGGAACATTTGGGATGCGGCGGATGGGACAAAGAAGTTTCACCTAGTGGGACGGGAGACCGTGACATCTCCTAAACAGTGGTGAGGACTTGGGGTTAAAGACTTGAAGGTTTTTAACAAAGTCCTCTTGGATAAATGGCTTTGGAGATTCGAGATGGAGGAAGAAGCTTTATGGGAGGGGTGATAGCGGACAAATATGGAGTTATGGAAGGAAGATGGAGAACAAATGTGGTTACCTTCCGAGTTTGGCATGTAGAAGAATATAATGAAGGGGTGGGAAGCCTTTAACAAAAACATTTTCTTTTAAGTTTGGGGTTGGGAGGAGACTAGTTTTTGGGGGTCAAAAGTGGTGCAGTGATTTGGTTAAAGAATGATTTCTTGGTGTTGTATAGCATTTCTGGGCAAAGGGAGCTGTCTGTTCAGCAAATTAGGGGGTGGGACCTTCTGGGATTTCCGAAATTGGGAGATGACCGATCTTCAAAGCTTTCTAGTTTTATACCATAAGCAATGCAAACCAGTAGATAGACCTGATGCTTTGAGTTGGGAGTTGGTGAATAAAAAAGTGTTCTCTATTAAGTCCTATAAAAGCTTCCTGTTAGGGTGGAAGTTAGTTTTCTGTATGACTCGGTATGGACACCTAAGGTGCTGAAGAAGGTGTATTTCTTCTTGTGGTTAGCTACTAAAGGGGTGATATTGACGGTGAAGAATCTTAGGGAATGAAAGGTGGTGGGCATAAGTTGTTGTTTCTTGTGTCAAGAGGCAGGAGAGGACATGATCAATATTTTGCTACATTGCAAAACATCTCGAGGTTATGGTAGGATATCTTTAGATGGTTTGATATTTCTTGGGCAATCCCAAATGTCTGTTGAAGTGTTGATGTTCAGTTGGAAGAGTGGAGTTAGGATAAGAAGACACAAGGTGTGAATGTTACTCCTCTTGCAGTAATGTGGGTCATTTGGAAAGAGAGAAATAGGAGAGCTATTGAAAGGGTGGAGAATTGGAGATTAGCTTTGCTCAATTGAGGAGTAGTCTCCGATCCCTTATTTTCTTTTGGTGTAATTTTTGTTTGTATAGAGGATTGAGGTGTCTTTTGGAGAACCATGTTTGGTAGGTTTCTCCTTTTGTGGTATACTCCTTTTATATGACCAAGATAGCCTTGTTATTATCAATTAAATCTTTTACTTGGTCATAGACCAGATAAATTTTTACTTTGTTAGTAGATCGAGTGCTCCATAACTCTATATCATTTGTCATTTCTCTTTATCAAGGCTATAAACATACTTTTATCTTGTTTCATAGTCGCAAAAATCCCAAGTTCCTCAACTTTGGAATTTGCATGAAGATTGAATGATATTTTGCTTCTGTTGCTCTGTATCAATACTATAAATGTACTTTTATCTTGTTTCATAGTCACAGATCCCAAGTTCCTCAACTTTGGAACTTGCATGAAGATTGTAGTATATTTTGCCTTTGCTTGCAAAAACCTGAACAATTAATAGCTTGCCACCATAAAACTACACTAAAATGATTGCGCCCTATCTATGTTTTCAATATTCTAGTCTTTTCTCATTCTTGAGAGGTGGAGTATAGAACCTCTTATGTCTGCATACACTCCAAGTCTCTGATAGCTCTTTTGCAGGGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTAGTAAGTTTATATTATTTTGCACCAGCAATAAGCTGCCAAAGTACTGTATGAAATAATGAGTTGGAATTTAAAGAATGTAATGCTATAAGAGCCTATGTCTATTGGTTACTTGAGGACTTGCACTATATTTATTCCCATAAAGTAATCATCCGAGAACAATATTACTCCTGTTTCAAAAATAATTGGAGGGGTCTAGCGTAAGTGGGTCAAACCTGTTAATTTCCGGTCTCAATTCATACATCAGTTTCTTATGTCTAGAACAATCTTATATAGTTAGAAACTGGAAAAAAGAAAACTATAAATTACACATTCTAATATGAAAATATTTTTGGTCAAAGAAAAGGTTATTTGACTGCTTAGAAGTATGTCATGTAAAGTGGAACCCAGGGGGGTTGGGTATGAGTTAGGTAACTCTACATGCACTTTCTTCTTTATAACTACTAATCAAAAACTCTACGTACACTTTCACAGCCTAGTTTCCCGTCAATTTCCAGGAAGTTGAAGATATTCATATGTTTTTATTTATTGGTCAGGGTGTTGCAGATGCTAAAACATTTTGGTCTCCATTTGGCAGGTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGGGTACTCATTATTTCTGTCATTTATTAATTCCTAAAATAAGCACTTCTATATTCTATTATCTTAGCTGCTTATAGATATGTATGTAGTCAAAATGAGTGCAGACAAAAACAGAAATGTATCTTAGCTTCATCTCTTTCTATTGCATGTATTTTCTATCATTCATATTTATGATGGTGAGTTTTATTGGTGATATTCTGTGGAGTTCCGTACTATCTGCTTATCATGGAGATTAATTTGGTGCATATTCTTATTCAGTTTTTTTATGGTACAGGATGATGAGCTAACAATCTTGGATGTTCGCAAG</genome_strand>
        <mrna_strand>GAGTAATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAG.............................................................................................................................................GTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG...............................................................................................................................................................................................................................................................................GATGATGAGCTAACAATCTTGGATGTTCGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E479501" ref_strand="+" ref_description="SGN-E479501 [cSTD-10-O11]">
      <seq>aattgatgaatataattataacatgacaagtgaagtgatatagatttgatggtctcgtttatgtgaagattattgaatattaagtaggtcattgccagtccaaaagaagggaaacagaagggactcctttttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtaccatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcaaaatggggcttgacatgctagccccctggcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40038" stop="45003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40333" g_stop="40364" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.812"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40365" i_stop="40420" i_length="56">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40421" g_stop="40474" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="87" r_length="55" r_score="0.870"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40475" i_stop="41018" i_length="544">
            <donor d_prob="0.726" d_score="0.88"/>
            <acceptor a_prob="0.811" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41019" g_stop="41224" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="297" r_length="210" r_score="0.942"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="383" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44622" g_stop="44703" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="465" r_length="82" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E479501" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E479501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40333" e_stop="40364"/>
          <exon e_start="40421" e_stop="40474"/>
          <exon e_start="41019" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAATAAATATAATTATAACATGACAAGTGATATAAATTTAATGTGTCACAATATATTTATTTTGTTAAATACAATATAACATGACGAGTGATATAGATCTGATA-TCTCATTTATGTGAAGATTATTGAATATCAAGTAGGTATATAAATCAATAATGAAAAATTTTATATATTTTTTAAAAATTAAAACTTTATCATTCATCTATTAAAAAAGTGAAACTATTTTGTGCTCGCATATAGAAACACATTTTTAAAATCATAGAGAATTGAGAAGAAAACAAGTTTAGTGTTGTCATTATACTCGACTTAAGTCAAATAATTTGATTAATCGATAATCTTTTTAATGTTAATTTTACAAATAATAGATTTTATATTTTTTTGTAAAATACCATTACTTCAATCAAATGTATATTATGGAAGAAATTAATACCTCAAAATCTTAAATATAATAAAAGGATTTAATTCTTTAAGAATGCACACGAAATTTTATGGCTTAGATAATTATTTAAGGTTTTTAGATTATTTTACATATTATAATTTACTATGTAGACTATAGGATATTTAGATGAAACTTTATTCTTAATATAATTTTTTTTGAATTAATTTAAATTAATCGAATTTTAATGCGGATATCGAATTCATTCCCTTATCCACCGACGATTATATTAAATCTACTAATAACAGGTCATTGCCAGTCCAAAAGAAG--AAACAGA-GGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATA-CATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTC</genome_strand>
        <mrna_strand>AATTGATGAATATAATTATAACATGACAAGTG........................................................AAGTGATATAGATTTGATGGTCTCGTTTATGTGAAGATTATTGAATATTAAGTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATTGCCAGTCCAAAAGAAGGGAAACAGAAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACCATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAAAATGGGGCTTGACATGCTAGCCCCCTGGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719778" ref_strand="+" ref_description="SGN-E719778 [FC08DD09]">
      <seq>cggccgaattgagtccaaaagaagaaacagagggactcctttttggaaagtgaaaagtaggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaaatatcaggtttaatgcactccccgtcgactcataactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagttacaatttcgtgggccgacttctgggccctagagggaactctctaaagcgggtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccgggatatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40728" stop="47121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41019" g_stop="41224" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="208" r_length="203" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="294" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="440" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="560" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="677" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46821" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="810" r_length="133" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E719778" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E719778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41019" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
          <exon e_start="46689" e_stop="46821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATTGCCAGTCCAAAAGAAGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGC</genome_strand>
        <mrna_strand>G-AATTG--AGTCCAAAAGAAGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCATAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478422" ref_strand="+" ref_description="SGN-E478422 [cSTD-4-D10]">
      <seq>aaagaaggaaacagagggactcctttttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccttttcaatcagaaatatcaggtttaatgcactccccatcgactcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagttacaatttcgtgggccgactcctgngccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcnaaccagggtatgagcacctgaatgagcctcttcatgttattgtggaagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40734" stop="47059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41034" g_stop="41224" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="278" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="424" r_length="146" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="544" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="661" r_length="117" r_score="0.974"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46759" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="732" r_length="71" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E478422" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E478422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41034" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
          <exon e_start="46689" e_stop="46759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAA-GAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGA</genome_strand>
        <mrna_strand>AAAGAAGGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCTTTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTCCTGNGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCNAACCAGGGTATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455722" ref_strand="+" ref_description="SGN-E455722 [cSTS-27-I23]">
      <seq>ggaaacagagggactcctttttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccttttcaatcagaaatatcaggtttaatgcactccccatcgactcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagttacaatttcgtgggccgactcctgngccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccagggtatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40740" stop="47097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41039" g_stop="41224" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="272" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="418" r_length="146" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="538" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="655" r_length="117" r_score="0.974"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46796" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="656" r_stop="763" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E455722" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E455722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41039" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
          <exon e_start="46689" e_stop="46796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAA</genome_strand>
        <mrna_strand>GGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCTTTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTCCTGNGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCAGGGTATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486017" ref_strand="+" ref_description="SGN-E486017 [cSTE-20-J1]">
      <seq>ggaaacagagggactcctttttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggatatcaggtttaatgcactccccatcgactcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgactcctgngccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccanggtatgagcacctgaatgaacctcttcatgttattgtggaagctgaactgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40740" stop="47065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41039" g_stop="41224" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="272" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="45608" i_length="2902">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="392" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="521" r_length="129" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46689" g_stop="46765" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="598" r_length="77" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E486017" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41039" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCC</genome_strand>
        <mrna_strand>GGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTCCTGNGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCANGGTATGAGCACCTGAATGAACCTCTTCATGTTATTGTGGAAGCTGAACTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720331" ref_strand="+" ref_description="SGN-E720331 [FC10CA08]">
      <seq>gggcgattggcggccaatcggccgaattgagaaacagagggactcctttttggaaagtgaaaagtaggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcaaagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaaatatcaggtttaatgcactccccgtcgactcagaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgacttctgggccctagagggaactctctaaagcgggtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccgggatatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctgctcaagcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgaacttgcaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40729" stop="47295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41041" g_stop="41224" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="215" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="301" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="447" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="567" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="696" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="840" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46944" g_stop="46995" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="841" r_stop="892" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E720331" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41041" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="46995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGC</genome_strand>
        <mrna_strand>AAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAAAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E579544" ref_strand="+" ref_description="SGN-E579544 [86674]">
      <seq>agagggactcctttttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggatatcaggtttaatgcactccccatcgactcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagttacaatttcgtgggccgactcctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgatacgaggacgcggaagcatcaaagatccagtaaaggaagaattgatgagaggcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40745" stop="46241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41045" g_stop="41224" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="266" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="45608" i_length="2902">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="386" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="503" r_length="117" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E579544" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E579544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41045" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG</genome_strand>
        <mrna_strand>AGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTCCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATACGAGGACGCGGAAGCATCAAAGATCCAGTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484661" ref_strand="+" ref_description="SGN-E484661 [cSTE-14-A24]">
      <seq>gggactcctttttggaaagtgaaaagtaagtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccatctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcagggtgagtaggaagttgaattttgattagttcagccacttgtgcttctgatatcaaaaaatattttttattgctcaacacgagagaagtcaaagattagagaatgaggttgaaaaatattttacgttgatgggtacatccttttcatctgaataaagatgataaatccattgtatacttctgtttttgctaattgggtggaagtttaggtcaagttcgggtcttctatgttaagtnggtcagcactttttctggacgactcccaacactatttgtatattccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40748" stop="43289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41048" g_stop="41224" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42989" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="546" r_length="369" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E484661" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41048" e_stop="41224"/>
          <exon e_start="42621" e_stop="42989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGG-TGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATG</genome_strand>
        <mrna_strand>GGGACTCCTTTTTGGAAAGTGAAAAGTAAGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAATATTTTTTATTGCTCAACACGAGAGAAGTCAAAGATTAGAGAATGAGGTTGAAAAATATTTTACGTTGATGGGTACATCCTTTTCATCTGAATAAAGATGATAAATCCATTGTATACTTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTCGGGTCTTCTATGTTAAGTNGGTCAGCAC-TTTTTCTGGACGACTCCCAACACTATTTGTATATTCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426987" ref_strand="+" ref_description="SGN-E426987 [STM-47-H1]">
      <seq>gtgactcctttttggaaagtgaaaagtaagtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccatctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcagggtgagtaggaagttgaattttgattagttcagccacttgtgcttctgatatcaaaaaatattttttattgctcaacacgagagaagtcaaagattagagaatgaggttgaaaaatattttacgttgatgggtacatccttttcatctgaataaagatgataaatccattgtatacttctgtttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40748" stop="43191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41048" g_stop="41224" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42891" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="449" r_length="272" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E426987" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E426987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41048" e_stop="41224"/>
          <exon e_start="42621" e_stop="42891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGG-TGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTG</genome_strand>
        <mrna_strand>GTGACTCCTTTTTGGAAAGTGAAAAGTAAGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAATATTTTTTATTGCTCAACACGAGAGAAGTCAAAGATTAGAGAATGAGGTTGAAAAATATTTTACGTTGATGGGTACATCCTTTTCATCTGAATAAAGATGATAAATCCATTGTATACTTCTGTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E481363" ref_strand="+" ref_description="SGN-E481363 [cSTD-17-N22]">
      <seq>ggactcctttttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggaccttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggatatcaggtttaatgcactccccatcgactcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgactcctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccagggtatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagaattgggaagatctactcangcctatggnatgagtcacaggatttctacaaaaacagcagttgcgtgagcttgcatgctcaatggtactcttcgtgaagaaattctcaatggtctggnttctgtttcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40749" stop="47347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41049" g_stop="41224" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="263" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="45608" i_length="2902">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="383" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="512" r_length="129" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="656" r_length="144" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.90"/>
            <acceptor a_prob="0.992" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46944" g_stop="47047" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="759" r_length="103" r_score="0.885"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E481363" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E481363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41049" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGA-CTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGG-ATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGG-TTCTGTTTCCCC</genome_strand>
        <mrna_strand>GGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACCTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTCCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCAGGGTATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGAATTGGGAAGATCTACTCANGCCTATG...............................................................................................................GNATGAGTCACAGGATTTCTAC-AAAAACAGCAGTTGCGTGAGCTTGC-ATGCTCAATGGTACTCTTCGTGAAGAA-ATTCTCAATGGTCTGGNTTCTGTTTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448155" ref_strand="+" ref_description="SGN-E448155 [cSTS-1-L6]">
      <seq>ctccttgttggaaagtgaaaagtaggtgaatctggccgtcatcggattctatcgccgccggggaagatgtcgtccggaaggtacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcacttttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgctttcaaatggaggagctaatgtggacagatgggcatcaccttttcaatcagaaatatcaggtgtaatgcactccccatcgactcaaaactggcttaatactcacagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggaggatcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40752" stop="46020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41052" g_stop="41224" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="259" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="405" r_length="146" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45720" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="517" r_length="112" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E448155" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41052" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAAT</genome_strand>
        <mrna_strand>CTCCTTGTTGGAAAGTGAAAAGTAGGTGAATCTGGCCGTCATCGGATTCTATCGCCGCCGGGGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCACTTTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGCTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCTTTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTGTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCACAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGAGGATCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323339" ref_strand="+" ref_description="SGN-E323339 [cTOC-10-I15]">
      <seq>ctttttggaaagtgaaaagtaggtgaatctggcagtcggcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaagtatggatactaactattaacataacctcttttagatctgattttatatgtttgaaaagcttttctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40755" stop="45135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41055" g_stop="41224" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="256" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44835" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="470" r_length="214" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E323339" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41055" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGA</genome_strand>
        <mrna_strand>CTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCGGCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273012" ref_strand="+" ref_description="SGN-E273012 [cLEM-25-H17]">
      <seq>tttttggaaagtgaaaagtaggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaaatatcaggtttaatgcactccccgtcgactcagaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagttacaatttcgtgggccgacttctgggccctagagggaactctctaaagcgggtggaagctactactgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40756" stop="46183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41056" g_stop="41224" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="255" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="401" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="521" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45883" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="592" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E273012" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273012" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41056" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATG</genome_strand>
        <mrna_strand>TTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307138" ref_strand="+" ref_description="SGN-E307138 [cLEY-15-I13]">
      <seq>tttttggaaagtgaaaagtaggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaagtatggatactaactattaacataacctcttttagatctgattttatatgtttgaaaagcttttctgacaaaggtttctaatttccatgctaacttgatttcttattaagtgttttaacttcaatctccacttgtctcgtgacaggtaggtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40756" stop="45221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41056" g_stop="41224" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="255" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44921" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="555" r_length="300" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E307138" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41056" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAA</genome_strand>
        <mrna_strand>TTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307688" ref_strand="+" ref_description="SGN-E307688 [cLEY-16-E3]">
      <seq>tttttggaaagtgaaaagtaggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaagtatggatactaactattaacataacctcttttagatctgattttatatgtttgaaaagcttttctgacaaaggtttctaatttccatgctaacttgatttcttattaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40756" stop="45177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41056" g_stop="41224" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="255" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44877" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="511" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E307688" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41056" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAG</genome_strand>
        <mrna_strand>TTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299732" ref_strand="+" ref_description="SGN-E299732 [cLEW-1-F4]">
      <seq>tttggaaagtgaaaagtaggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaagtaggtgaagctaacaacaacaagatatcaggtttaatgcactccccgtcgactcagaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40758" stop="46009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41058" g_stop="41224" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="253" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="399" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="44912" i_length="145">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44913" g_stop="44936" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="423" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44937" i_stop="45608" i_length="672">
            <donor d_prob="0.899" d_score="0.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45609" g_stop="45709" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="524" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E299732" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41058" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="44913" e_stop="44936"/>
          <exon e_start="45609" e_stop="45709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACC</genome_strand>
        <mrna_strand>TTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA.................................................................................................................................................GTAGGTGAAGCTAACAACAACAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249595" ref_strand="+" ref_description="SGN-E249595 [cLEF-56-C6]">
      <seq>aagtgggtgaatctggcagtcatcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggatatcaggtttaatgcactccccgtcgactcagaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgacttctgggccctagagggaactctctaaagcgggtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccgggatatgagcacctgaatgagcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40771" stop="47036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41071" g_stop="41224" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="240" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="45608" i_length="2902">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="360" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="489" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46689" g_stop="46736" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="537" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E249595" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41071" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCT</genome_strand>
        <mrna_strand>AAGTGGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412388" ref_strand="+" ref_description="SGN-E412388 [STM-16-O11]">
      <seq>cgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccatctgctcctcagtctcctcatatcgccggactacgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcagaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcattcagaaatatcaggtttaatgcactccccgtcgactcaaaactggcttaatactcaaagtaactcatccggcctcatagtgaagcgaacactcagaattgatataccagtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgactcctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccnnggttctgataagagggacgcgaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaacccggggtatgagcacctgaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40789" stop="47032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41088" g_stop="41224" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="223" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="369" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="489" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="619" r_length="130" r_score="0.938"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="0.88"/>
            <acceptor a_prob="0.994" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46732" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="664" r_length="45" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E412388" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41088" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCC-GGGTTCTGATAAGA-GGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAA-CCGGGATATGAGCACCTGAATGA</genome_strand>
        <mrna_strand>CGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCATATCGCCGGACTACGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCATTCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCCGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCAGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTCCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCNNGGTTCTGATAAGAGGGACGC-GAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCCGGGGTATGAGCACCTGAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470520" ref_strand="+" ref_description="SGN-E470520 [cSTB-18-F17]">
      <seq>cgtcatcggattctatcgccgccggtgaagatgtcgtccggaaggtacatggcctactcaccatctccatctgctcctcagtctcctcatatcgccggactacgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcagaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcattcagaaatatcaggtttaatgcactccccgtcgactcaaaactggcttaatactcaaagtaactcatccggcctcatagtgaagcgaacactcagaattgatataccagtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgactcctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40789" stop="46195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41088" g_stop="41224" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="223" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="369" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="489" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45801" g_stop="45895" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="584" r_length="95" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E470520" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41088" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGAT</genome_strand>
        <mrna_strand>CGTCATCGGATTCTATCGCCGCCGGTGAAGATGTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCATATCGCCGGACTACGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCATTCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCCGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCAGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTCCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337965" ref_strand="+" ref_description="SGN-E337965 [cTOE-14-G7]">
      <seq>tcggattctgtcgccgccggtgaagatgtcttccggaagatacatggcctactcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcccgtccttcctcattgctatcgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagtgttagatcaaaatgggcttgaacatgctagccccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40793" stop="44997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41093" g_stop="41224" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="218" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44697" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="294" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E337965" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>294</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41093" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCT</genome_strand>
        <mrna_strand>TCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E446308" ref_strand="+" ref_description="SGN-E446308 [cSTA-20-N7]">
      <seq>gtcgtccggaaggtacatggcctactcaccatctccatctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacaatgttggggaatgcatcagttttagatcagaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcaatcagaaatatcaggtttaatgcactccccgtcgactcaaaactggcttaatacccaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccagtggatcaatatcctagttacaatttcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40820" stop="46031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41120" g_stop="41224" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="191" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="337" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="457" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45823" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="468" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E446308" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E446308" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41120" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGT</genome_strand>
        <mrna_strand>GTCGTCCGGAAGGTACATGGCCTACTCACCATCTCCATCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACAATGTTGGGGAATGCATCAGTTTTAGATCAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAAAACTGGCTTAATACCCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCAGTGGATCAATATCCTAGT....................................................................................TACAATTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483500" ref_strand="+" ref_description="SGN-E483500 [cSTE-9-N7]">
      <seq>tcaccatctccgtctgctcctcagtctcctcatatcgccggacttcgctctgcttcctctgccatcgccgagcaagaaaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcaaaatgggcttgaacatgctagccccctggcttcaagaagaatgttttcaaatggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40845" stop="45027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41145" g_stop="41224" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="166" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44727" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="272" r_length="106" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E483500" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>272</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E483500" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41145" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGG</genome_strand>
        <mrna_strand>TCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAAGAAGAATGTTTTCAAATGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E462396" ref_strand="+" ref_description="SGN-E462396 [cPRO-11-F7]">
      <seq>cggacttcgctctgcttcctctgccatcgccgagcaagagaagtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcaaaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccttttcaatcagaaatatcaggtttaatgcactccccatcgactcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgactcctgngccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccagggtatgagcacctgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="40883" stop="47031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41183" g_stop="41224" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42621" g_stop="42706" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="128" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="274" r_length="146" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="394" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="523" r_length="129" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46731" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="566" r_length="43" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E462396" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E462396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41183" e_stop="41224"/>
          <exon e_start="42621" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAAGTGCGTTTTTCCTTTTTCTCTAACAACTTTGATTTTTTTGTTTGAAGTCTTCGTCTTTGTTGATTCAGTGGATCGTGCTGAAATTGGCTAAGCATATGTCCGATCTTCAGCTTTTTTGTTCCTTAATTTGTTGCTTTAATTTTACTATGTGGTTGTGATTTGTGACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATG</genome_strand>
        <mrna_strand>CGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCTTTTCAATCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCATCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTCCTGNGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCAGGGTATGAGCACCTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454685" ref_strand="+" ref_description="SGN-E454685 [cSTS-24-G5]">
      <seq>actttattttcattttttggtttgacgatttgtaagttgatttctctaaaatgaaagatctggtttagctgttttcttacttagtgaaaagcgtcagtttaaggttctatatactttaccgcaatttcaaacggtctggattggttctatgattccttgtatcaatttggatactttgatcaggtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcagaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcattcagaaatatcaggtttaatgcactccccgtcgactcaaaactggcttaatactcaaagtaactcatccggcctcatagtgaagcgaacactcagaattgatataccagtggatcaatatcctagttacaatttcgtgggccgactcctgngccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagagggtcaaccggggtatgagcacctgaatgagcctctacatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="41089" stop="47103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41389" g_stop="41554" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.777"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41555" i_stop="42611" i_length="1057">
            <donor d_prob="0.967" d_score="0.78"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42612" g_stop="42706" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="269" r_length="95" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="415" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="535" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="652" r_length="117" r_score="0.974"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46803" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="768" r_length="116" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E454685" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E454685" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41389" e_stop="41554"/>
          <exon e_start="42612" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
          <exon e_start="46689" e_stop="46803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCT-GAA--A-AGATCTGGTTTAGC--TT--CTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGAT-ACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGA-GGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTG</genome_strand>
        <mrna_strand>ACTTTATTTTCATTTTTTGGTTTGACGATTTGTAAGTTGATTTCTCTAAAATGAAAGATCTGGTTTAGCTGTTTTCTTACTTAGTGAAAAGCGTCAGTTTAAGGTTCTATATACTTTACCGCAATTTCAAACGGTCTGGATTGGTTCTATG-ATTCCTTGTATCAATTTGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATCAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCATTCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCCGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCAGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTCCTGNGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGGTCAACCGGGGTATGAGCACCTGAATGAGCCTCTACATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E425464" ref_strand="+" ref_description="SGN-E425464 [STM-45-I17]">
      <seq>actttattttcattttttggtttgacgatttgtaagttgatttctctaaaatgaaagatctggtttagctgttttcttacttagtgaaaagcgtcagtttaaggttctatatactttaccgcaatttcaaacggtctggattggttctatgattccttgtatcaatttggatactttgatcaggtatctctcagagttacttgcagaacgccacaaactcggcccatttgtgcctgtccttcctcactgctaccgattgctgaatcaggaacttttgcgtgtaactacactgttggggaatgcatcagttttagatcagaatgggcttgaacatgctagccccctggcttcaggaggaatgttttcaaatggaggagctaatgtggacagatgggcatcaccatttcattcagaaatatcaggtttaatgcactccccgtcgactcaaaactggcttaatactcaaagtaactcatccggcctcatagtgaagcgaacactcagaattgatataccagtggatcaatatcctagttacaatttcgtgggccgactcctgngccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccggggtatgagcacctgaatgagcctctacatgttattgtggaagctgaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="41089" stop="47062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41389" g_stop="41554" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.777"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41555" i_stop="42611" i_length="1057">
            <donor d_prob="0.967" d_score="0.78"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42612" g_stop="42706" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="269" r_length="95" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915">
            <donor d_prob="0.926" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44622" g_stop="44767" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="415" r_length="146" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45609" g_stop="45728" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="535" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="652" r_length="117" r_score="0.974"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46689" g_stop="46762" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="726" r_length="74" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E425464" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41389" e_stop="41554"/>
          <exon e_start="42612" e_stop="42706"/>
          <exon e_start="44622" e_stop="44767"/>
          <exon e_start="45609" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
          <exon e_start="46689" e_stop="46762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCT-GAA--A-AGATCTGGTTTAGC--TT--CTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGAT-ACTTTGATCAGGTTTGTTCCTCCAAAAAGTTGGTTTCTTTGATCTTATCAGAAGTTGCTTGTTACTGTTTCTTCTTCTTCGGTTCATTTTGTCAATTCTAATACTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTATTTACTTCTATCAGATGTTGATTGTTGCTGTTTCTTTTTCCTTCGGATCATTTTTTCAATTCAAATACTTTTTTTGGGTTGGTTGCGTCGAAAAGTTTGTTTCTTTGCTTCTATCGAATGTTGATTTTTGCTGTTTCTTCTTCCTTTGGATCATTTTTTTAATTCAAATACTTTTTTGGGTTGGTTGCTCTCGAAAAGTTTGTTTCTTTGCTTCTATCAGATGTTGATTGTTGCTGTTTCTTCTTCATTCGGTTCATTTTTTCAATTCAAATACTTTTTTGGGTTGGTTGCGTCGAGAAGTTTGTATCTTTGCTTCTATCAGATGTTGATTGTTATTATTTTTTCCCCTTCATTCAGAGAATTTGGTCCAATCTTCTCATAAGAAATTAAGAGAGGTGCAATTGTAAAGAAAAGATTCACTTTCTTGCTTGAATTACTCGGGCATTTATAACCCAAGAAGACTCTAGCACTTCGGCCTTGCAATAGCATTTTTTGTATGATCCCTTTTTCCCTACTTTGCTGATTGATAGAGTGGATCCGGGATTTTGAGTTGGCGGGTGTGGAGTACCACTGCACCCACTACTACTTTGTGGTGGTCGATGCAACTTTTGGTAAATGATTCAATTTGCTGCAGCCACTGACCAAATACTGCAACCCTGTCCTTCCGATTTGCATTTTGTTCCTATCTTAAGTGAACTTGTCTGCTTATTTTTGCTTATTCTAGTGCATCTTATGTGATTGACCAAATAGGAGATCTCGCTGCTCTATGTGCATTGTTTTTTCTCGATCTTCAGAAGATTGACAATAGCACAAACTAAATTAATTGGACTATCAAACTTGGAACAACCATCTTTTAAAGAGATACTGATGGTTTTCTTCTTATGTGTACCTATACCATAATTTGTTGCGAGTATTTAATTTGTCAATGTGTGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATGATTGTCTTTTTGTTATTCATGTTTAACTAGATATTTGTCCCATAAAACGGGTATTAGTATCTCTAATTTCCTCCTCCTATGCAGTTTCTAAATAAAAATAAACAATTCCTTCTTCTATGGTCAGCTGTGGTCCGCTTACCGAGTGTATAGACCTACATGTCGTAATAGGTACCAAGGGAATTACATTTTACTTAACTGGGAAGCTTGTCACAAATTTGTTTATAAATAATGTTGTAACCACCCCCTGGCAAGAAAGAGAAGAGGTATAGAGAGTCATGGTATTGAATCCATGTTTATTTCCTATATGTTGGAAATAAACACTCCATTGTCCCATTCCAGTTCAAAGATAAAAAAGAACTTCACTATCCTTTTGTTACACCCTCCCACCCCCACCCCCCAAAGTATCCTATAGGTTTTTTCTTCACATTTATAATATGCTTCACTGACAATTTAAACTGTGATACCACACATATTATTTGTGAGCCTCTAAGTTTTAGATGGAAAGTGTTATTAAAATCATCTTTTGGCCAGATTGTGGGAAATTTGCTTATAGTTTTCAATGCAAATCCCAGCTTATTTCACCATCAGCCTGTCATATATTCTTGGCTGTACCGGGAAGTTTTCAAGTACTATTTAGCAGTGTAGCCTGTAACGGATCTGGAATAGAAAGAAACACGACACTAGTAGTATACAATATTAAGATGAGGACCATGAAATTGATCCTCGAAGTATAAGAAGCATGATGTGCATTGTGTGAAGCCTGTTTAGTATGAAGGGGAAGGTTGAATCGTTGTGTGATTAGTAATAACGCTCAAGTTTGAGCGGTGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGTTTTAACCATTCATCCACAAATTGGTCATCTTAGGAGTCTCTTTTGTCCATAACATTTAACTGATTGCTTTAACAATTCATTTTTTTTCTATAAATCCGTGAGATAACTAACCAATGAAGGATCGTGTTGTTGTCCATATTGTGGTGGCTGCTAACTGATTTATTAACCACTGCTAACTGGTACGTCTTATTCTTGGAAATTGACCTTTTTGAAGCAGAACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAAGCTAACAACAACAAGGTTGATAAATAGTTTAGCTGAGCATCTGATTTAGAATTTTGCTTTTAGTTACTAGGAGCCAGCTTTCCGATGAGATCTAGATGTGTATGACACCACAAAAGCATCTCCTTCTTTGTTGATTCAAATAATTAACTCAGTAGATTGTGAGGGTCTTGTTTCACAGAATTCTGCTAACACATACGGGATGCGATCTAGATGTCCACGAGACTATTTTACGATGTGAGCTAGATGTCTATGACTCCACAGGAGCGTATCCTTACTTTCGATTCACTTATGGATGCTTTGATTCATTCTGAAACACTGGAGATTGAAAATCATAAGCTGGTTGTTTCCAAATTTATTAGAGTCATCAAGATCCTGTTATGTTTTTAAGGGTGTGCTTTCTGATTCCTCTTGTAGTATATGTCTATCTTATCTCTGTTAATGTTGCATTCGTGATTAGTAGATTATTGTCTTTATTTTGTTTCAACGTGTGTAGATCTACTGTGTGTTTTCTTATTCCTCTTGTTGTCTTGGATTTGGAATGTCTTAAATGTTCTGAATCATATGGAGGTTCAGGGTTAGTCATCTCACAAAAAGGAGGCTTCCGGGTTTATCTTTAGTGTAGTACAAAAGAGAGGGCACAAGGTGTGGATTTCTCTGTTTAACCGATTTTGTGGTTATCATATCCAGATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACT</genome_strand>
        <mrna_strand>ACTTTATTTTCATTTTTTGGTTTGACGATTTGTAAGTTGATTTCTCTAAAATGAAAGATCTGGTTTAGCTGTTTTCTTACTTAGTGAAAAGCGTCAGTTTAAGGTTCTATATACTTTACCGCAATTTCAAACGGTCTGGATTGGTTCTATG-ATTCCTTGTATCAATTTGGATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATCAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCTGTCCTTCCTCACTGCTACCGATTGCTGAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTTTTAGATCAGAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCATTCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCAGGTTTAATGCACTCCCCGTCGACTCAAAACTGGCTTAATACTCAAAGTAACTCATCCGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCAGTGGATCAATATCCTAGT....................................................................................TACAATTTCGTGGGCCGACTCCTGNGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGGTATGAGCACCTGAATGAGCCTCTACATGTTATTGTGGAAGCTGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549105" ref_strand="+" ref_description="SGN-E549105 [TUS-67-F14]">
      <seq>tggacctgcactctgggaatatctatatcatagtaagaggttatactgggcatgttatattcctcttgtaaatgtgtttggcaatggtggattgcatggccaaggacatgttagacctataaggaaattcttttcttttcatatatcttctaaatatatcttggaaatggcggaggatatgtccaaagacaagtttaaccttcaagcagtaattttttttttaattatgaccaacaacctaggagagtcctaacatttatgagattttttttactgttgtctgcctaaattcttctctccttcaattaggttagaccttctcctccttcctccgtttggttgtcatcttcgggacttcttttaataaaacggtgttgctcctagttgctgtctagcatcacaccaaaccacttaaatggcagggtttcttatttgttatagaaaatattgtatataccttgatattgaagtttggcatcttcaactgcaaaaaaaggtgccttaaagtgacagaattaatgcccctctaattgtaccgttgcgtcgtagattttctgccctatgcttcccatctctactgttccccgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="43515" stop="44704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43815" g_stop="44404" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E549105" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43815" e_stop="44404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGT</genome_strand>
        <mrna_strand>TGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307865" ref_strand="+" ref_description="SGN-E307865 [cLEY-20-P24]">
      <seq>ggacctgcactctgggaatatctatatcatagtaagaggttatactgggcatgttatattcctcttgtaaatgtgtttggcaatggtggattgcatggccaaggacatgttagacctataaggaaattcttttcttttcatatatcttctaaatatatcttggaaatggcggaggatatgtccaaagacaagtttaaccttcaagcagtaattttttttttaattatgaccaacaacctaggagagtcctaacatttatgagattttttttactgttgtctgcctaaattcttctctccttcaattaggttagaccttctcctccttcctccgtttggttgtcatcttcgggacttcttttaataaaacggtgttgctcctagttgctgtcttgcatcacaccaaaccacttaaatggcagggtttcttatttgttatagaaaatattgtatataccttgatattgaagtttgccatcttcaactgcaaaaaaaggtgcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="43516" stop="44617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43816" g_stop="44317" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E307865" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43816" e_stop="44317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTT</genome_strand>
        <mrna_strand>GGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTTGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGCCATCTTCAACTGCAAAAAAAGGTGCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359448" ref_strand="+" ref_description="SGN-E359448 [cLHT-31-M8]">
      <seq>cactccccgtcgactcaaaattggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgacttctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccgggatatgagcacctgaatgagcctcttcatgttattgtggaagctgagctgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctgctcaagcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgaacttgcaatgctcaatggtactcttcgtgaagaaggttctcaaatgtctggttctgtttcccccttccacaacagtcttagtcttgggatgaagagggctaaaaccagagtgtgatctttgtctagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaaccgatgttgctataacgtcttatgcctcgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="45324" stop="47503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45624" g_stop="45728" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="234" r_length="129" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="378" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46944" g_stop="47203" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="638" r_length="260" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E359448" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45624" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCAC</genome_strand>
        <mrna_strand>CACTCCCCGTCGACTCAAAATTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAGCTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTCAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTCTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E461341" ref_strand="+" ref_description="SGN-E461341 [cPRO-8-G19]">
      <seq>ctcaaaactggcttaatactcaaagtaactcatcaggcctcatagtgaagcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgactcctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccagggtatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctactcaggcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgagcttgcaatgctcaatggtactcttcgtgaagaagattctcaaatgtctggttctgtttcccccttccacaacagtcttgggatgaagagggctaaaaccagagtgtgatctttgtctagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaacagatgttgctataacgtcagatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="45337" stop="47564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45637" g_stop="45728" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="221" r_length="129" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="365" r_length="144" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46944" g_stop="47264" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="680" r_length="315" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E461341" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45637" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAA</genome_strand>
        <mrna_strand>CTCAAAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTCCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCAGGGTATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTACTCAGGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAGCTTGCAATGCTCAATGGTACTCTTCGTGAAGAAGATTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCAC-A-A--C--AGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTCTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACAGATGTTGCTATAACGTCAGATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728398" ref_strand="+" ref_description="SGN-E728398 [LA17CG08]">
      <seq>gcgatgcgaacactcagaattgatataccggtggatcaatatcctagtttacctttgcagtacaatttcgtgggccgacttctgggccctagagggaactctctaaagcgggtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccgggatatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctgctcaagcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgaacttgcaatgctgaatggtactcttcgtgaagaaggttctcaaatgtctggttctgtttcccccttccacaacagtcttagtcttgggatgaagagggctaaaaccagagtgtgatctttgtgtagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaaccgatgttgctataacgtcttatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaagtgtgtttatgttccggtcanggaagatttagtaacagtaaagccatagttgtggaccgcttanaggtttgcttgatgtcgtcagagcggtgtctttacaacgtcattgtattattccattaatttctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="45381" stop="47694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45681" g_stop="45728" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45801" g_stop="45929" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="177" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="321" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46944" g_stop="47394" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="772" r_length="451" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E728398" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45681" e_stop="45728"/>
          <exon e_start="45801" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAG</genome_strand>
        <mrna_strand>GCGATGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT........................................................................TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCANGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTANAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTTACAACGTCATTGTATTATTCCATTAATTTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464447" ref_strand="+" ref_description="SGN-E464447 [cPRO-18-C21]">
      <seq>cctagttacaatttcgtgggccgactcctgggccctagagggaactctctaaagcgagtggaagctactactgaatgccgggttctgataagaggacgcggaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccagggtatgagcacctgaatgagcctcttcatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctactcaggcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgagcttgcaatgctcaatggtactcttcgtgaagaagattctcaaatgtctggttctgtttcccccttccacaacagtcttgggatgaagagggctaaaaccagagtgtgatctttgtctagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaacagatgttgctataacgtcagatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaagtgtgtttatgttccggtcagggaagatttagtaacagtaagccatagttgtggaccgcttagaggtttgcttgatgtcgccagagcgctgtcttaccaatcattgtattatttcattattttctagtttgtgatttgaacgtgtgggaatgcctngtatgctagcgaggctgtctgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="45511" stop="47749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45723" g_stop="45728" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84">
            <donor d_prob="0.977" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45813" g_stop="45929" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="123" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="267" r_length="144" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46944" g_stop="47449" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="763" r_length="496" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E464447" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45723" e_stop="45728"/>
          <exon e_start="45813" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAGTGTATGTACTATTATCTATTTTCTCATTCTGCTTATCATGACTTCTCTACATCATGTTGAATGTGTGTTTTAGTTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACT</genome_strand>
        <mrna_strand>CCTAGT....................................................................................TACAATTTCGTGGGCCGACTCCTGGGCCCTAGAGGGAACTCTCTAAAGCGAGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCAGGGTATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTACTCAGGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAGCTTGCAATGCTCAATGGTACTCTTCGTGAAGAAGATTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCAC-A-A--C--AGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTCTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACAGATGTTGCTATAACGTCAGATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGT-AAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGCCAGAGCGCTGTCTTACCAA--TCATTGTATTATTTCATTATTTTCTAGTTTGTGATTTGAACGTGTGGGAATGCCTNGTATGCTAGCGAGGC-TGTCTGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412389" ref_strand="-" ref_description="SGN-E412389 [STM-16-O11]">
      <seq>gaagcatcaaagatccagtaaaggaagaaatgatgagaggcaaaccggggtatgagcacctgaatgagcctctacatgttattgtggaagctgaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctgctcaggcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgaacttgcaatgctcaatggtactcttcgtgaagaaggttctcaaatgtctggttctgtttcccccttccacaacagtcttgggatgaagagggctaaaaccagagtgtgatctttgtctagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaacagatgttgctataacgtcagatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaagtgtgtttatgttccggtcagggaagatttagtaaacagtaagccatagttgtggaccgcttagaggtttgcttgatgtcgccagagcgctgtcttaccaatcattgtattattccattattttctagtttgtgatttgaaggtgtgggaatgcctgtaatgctagcganggcgtgtctgtactgataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="45607" stop="47762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45907" g_stop="45929" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="167" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46944" g_stop="47461" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="678" r_length="511" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E412389" ref_strand="-">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412389" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="45907" e_stop="45929"/>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCATCAAAGATCCAGTAAAGGTAATATTATGAACTGATGGAATATTTGAGTGGCCATGGAATAATCTCTATTCCAGTCCATTTTGAAGTTCTTATTAAATTTAGATTAGTTACCCTTTTCTGGCTTGTTTAGTTGATTCATCTGTGATATTAAGGTGGGCCCTTACCTCCATAGGTTGGTACGAAGTTGATGTATCAAAAGTTCTTTTGGTGGAGGTCAAGTTTTGATTCCGTCATTAGAATTTTCAGCAACTCTTGTTAGTGGCATTGGATAGTCTGATGTCCCAGTCAAATTTTACATCCGGATAGGCGTGAGAGATTCTAGAGTTAAGGAGGGGCTTGCGGATAATTTTATAACACCTTTAGATATTTCAAGAAAGCTTTAGAATATCCTAGATTATCTAGATTTTTCTAGAGAGGGAACAAAGTGTAAATATTTTAGGGACTTGTAAAGTAATTTTAAATTGCACTTAGCCCCTTAGTAGTATAAACAGAGGTGTCATTCATTTGCAATGCATCCCTCCTCAAGTGTAAAGCAGTCTTCCAAGCTAATACAAAGCCATCCTCAAAACTTCCCAAATCTTTCGAAGTCTTTCTTTGCATCGCTAAAGGCTTACTTGAGCTTACGAGATCTTGAAACAATAGTAAGTTGTCAAGGGTTGCACGGAGGTGTAGTGAAAACTCCAAGTCCGTGACGCCGAGGTGGTAATTGTACAATTTTTCCATCCGGAATCATCTTTCTTAACATTTAACATAATATTTTACTTCGTCATTTTGAAGGAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGT-AACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGA-GGCGTGTCTGTACTGATAAAAAAAGA</genome_strand>
        <mrna_strand>GAAGCATCAAAGATCCAGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATGATGAGAGGCAAACCGGGGTATGAGCACCTGAATGAGCCTCTACATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAGGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTCAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCAC-A-A--C--AGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTCTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACAGATGTTGCTATAACGTCAGATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAAACAGT-AAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGCCAGAGCGCTGTCTTACCAA--TCATTGTATTATTCCATTATTTTCTAGTTTGTGATTTGAAGGTGTGGGAATGCCTGTAATGCTAGCGANGGCGTGTCTGTACTGATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574420" ref_strand="-" ref_description="SGN-E574420 [33885]">
      <seq>gataagagacgccggaagcatcaagatccagtaaaaggaagaaatggatggagaggcaaaccagggtatgagcacctgaatgagcctctttcatgttattgtggaagctgaaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggaagatctactcaggcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgagcttgcaatgctcaatggtactcttcgtgaagaagattctcaaatgtctggttctgtttcccccttccacaacagtcttgggatgaagagggctaaaaccagagtgtgatctttgtctagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaacagatgttgctataacgtcagatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaagtgtgtttatgttccggtcagggaagatttagtaacagtaagccatagttgtggaccgcttagaggtttgcttgatgtcgccagagcgctgtcttaccaatcattgtattattccattattttctagtttgtgatttgcaacgtgtgggaatgcctgtaatcggctagcgaggctgtctgtactgataaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="46386" stop="47753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46689" g_stop="46832" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="185" r_length="148" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46944" g_stop="47460" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="695" r_length="510" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E574420" ref_strand="-">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574420" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46689" e_stop="46832"/>
          <exon e_start="46944" e_stop="47460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAATG-ATG-AGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTC-TTCATGTTATTGTGGAAGCTGA-ACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTG-AAGGTGTGGGAATGACTGTAAT--GCGAGCGAGGCGTGTCTGTACTGATAAAAAAAG</genome_strand>
        <mrna_strand>GAAGAAATGGATGGAGAGGCAAACCAGGGTATGAGCACCTGAATGAGCCTCTTTCATGTTATTGTGGAAGCTGAAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTACTCAGGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAGCTTGCAATGCTCAATGGTACTCTTCGTGAAGAAGATTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCAC-A-A--C--AGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTCTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACAGATGTTGCTATAACGTCAGATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGT-AAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGCCAGAGCGCTGTCTTACCAA--TCATTGTATTATTCCATTATTTTCTAGTTTGTGATTTGCAACGTGTGGGAATGCCTGTAATCGGCTAGCGAGGC-TGTCTGTACTGATAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544818" ref_strand="+" ref_description="SGN-E544818 [TUS-67-F14](-)">
      <seq>gaactgccagtggagatcattgatgcccggctattgcaagcacgtgagatattggtagatctgctcaagcctatggatgagtcacaggatttctacaaaaaacagtagttgcgtgaacttgcaatgctgaatggtactctgtgtgaagaaggttctcaaatgtctgtttctgtttcccccttccacaacagtcttagtcttgggatgaagagggctaaaaccagagtgtgatctttgtgtagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaaccgatgttgctataacgtcttatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctatattgatatgaagtgtgtttatgttccggtcagggaagatttagtaacagtaaagccatagttgtggaccgcttagaggtttgcttgatgtcgtcagagcggtgtcttaccaacgtcattgtattattccagtaatttctagtttgtgatttgaaggtgtgggaatgactgtaatgcgagcgatggcgtgtctgtactgataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="46458" stop="47771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46758" g_stop="46832" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46944" g_stop="47469" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="602" r_length="527" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E544818" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46758" e_stop="46832"/>
          <exon e_start="46944" e_stop="47469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGA-GGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</genome_strand>
        <mrna_strand>GAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGTAGATCTGCTCAAGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGTAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTGTGTGAAGAAGGTTCTCAAATGTCTGTTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATATTGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCAGTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGATGGCGTGTCTGTACTGATAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573779" ref_strand="-" ref_description="SGN-E573779 [33143]">
      <seq>ctctacatgtttatttgtgggaagctgaacttgcccagttggagatacattgatgcccgggctattgcaagcacgtgagatattggaagatctgctcaggcctatggatgagtcacaggatttctacaaaaaacagcagttgcgtgaacttgcaatgctcaatggtactcttcgtgaagaaggttctcaaatgtctggttctgtttcccccttccacaacagtcttgggatgaagagggctaaaaccagagtgtgatctttgtctagtgggatttggagcttgtgcattgatacacaccactaaccaaccagcaggtcctatatgcaacagatgttgctataacgtcagatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaagtgtgtttatgttccggtcagggaagatttagtaaacagtaagccatagttgtggaccgcttagaggtttgcttgatgtcgccagagcgctgtcttaccaatcattgtattattccattattttctagtttgtgatttgaaggtgtggggaatgcctgaaatgctagcgaggcgtgtcttgtactgataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="46435" stop="47756"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46768" g_stop="46832" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="106" r_length="67" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46944" g_stop="47456" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="613" r_length="507" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E573779" ref_strand="-">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573779" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46768" e_stop="46832"/>
          <exon e_start="46944" e_stop="47456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGAT-CATTGATGCCC-GGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATGGTAAATTCAACATATAGATTGCAAGTTGTCATTGTTTGTCTACTAACTATCACACATTTTCCCAAGTTGAGAGATATTCATTATTATTTCTTCATTTTCCTCCAAATGCAGGATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGT-AACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGT-GGGAATGACTGTAATGCGAGCGAGGCGTGTC-TGTACTGATAAAA</genome_strand>
        <mrna_strand>TGGAGATACATTGATGCCCGGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAGGCCTATG...............................................................................................................GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTCAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCAC-A-A--C--AGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTCTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACAGATGTTGCTATAACGTCAGATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAAACAGT-AAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGCCAGAGCGCTGTCTTACCAA--TCATTGTATTATTCCATTATTTTCTAGTTTGTGATTTGAAGGTGTGGGGAATGCCTGAAATGCTAGCGAGGCGTGTCTTGTACTGATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E424299" ref_strand="+" ref_description="SGN-E424299 [STM-43-I14]">
      <seq>ttacaggcattcccacaccttcaaatcacaaactagaaaataatggaattttacaatgattggtaagacagcgctctggcgacatcaagcaaacctctaagcggtccacaactatggcttactgtttactaaatcttccctgaccggaacataaacacacttcatatcattatagagacaagttagaactggcacagaacagcaccagtgccccgatggcagtgcgaggcatctgacgttatagcaacatctgttgcatataggacctgctggttggttagtggtgtgtatcaatgcacaagctccaaatcccactagacaaagatcacactctggttttagccctcttcatcccaagactgttgtggaagggggaaacagaaccagacatttgagaaccttcttcacgaagagtaccattgagcattgcaagttcacgcaactgctgttttttgtagaaatcctgtgactcatccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47726" stop="46643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47426" g_stop="46941" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E424299" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E424299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47426" e_stop="46941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGTCATTCCCACACCTTCAAATCACAAACTAGAAATTAATGGAATAATACAATGACGTTGGTAAGACACCGCTCTGACGACATCAAGCAAACCTCTAAGCGGTCCACAACTATGGCTTTACTG-TTACTAAATCTTCCCTGACCGGAACATAAACACACTTCATATCATTATAGAGACAAGTTAGAACTGGCACAGAACAGCACCAGTGCCCCGATGGCAGTGCGAGGCATAAGACGTTATAGCAACATCGGTTGCATATAGGACCTGCTGGTTGGTTAGTGGTGTGTATCAATGCACAAGCTCCAAATCCCACTACACAAAGATCACACTCTGGTTTTAGCCCTCTTCATCCCAAGACTAAGACTGTTGTGGAAGGGGGAAACAGAACCAGACATTTGAGAACCTTCTTCACGAAGAGTACCATTCAGCATTGCAAGTTCACGCAACTGCTGTTTTTTGTAGAAATCCTGTGACTCATCCTG</genome_strand>
        <mrna_strand>TTACAGGCATTCCCACACCTTCAAATCACAAACTAGAAAATAATGGAATTTTACAATGA--TTGGTAAGACAGCGCTCTGGCGACATCAAGCAAACCTCTAAGCGGTCCACAACTATGGC-TTACTGTTTACTAAATCTTCCCTGACCGGAACATAAACACACTTCATATCATTATAGAGACAAGTTAGAACTGGCACAGAACAGCACCAGTGCCCCGATGGCAGTGCGAGGCATCTGACGTTATAGCAACATCTGTTGCATATAGGACCTGCTGGTTGGTTAGTGGTGTGTATCAATGCACAAGCTCCAAATCCCACTAGACAAAGATCACACTCTGGTTTTAGCCCTCTTCAT-CC----C-AAGACTGTTGTGGAAGGGGGAAACAGAACCAGACATTTGAGAACCTTCTTCACGAAGAGTACCATTGAGCATTGCAAGTTCACGCAACTGCTGTTTTTTGTAGAAATCCTGTGACTCATCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E225221" ref_strand="+" ref_description="SGN-E225221 [cLEL-17-P18](-)">
      <seq>tgtgatctttgtgtagtgggatttggagcttgtgcattgatacacacccactaacaaccagcaggtcctatatgcaaccgatgttgctataacgtcttatgcctcgcactgccatcggggcactggtgctgttctgtgccagttctaacttgtctctataatgatatgaagtgtgtttatgttccggtcagggaagatttagtaacagtaaagccatagttgtggaccgcttagaggtttgcttgatgtcgtcagagcggtgtcttaccaacgtcattgtattattccattaatttctagtttgtgatttgaaggtgtgggaatgactgtaatgcgagcgaggcgtgtctgtactgataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="46795" stop="47771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47095" g_stop="47469" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E225221" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47095" e_stop="47469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACA-CCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</genome_strand>
        <mrna_strand>TGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCCACTAA-CAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586542" ref_strand="+" ref_description="SGN-E586542 [60599]">
      <seq>ctcgctagcattacaggcattcccacacgttcaaatcacaaactagaaaataatggaataatacaatgattggtaagacagcgctctggcgacatcaagcaaacctctaagcggtccacaactatggcttactgttactaaatcttccctgaccggaacataaacacacttcatatcattatagagacaagttagaactggcacagaacagcaccagtgccccgatggcagtgcgaggcatctgacgttatagcaacatctgttgcatataggacctgctggttggttagtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47736" stop="46841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47436" g_stop="47141" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E586542" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47436" e_stop="47141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGCTCGCATTACAGTCATTCCCACACCTTCAAATCACAAACTAGAAATTAATGGAATAATACAATGACGTTGGTAAGACACCGCTCTGACGACATCAAGCAAACCTCTAAGCGGTCCACAACTATGGCTTTACTGTTACTAAATCTTCCCTGACCGGAACATAAACACACTTCATATCATTATAGAGACAAGTTAGAACTGGCACAGAACAGCACCAGTGCCCCGATGGCAGTGCGAGGCATAAGACGTTATAGCAACATCGGTTGCATATAGGACCTGCTGGTTGGTTAGTGG</genome_strand>
        <mrna_strand>CTCGCTAGCATTACAGGCATTCCCACACGTTCAAATCACAAACTAGAAAATAATGGAATAATACAATGA--TTGGTAAGACAGCGCTCTGGCGACATCAAGCAAACCTCTAAGCGGTCCACAACTATGGC-TTACTGTTACTAAATCTTCCCTGACCGGAACATAAACACACTTCATATCATTATAGAGACAAGTTAGAACTGGCACAGAACAGCACCAGTGCCCCGATGGCAGTGCGAGGCATCTGACGTTATAGCAACATCTGTTGCATATAGGACCTGCTGGTTGGTTAGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E225876" ref_strand="+" ref_description="SGN-E225876 [cLEL-17-N2](-)">
      <seq>ggcactggtgctgttctgtgccagttctaccttgtctctataatgatatgaagtgtgtttatgttccggtcagggaagatttagtagcagtgaagccatagttgtggaccgcttagaggtttgcttgatgtcgtcagagcggtgtcttaccagcgtcattgtattattccattgatttctagtttgtgatttgaaggtgtgggaatgactgtaatgcgaccgaggcgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="46913" stop="47741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47213" g_stop="47441" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E225876" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>229</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47213" e_stop="47441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTG</genome_strand>
        <mrna_strand>GGCACTGGTGCTGTTCTGTGCCAGTTCTACCTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAGCAGTGAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAGCGTCATTGTATTATTCCATTGATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGACCGAGGCGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725374" ref_strand="+" ref_description="SGN-E725374 [FC26DF04]">
      <seq>agtttgcagcctcccctaaaactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatggcttcaaagaggattcaaaaggaattgaaggacttgcagaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagaccgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacacatctgtttctactttcatgaatatcatcgaacctttattctatagtagtaaataaacttaggcatggtgcacaatttatagatattggtgtttcttgttttctggtatattgccttttaagtttttgactggttaacgatttatcatttggtgaaacttaagatatgtttttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47916" stop="51641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48216" g_stop="48260" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.93"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="136" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="264" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="369" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51341" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="692" r_length="323" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E725374" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48216" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGCAGCCTCCATCAAAAACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTT</genome_strand>
        <mrna_strand>AGTTTGCAGCCTCC-CCTAAAACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAAAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E724570" ref_strand="+" ref_description="SGN-E724570 [FC24CA10]">
      <seq>aatcggccgaattagtttgcagcctcccctaaaactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagaccgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacacatctgtttctactttcatgaatatcatcgaacctttattctatagtagtaaataaacttaggcatggtgcacaatttatagatattggtgtttcttgttttctggtatattgccttttaagtttttgactggttaacgatttatcatttggtgaaacttaagatatgtttttgttgacnannaanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47914" stop="108174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48218" g_stop="48260" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="57" r_length="42" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.93"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="149" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="277" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="382" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51346" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="710" r_length="328" r_score="0.994"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51347" i_stop="52405" i_length="1059">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="52406" g_stop="52452" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="711" r_stop="757" r_length="47" r_score="0.617"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E724570" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48218" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51346"/>
          <exon e_start="52406" e_stop="52452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCAGCCTCCATCAAAAACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACATGTGAAGTCTTCTCTTTTTTCGCTCGTCGCTATTTTTTTAAAAAATAACTTCAAGAGTTCCATGTGTAGAACTTGAGACTTGAGGATAGTGGTTAATTTTCAATTATAAGGATCGAACAAATGACTATTTGTTCATAGTTGGTTAACCTTATTCTAAGGTAAAGTTGTTGGCTGTGTGGCTAATGGACCAAATTTGGTCAATATAGTTTGTTAGTTTTTGCTTTTTAAGCAGAAAAAAGAGAGGTAACTTTATTCAGCTAACACATGGTAAGGTGGAAAAGTTAGCATGTAAAACAAGAGTAAGAACAAAGATGGTTAAATTATATTATTACAGAAGAAGAAAGGGATTTCACAAGATCCTATGAATAGGACCATAAAATGAAATGTCACCTTCATCTTTCAAATTTTTTATTCTTATATACTTAGAATGGAGAAAGAATTCAAAAATCTTTTAACTTGTTTCTCTGGTTAACACAAAGCAAAAGGAATATGTACATATTGTAGTTAGATGTATACAAAAATGTGAAGTGGTCCTCTCCATCTCTACTCTACTGTATCAGAGTGTTGTCACATTTTTAAGTTTAGCCAGCTTTATATGAGAAACAAACTAACAATATTACAAATATGTAGCCACAAAATTGGTATATAGGAGTGTATGAGACAAAAACAAGTCTCTATTGGAGTAAAACCATTTTATTTATTTATTTCAAATTCATCTCATACATTTGCTCTTGAAATCACCTTCTTGGTGAGGGTACGATTTGTCACCTTGTAATTCCCTTCCCGTTTTCCCTTTTCCTAGAAAAAACCTTTGTATATTTGATTTTTTTCAAAGATTTCTTGTCATGTTTGTCTTACTTCTTTGTATTGAGTCGACGTTCTAGTGGAAACATTATTTCCATCTCATAAAGATAGATGTAAGATATACTTGTATTATACTTTTGGAAATACTATTTTACTTTTCAAACAATTAAAGTCTGAGTTCATATCTTAGATATAAAAGTTCTAAAACCACTTATGTTGCATTTTTTATCATTTGAATTCAAATTAGTTAGATCAGCGCATCAAATAATTAAATAAAAAAGAATCAACCTAAAAACGAAAATA</genome_strand>
        <mrna_strand>TTTGCAGCCTCC-CCTAAAACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACNA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NNAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E555649" ref_strand="+" ref_description="SGN-E555649 [cTSC-6-M6]">
      <seq>cctccatcaaaaactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagaccgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacacatctgtttctactttcatgaatatcatcgaacctttattctatagtagtaaataaacttaggcatggtgcacaatttatagatattggtgtttcttgttttctggtatattgccttttaagtttttgactggttaacgatttatcatttggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47925" stop="51620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48225" g_stop="48260" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="128" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="256" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="361" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51320" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="663" r_length="302" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E555649" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555649" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48225" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCATCAAAAACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGA</genome_strand>
        <mrna_strand>CCTCCATCAAAAACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551457" ref_strand="+" ref_description="SGN-E551457 [TUS-54-K16]">
      <seq>aaactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccnaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagaccgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacacatctgtttctactttcatgaatatcatcgaacctttattctatagtagtaaataaacttaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47935" stop="51529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48235" g_stop="48260" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="118" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="246" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="351" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51229" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="562" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E551457" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48235" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGC</genome_strand>
        <mrna_strand>AAACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCNAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688745" ref_strand="+" ref_description="SGN-E688745 [t3_tus_54_K16]">
      <seq>aaactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccnaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagaccgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacacatctgtttctactttcatgaatatcatcgaacctttattctatagtagtaaataaacttaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47935" stop="51529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48235" g_stop="48260" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="118" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="246" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="351" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51229" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="562" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E688745" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48235" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGC</genome_strand>
        <mrna_strand>AAACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCNAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256822" ref_strand="+" ref_description="SGN-E256822 [cLEG-40-B1]">
      <seq>aactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatngctggaaagatgattcanaatgaattgaaggacttgcagaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagaccgaagtatgagagtactgccagatcatggacccagaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47936" stop="51449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48236" g_stop="48260" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="117" r_length="92" r_score="0.935"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="245" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="350" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51149" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="481" r_length="131" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E256822" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48236" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51149"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATA</genome_strand>
        <mrna_strand>AACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATNGCTGGAAAGATGATTCANAATGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256792" ref_strand="+" ref_description="SGN-E256792 [cLEG-40-C22]">
      <seq>aactctcttctctcgaaagaaaaagtgataagtctcgcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcaaaaagacccccctgcttcctgcagtgcaggccctgtaggtcaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgcatctatccatttccctccagattatcctttcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="47936" stop="51221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48236" g_stop="48260" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="117" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="245" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50921" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="343" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E256792" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48236" e_stop="48260"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTCTTCTCTCGAAAGAAAAAGGTTCGTAACCCTTAAAGAATTTTTTAACCCTACCGATTTCTCTGTCTTTTTTTTTTTTTTGCAAAATTGATCATGTTTGTTTGTTATGTTTTTGTTTATCTTTTTGCTGTAATTTTTCTGGATTTATATGGTGGTTTGCCGATTTTTTGTTTTCATTGTGAAAGAAGTAGTGGATGTACTCTGTTTCTGTTTTAATGTAGGCGTGATGAGAAGAGAATTTATAAAGCTGATTCTGTTTAGTTTTGTATAGATACTAGTAGTACTAGTAAGTTGATTGTTTATTTTGAGGAACTGCTGTGATGAATCATTTTTTAATTAAAAAAAGGTTCATTTTTTAAGGTTTCACTTTCTTTAACATCAAAACAGGAAAAGGGGACTTTTTTGTTTGTTTGTGGAGTCCTGGAAAAAATTGGATTCTTGTTTTGGGTTGGTATGCGTTACTGCAGGGGCGGAGTTAGGTAGGGTTAAGGCGAACCCACCGTTTCGTTTATGTAGGAGTTTTTACGTATATATATATATATAGTGGATATTGAATTCCGTCACTTCTTTTGTGTATTTGTTTTTTCCTGTTTTTGTACTTAAGGTTGGTGAGATCCTAGGCGAATGTTTCTTGATCATTATCTGTGTGATAAAAGCTGGGATGTAATGGTTGTCCCTGTTGTTGGTGTTAATGGTTATATTAATTTATTTGGTTTCCTGTTCCAAGTTAAAATTCTGATCATTATCTCTTAGATAGAGACTAGGATGTGATGGTTTCTGCGGGTTATTAATGTTTTTGTATATTTTGAGGCCATTGATTATGGTAAAAAACCTTTCTTTAGGAAGGGGGAGAGTGTTTTACATTGTCTGGAACTTCATTGTCTTTTCTCTTGCCTGAGTTTCACCAATGTAGTGTAATAGTTCTTGCCTGCTCCTCTGCACTTACAGGAGCAGCACCGGAGAGGAAAATACATATTCTCTTTAGTAGTATATGTAGTTTCAACTCCTACGCATTGCTGCAGTTCGCTTCTCCTTAATGCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGT</genome_strand>
        <mrna_strand>AACTCTCTTCTCTCGAAAGAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAAAAAGACCCCCCTGCTTCCTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450810" ref_strand="+" ref_description="SGN-E450810 [cSTS-10-D23]">
      <seq>aaaactcttttctctcaaaaaaagtgataagtctctcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcttgcagtgcaggtcctgttggtgaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgtgtctatccatttccccccagattatccattcaagcccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttccatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagagcgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacacatttagttctactctaatgaatatcatcggacctttatgctatagtagtaaataaacataggcatggtgcacaatttaaagatattggtgtttcttgttttctggtattttgccctttagttttttgactcgttaacgatttatcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="49126" stop="51616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49278" g_stop="49301" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49302" i_stop="49427" i_length="126">
            <donor d_prob="0.789" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="116" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="244" r_length="128" r_score="0.945"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="349" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51316" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="647" r_length="298" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E450810" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E450810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49278" e_stop="49301"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTG</genome_strand>
        <mrna_strand>AAAACTCTTTTCTCTCAAAAAAAG..............................................................................................................................TGATAAGTCTCTCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCTTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGTTGGTGAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGTGTCTATCCATTTCCCCCCAGATTATCCATTCAAGCCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCCATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGAGCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATTTAGTTCTACTCTAATGAATATCATCGGACCTTTATGCTATAGTAGTAAATAAACATAGGCATGGTGCACAATTTAAAGATATTGGTGTTTCTTGTTTTCTGGTATTTTGCCCTTTAGTTTTTTGACTCGTTAACGATTTATCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E429818" ref_strand="-" ref_description="SGN-E429818 [STM-52-N23]">
      <seq>caaaactttttctgtcaaaaaaagtgataagtctctcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcttgcagtgcaggtcctgttggtgaggatatgttccattggcaagctaccataatgggtccatttgacagtccgttttttgggggggttttccttgtgtttatccatttccccccagattatccattcaaacccccaaaggtttttttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgcttttactgtatccaaggtgctgctttccatttgctttttgcttgctgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagagcgaagtatgagagttttgccagatcatggacccagaaattcgcaatgggttgaacgcatttggttttactttcatgaatatcattggacctttatgctatagtagtaaataaacaaaggcatggtgcccaatttttaagataatggggttttttgttttttggtaattttccccttagtttttgactcgttaacgatttatcatttggtgaaattcagatatgtttttgttgcccttggaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="49126" stop="108163"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49279" g_stop="49303" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.760"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49304" i_stop="49427" i_length="124">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="116" r_length="91" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="244" r_length="128" r_score="0.906"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="349" r_length="105" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.926" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51351" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="681" r_length="332" r_score="0.889"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51352" i_stop="53378" i_length="2027">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.208" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53379" g_stop="53403" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="706" r_length="25" r_score="0.720"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E429818" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429818" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="49279" e_stop="49303"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51351"/>
          <exon e_start="53379" e_stop="53403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTAT-AGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACATGTGAAGTCTTCTCTTTTTTCGCTCGTCGCTATTTTTTTAAAAAATAACTTCAAGAGTTCCATGTGTAGAACTTGAGACTTGAGGATAGTGGTTAATTTTCAATTATAAGGATCGAACAAATGACTATTTGTTCATAGTTGGTTAACCTTATTCTAAGGTAAAGTTGTTGGCTGTGTGGCTAATGGACCAAATTTGGTCAATATAGTTTGTTAGTTTTTGCTTTTTAAGCAGAAAAAAGAGAGGTAACTTTATTCAGCTAACACATGGTAAGGTGGAAAAGTTAGCATGTAAAACAAGAGTAAGAACAAAGATGGTTAAATTATATTATTACAGAAGAAGAAAGGGATTTCACAAGATCCTATGAATAGGACCATAAAATGAAATGTCACCTTCATCTTTCAAATTTTTTATTCTTATATACTTAGAATGGAGAAAGAATTCAAAAATCTTTTAACTTGTTTCTCTGGTTAACACAAAGCAAAAGGAATATGTACATATTGTAGTTAGATGTATACAAAAATGTGAAGTGGTCCTCTCCATCTCTACTCTACTGTATCAGAGTGTTGTCACATTTTTAAGTTTAGCCAGCTTTATATGAGAAACAAACTAACAATATTACAAATATGTAGCCACAAAATTGGTATATAGGAGTGTATGAGACAAAAACAAGTCTCTATTGGAGTAAAACCATTTTATTTATTTATTTCAAATTCATCTCATACATTTGCTCTTGAAATCACCTTCTTGGTGAGGGTACGATTTGTCACCTTGTAATTCCCTTCCCGTTTTCCCTTTTCCTAGAAAAAACCTTTGTATATTTGATTTTTTTCAAAGATTTCTTGTCATGTTTGTCTTACTTCTTTGTATTGAGTCGACGTTCTAGTGGAAACATTATTTCCATCTCATAAAGATAGATGTAAGATATACTTGTATTATACTTTTGGAAATACTATTTTACTTTTCAAACAATTAAAGTCTGAGTTCATATCTTAGATATAAAAGTTCTAAAACCACTTATGTTGCATTTTTTATCATTTGAATTCAAATTAGTTAGATCAGCGCATCAAATAATTAAATAAAAAAGAATCAACCTAAAAACGAAAATAGTTACTAATTCATGATTCTATCATCTTCTTTTAAAAAAAGAGACATGAAAGACACGCGTTTCCACCTTGTCGATTATGATATATATAGTACTTGCATTTGAATTGTAATATTACACGAAACCAAAGTTAAGTGATAGAATATTGGTGAAAGGTCAAATTAATTAGTACAAAAATCTTCCATATAACTTGTTGTAAACCTTGTAGAAAATCATTATATTTTGGTGATAAAAAGATTTAGAAAAGTGACTTTGGGCGTAAAAGTAGAGAGAACATTATCAAAAATAGTCACAAAGAAACAAGACATGTGATGGGTGGTCAGATGTAGGATGGAGTGGCATGTTGGCTGCCCCATTTGAAAAGCTACACAAATGCCCCTTTAAAATATATAATTATAATTTTATTCAAATCAAACTCGATTATTCTATCATCGTTACTTTATACTTATACTGAACAACTGTGATTTCTTCAAAACTTTAACTAAATATCTTGGTTAACACCAAAATAAGTTCATCAATGTCCAACCAAACCCCCATACATCAAAACCCAAAAAAAGAAATGATAAAGATATGATCACAACAAAGTCAATGAATATAGAATTTTTTTTCGAATAAAGTTTACCAAGGTACCTTTTAATTAATATTATGTCAGAAGATAAAAACTATATGTTAAAAGAATTGCATATATTATAATAGTGACACTACATTAATTAAATTATTTCTAAGGTGTAAAAAACCCGTACCGTACCCCTTGTGAAAAAGATAGCTCAAAAGATCTGTGTTTTGTCCTCTTATTTTATTGAATGCTAACATGTGAGGGTGTCCATCTAACTTTGTCCTATTATAGGTAATATTTTTACCATGTCAATAATAATATATAAATTTCATTATTTATCTCCAAAAATTATTTTCGATATATCATATACTCAGAACAAACAATAAAAATATAGATAAA</genome_strand>
        <mrna_strand>CAAAACTTTTTCTGTCAAAAAAAGT............................................................................................................................-GATAAGTCTCTCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCTTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGTTGGTGAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATTTGACAGTCCGTTTTTTGGGGGGGTTTTCCTTGTGTTTATCCATTTCCCCCCAGATTATCCATTCAAACCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTTTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCCATTTGCTTTTTGCTTGCTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGAGCGAAGTATGAGAGTTTTGCCAGATCATGGACCCAGAAATTCGCAATGGGTTGAACGCATTTGGTTTTACTTTCATGAATATCATTGGACCTTTATGCTATAGTAGTAAATAAACAAAGGCATGGTGCCCAATTTTTAAGATAATGGGGTTTTTTGTTTTTTGGTAATTTTCCCCTT-AGTTTTTGACTCGTTAACGATTTATCATTTGGTGAAA-TTCAGATATGTTTTTGTTGCCCTTGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E429817" ref_strand="+" ref_description="SGN-E429817 [STM-52-N23]">
      <seq>actctgttctctcaaaaaaagtgataagtctctcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcttgcagtgcaggtcctgttggtgaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgtgtctatccatttccccccagattatccattcaaacccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttccatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagagcgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacgcatttggttctactctcatgaatatcatcggacctttatgctatagtagtaaataaacaaaggcatggtgcacaatttttaagatattggtgttttttgttttctggtatttttccctttagtttttgactcgttgacgatttatcatttggtgacattcagatatgtttttgctgccatatgaaatttgcncaatattcacctactatctttnttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="49126" stop="51683"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49281" g_stop="49301" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49302" i_stop="49427" i_length="126">
            <donor d_prob="0.789" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="113" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="241" r_length="128" r_score="0.938"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="346" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51019" g_stop="51351" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="678" r_length="332" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E429817" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49281" e_stop="49301"/>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGCTTTTACCTTGAAAAAAAGTGCATACCGTAACAACTTCTATGAAATTATTTTTGAAGTGTAATCATCTTTTACTAAAGAAAAAATTCTAATTCTTGATTATTTGGCCTTCCTTTGGCATTATTGGTTTGGATTTCTTTTTGCAGTGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTAT-AGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACATGTGAA</genome_strand>
        <mrna_strand>ACTCTGTTCTCTCAAAAAAAG..............................................................................................................................TGATAAGTCTCTCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCTTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGTTGGTGAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGTGTCTATCCATTTCCCCCCAGATTATCCATTCAAACCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCCATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGAGCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACGCATTTGGTTCTACTCTCATGAATATCATCGGACCTTTATGCTATAGTAGTAAATAAACAAAGGCATGGTGCACAATTTTTAAGATATTGGTGTTTTTTGTTTTCTGGTATTTTTCCCTTT-AGTTTTTGACTCGTTGACGATTTATCATTTGGTGACA-TTCAGATATGTTTTTGCTGCCATATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458026" ref_strand="+" ref_description="SGN-E458026 [cPRO-4-O2]">
      <seq>tacacactcactctgttctctcaaaaaaagtgataagtctctcaaattcgttatggcttcaaagaggattcagaaggaattgaaggacttgcagaaagacccccctgcttcttgcagtgcaggtcctgttggtgaggatatgttccattggcaagctaccataatgggtccatctgacagtccgttttctgggggtgttttccttgtgtctatccatttccccccagattatccattcaaacccccaaaggtctctttcaaaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttccatttgctctttgcttactgatcccaatccagatgatcctttagtgccagagattgctcacatgtacaagacggatagagcgaagtatgagagtactgccagatcatggacccagaaatacgcaatgggttgaacgcatttggttctactctcatgaatatcatcggacctttatgctatagtagtaaataaacaaaggcatggtgcacaatttttaagatattggggttttttgttttctgggatttttccctttagtttttgactcgttaacgatttatcatttggtggaattcagatatgtttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="49126" stop="51639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49428" g_stop="49519" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="122" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="250" r_length="128" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="355" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51019" g_stop="51339" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="675" r_length="320" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E458026" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49428" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTAT-AGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTG</genome_strand>
        <mrna_strand>TGATAAGTCTCTCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCTTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGTTGGTGAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGTGTCTATCCATTTCCCCCCAGATTATCCATTCAAACCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCCATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGAGCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACGCATTTGGTTCTACTCTCATGAATATCATCGGACCTTTATGCTATAGTAGTAAATAAACAAAGGCATGGTGCACAATTTTTAAGATATTGGGGTTTTTTGTTTTCTGGGATTTTTCCCTTT-AGTTTTTGACTCGTTAACGATTTATCATTTGGTGGAA-TTCAGATATGTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E580843" ref_strand="+" ref_description="SGN-E580843 [6086]">
      <seq>gaaggacttgcagaaagacccccctgcttcttgcagtgcaggtcctgttggtgaggatatgttccattgggcaagctaccataattgggtccatctagacagtccgttttctgggggtgtatttccttgtgtctatccatttccccccagattatccattcaaacccccaaaggtctctttcaaaaccaaggattttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaggaacaatggagccctgctcttactgtatccaatgtgctgctttccatttgctctttgcttactgatcccaatccaggatgatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="49179" stop="51369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49479" g_stop="49519" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49917" g_stop="50044" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="173" r_length="132" r_score="0.875"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="278" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.926" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51019" g_stop="51069" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="330" r_length="52" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E580843" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>325</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E580843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49479" e_stop="49519"/>
          <exon e_start="49917" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAGGTATATATGAGTGTGACTTGTTCTTGCTTAATGTCTCTTTATAGCCATGCTCAATAGATATCCCCTCTCGTCTTCCCCATATCTGCAGCTTGGATTTGTGTTGGAAATATTTGAGACACATCAGATATGTGCTGGGAACAATCTGATGATTTCTTTCCCCTACCATCCGATGGGTAGTCATTACTTACTGTTCATTTGGTCCTCTTCTTCTTTGTTTCCCTTTCCCCCTTATGTTGGTTGAGGTTTGGGGTAGGATTGACTGAATAACTGGTGACAATTCTTTTGGTTCTGTTAATATTTTGTTAAGACATGTCTGCACTTGTGTTGGTATTTGTGAAAATTGTTTACTTTCAATTTGGATGCTGTTTTGGGCTGAAAATTGTTTTGCTTCTTGCAGGCCCTGTAGGTCAGGATATGTTCCATT-GGCAAGCTACCATAA-TGGGTCCATCT-GACAGTCCGTTTTCTGGGGGTGT-TTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGG-TTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCA-GATGATCCT</genome_strand>
        <mrna_strand>GAAGGACTTGCAGAAAGACCCCCCTGCTTCTTGCAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................GTCCTGTTGGTGAGGATATGTTCCATTGGGCAAGCTACCATAATTGGGTCCATCTAGACAGTCCGTTTTCTGGGGGTGTATTTCCTTGTGTCTATCCATTTCCCCCCAGATTATCCATTCAAACCCCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCAAAACCAAGGATTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCT-AAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAT..........................................................................................GTGCTGCTTTCCATTTGCTCTTTGCTTACTGATCCCAATCCAGGATGATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550964" ref_strand="+" ref_description="SGN-E550964 [TUS-54-J15]">
      <seq>tttccttgcatctatccgtttccctccagattatcctttcaagcccccgaaggtctctttcttaaccaaggttttccacccaaacatcaacagtaatggtagtatttgtcttgatatcctaaaggaacaatggagccctgctcttactgtatccaaggtgctgctttctatttgctctttgcttactgatcccaatccagatgatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="49693" stop="51369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49993" g_stop="50044" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50824" g_stop="50928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="157" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51019" g_stop="51069" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="208" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E550964" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>208</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49993" e_stop="50044"/>
          <exon e_start="50824" e_stop="50928"/>
          <exon e_start="51019" e_stop="51069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAGGTAGTTTTGAAGTCTTGCCAAGTTTTTTTTTTTTTTTGTGTGTGTTTTGTAAAATTTCTCTTGCTCCTATTTCTAACATTCCTTACCTTAGCAATTCTGTCTTGCCGTGGAGTACAACTATTTACTGCAAGAGTTTCCAGTAGATTAAACCTGAACTCCAATGTATTTGTTATACATATTTGTTATTTGATATGTTTTACATGAGCTGATGTCTCATCGGAGATAATCTATCTACCTCCACAAGGTAGGGCAATGCTGCGCACACATCACCCTCCCGAACTCCACAAGTTGGATCACACTTGATTTGGTGTTGTTGTTGTTGTATGTTAGGTCCGATAAAACTTAATGTTCCAATATTTGCTGTGATGGTAAAATATATTATTAAACCAAGTAACACAGAAATGGAGTTTTTCAAGCAACCTAGGGTTGTTCAAAAGACGCAAAATCCTGCATCTACCAGGATGGATTTGGCTCTAGACAACCATTGGCGTTCAATTCTTTTTCTTGTTGGATCTCAGTATGGATGTTTGCCATTCTTTTATTTGCCTTTGATGTGTTTTATGTAGTCCTTGCTTAAATGATTTATACTCGCGTTTCACTATATAGAAGAACCCATTCTCAGCTTCCTTGTGTATCATTGGAATAACCAAGGACAATTATGTGCTATTGTTTTTGCTTGTTACATGTAAATACCAGCAAATGCCATCTCCCTTGTATTTCTCGATTCTTAATTTGTTGCAAAACCCTGCTTTACTTTGTTTTGACTCTTAATACTGTAGGTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAGGTAAAGTATATCATGCTCTTCTTAGCTCAATTCTAAAGCATCTGCTTTATGTATATACATTTTGGTGACAATTATGCTGGGAGATTGCAGGTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCT</genome_strand>
        <mrna_strand>TTTCCTTGCATCTATCCGTTTCCCTCCAGATTATCCTTTCAAGCCCCCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTTCTTAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG..........................................................................................GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746226" ref_strand="+" ref_description="SGN-E746226 [GI|47104828]">
      <seq>gttgagtgagagacagaaaaagatactctctccgcatctatacatatagagagggaaaacctatatttatagagagagaaactctagagagagaaaaagccatgtatgtgtatatataggctatatagattacagtgaaaaaaactttctttttcattcctccattattcgttcattctctcagctcaaagaccacagaattttcaagaaatttatgacgttttgaagttaaagttttggtttttttccagatttttctcggaatttatgatttcagagaaaaaaaatcaatgcaaaagctccgtttaatggtcgatttagcttgcgttttgttagggttcagtagtgaaacttgagctcggatggttttcctgcggaacagcatagattgctttaaacgttaagagccacatttccttcgttattcttacatcctctttgttggaaggatgtcagaatggttggatgcatatgatgacgtaagagaaagaagatcagacttcgaggtttcagaggatgaaagacgacgttcacgaattggtactttcaagaaaaaggcattacatgcttcaaacaagttcacccactctctgaagaaaagaggaaaaaggaaagtggactacaggttcccttcagtttcaatagaggatgtacgtgatgcaaaagaggagaatgctgtctgtgaattgcgtcaaaggctgctagagcggaatttgttgccatccatacatgatgactaccatacattgttgagattcttaaaggcaagagatctcaatgttgagaaaactattccgatgtgggaagaaatgcttaactggaggaaagagtttggagcagacacaatattgcaggattttgactttgacgagttagaagaagtattgcagttttacccacaaggatatcatggggttgatagggagggaagacctgtttatatcgaaaggcttggacaagctaatccgaacaaactaatgcggataaccacaattgatcgctacataaaatatcatgtccaagaatttgaaagggcactacatgagaagttccctgcatgttctgttgctgcaaagaaaagaatctgcacaacaactacaattttggatgtgcaaggcttagggattaagaatttcacaaggacagctgctagtcttttggcggccatggcaaaaattgataatagctattatcctgagacactgcatcggatgttcattgtcaatgctggccctggcttcaaaaagatgctctggccagcagctcaaaaatttctggatgcaaagactattgcaaagatacaggtgctcgatcccaaatccttgggtaaactacatgaagttattgacccaagtcaattgcctgactttttaggtggctcttgtacctgttctgacgagggtggttgcctcaggtctaacaagggtccatggagtgatcctgaagtaatgaagcttgtctataatgtagaggcaacaactgtgaaggaaatctctagaaaacttggtgaccaaaggaaaattgaatcctatatacaaatacgcccttcaaagggaaggagcagagacacatccacaagtgattcagtatcggatgctgctgacttgtgttcaccaattagaggaaatagtagctcaattttgaggctgaccccagtagatgaagaagctaggtcatcagattcaacagcctattgtagctgtgatgatgaattcagcctgggtgatcgaggtgtcactaatgagcatggattgctgcattggcaagagcagtctcctgtgagcagtccaatgaatcggtccactaatacattgcctcattctggaggtacctgggcaataaattggtgtgaaagaatccaagagaagattctgagcagctgtttcagttgtttggaaaggaaactgattcctttcatacttaaactctttgcatttattcgtagtcttcccttcgagtactggaggaaacggacaaatgtttttccgactaatgcattggaagaacgacaagggagcagttcatccattaatgatgaagcagttcaaagagtaagggagatccatccatgcatgcagcgtcttcataaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="57346" stop="63269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57646" g_stop="57988" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57989" i_stop="58873" i_length="885">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58874" g_stop="58986" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="456" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58987" i_stop="59093" i_length="107">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59094" g_stop="59391" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="754" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59392" i_stop="59658" i_length="267">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59659" g_stop="59758" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="755" r_stop="854" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59759" i_stop="59847" i_length="89">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59848" g_stop="60114" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="855" r_stop="1121" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="60115" i_stop="60607" i_length="493">
            <donor d_prob="0.828" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="60608" g_stop="60685" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1122" r_stop="1199" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="60686" i_stop="60787" i_length="102">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60788" g_stop="60892" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1200" r_stop="1304" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60893" i_stop="60998" i_length="106">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="60999" g_stop="61048" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1305" r_stop="1354" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="61049" i_stop="61142" i_length="94">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="61143" g_stop="61242" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1355" r_stop="1454" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="61243" i_stop="61358" i_length="116">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.866" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="61359" g_stop="61457" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1455" r_stop="1553" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="61458" i_stop="61539" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="61540" g_stop="61653" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1554" r_stop="1667" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="61654" i_stop="61757" i_length="104">
            <donor d_prob="0.533" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="61758" g_stop="61917" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1668" r_stop="1827" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="61918" i_stop="62706" i_length="789">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="62707" g_stop="62981" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1828" r_stop="2102" r_length="275" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E746226" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2102</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57646" e_stop="57988"/>
          <exon e_start="58874" e_stop="58986"/>
          <exon e_start="59094" e_stop="59391"/>
          <exon e_start="59659" e_stop="59758"/>
          <exon e_start="59848" e_stop="60114"/>
          <exon e_start="60608" e_stop="60685"/>
          <exon e_start="60788" e_stop="60892"/>
          <exon e_start="60999" e_stop="61048"/>
          <exon e_start="61143" e_stop="61242"/>
          <exon e_start="61359" e_stop="61457"/>
          <exon e_start="61540" e_stop="61653"/>
          <exon e_start="61758" e_stop="61917"/>
          <exon e_start="62707" e_stop="62981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAGTGAGAGACAGAAAAAGATACTCTCTCCGCATCTATACATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAGGGTTCAGGTGAGTTTTTTTTTTTGTGGGATTTTGTTTATATGAGTTAAAAACTAGAAAGTTCTTATTTTTATTGTGTGTTTCGATTTTTTAGATGGTTTTTGTTATTAATTGGGATTAATTATGATGTGGGGTTGTGAGATCTGAGCTAAATTTACTGGCTTGAAACAGTTTGATTGAGTTTTTTTTCCATGTGATCAGCAATTTGCTGATTTTTGTATTTACCAACTTTTTTTTGAGACCTAAGTTTTTTGATGGATGGAAACTTAGCATTTCCGTGAATGCAGTTATCAGTTTAAGAAATGTTCATGATGGTCAATACAATTTGGGGTATGTGATATAGAAAATCTCAGCTAGTTTGTGATTTGAGGCATAGTTGATTGATTAGTTGGATATATGGGTGTAGAGTGTTTGACAATGCACACAGTGTGGGGTTGATTTCTCGGATGGTGGCTCAATTAAAAGTTATTAGCTCTGAAAGAAAATGTGTAAGCTTTTCTAGTGACCCCATGAGAAATTTGTGCATTTTGGATTTAGATCTGTGAAGGCAATTTAATTTATAGGGATAGAACTGGCAGGAAATGGATTTTCAGTTTCCCAGTTTTTATTTATTGGTTCCTGACAGCACTACTTCACTATAATGTGTATGCTGTTCTAGTCGTTGCGTGTTGCGCAAGCACTGACAATTGAAATCAGTGGACTTCTAGTAAATGAAATAGAGGACTCTCTCTGCATAGGAAGAATGAGTTTCAAATTTTTAGGAAGATACGTGTCACTTTCATCATTTAATGTTCTTCTTATCTTCCAGATATTAGTTAATGTGTCATCTTTTCATTTCTTTCTGCTGTGTTAAGTTGAGATTTTGACTGGAGTTGCTTTTTGTCCCATATTTAGTAGTGAAACTTGAGCTCGGATGGTTTTCCTGCGGAACAGCATAGATTGCTTTAAACGTTAAGAGCCACATTTCCTTCGTTATTCTTACATCCTCTTTGTTGGAAGGATGTCAGGTTTGTGCTTGCTATTTAATAATTGACTTTAGGAACTGTTATGGATGATTTAGTTTGTAATTTAAGAACTCATATACGCATATTCTGCGTGATATCTTGTATTCTAGAATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAGGTGCATTTTTTTTCTGAAAAATTATTCGGCTGATTTTTCATGTGTGAACCCCTAGGTAGCAATGACAGTTTTCATTGGAAATATGGATGAAGAAGCAGTATTATTTGATGAAGTTGCATCCTTAAACATATTTTGATTTTCCCTACCAATTTTCTTGAGGCTTTGCTTACAGTTGCATTGCTGTTTGTTTTCTGCACCTGCATACTGTGTCCTTATATCTTGTGGCCAGATGTTTAACCTAATTTTATTAACATTAATTTTGTGTAGATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAGGTATTTAATAGTTAATACTATTACATCAACATTCGTTTCACTATTGTTCTGTGTAATTTAGATTCTAATTGGAACTTGTGACCACTCAGGATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGATGTGCAAGGCTTAGTATGTTAATTCTATCAGTGGCTAATTTACTTAATTGATGATGTTTCTAACTTGTATATCTTTCTAATCTACATGGTCAGAATCATTTTGGACACTTAACTGCATTGACTAGAGACTTCTTTTTTCTATTACAAGGTCGTATTGACATGCATGAAACATCTGACTGGTATTACAAATAGCTAGCATGCCCATGGGTGGTTTTACTTGGGTCGAGATCAATTATTTTCATCATTTGCCCAACTTGATCATACACAAGAGTATCAGAATTTTTTCCTCCAAATTTTTTTTGTAGTGTCCTTATGTAGCAATGAAGATATCATGAGTATTTTCTTGCATTAATACAATTTTGTGCTCGCCGTTTCCGTTACTAATCATTCTCAATCAAGGAATTTTCCCTATGTCGAGCTTTTTTAGAGTTTTGTTCCTAATGTTTTATTAATACTATTTGTTATTATTCAAGTTCAACTTGTAATATGGTATGCTGTAAATGCAGGGGATTAAGAATTTCACAAGGACAGCTGCTAGTCTTTTGGCGGCCATGGCAAAAATTGATAATAGCTATTATCCTGAGGTATAGCTGTTAACTGTGAACATCTATAAATGAGACTCCAAATAGTTTGGTTAGACTCTATTGTCATGGAATACCTTTATAATGTCCAACATTTCTTTGTAGACACTGCATCGGATGTTCATTGTCAATGCTGGCCCTGGCTTCAAAAAGATGCTCTGGCCAGCAGCTCAAAAATTTCTGGATGCAAAGACTATTGCAAAGATACAGGTAGCAGAGGAATCATGTTTTTTTTGTTCGCTCAATTATGTTTTTTTTTGTTCGCTCTCTAACTACAATTGACTGAATCACTGTGTTTCAATCTTTACTTTTGTAGGTGCTCGATCCCAAATCCTTGGGTAAACTACATGAAGTTATTGACCCAAGGTTCATTATTTGTTTTGTTGTATGTTTTGCTTTGAAGAATTAGATCATTCAACCGTATATCTGATTATCTCTCTCTCTCTCTCTCTCTCAAAAGTCAATTGCCTGACTTTTTAGGTGGCTCTTGTACCTGTTCTGACGAGGGTGGTTGCCTCAGGTCTAACAAGGGTCCATGGAGTGATCCTGAAGTAATGAAGGTGAGCATGCCAGTTCAGTTGTATTATTCTATGACATATTCTTCATCTTGGTAAGCTTTATCTAGTCCTGGAGGTGTGAACTAGTTTGTAATAACCTGTTATTTTCTCCTCTTTAGCTTGTCTATAATGTAGAGGCAACAACTGTGAAGGAAATCTCTAGAAAACTTGGTGACCAAAGGAAAATTGAATCCTATATACAAATACGCCCTTCAAAGGTAAATTTTTTCACTTTGGCATGCTCCTTTTTTTCTTTTTCAGTTGTCTTCCTATGTATGACACAATTTATTATGTGTTCAGGGAAGGAGCAGAGACACATCCACAAGTGATTCAGTATCGGATGCTGCTGACTTGTGTTCACCAATTAGAGGAAATAGTAGCTCAATTTTGAGGCTGACCCCAGTAGATGAAGAAGTGAGTTTTGCAAAGCATAATGTACTTCTGTAGTTGCAGTGCACATGTGCACTTGCGCTTCTTTATATATCACACTTTTTGACTTATAGACATTGGTTTCGTAGGCTAGGTCATCAGATTCAACAGCCTATTGTAGCTGTGATGATGAATTCAGCCTGGGTGATCGAGGTGTCACTAATGAGCATGGATTGCTGCATTGGCAAGAGCAGTCTCCTGTGAGCAGTCCAATGAATCGGTCCACTAATACATTGCCTCATTCTGGAGGTATTTGTCTTGTTTATCATGAATTCCATCAAAAGAACCTTTAATTGATAGCTACCTTCACTAATCACTAGTGTGTTGTAAGACGTGGATTGGTTTATAGAGACACCATGAGAATTCAAAGTTACCAGTTTCAAAAAAGAAAATGACACCATGAGAATTATAAAACTCTATTAGTTGAATCAATTCTCAGTTCCATGATATAGGCACAGACAAGTTTTCTTCTGGAGTGTAACTCCACTCCTGTAGAAATCATAGGGGACTAATTAGTGTCTGAAGTTATAATAAACTTGAGAGGAAGTTATGCTGCCACACTACACTTCTCCACCCTCCAAGGAAAAGAAACCTTAAAAGAAAGAATGACTCTTTATGTGTATGAATTTCAGAAGCGGGATTTCTCTTGTCTCAAAACCTTTTCCTTTTAGCATGTGAAAGGAATGTGGGAGATGAAAAACTTCTTGTTTTAAGTCTTATTTGCCTTGCTAAAAGTCCCCTTTGGCTGGTAGGTGTGCTCACCTGGTTTGTTTTTGGCCTTTGTATATCCACCGTATTTTTTCCCTTATTGAAGACTTCACAAAATCTATACTCTATCCATCATCTATACTCTATCCATCTCCTGGTACTCATTTTCATCATTTGTGTACTTACTCTGCAATGATGTGCTTCGCCATGTATATCTATGTAGTCTAGTCAATTGAACTCTGAGTTCTTCTCAGCTAAAACTCATGCTAGAATGGTAATTGTAAATTCATATATCGTGGGGTTCATGTCCATTATTCATGTTCTTTTTAGGTACCTGGGCAATAAATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAACTCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACGGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTA</genome_strand>
        <mrna_strand>GTTGAGTGAGAGACAGAAAAAGATACTCTCTCCGCATCTATACATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAGGGTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGAAACTTGAGCTCGGATGGTTTTCCTGCGGAACAGCATAGATTGCTTTAAACGTTAAGAGCCACATTTCCTTCGTTATTCTTACATCCTCTTTGTTGGAAGGATGTCAG...........................................................................................................AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAG...........................................................................................................................................................................................................................................................................ATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAG.........................................................................................GATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGATGTGCAAGGCTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTAAGAATTTCACAAGGACAGCTGCTAGTCTTTTGGCGGCCATGGCAAAAATTGATAATAGCTATTATCCTGAG......................................................................................................ACACTGCATCGGATGTTCATTGTCAATGCTGGCCCTGGCTTCAAAAAGATGCTCTGGCCAGCAGCTCAAAAATTTCTGGATGCAAAGACTATTGCAAAGATACAG..........................................................................................................GTGCTCGATCCCAAATCCTTGGGTAAACTACATGAAGTTATTGACCCAAG..............................................................................................TCAATTGCCTGACTTTTTAGGTGGCTCTTGTACCTGTTCTGACGAGGGTGGTTGCCTCAGGTCTAACAAGGGTCCATGGAGTGATCCTGAAGTAATGAAG....................................................................................................................CTTGTCTATAATGTAGAGGCAACAACTGTGAAGGAAATCTCTAGAAAACTTGGTGACCAAAGGAAAATTGAATCCTATATACAAATACGCCCTTCAAAG..................................................................................GGAAGGAGCAGAGACACATCCACAAGTGATTCAGTATCGGATGCTGCTGACTTGTGTTCACCAATTAGAGGAAATAGTAGCTCAATTTTGAGGCTGACCCCAGTAGATGAAGAA........................................................................................................GCTAGGTCATCAGATTCAACAGCCTATTGTAGCTGTGATGATGAATTCAGCCTGGGTGATCGAGGTGTCACTAATGAGCATGGATTGCTGCATTGGCAAGAGCAGTCTCCTGTGAGCAGTCCAATGAATCGGTCCACTAATACATTGCCTCATTCTGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGGGCAATAAATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAACTCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACGGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369549" ref_strand="+" ref_description="SGN-E369549 [TUS-25-D18]">
      <seq>gagacagaaaaagatactctctccgcatctatacatatagagagggaaaacctatatttatagagagagaaactctagagagagaaaaagccatgtatgtgtatatatgggctatatagattacagtgaaaaaaactttctttttcattcctccattattcgttcattctctcagctcaaagaccacagaattttcaagaaatttatgacgctttgaagttaaagttttggtttttttccagatttttctcggaatttatgatttcagagaaaaaaaatcaatgcaaaagctccgtttaatggtcgatttagcttgcgttttgttagggttcagtagtgaaacttgagctcggatggttttcctgcggaacagcatagattgctttaaacgttaagagccacatttccttcgttattcttacatcctctatgtcggaaggatgtcagatgggttggatgcatatgatgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="57355" stop="59308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57655" g_stop="57988" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57989" i_stop="58873" i_length="885">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58874" g_stop="58986" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="447" r_length="113" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58987" i_stop="59093" i_length="107">
            <donor d_prob="0.866" d_score="0.96"/>
            <acceptor a_prob="0.948" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59094" g_stop="59117" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="471" r_length="24" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E369549" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57655" e_stop="57988"/>
          <exon e_start="58874" e_stop="58986"/>
          <exon e_start="59094" e_stop="59117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACAGAAAAAGATACTCTCTCCGCATCTATACATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAGGGTTCAGGTGAGTTTTTTTTTTTGTGGGATTTTGTTTATATGAGTTAAAAACTAGAAAGTTCTTATTTTTATTGTGTGTTTCGATTTTTTAGATGGTTTTTGTTATTAATTGGGATTAATTATGATGTGGGGTTGTGAGATCTGAGCTAAATTTACTGGCTTGAAACAGTTTGATTGAGTTTTTTTTCCATGTGATCAGCAATTTGCTGATTTTTGTATTTACCAACTTTTTTTTGAGACCTAAGTTTTTTGATGGATGGAAACTTAGCATTTCCGTGAATGCAGTTATCAGTTTAAGAAATGTTCATGATGGTCAATACAATTTGGGGTATGTGATATAGAAAATCTCAGCTAGTTTGTGATTTGAGGCATAGTTGATTGATTAGTTGGATATATGGGTGTAGAGTGTTTGACAATGCACACAGTGTGGGGTTGATTTCTCGGATGGTGGCTCAATTAAAAGTTATTAGCTCTGAAAGAAAATGTGTAAGCTTTTCTAGTGACCCCATGAGAAATTTGTGCATTTTGGATTTAGATCTGTGAAGGCAATTTAATTTATAGGGATAGAACTGGCAGGAAATGGATTTTCAGTTTCCCAGTTTTTATTTATTGGTTCCTGACAGCACTACTTCACTATAATGTGTATGCTGTTCTAGTCGTTGCGTGTTGCGCAAGCACTGACAATTGAAATCAGTGGACTTCTAGTAAATGAAATAGAGGACTCTCTCTGCATAGGAAGAATGAGTTTCAAATTTTTAGGAAGATACGTGTCACTTTCATCATTTAATGTTCTTCTTATCTTCCAGATATTAGTTAATGTGTCATCTTTTCATTTCTTTCTGCTGTGTTAAGTTGAGATTTTGACTGGAGTTGCTTTTTGTCCCATATTTAGTAGTGAAACTTGAGCTCGGATGGTTTTCCTGCGGAACAGCATAGATTGCTTTAAACGTTAAGAGCCACATTTCCTTCGTTATTCTTACATCCTCTTTGTTGGAAGGATGTCAGGTTTGTGCTTGCTATTTAATAATTGACTTTAGGAACTGTTATGGATGATTTAGTTTGTAATTTAAGAACTCATATACGCATATTCTGCGTGATATCTTGTATTCTAGAATGGTTGGATGCATATGATGACG</genome_strand>
        <mrna_strand>GAGACAGAAAAAGATACTCTCTCCGCATCTATACATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATGGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGCTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAGGGTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGAAACTTGAGCTCGGATGGTTTTCCTGCGGAACAGCATAGATTGCTTTAAACGTTAAGAGCCACATTTCCTTCGTTATTCTTACATCCTCTATGTCGGAAGGATGTCAG...........................................................................................................ATGGGTTGGATGCATATGATGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247126" ref_strand="+" ref_description="SGN-E247126 [cLEF-46-O13]">
      <seq>gagacagaaaaagatactctctccgcatctatagatatagagagggaaaacctatatttatagagagagaaactctagagagagaaaaagccatgtatgtgtatatataggctatatagattacagtgaaaaaaactttctttttcattcctccattattcgttcattctctcagctcaaagaccacagaattttcaagaaatttatgacgttttgaagttaaagttttggtttttttccagatttttctcggaatttatgatttcagagaaaaaaaatcaatgcaaaagctccgtttaatggtcgatttagcttgcgttttgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="57355" stop="58281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57655" g_stop="57981" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E247126" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57655" e_stop="57981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACAGAAAAAGATACTCTCTCCGCATCTATACATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAG</genome_strand>
        <mrna_strand>GAGACAGAAAAAGATACTCTCTCCGCATCTATAGATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334086" ref_strand="+" ref_description="SGN-E334086 [cTOD-24-P19]">
      <seq>tcagaatggttggatgcatatgatgacgtaagagaaagaagatcagacttcgaggtttcagaggatgaaagacgacgttcacgaattggtactttcaagaaaaaggcattacatgcttcaaacaagttcacccactctctgaagaaaagaggaaaaaggaaagtggactacaggttcccttcagtttcaatagaggatgtacgtgatgcaaaagaggagaatgctgtctgtgaattgcgtcaaaggctgctagagcggaatttgttgccatccatacatgatgactaccatacattgttgagattcttaaaggcaagagatctcaatgttgagaaaactattccgatgtgggaagaaatgcttaactggaggaaagagtttggagcagacacaatattgcaggattttgactttgacgagttagaagaagtattgcagttttacccacaaggatatcatggggttgatagggagggaagacctgtttatatcgaaaggcttggacaagctaatccgaacaaactaatgcggataaccacaattgatcgctacataaaatatcatgtccaagaatttgaaagggcactacatgagaagttccctgcatgttctgttgctgcaaagaaaagaatctgcacaacaactacaattttggatgtgcaaggcttagggattaagaatttcacaaggacagctgctagtcttttggcggccatggcaaaaattgataatagctattatcctgagaacactgcatcggatgtcatttgtcatgctggccctggcttcaaaagatgctctggccagcagctcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="58792" stop="61158"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58983" g_stop="58986" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="4" r_length="4" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58987" i_stop="59093" i_length="107">
            <donor d_prob="0.866" d_score="0.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59094" g_stop="59391" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="302" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59392" i_stop="59658" i_length="267">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59659" g_stop="59758" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="402" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59759" i_stop="59847" i_length="89">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59848" g_stop="60114" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="669" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60115" i_stop="60607" i_length="493">
            <donor d_prob="0.828" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60608" g_stop="60685" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="747" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="60686" i_stop="60787" i_length="102">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="60788" g_stop="60858" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="748" r_stop="817" r_length="70" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E334086" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58983" e_stop="58986"/>
          <exon e_start="59094" e_stop="59391"/>
          <exon e_start="59659" e_stop="59758"/>
          <exon e_start="59848" e_stop="60114"/>
          <exon e_start="60608" e_stop="60685"/>
          <exon e_start="60788" e_stop="60858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGTGCTTGCTATTTAATAATTGACTTTAGGAACTGTTATGGATGATTTAGTTTGTAATTTAAGAACTCATATACGCATATTCTGCGTGATATCTTGTATTCTAGAATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAGGTGCATTTTTTTTCTGAAAAATTATTCGGCTGATTTTTCATGTGTGAACCCCTAGGTAGCAATGACAGTTTTCATTGGAAATATGGATGAAGAAGCAGTATTATTTGATGAAGTTGCATCCTTAAACATATTTTGATTTTCCCTACCAATTTTCTTGAGGCTTTGCTTACAGTTGCATTGCTGTTTGTTTTCTGCACCTGCATACTGTGTCCTTATATCTTGTGGCCAGATGTTTAACCTAATTTTATTAACATTAATTTTGTGTAGATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAGGTATTTAATAGTTAATACTATTACATCAACATTCGTTTCACTATTGTTCTGTGTAATTTAGATTCTAATTGGAACTTGTGACCACTCAGGATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGATGTGCAAGGCTTAGTATGTTAATTCTATCAGTGGCTAATTTACTTAATTGATGATGTTTCTAACTTGTATATCTTTCTAATCTACATGGTCAGAATCATTTTGGACACTTAACTGCATTGACTAGAGACTTCTTTTTTCTATTACAAGGTCGTATTGACATGCATGAAACATCTGACTGGTATTACAAATAGCTAGCATGCCCATGGGTGGTTTTACTTGGGTCGAGATCAATTATTTTCATCATTTGCCCAACTTGATCATACACAAGAGTATCAGAATTTTTTCCTCCAAATTTTTTTTGTAGTGTCCTTATGTAGCAATGAAGATATCATGAGTATTTTCTTGCATTAATACAATTTTGTGCTCGCCGTTTCCGTTACTAATCATTCTCAATCAAGGAATTTTCCCTATGTCGAGCTTTTTTAGAGTTTTGTTCCTAATGTTTTATTAATACTATTTGTTATTATTCAAGTTCAACTTGTAATATGGTATGCTGTAAATGCAGGGGATTAAGAATTTCACAAGGACAGCTGCTAGTCTTTTGGCGGCCATGGCAAAAATTGATAATAGCTATTATCCTGAGGTATAGCTGTTAACTGTGAACATCTATAAATGAGACTCCAAATAGTTTGGTTAGACTCTATTGTCATGGAATACCTTTATAATGTCCAACATTTCTTTGTAG-ACACTGCATCGGATGTTCATTGTCAATGCTGGCCCTGGCTTCAAAAAGATGCTCTGGCCAGCAGCTCAAAA</genome_strand>
        <mrna_strand>TCAG...........................................................................................................AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAG...........................................................................................................................................................................................................................................................................ATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAG.........................................................................................GATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGATGTGCAAGGCTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATTAAGAATTTCACAAGGACAGCTGCTAGTCTTTTGGCGGCCATGGCAAAAATTGATAATAGCTATTATCCTGAG......................................................................................................AACACTGCATCGGATGTCATTTGTC-ATGCTGGCCCTGGCTTC-AAAAGATGCTCTGGCCAGCAGCTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333879" ref_strand="+" ref_description="SGN-E333879 [cTOD-24-C8]">
      <seq>tcagaatggttggatgcatatgatgacgtaagagaaagaagatcagacttcgaggtttcagaggatgaaagacgacgttcacgaattggtactttcaagaaaaaggcattacatgcttcaaacaagttcacccactctctgaagaaaagaggaaaaaggaaagtggactacaggttcccttcagtttcaatagaggatgtacgtgatgcaaaagaggagaatgctgtctgtgaattgcgtcaaaggctgctagagcggaatttgttgccatccatacatgatgactaccatacattgttgagattcttaaaggcaagagatctcaatgttgagaaaactattccgatgtgggaagaaatgcttaactggaggaaagagtttggagcagacacaatattgcaggattttgactttgacgagttagaagaagtattgcagttttacccacaaggatatcatggggttgatagggagggaagacctgtttatatcgaaaagcttggacnagctaatccgaacaaactaatgcggataaccacaattgatcgctacataaaatatcatgtcccagaatttgaaagggcactacatgagaagttccctgcatggtctgttgctgcaaagaaagaaatctgcacacactaccattttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="58792" stop="60402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58983" g_stop="58986" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="4" r_length="4" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58987" i_stop="59093" i_length="107">
            <donor d_prob="0.866" d_score="0.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59094" g_stop="59391" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="302" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59392" i_stop="59658" i_length="267">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59659" g_stop="59758" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="402" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59759" i_stop="59847" i_length="89">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59848" g_stop="60102" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="655" r_length="253" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E333879" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58983" e_stop="58986"/>
          <exon e_start="59094" e_stop="59391"/>
          <exon e_start="59659" e_stop="59758"/>
          <exon e_start="59848" e_stop="60102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGTGCTTGCTATTTAATAATTGACTTTAGGAACTGTTATGGATGATTTAGTTTGTAATTTAAGAACTCATATACGCATATTCTGCGTGATATCTTGTATTCTAGAATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAGGTGCATTTTTTTTCTGAAAAATTATTCGGCTGATTTTTCATGTGTGAACCCCTAGGTAGCAATGACAGTTTTCATTGGAAATATGGATGAAGAAGCAGTATTATTTGATGAAGTTGCATCCTTAAACATATTTTGATTTTCCCTACCAATTTTCTTGAGGCTTTGCTTACAGTTGCATTGCTGTTTGTTTTCTGCACCTGCATACTGTGTCCTTATATCTTGTGGCCAGATGTTTAACCTAATTTTATTAACATTAATTTTGTGTAGATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAGGTATTTAATAGTTAATACTATTACATCAACATTCGTTTCACTATTGTTCTGTGTAATTTAGATTCTAATTGGAACTTGTGACCACTCAGGATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGAT</genome_strand>
        <mrna_strand>TCAG...........................................................................................................AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAG...........................................................................................................................................................................................................................................................................ATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAG.........................................................................................GATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAAGCTTGGACNAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCCAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGGTCTGTTGCTGCAAAGAAAGAAATCTGCAC-AC-ACTACCATTTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333419" ref_strand="+" ref_description="SGN-E333419 [cTOD-20-D16]">
      <seq>tcagaatggttggatgcatatgatgacgtaagagaaagaagatcagacttcgaggtttcagaggatgaaagacgacgttcacgaattggtactttcaagaaaaaggcattacatgcttcaaacaagttcacccactctctgaagaaaagaggaaaaaggaaagtggactacaggttcccttcagtttcaatagaggatgtacgtgatgcaaaagaggagaatgctgtctgtgaattgcgtcaaaggctgctagagcggaatttgttgccatccatacatgatgactaccatacattgttgagattcttaaaggcaagagatctcaatgttgagaaaactattccgatgtgggaagaaatgcttaactggaggaaagagtttggagcagacacaatattgcaggattttgactttgacgagttagaagaagtattgcagttttacccacaaggatatcatggggttgatagggagggaagacctgtttatatcgaaaggcttggacaagctaatccgaacaaactaatgcggataaccacaattgatcgctacataaaatatcatgtccaagaatttgaaagggcactacatgagaagttccctgcatgttctgttgctgcaaagaaaagaatctgcacaacaactacaattttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="58792" stop="60402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58983" g_stop="58986" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="4" r_length="4" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58987" i_stop="59093" i_length="107">
            <donor d_prob="0.866" d_score="0.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59094" g_stop="59391" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="302" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59392" i_stop="59658" i_length="267">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59659" g_stop="59758" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="402" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59759" i_stop="59847" i_length="89">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59848" g_stop="60102" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="657" r_length="255" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E333419" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58983" e_stop="58986"/>
          <exon e_start="59094" e_stop="59391"/>
          <exon e_start="59659" e_stop="59758"/>
          <exon e_start="59848" e_stop="60102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGTGCTTGCTATTTAATAATTGACTTTAGGAACTGTTATGGATGATTTAGTTTGTAATTTAAGAACTCATATACGCATATTCTGCGTGATATCTTGTATTCTAGAATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAGGTGCATTTTTTTTCTGAAAAATTATTCGGCTGATTTTTCATGTGTGAACCCCTAGGTAGCAATGACAGTTTTCATTGGAAATATGGATGAAGAAGCAGTATTATTTGATGAAGTTGCATCCTTAAACATATTTTGATTTTCCCTACCAATTTTCTTGAGGCTTTGCTTACAGTTGCATTGCTGTTTGTTTTCTGCACCTGCATACTGTGTCCTTATATCTTGTGGCCAGATGTTTAACCTAATTTTATTAACATTAATTTTGTGTAGATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAGGTATTTAATAGTTAATACTATTACATCAACATTCGTTTCACTATTGTTCTGTGTAATTTAGATTCTAATTGGAACTTGTGACCACTCAGGATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGAT</genome_strand>
        <mrna_strand>TCAG...........................................................................................................AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAG...........................................................................................................................................................................................................................................................................ATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAG.........................................................................................GATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334246" ref_strand="+" ref_description="SGN-E334246 [cTOD-21-N24]">
      <seq>aatggttggatgcatatgatgacgtaagagaaagaagatcagacttcgaggtttcagaggatgaaagacgacgttcacgaattgggactttcaagaaaaaggcattacatgcttcaaacaagttcacccactctctgaagaaaagaggaaaaaggaaagtggactacaggttcccttcagtttcaatagaggatgtacgtgatgcaaaagaggagaatgctgtctgtgaattgcgtcaaaggctgctagagcggaatttgttgccatccatacatgatgactaccatacattgttgagattcttaaaggcaagagatctcaatgttgagaaaactattccgatgtgggaagaaatgcttaactggaggaaagagtttggagcagacacaatattgcaggattttgactttgacgagttagaagaagtattgcagttttacccacaaggatatcatggggttgatagggagggaagacctgtttatatcgaaaggcttggacaagctaatccgaacaaactaatgcggataaccacaattgatcgctacataaaatatcatgtccaagaatttgaaagggcactacatgagaagttccctgcatgttctgttgctgcacagaaagaatctgcacaactactacattttggatgtgcaaggcttagggattatgaattcacaacgacagctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="58794" stop="60415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59094" g_stop="59391" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59392" i_stop="59658" i_length="267">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59659" g_stop="59758" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="398" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59759" i_stop="59847" i_length="89">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59848" g_stop="60114" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="663" r_length="265" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E334246" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59094" e_stop="59391"/>
          <exon e_start="59659" e_stop="59758"/>
          <exon e_start="59848" e_stop="60114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAGGTGCATTTTTTTTCTGAAAAATTATTCGGCTGATTTTTCATGTGTGAACCCCTAGGTAGCAATGACAGTTTTCATTGGAAATATGGATGAAGAAGCAGTATTATTTGATGAAGTTGCATCCTTAAACATATTTTGATTTTCCCTACCAATTTTCTTGAGGCTTTGCTTACAGTTGCATTGCTGTTTGTTTTCTGCACCTGCATACTGTGTCCTTATATCTTGTGGCCAGATGTTTAACCTAATTTTATTAACATTAATTTTGTGTAGATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAGGTATTTAATAGTTAATACTATTACATCAACATTCGTTTCACTATTGTTCTGTGTAATTTAGATTCTAATTGGAACTTGTGACCACTCAGGATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGATGTGCAAGGCTTA</genome_strand>
        <mrna_strand>AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGGACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAG...........................................................................................................................................................................................................................................................................ATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAG.........................................................................................GATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCACAG-AAAGAATCTGCACAACTACTAC-ATTTTGGATGTGCAAGGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736156" ref_strand="+" ref_description="SGN-E736156 [LC04CC06]">
      <seq>ctcttgtacctgttctgacgagggtggttgcctcaggtctaacaagggtccatggagtgatcctgaagtaatgaagcttgtctataatgtagaggcaacaactgtgaaggaaatctctagaaaacttggtgaccaaaggaaaattgaatcctatatacaaatacgcccttcaaagggaaggagcagagacacatccacaagtgattcagtatcggatgctgctgacttgtgttcaccaattagaggaaatagtagctcaattttgaggctgaccccagtagatgaagaagctaggtcatcagattcaacagcctattgtagctgtgatgatgaattcagcctgggtgatcgaggtgtcactaatgagcatggattgctgcattggcaagagcagtctcctgtgagcagtccaatgaatcggtccactaatacattgcctcattctggaggtacctgggcaataaattggtgtgaaagaatccaagagaagattctgagcagctgtttcagttgtttggaaaggaaactgattcctttcatacttaaactctttgcatttattcgtagtcttcccttcgagtactggaggaaacggacaaatgtttttccgactaatgcattggaagaacgacaagggagcagttcatccattaatgatgaagcagttcaaagagtaagggagatccatccatgcatgcagcgtcttcataaattggaaaatttattggaagaaataaacaaaaagcccgctgagatcccagcagagaaggatcgaatgcttcatcagtcacttaacaggatcaagtctgtagaaagtgacctagaaaaacaaaaagggtattgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="60867" stop="63402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61167" g_stop="61242" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61243" i_stop="61358" i_length="116">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.866" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61359" g_stop="61457" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="175" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61458" i_stop="61539" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61540" g_stop="61653" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="289" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61654" i_stop="61757" i_length="104">
            <donor d_prob="0.533" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61758" g_stop="61917" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="449" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61918" i_stop="62706" i_length="789">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62707" g_stop="63095" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="837" r_length="388" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="63096" i_stop="63205" i_length="110">
            <donor d_prob="0.747" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63206" g_stop="63213" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="838" r_stop="845" r_length="8" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E736156" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61167" e_stop="61242"/>
          <exon e_start="61359" e_stop="61457"/>
          <exon e_start="61540" e_stop="61653"/>
          <exon e_start="61758" e_stop="61917"/>
          <exon e_start="62707" e_stop="63095"/>
          <exon e_start="63206" e_stop="63213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTGTACCTGTTCTGACGAGGGTGGTTGCCTCAGGTCTAACAAGGGTCCATGGAGTGATCCTGAAGTAATGAAGGTGAGCATGCCAGTTCAGTTGTATTATTCTATGACATATTCTTCATCTTGGTAAGCTTTATCTAGTCCTGGAGGTGTGAACTAGTTTGTAATAACCTGTTATTTTCTCCTCTTTAGCTTGTCTATAATGTAGAGGCAACAACTGTGAAGGAAATCTCTAGAAAACTTGGTGACCAAAGGAAAATTGAATCCTATATACAAATACGCCCTTCAAAGGTAAATTTTTTCACTTTGGCATGCTCCTTTTTTTCTTTTTCAGTTGTCTTCCTATGTATGACACAATTTATTATGTGTTCAGGGAAGGAGCAGAGACACATCCACAAGTGATTCAGTATCGGATGCTGCTGACTTGTGTTCACCAATTAGAGGAAATAGTAGCTCAATTTTGAGGCTGACCCCAGTAGATGAAGAAGTGAGTTTTGCAAAGCATAATGTACTTCTGTAGTTGCAGTGCACATGTGCACTTGCGCTTCTTTATATATCACACTTTTTGACTTATAGACATTGGTTTCGTAGGCTAGGTCATCAGATTCAACAGCCTATTGTAGCTGTGATGATGAATTCAGCCTGGGTGATCGAGGTGTCACTAATGAGCATGGATTGCTGCATTGGCAAGAGCAGTCTCCTGTGAGCAGTCCAATGAATCGGTCCACTAATACATTGCCTCATTCTGGAGGTATTTGTCTTGTTTATCATGAATTCCATCAAAAGAACCTTTAATTGATAGCTACCTTCACTAATCACTAGTGTGTTGTAAGACGTGGATTGGTTTATAGAGACACCATGAGAATTCAAAGTTACCAGTTTCAAAAAAGAAAATGACACCATGAGAATTATAAAACTCTATTAGTTGAATCAATTCTCAGTTCCATGATATAGGCACAGACAAGTTTTCTTCTGGAGTGTAACTCCACTCCTGTAGAAATCATAGGGGACTAATTAGTGTCTGAAGTTATAATAAACTTGAGAGGAAGTTATGCTGCCACACTACACTTCTCCACCCTCCAAGGAAAAGAAACCTTAAAAGAAAGAATGACTCTTTATGTGTATGAATTTCAGAAGCGGGATTTCTCTTGTCTCAAAACCTTTTCCTTTTAGCATGTGAAAGGAATGTGGGAGATGAAAAACTTCTTGTTTTAAGTCTTATTTGCCTTGCTAAAAGTCCCCTTTGGCTGGTAGGTGTGCTCACCTGGTTTGTTTTTGGCCTTTGTATATCCACCGTATTTTTTCCCTTATTGAAGACTTCACAAAATCTATACTCTATCCATCATCTATACTCTATCCATCTCCTGGTACTCATTTTCATCATTTGTGTACTTACTCTGCAATGATGTGCTTCGCCATGTATATCTATGTAGTCTAGTCAATTGAACTCTGAGTTCTTCTCAGCTAAAACTCATGCTAGAATGGTAATTGTAAATTCATATATCGTGGGGTTCATGTCCATTATTCATGTTCTTTTTAGGTACCTGGGCAATAAATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAACTCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACGGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTAACAGGATCAAGTCTGTAGAAGTTGACCTAGAAAAAACAAAAAGGGTAAGGCTCATCAGTGAGGCAGGTCAAAAAAGTTTCACATAAAATATTTCCTTATAAAAGAATGTCTGTAAGTAGCAGTGTTCTCTTATTATGTTTTATATGTTCAACAGGTATTGCA</genome_strand>
        <mrna_strand>CTCTTGTACCTGTTCTGACGAGGGTGGTTGCCTCAGGTCTAACAAGGGTCCATGGAGTGATCCTGAAGTAATGAAG....................................................................................................................CTTGTCTATAATGTAGAGGCAACAACTGTGAAGGAAATCTCTAGAAAACTTGGTGACCAAAGGAAAATTGAATCCTATATACAAATACGCCCTTCAAAG..................................................................................GGAAGGAGCAGAGACACATCCACAAGTGATTCAGTATCGGATGCTGCTGACTTGTGTTCACCAATTAGAGGAAATAGTAGCTCAATTTTGAGGCTGACCCCAGTAGATGAAGAA........................................................................................................GCTAGGTCATCAGATTCAACAGCCTATTGTAGCTGTGATGATGAATTCAGCCTGGGTGATCGAGGTGTCACTAATGAGCATGGATTGCTGCATTGGCAAGAGCAGTCTCCTGTGAGCAGTCCAATGAATCGGTCCACTAATACATTGCCTCATTCTGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTGGGCAATAAATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAACTCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACGGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTAACAGGATCAAGTCTGTAGAAAGTGACCTAG-AAAAACAAAAAGG..............................................................................................................GTATTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E466965" ref_strand="+" ref_description="SGN-E466965 [cPRO-26-L7]">
      <seq>attggtgtgaaagaatccaagagaagattctgagcagctgtttcagttgtttggaaaggaaactgattcctttcatacttaaaatctttgcatttattcgtagtcttcccttcgagtactggaggaaacagacaaatgtttttccgactaatgcattggaagaacgacaagggagcagttcatccattaatgacgaagcagttcaaagagtaagggagatccatccatgcatgcagcgtcttcataaattggaaaatttattggaagaaataaacaaaaagcccgctgagatcccagcagagaaggatcgaatgcttcatcagtcacttgacaggatcaagtctgtagaagttgacctagaaaaaacaaaaagggtattgcatgcgacggtgttgaagcaacttgaaattacagagttagtggacaacctaaaagagtcgagctttcataggcggagattgtggtgttgaatattgaaatgttggagattcgagtacctgacaatgcgatgataactttttactgctaactatgctgcgaaaggagatgttagcttatgcacctccagcagtggtgaccaagttttcctttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="62422" stop="64069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62722" g_stop="63095" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63096" i_stop="63205" i_length="110">
            <donor d_prob="0.747" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63206" g_stop="63280" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="449" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63281" i_stop="63621" i_length="341">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63622" g_stop="63769" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="596" r_length="147" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E466965" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62722" e_stop="63095"/>
          <exon e_start="63206" e_stop="63280"/>
          <exon e_start="63622" e_stop="63769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAACTCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACGGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTAACAGGATCAAGTCTGTAGAAGTTGACCTAGAAAAAACAAAAAGGGTAAGGCTCATCAGTGAGGCAGGTCAAAAAAGTTTCACATAAAATATTTCCTTATAAAAGAATGTCTGTAAGTAGCAGTGTTCTCTTATTATGTTTTATATGTTCAACAGGTATTGCATGCGACGGTATTGAAGCAACTTGAAATTACAGAGTTATTGGACAACCTAAAAGAGTCGAGCTTTCATGTAAGCATCACATAACAATATGAACATATAGTTGGTCATCATTATCTTGTCAGCTCTACAGTCAATCAGTATATATGTGCTTAGCTGATTTATTGTCCTGTCATCTGATACTGTTTGCATTTATCTTGATATAGTTTGTGTTTATCTGTCTGCTGTTTTATTTTATTTTATAATTGTTCCCATGTTTGGCAAAAAGGCTAGGGGGTTGTTGTCATGTGATCAATTGGAAAACTAAAATGAAGGCAATTCCTTATGTTGGCTTCATTGTCTATTACTGAAAGTATAGTTTCAATTAATCCTTTGCGAATACAAGTCTGAGATCTGCTGATGTTTTGTTGCAGAGGCGGAGATTGTGGTGTTGAATATTGTAAGGTTGGAGATTTGAGTACCAGGACAACGCGATGATAACCTTTTACTGCTAACTATGCTGCGAAGGGAGATGTTAGCTTATGCACCTCCAGCAGTGGTGACAAAGTTTTCCTTTTTTTT</genome_strand>
        <mrna_strand>ATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAAATCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACAGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGACGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTGACAGGATCAAGTCTGTAGAAGTTGACCTAGAAAAAACAAAAAGG..............................................................................................................GTATTGCATGCGACGGTGTTGAAGCAACTTGAAATTACAGAGTTAGTGGACAACCTAAAAGAGTCGAGCTTTCAT.....................................................................................................................................................................................................................................................................................................................................................AGGCGGAGATTGTGGTGTTGAATATTGAAATGTTGGAGATTCGAGTACC-TGACAATGCGATGATAACTTTTTACTGCTAACTATGCTGCGAAAGGAGATGTTAGCTTATGCACCTCCAGCAGTGGTGACCAAGTTTTCCTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369548" ref_strand="+" ref_description="SGN-E369548 [TUS-25-D18](-)">
      <seq>atgttttttccgcctaatgcattggaagaacgacaagggagcagttcatccattaatgatgaagcagttcaaagagtaagggagatccatccatgcatgcagcgtcttcataaattggaaaatttattggaagaaataaacaaaaagcccgctgagatcccagcagagaaggatcgaatgcttcatcagtcacttaacaggatcaagtctgtagaagttgacctagaaaaaacaaaaagggtattgcatgcgacggtattgaagcaacttgaaattacagagttattggacaacctaaaagagtcgagctttcataggcggagattgtggtgttgaatattgtaaggttggagatttgagtaccaggacaacgcgatgataaccttttactgctaaatatgctgcgaagggagatgttagcttatgcacctccagcagtggtgacaaagttttcctttttttttttttgtacaatgtcctttacagaacatgcagttgttactgcaagatgatgtttgattatactgtactgttaaacatcttgaagaaaagtttaaaagaaagccctttgagggaataaagacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="62557" stop="64194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62857" g_stop="63095" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="240" r_length="240" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63096" i_stop="63205" i_length="110">
            <donor d_prob="0.747" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63206" g_stop="63280" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="315" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63281" i_stop="63621" i_length="341">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63622" g_stop="63889" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="582" r_length="267" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="583" polyA_stop="594"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E369548" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62857" e_stop="63095"/>
          <exon e_start="63206" e_stop="63280"/>
          <exon e_start="63622" e_stop="63889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATG-TTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTAACAGGATCAAGTCTGTAGAAGTTGACCTAGAAAAAACAAAAAGGGTAAGGCTCATCAGTGAGGCAGGTCAAAAAAGTTTCACATAAAATATTTCCTTATAAAAGAATGTCTGTAAGTAGCAGTGTTCTCTTATTATGTTTTATATGTTCAACAGGTATTGCATGCGACGGTATTGAAGCAACTTGAAATTACAGAGTTATTGGACAACCTAAAAGAGTCGAGCTTTCATGTAAGCATCACATAACAATATGAACATATAGTTGGTCATCATTATCTTGTCAGCTCTACAGTCAATCAGTATATATGTGCTTAGCTGATTTATTGTCCTGTCATCTGATACTGTTTGCATTTATCTTGATATAGTTTGTGTTTATCTGTCTGCTGTTTTATTTTATTTTATAATTGTTCCCATGTTTGGCAAAAAGGCTAGGGGGTTGTTGTCATGTGATCAATTGGAAAACTAAAATGAAGGCAATTCCTTATGTTGGCTTCATTGTCTATTACTGAAAGTATAGTTTCAATTAATCCTTTGCGAATACAAGTCTGAGATCTGCTGATGTTTTGTTGCAGAGGCGGAGATTGTGGTGTTGAATATTGTAAGGTTGGAGATTTGAGTACCAGGACAACGCGATGATAACCTTTTACTGCTAACTATGCTGCGAAGGGAGATGTTAGCTTATGCACCTCCAGCAGTGGTGACAAAGTTTTCCTTTTTTTTTTTTTTGTACAATGTCCTTTACAGAACATGCAGTTGTTACTGCAAGATGATGTTTGATTATACTGTACTGTTAAACATCTTGAAGAAAAGCTTAAAAGAAAGCCCTTTGAGGGTTTAGAG</genome_strand>
        <mrna_strand>ATGTTTTTTCCGCCTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTAACAGGATCAAGTCTGTAGAAGTTGACCTAGAAAAAACAAAAAGG..............................................................................................................GTATTGCATGCGACGGTATTGAAGCAACTTGAAATTACAGAGTTATTGGACAACCTAAAAGAGTCGAGCTTTCAT.....................................................................................................................................................................................................................................................................................................................................................AGGCGGAGATTGTGGTGTTGAATATTGTAAGGTTGGAGATTTGAGTACCAGGACAACGCGATGATAACCTTTTACTGCTAAATATGCTGCGAAGGGAGATGTTAGCTTATGCACCTCCAGCAGTGGTGACAAAGTTTTCC-TTTTTTTTTTTTTGTACAATGTCCTTTACAGAACATGCAGTTGTTACTGCAAGATGATGTTTGATTATACTGTACTGTTAAACATCTTGAAGAAAAGTTTAAAAGAAAGCCCTTTGAGGGAATAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702881" ref_strand="+" ref_description="SGN-E702881 [FA19DG12]">
      <seq>gtcatgacaatttacgcgtagaacggcgctagctgtagatgctgtacccactccatttattttttctttcttattatatgcttttaataattttatgtcgttattaaactcaaaatattttctattttctatttccaatatgaactcaaacttactgtaaacaattagctggcaagaacagagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64457" stop="67620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64757" g_stop="65177" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="478" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67320" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="861" r_length="383" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E702881" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702881" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64757" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATGACAATTTACGCGTAGAACGGCGCTAGCTGTAGATGCTGTACCCACTCCATTTATTTTTTCTTTCTTATTATATGCTTTTAATAATTTTATGTCGTTATTAAACTCAAAATATTTTCTATTTTCTATTTCCAATATGAACTCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGC</genome_strand>
        <mrna_strand>GTCATGACAATTTACGCGTAGAACGGCGCTAGCTGTAGATGCTGTACCCACTCCATTTATTTTTTCTTTCTTATTATATGCTTTTAATAATTTTATGTCGTTATTAAACTCAAAATATTTTCTATTTTCTATTTCCAATATGAACTCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E718262" ref_strand="+" ref_description="SGN-E718262 [FC04AF09]">
      <seq>aatcggccgaattgattttctattttctatttccaatatgaactcaaacttactgtaaacaattagctggcaagaacagagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64567" stop="67703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64859" g_stop="65177" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="376" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67403" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="842" r_length="466" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E718262" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64859" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAACTCAAAATATTTTCTATTTTCTATTTCCAATATGAACTCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACA</genome_strand>
        <mrna_strand>AATCGGCCGAATTGATTTTCTATTTTCTATTTCCAATATGAACTCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205327" ref_strand="+" ref_description="SGN-E205327 [cLEC-25-F19]">
      <seq>tcaaacttactgtaaacaattagctggcaagaacagagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64602" stop="67533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64902" g_stop="65177" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="333" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67233" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="629" r_length="296" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E205327" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64902" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGC</genome_strand>
        <mrna_strand>TCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205522" ref_strand="+" ref_description="SGN-E205522 [cLEC-28-N21]">
      <seq>tcaaacttactgtaaacaattagctggcaagaacagagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagcggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64602" stop="67441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64902" g_stop="65177" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="333" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67141" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="537" r_length="204" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E205522" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64902" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTT</genome_strand>
        <mrna_strand>TCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGCGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270810" ref_strand="+" ref_description="SGN-E270810 [cLEM-6-M13]">
      <seq>aaacttactgtaaacaattagctggcaagaacagagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64604" stop="67498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64904" g_stop="65177" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="331" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67198" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="592" r_length="261" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E270810" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64904" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCAT</genome_strand>
        <mrna_strand>AAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559117" ref_strand="+" ref_description="SGN-E559117 [18564]">
      <seq>ttagctggcaagaactgagataactttgttcaaagggaaagagaacagatagatctctttctatttctgggtttctttcaaagataacttttttctgggtttttgttgaaattttcttccaagaaatcatctttttccttttataatttgttattttagctcattttgctattatggagtgcagacattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcagaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacaatgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtctttttgccagcgagtgcaatggtgacaaaaaggggctaccatgtcctgattctgcatcatcagaatctgccagtgctaataatagtcatatgagctgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64621" stop="67537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64921" g_stop="65177" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="312" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67237" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="612" r_length="300" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E559117" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E559117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64921" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTA</genome_strand>
        <mrna_strand>TTAGCTGGCAAGAACTGAGATAA-CTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGGGTTTCTTTCAAAGATAAC-TTTTTTCTGGGTTTTTGTTGAAATTTTCTTCCAAGAAATCATCTTTTTCCTTTTATAATTTGTTATTTTAGCTCATTTTGCTATTATGGAGTGCAGACATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAGAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTTGCCAGCGAGTGCAATGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCATCATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212831" ref_strand="+" ref_description="SGN-E212831 [cLEC-73-E4]">
      <seq>aagaacagagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64630" stop="67557"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64930" g_stop="65177" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="305" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67257" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="625" r_length="320" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E212831" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64930" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATG</genome_strand>
        <mrna_strand>AAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200059" ref_strand="+" ref_description="SGN-E200059 [cLEC-8-M12]">
      <seq>agagataacctttgttcaaagggaaagagaacagatagatctctttctatttctgtttttttctcaaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64636" stop="67339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64936" g_stop="65177" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="299" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67039" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="401" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E200059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64936" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGT</genome_strand>
        <mrna_strand>AGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574093" ref_strand="+" ref_description="SGN-E574093 [33507]">
      <seq>ctttgttaaagggaaagagaacagatagatctctttctatttctgggtttctttcaaagataacttttttctgggtttttgttgaaattttcttccaagaaatcatctttttccttttataatttgttattttagctcattttgctatgatggagtgcagacattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacaatgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtcttttcgccagcgagtgcaatggtgacaaaaaggggctaccatgtcctgattctgcaatatcagaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctattacgggcttgttgctgttgcttctctgaagacctcttcaaggttttggcggtaatttctgtattctttattgtcaaatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64645" stop="67651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64945" g_stop="65177" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="288" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67351" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="703" r_length="415" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E574093" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64945" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGC-GTAGTTTCTGTATTCTTTATTGTCAAATATT</genome_strand>
        <mrna_strand>CTTTGTT-AAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGGGTTTCTTTCAAAGATAAC-TTTTTTCTGGGTTTTTGTTGAAATTTTCTTCCAAGAAATCATCTTTTTCCTTTTATAATTTGTTATTTTAGCTCATTTTGCTATGATGGAGTGCAGACATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTCGCCAGCGAGTGCAATGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCAATATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTATTACGGGCTTGTTGCTGTTGCTTCTCTGAAGACCTCTTCAAGGTTTTGGCGGTAATTTCTGTATTCTTTATTGTCAAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350917" ref_strand="+" ref_description="SGN-E350917 [cTOS-7-L13]">
      <seq>aaagatcactttttttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgntgcttctctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64701" stop="67599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65001" g_stop="65177" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="234" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67299" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="596" r_length="362" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E350917" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65001" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGA</genome_strand>
        <mrna_strand>AAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGNTGCTTCTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559661" ref_strand="+" ref_description="SGN-E559661 [19193]">
      <seq>tacttttttctgggtttttgttgaaattttcttccaagaaatcatctttttccttttataatttgttattttagctcattttgctatgatggagtgcagacattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacaatgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtcttttcgccagcgagtgcaatggtgacaaaaaggggctaccatgtcctgattctgcaatatcagaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctattacgggcttgttgctgttgcttctctgaagacctcttcaaggttttggcgtatttctgtattctttattgtcaacatattgtttgaactccggattttcttctaccacgttaccactgattaacaatcaaacaagaaactcatttgagcctcctcttgtaattcttgatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64708" stop="67734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65007" g_stop="65177" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="227" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67419" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="709" r_length="482" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E559661" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E559661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65007" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAA-ATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATC-AACAAGAAACTCCTCCTCTT</genome_strand>
        <mrna_strand>TACTTTTT-TCTGGGTTTTTGTTGAAATTTTCTTCCAAGAAATCATCTTTTTCCTTTTATAATTTGTTATTTTAGCTCATTTTGCTATGATGGAGTGCAGACATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTCGCCAGCGAGTGCAATGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCAATATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTATTACGGGCTTGTTGCTGTTGCTTCTCTGAAGACCTCTTCAAGGTTTTGGCGTA-TTTCTGTATTCTTTATTGTCAACATATTGTTTGAACTCCGGATTTTCTTCTACCACGTTACCACTGATTAACAATCAAACAAGAAACTCAT-TTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352054" ref_strand="+" ref_description="SGN-E352054 [cTOS-13-H19]">
      <seq>ttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64715" stop="67697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65015" g_stop="65177" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="220" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67397" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="680" r_length="460" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E352054" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65015" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGA</genome_strand>
        <mrna_strand>TTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356197" ref_strand="+" ref_description="SGN-E356197 [cTOS-20-D11]">
      <seq>ttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttggtgcttctctgaagatctcttcaagggtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64715" stop="67618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65015" g_stop="65177" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="220" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67318" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="601" r_length="381" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E356197" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65015" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTG</genome_strand>
        <mrna_strand>TTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGGTGCTTCTCTGAAGATCTCTTCAAGGGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354352" ref_strand="+" ref_description="SGN-E354352 [cTOS-17-G9]">
      <seq>ttctggttctttgttgaaatcttcttccaagaactcatcttttagcttttatattctgatattttagctcattttgctataatggggtgcagatattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtggtcactacccaatgcaaaggaccaaaatacccagccaaacaatgttgtgaagcccttgcggagtttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64715" stop="67597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65015" g_stop="65177" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="220" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67297" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="580" r_length="360" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E354352" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354352" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65015" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCT</genome_strand>
        <mrna_strand>TTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E617014" ref_strand="+" ref_description="SGN-E617014 [90487]">
      <seq>tcattttgctattatggagtgcagacattgtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcagaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacaatgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtctttttgccagcgagtgcaatggtgacaaaaaggggctaccatgtcctgattctgcatcatcagaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctattatgggcttcttgttgttgcttctctgaagacctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgttggaactccggattttcttctaccacgttacccactgattaacaatcaacaagaaactcatttgagcctcctcttgtaattcttgatatattacaacagcagttactgctgatacttgtgtattgaaaatgactctccttggtaacccgaggatctgttaaatattatttcattttgttgtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64783" stop="67824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65083" g_stop="65177" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="152" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67534" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="760" r_length="608" r_score="0.896"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E617014" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E617014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65083" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTA-CCACTGATTAACGATCAACAAGAAA--C---T---CCTCCTCTTGTAATTCTTGATATATTACAACAGCA--AACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCAT</genome_strand>
        <mrna_strand>TCATTTTGCTATTATGGAGTGCAGACATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAGAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTTGCCAGCGAGTGCAATGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCATCATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTATTATGGGCTTCTTGTTGTTGCTTCTCTGAAGACCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTGGAACTCCGGATTTTCTTCTACCACGTTACCCACTGATTAACAATCAACAAGAAACTCATTTGAGCCTCCTCTTGTAATTCTTGATATATTACAACAGCAGTTACTGCTGATACTTGTGTATTGAAAATGACTCTCCTTGGTAACCCGAGGATCTGTTAAATATTATTTCATTTTGTTGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434711" ref_strand="-" ref_description="SGN-E434711 [STM-60-G24]">
      <seq>gtttttcttgtatttttctacngttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacagtgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtctttttgccagcgagtgcactggtgacaaaaaggggctaccatgtcctgattctgcatcatcagaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgtaacagctattatgggtttgttgttgttgcttctctgaagacctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccacgttaccactgattaacaatcaacaagaaactcatttgagcctcctcttgtaattcttgatatattacaacagcagttactgctgatacttgtgtattgaaaatgactctccttggtaacccgaggatctgtaaaaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64812" stop="67806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65112" g_stop="65177" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="123" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67511" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="707" r_length="584" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E434711" ref_strand="-">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434711" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65112" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAA--C---T---CCTCCTCTTGTAATTCTTGATATATTACAACAGCA--AACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATT</genome_strand>
        <mrna_strand>GTTTTTCTTGTATTTTTCTACNGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAGTGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTTGCCAGCGAGTGCACTGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCATCATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGTAACAGCTATTATGGGTTTGTTGTTGTTGCTTCTCTGAAGACCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCACGTTACCACTGATTAACAATCAACAAGAAACTCATTTGAGCCTCCTCTTGTAATTCTTGATATATTACAACAGCAGTTACTGCTGATACTTGTGTATTGAAAATGACTCTCCTTGGTAACCCGAGGATCTGTAAAAAAAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434710" ref_strand="+" ref_description="SGN-E434710 [STM-60-G24]">
      <seq>gtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacagtgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtctttttgccagcgagtgcactggtgacaaaaaggggctaccatgtcctgattctgcatcatcagaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgtaacagctattatgggtttgttgttgttgcttctctgaagacctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccacgttaccactgattaacaatcaacaagaaactcatttgagcctcctcttgtaattcttgatatattacaacagcagttactgctgatacttgtgtattgaaaatgactctccttggtaacccgaggatctgttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64812" stop="67806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65112" g_stop="65177" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="123" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67510" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="706" r_length="583" r_score="0.899"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E434710" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65112" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAA--C---T---CCTCCTCTTGTAATTCTTGATATATTACAACAGCA--AACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTAT</genome_strand>
        <mrna_strand>GTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAGTGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTTGCCAGCGAGTGCACTGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCATCATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGTAACAGCTATTATGGGTTTGTTGTTGTTGCTTCTCTGAAGACCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCACGTTACCACTGATTAACAATCAACAAGAAACTCATTTGAGCCTCCTCTTGTAATTCTTGATATATTACAACAGCAGTTACTGCTGATACTTGTGTATTGAAAATGACTCTCCTTGGTAACCCGAGGATCTGTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409741" ref_strand="+" ref_description="SGN-E409741 [PPI-14-P2]">
      <seq>gtttttcttgtatttttctactgttttctttcttcatttcagcttcagcttcagcttatttatcagatgggatttttgttaatgaaggtttaactgggaggaatctacttcaagccaagaaaccttgtcctatcagcttcgagtttcaaaactacacagtcgtcactacccaatgcagaggaccgcaatacccagccaaacagtgttgtgaagcccttgcgcagtttgcttgtccctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtctttttgccagcgagtgcactggtgacaaaaaggggctaccatgtcctgattctgcatcatcagaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgtaacagctattatgggttttgtgttgttgcttctctgaagacctcttcaggttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64812" stop="67618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65112" g_stop="65177" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="123" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67318" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="503" r_length="380" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E409741" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E409741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65112" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTG</genome_strand>
        <mrna_strand>GTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG.....................................................................................ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATACCCAGCCAAACAGTGTTGTGAAGCCCTTGCGCAGTTTGCTTGTCCCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTTGCCAGCGAGTGCACTGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCATCATCAGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGTAACAGCTATTATGGGTTTTGTGTTGTTGCTTCTCTGAAGACCTCTTC-AGGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274917" ref_strand="+" ref_description="SGN-E274917 [cLEN-16-D13]">
      <seq>ttctactgctttgtttcttcatctcagctgcagctccaacttatttatcagatgggatttttgtgaatgaaggtttaactgggaggaatctacttcaagccaagaaacctgggcctatcagcttcgagtgtcaaaactacacagaggtcactacccaccgcaaaggaccaaaatacccacccaaacaatgttgtgaaccccttgcggagttcgcgtgtccctattcaaaattcccgaatgattcgacaactgattgcgcctctaccatgttcagctacattaaccttcacgggaagtacccacccggccttttcgccagtgagcgcaataaagacaaaaatgggctaccatgtgctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgcatactatcaccgatcctgatgattgcaacagctcttacaggcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="64950" stop="67582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65127" g_stop="65177" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.882"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85">
            <donor d_prob="0.964" d_score="0.88"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65263" g_stop="65319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="108" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="0.98"/>
            <acceptor a_prob="0.918" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66938" g_stop="67282" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="453" r_length="345" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E274917" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65127" e_stop="65177"/>
          <exon e_start="65263" e_stop="65319"/>
          <exon e_start="66938" e_stop="67282"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAGGTTTGTGTTTTTTGTACTGTTTTTGTTTTTCCCAATTTGGTTTCTGCTATGAATGTTCTTACATATTTTATATTTTGTTATGCAGATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCT</genome_strand>
        <mrna_strand>TTCTACTGCTTTGTTTCTTCATCTCAGCTGCAGCTCCAACTTATTTATCAG.....................................................................................ATGGGATTTTTGTGAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCCTATCAGCTTCGAGTGTCAAAACTACACAGAGGTCACTACCCACCGCAAAGGACCAAAATACCCACCCAAACAATGTTGTGAACCCCTTGCGGAGTTCGCGTGTCCCTATTCAAAATTCCCGAATGATTCGACAACTGATTGCGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCCGGCCTTTTCGCCAGTGAGCGCAATAAAGACAAAAATGGGCTACCATGTGCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGCATACTATCACCGATCCTGATGATTGCAACAGCTCTTACAGGCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E557557" ref_strand="+" ref_description="SGN-E557557 [16375]">
      <seq>tctacttcaagccaagaaacttgtcctatcagcttcgagtttcaaaactacacagtcgtcactacccaatgcagaggaccgcaataccagccaaacaatgttgtgaagcccttggcacagtttgcttgtcctattcagactatgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaatcttcacgggaagtacccacccggtctttttgccagcgagtgcactgggtgacaaaaaggggctaccatgtcctgattctgcatcatcagaatctgccagtgctagtaatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctattatgggcttcttgttgttgctttctctgaagacctcttcaaggttttggcgtaatttctgtattctttattgtccaatattgtttgaactcccgattttcttctaacacgttaccactgattaacaatcaacaagaaactcattttgagcctcctcttgtaattcctgatatattacaacagcagttactgctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="65000" stop="67745"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65300" g_stop="65319" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618">
            <donor d_prob="0.899" d_score="0.00"/>
            <acceptor a_prob="0.918" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66938" g_stop="67413" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="496" r_length="477" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E557557" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E557557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65300" e_stop="65319"/>
          <exon e_start="66938" e_stop="67413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACTTCAAGCCAAGAAACGTAAGCTCTTGATCATCATTTTTGGTTTTGTTTGGTGGTCTTTGGAGCTAGATTTGTGTATTTTGTTAAGTTCTACTGTAGCTGAATGGTTTGACTAAAGATCTGTGAAGTGGGGTTTGTTCTTTAGGTATATATCTTGTTGAAATTGAAACTAAATTTCTGAAATAGCTGTTGGGTGATCTTGTAATTCAGCCTCTTTTCTTCTGTTTCTGTTTTCTGGGATCTGGATGTGTCATTTTGCCTTACGTTTGAGGTGAGGTGAGAGGAACCCTTTTGCAGTTGAAGATGGCGCTTTTTTGGTTTATCTTTATGCATTATCATTGTTCTTGTTTTTCATTATTTTTCGATTTCTGTTGTTACATGTTGTTCCTTTAGCCTCGATTATCTTATTCTCTTGATGTTGTTTCTACTGCCTCTTTTTTTATCATTCATTGAGTCTGAGGGTGTAGCCGGAAACAGCCTCTCTACCTTTCTCAAGTTAGGGGTAGAGGTAAGGTTTGTGTACGCTCTATCCTCACAAACCAACCTCGCTTGTGGGATTACAGTGAATTATTTGTTGCTGTTTTCTTTGCTATTATGTCTTGGTTATGTTCTTACAGTCAGGTTATGTTTTAACATGCTTGAGTGTCTTTCTAATAAGGAAGAAGTTTTTAAGAAACATGCACTAGTTGTGTTATCCTGTAATTATGGTTAGTAGGTTATTGCAAATACAAGGACAAAACCAAACTTTTTTAGGATTATGAAATGTTTAAATTGAGCAACTTGTGACATTTCCATATAATTTTGTAGTTGATAGCATGTGATAGTTTTGCCAAGTGATTTTTAGTGCTCTGTGCAAAGTTCAGTAAGCAGTACGATGTGCTGCAATCTGCTGCGTATTTCGCATTCTGAAGTTCTGCATAGATTTGGTAGAGATGTTTCTTCCAGTTTGTTTTGTTGATACTGTGGCCAGGAGTGTCTGTTTGATGATACTCAGCTACGTACGAAGCTATAGGATAGTGCTTGATATGAATGATAACTTTGTTTTCTGGGCCGTGGATCTTCTTGTATGCTTTGTTCATCCACTGATGGAAAATGGAAAGGAATGGTATAAATGTGAAGTACATTATCGAGTTTTGCAGCTTAGGTGGGTATTTAACTACTGTGTGATTGAATTGGTATCTAGGACTACCTATTATATGAGTTGAAATATGCAAACAGAGCTCGTTGATGAGGATAATGTTTAAGATGGTACTGGATATTTTTAAACTTGAGATGAGTCAAATCAAGGAAAACACGAAAGACCATAGTTCATCAAGTTCTGCTTATTCTCAGAATTCATATGTTGCCACATGTGTGGTGACTTAAAGCAATTTAATCTTCTTTTCCTCCATCAAGCAATTTGAAAACATTGATGTACCTAAAACAGGGAAGTTTTCGTTAATTAGGGGAATTTGACACCGAGTTGCTTGATGACTTGTTTATTTGCTATTGTGAGATGCACATAGTTGTTGCATGTTTGTAACTCACTGATGATGATCACTTTACAATGACCTAGAAGATTTCTGTTTGCTTAAATTTTTTACCCTGAGAGCTTGAAATGCTTGCTGAAGAATGCTTTGCTTCAATATTTATGCAGCTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTT-GCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAAT-AAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTT-CTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCT</genome_strand>
        <mrna_strand>TCTACTTCAAGCCAAGAAA-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTCGTCACTACCCAATGCAGAGGACCGCAATA-CCAGCCAAACAATGTTGTGAAGCCCTTGGCACAGTTTGCTTGT-CCTATTCAGACTATGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAATCTTCACGGGAAGTACCCACCCGGTCTTTTTGCCAGCGAGTGCACTGGGTGACAAAAAGGGGCTACCATGTCCTGATTCTGCATCATCAGAATCTGCCAGTGCTAGTAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTATTATGGGCTTCTTGTTGTTGCTTTCTCTGAAGACCTCTTCAAGGTTTTGGCGTAATTTCTGTATTCTTTATTGTCCAATATTGTTTGAACTCCCGATTTTCTTCTAACACGTTACCACTGATTAACAATCAACAAGAAACTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290468" ref_strand="+" ref_description="SGN-E290468 [cLES-20-L8]">
      <seq>tttttttttttaacagatccttggtttagcaaggagagtcattttcaatacacaagtatcaacagtttgctgttgtaatatatcaagaattacaagaggaggagtttcttgttgatcgttaatcagtggtaacatggtagaagaaaatccggagttcaaacaatatttgacaataaagaatacagaaactacgccaaaaccttgaagagatcttcagagaagcaacaagaagaagcccgtaagagctgttgcaatcatcaggatcggtgatagtctacagctcatatgactattattagcactggcagattcggatgatgcagaatcaggacatggtagcccatttttgtctttattgcactcactggcgaaaagaccaggtgggtacttcccgtgaaggttaatgtagctgaacatggtagaggcacaatcagttgtcaaatcattcacgaattctgaatagggacacgcaaactccgcaagggcttcacaacattgtttggctgggtattttggtcctttgcattgggtagtgaccactgtgtagttttgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="67806" stop="66657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67512" g_stop="66957" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E290468" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67512" e_stop="66957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAATATTTAACAGATCCTTGGTTTAGCAAGGAGAGTCATTTTCAATACACAAGTATCAACAGTTTGCTGTTGTAATATATCAAGAATTACAAGAGGAGGAGTTTCTTGTTGATCGTTAATCAGTGGTAACATGGTAGAAGAAAATCCGGAGTTCAAACAATATTTGACAATAAAGAATACAGAAACTACGCCAAAACCTTGAAGAGATCTTCAGAGAAGCAACAAGAAGAAGCCCGTAAGAGCTGTTGCAATCATCAGGATCGGTGATAGTCTACAGCTCATATGACTATTATTAGCACTGGCAGATTCGGATGATGCAGAATCAGGACATGGTAGCCCATTTTTGTCTTTATTGCACTCACTGGCGAAAAGACCAGGTGGGTACTTCCCGTGAAGGTTAATGTAGCTGAACATGGTAGAGGCACAATCAGTTGTCAAATCATTCACGAATTCTGAATAGGGACACGCAAACTCCGCAAGGGCTTCACAACATTGTTTGGCTGGGTATTTTGGTCCTTTGCATTGGGTAGTGACCACTGTGTAGTTTTGAAAC</genome_strand>
        <mrna_strand>TTTTTTTTTTTAACAGATCCTTGGTTTAGCAAGGAGAGTCATTTTCAATACACAAGTATCAACAGTTTGCTGTTGTAATATATCAAGAATTACAAGAGGAGGAGTTTCTTGTTGATCGTTAATCAGTGGTAACATGGTAGAAGAAAATCCGGAGTTCAAACAATATTTGACAATAAAGAATACAGAAACTACGCCAAAACCTTGAAGAGATCTTCAGAGAAGCAACAAGAAGAAGCCCGTAAGAGCTGTTGCAATCATCAGGATCGGTGATAGTCTACAGCTCATATGACTATTATTAGCACTGGCAGATTCGGATGATGCAGAATCAGGACATGGTAGCCCATTTTTGTCTTTATTGCACTCACTGGCGAAAAGACCAGGTGGGTACTTCCCGTGAAGGTTAATGTAGCTGAACATGGTAGAGGCACAATCAGTTGTCAAATCATTCACGAATTCTGAATAGGGACACGCAAACTCCGCAAGGGCTTCACAACATTGTTTGGCTGGGTATTTTGGTCCTTTGCATTGGGTAGTGACCACTGTGTAGTTTTGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353036" ref_strand="+" ref_description="SGN-E353036 [cTOS-14-B23]">
      <seq>tttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatatattacaacagcaaactgttgatacttgtgtattgaaaatgactctccttgctaaaccaaggatctgttaaatattatttcactttgttggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66739" stop="67824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67039" g_stop="67533" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E353036" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67039" e_stop="67533"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCA</genome_strand>
        <mrna_strand>TTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354858" ref_strand="+" ref_description="SGN-E354858 [cTOS-19-B6]">
      <seq>tttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatatattacaacagcaaactgttgatacttgtgtattgaaaatgactctccttgctaaaccaaggatctgttaaatattatttcactttgttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66739" stop="67824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67039" g_stop="67533" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E354858" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67039" e_stop="67533"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCA</genome_strand>
        <mrna_strand>TTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357855" ref_strand="+" ref_description="SGN-E357855 [cTOS-24-M24]">
      <seq>tttgcgtgtccctattcagaattcgtgaatgatttgacaactgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatatattacaacagcaaactgttgatacttgtgtattgaaaatgactctccttgctaaaccaaggatctgttaaatattatttcactttgttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66739" stop="67824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67039" g_stop="67533" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E357855" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67039" e_stop="67533"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCA</genome_strand>
        <mrna_strand>TTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236206" ref_strand="+" ref_description="SGN-E236206 [cLED-20-D5]">
      <seq>ctgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatattttacaacagcaaactgttgatacttgtgtattgaaaatgactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66779" stop="67777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67079" g_stop="67477" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E236206" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67079" e_stop="67477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTC</genome_strand>
        <mrna_strand>CTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATTTTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E233315" ref_strand="+" ref_description="SGN-E233315 [cLED-9-C9]">
      <seq>ctgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatatattacaacagcaaactgttgatacttgtgtattgaaaatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66779" stop="67775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67079" g_stop="67475" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E233315" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67079" e_stop="67475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGAC</genome_strand>
        <mrna_strand>CTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231285" ref_strand="+" ref_description="SGN-E231285 [cLED-5-J10]">
      <seq>ctgattgtgcctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatatattacaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66779" stop="67742"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67079" g_stop="67442" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E231285" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67079" e_stop="67442"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACA</genome_strand>
        <mrna_strand>CTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304781" ref_strand="+" ref_description="SGN-E304781 [cLEX-10-E5]">
      <seq>ctctaccatgttcagctacattaaccttcacgggaagtacccacctggtcttttcgccagtgagtgcaataaagacaaaaatgggctaccatgtcctgattctgcatcatccgaatctgccagtgctaataatagtcatatgagctgtagactatcaccgatcctgatgattgcaacagctcttacgggcttcttcttgttgcttctctgaagatctcttcaaggttttggcgtagtttctgtattctttattgtcaaatattgtttgaactccggattttcttctaccatgttaccactgattaacgatcaacaagaaactcctcctcttgtaattcttgatatattacaacagcaaactgttgatacttgtgtattgaaaatgactctccttgctaaaccaaggatctgttaaatattatttcactttgttgtattttgagcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="66789" stop="67846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67089" g_stop="67546" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E304781" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E304781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67089" e_stop="67546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCATGAACGATAGTAA</genome_strand>
        <mrna_strand>CTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223960" ref_strand="+" ref_description="SGN-E223960 [cLEL-19-L17](-)">
      <seq>gctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaagtgtaagactaatttatgtcgttcagtcatgcggatctgctaagcatatgatgtacaaaatcttagattattgaggtagttccaaatggagtgaatatctgtaagttggacttctagacttataataaaggagcacctttttcaggttatgtgttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="70508" stop="69519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70195" g_stop="69819" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="390" r_length="377" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="391" polyA_stop="401"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E223960" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70195" e_stop="69819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAATACAA</genome_strand>
        <mrna_strand>TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223825" ref_strand="+" ref_description="SGN-E223825 [cLEL-19-L17](-)">
      <seq>tggtgtgtgataaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaagtgtaagactaatttatgtcgttcagtcatgcggatctgctaagcatatgatgtacaaaatcttagattattgaggtagttccaaatggagtgaatatctgtaagttggacttctagacttataataaaggagcacctttttcaggttatgtgttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="70474" stop="69519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70174" g_stop="69819" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="357" polyA_stop="367"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E223825" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70174" e_stop="69819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAATACAA</genome_strand>
        <mrna_strand>TGGTGTGTGATAAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325798" ref_strand="-" ref_description="SGN-E325798 [cTOC-12-C24]">
      <seq>atggttgatgatagctggtacaaaacagtagttttggttggggaaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaagtgtaagactaatttatgtcgttcagtcatgcggatctgctaagcatatgatgtacaaaatcttagattattgaggtagttccaaatggagtgaatatctgtaagttggactcctacccttataataaaggagcacctttttcaggttatgtgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71264" stop="69526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70964" g_stop="70895" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="189" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70195" g_stop="69826" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="559" r_length="370" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E325798" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325798" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70964" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="69826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTT</genome_strand>
        <mrna_strand>ATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGTTGGGGAAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTCCTACCCTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374026" ref_strand="+" ref_description="SGN-E374026 [TUS-33-E23]">
      <seq>tgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaagtgtaagactaatttatgtcgttcagtcatgcggatctgctaagcatatgatgtacaaaatcttagattattgaggtagttccaaatggagtgaatatctgtaagttggacttctagacttataataaaggagcacctttttcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71836" stop="69537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71536" g_stop="71469" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="202" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="321" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70195" g_stop="69830" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="687" r_length="366" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E374026" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71536" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="69830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATG</genome_strand>
        <mrna_strand>TGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374025" ref_strand="+" ref_description="SGN-E374025 [TUS-33-E23](-)">
      <seq>ctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaagtgtaagactaatttatgtcgttcagtcatgcggatctgctaagcatatgatgtacaaaatcttagattattgaggtagttccaaatggagtgaatatctgtaagttggacttctagacttataataaaggagcacctttttcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71834" stop="69537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71534" g_stop="71469" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="200" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="319" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70195" g_stop="69836" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="679" r_length="360" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E374025" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71534" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="69836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAG</genome_strand>
        <mrna_strand>CTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412714" ref_strand="-" ref_description="SGN-E412714 [STM-16-P7]">
      <seq>caggatgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtggacttcttcccccatgcatgaataatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccacttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattattgggtcagtggcactacaggtggtattgccaaagatcaagagttttgatgtgcctcatggctgaagaacaactattgtatcaatgattagatcatttgttaaagatacaaatataaggctatctatacattacgtgtaagactaatgttatgtcgttcagtcatgcggatctgctaagtatataatgtacaaaatcttagattattgaggtagttccaaatggagggaatatttgtaagttggacttctacacttataataaaagagaaccttttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71279" stop="69537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70979" g_stop="70895" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="204" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70195" g_stop="69840" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="561" r_length="357" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="563" polyA_stop="574"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E412714" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412714" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70979" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="69840"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAAT-TTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTT</genome_strand>
        <mrna_strand>CAGGATGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGGACTTCTTCCCCCATGCATGAATAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCACTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTATTGGGTCAGTGGCACTACAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCATGGCTGAAGAACAACTATTGTATCAATGATTAGATCATTTGTTAAAGATACAAATATAAGGCTATCTATACATTACGTGTAAGACTAATGTTATGTCGTTCAGTCATGCGGATCTGCTAAGTATATAATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGGGAATATTTGTAAGTTGGACTTCTACACTTATAATAAAAGAGAACCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319347" ref_strand="+" ref_description="SGN-E319347 [cTOB-15-I17]">
      <seq>gtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaagtgtaagactaatttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71317" stop="69663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71017" g_stop="70895" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="242" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70195" g_stop="69963" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="475" r_length="233" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E319347" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71017" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="69963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATG</genome_strand>
        <mrna_strand>GTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296022" ref_strand="+" ref_description="SGN-E296022 [cLET-27-D9]">
      <seq>tgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactgcaggtggtattgccaaagatcaagagttttgatgtgcctcgtggctgaagatcaactattgcatcaatgattagatcatttgttaaagatataaatataaggctatttatacatcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71836" stop="69681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71536" g_stop="71469" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="202" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="321" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70195" g_stop="69981" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="536" r_length="215" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E296022" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71536" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="69981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAA</genome_strand>
        <mrna_strand>TGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316721" ref_strand="+" ref_description="SGN-E316721 [cTOB-5-P2]">
      <seq>agcattgaagcttacaggattccttaaggagcagatgcaacagaagaatatttattttgggtcactttacactgtgcggactctgaaagagaacctttgttatattgcacttgattatgaagctgaactatccaaagataccaacgcatcttttcagatcgggtctgaaggttgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattacagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattactgttgcagtggcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="72706" stop="69798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72406" g_stop="72316" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71617" g_stop="71469" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="240" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="374" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="493" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70195" g_stop="70098" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="591" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E316721" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72406" e_stop="72316"/>
          <exon e_start="71617" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="70098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAGGTATCAACTTTCTGTCATAGAACATTTAGGGTGGGAAGGAAGCGGGTTTCACTTAGACATGATTCTTTGCACTATTTCTACCTTGCAAGTGAAAAGTTACTGAATCACTTCAAAAATATGCCGTGGTAACATTTTTGTTACTGGAAACCATTTCGTTGTACATAAAATTTTGAATTGCCGCGTCCCTCTACTGCCACATCTAGATACTAACAATCTTGAGAAGTGCTTGGTCAGATAATCATAGCTCCAGCACTACTGCATATGCACTAGCTGCTGATAACCTCAATAAACCATTAAATGCATATCTTAGTTGTGTGAGTTCTTTGTGACTTTCTTCTTGACTACACATTGTCGAATTACAATAATCTGTAAAGTTTGCAAAGTAATTTAAGTTCTAAGTTTTCCAGAAATTTATGGTATCTGAAGAGGAAAATGTGATGAACAAATTTAAGAGTTATTGCAGATCTTCTGCTTCACTTTTTCACTATATTTTGTTTATTTAAAAATAAAGATGTTATTAGTGTACAATTTCTCTGTTATTTTTATCTTAGTAACATAAATCATGTTAGATTCAGTTAGTTTTGATCCTGTGACAAACATAGACTTGAAAAGCCTAGCTGCATGAGAGTTACGGTTACTTTTAATTTCTTAGTGATGTTTTCGAGTATTTTCTGAGGTCCATTTGGTCCGTATTGCAGAACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTG</genome_strand>
        <mrna_strand>AGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTACAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601056" ref_strand="+" ref_description="SGN-E601056 [54082]">
      <seq>aaattataggccgttttagctttatttgctgcaaggaaagtttcaggaatagtagtcaacattggatttaaccagacatctattgttccaattcttcacggtaaagtcatgcaccaagtaggtgtggaagttgtgggaattggagcattgaagcttacaggattccttaaggagcagatgcaacaaaagaatatttattttgggtcactttacactgtgcggacactgaaagagaacctttgttatgttgcgcttgattatgaagctgagttatccaaagataccagtgcatcttttcagatcgcatctgagggttgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttgcagaatgctgtggcgctgtgcatggagcactgccaggatgctgaattaatggttgatgatagctggtacaaaacagtagttttggctggtggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtggacttcttcccccatgcatgaataatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccacttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattattggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="73306" stop="69812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73006" g_stop="72916" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72458" g_stop="72316" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="234" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.909" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71617" g_stop="71469" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="383" r_length="149" r_score="0.940"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="517" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.830" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="636" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70195" g_stop="70110" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="722" r_length="86" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E601056" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E601056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73006" e_stop="72916"/>
          <exon e_start="72458" e_stop="72316"/>
          <exon e_start="71617" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="70110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTATAGGCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAAGTAAGTTTTTTATTCATGTACTGGACTTATGGTTCTTGTTTGACTTTATTGTATACTTGTTTTTGTAGAACTCATTCATTTTTAATTCTTTGAACTGTGAAAGTTTTTTTTTTGTTTTTTGAGTTGCTAGTAGGATATTTAGAAACTGAGTTTGTATTCTCCAGCTTTCTGAGTTAATCAGCGGTGACCAGACAACCCCTGAGATGAATCACAGATGGGTTCCAATGTTTCTTGTTAAACTAATTTCATCTTACATTTGCTTTACTCCTTTTAAATTACCTTATCAAAAAGAAAGTTTGTGCTCTCTAATTGTTTATTCTTTCTGATGATTTAATTTACTCTTAAATTTCTTCATGAACAACGTACATGGATTGCATGTTTTTATTTCTCTTCGTGTCTGCAATTTGATTGCATTGTTTCAATAATTTATGTGTAGCCACTTTTTGGTCTTTTACAGTTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAGGTATCAACTTTCTGTCATAGAACATTTAGGGTGGGAAGGAAGCGGGTTTCACTTAGACATGATTCTTTGCACTATTTCTACCTTGCAAGTGAAAAGTTACTGAATCACTTCAAAAATATGCCGTGGTAACATTTTTGTTACTGGAAACCATTTCGTTGTACATAAAATTTTGAATTGCCGCGTCCCTCTACTGCCACATCTAGATACTAACAATCTTGAGAAGTGCTTGGTCAGATAATCATAGCTCCAGCACTACTGCATATGCACTAGCTGCTGATAACCTCAATAAACCATTAAATGCATATCTTAGTTGTGTGAGTTCTTTGTGACTTTCTTCTTGACTACACATTGTCGAATTACAATAATCTGTAAAGTTTGCAAAGTAATTTAAGTTCTAAGTTTTCCAGAAATTTATGGTATCTGAAGAGGAAAATGTGATGAACAAATTTAAGAGTTATTGCAGATCTTCTGCTTCACTTTTTCACTATATTTTGTTTATTTAAAAATAAAGATGTTATTAGTGTACAATTTCTCTGTTATTTTTATCTTAGTAACATAAATCATGTTAGATTCAGTTAGTTTTGATCCTGTGACAAACATAGACTTGAAAAGCCTAGCTGCATGAGAGTTACGGTTACTTTTAATTTCTTAGTGATGTTTTCGAGTATTTTCTGAGGTCCATTTGGTCCGTATTGCAGAACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTT</genome_strand>
        <mrna_strand>AAATTATAGGCCGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGATTTAACCAGACATCTATTGTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTCACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAAAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACACTGAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTTGTTATGTTGCGCTTGATTATGAAGCTGAGTTATCCAAAGATACCAGTGCATCTTTTCAGATCGCATCTGAGGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTGCAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCAGGATGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGTGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGGACTTCTTCCCCCATGCATGAATAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCACTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300637" ref_strand="+" ref_description="SGN-E300637 [cLET-45-L3]">
      <seq>tgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaagcaatttcgtcataggtcgagacgcaagtttatgtggtgattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71836" stop="69813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71536" g_stop="71469" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="202" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="321" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70195" g_stop="70113" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="404" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E300637" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300637" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71536" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="70113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACT</genome_strand>
        <mrna_strand>TGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E282750" ref_strand="+" ref_description="SGN-E282750 [cLER-15-N22]">
      <seq>ttgtactcagggcgggtgggggcagttctagacatcgtattctcattttgagtctacactctactatggtcaactgatgatgccggtttcttgacttatatcatttagacaaagtggtgtttttgtggatgcaactggtgaaacacaactgacccccaccccccaattacctcaaaaaagaacaaggatctgtagtatggaaaattagtagatttgcggtcttgtttcaggcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggggaagtgcatgtttgcctggattagcagaaagattagagaaggaagtgtgtgaacttcttcctccatgcatgagtaatggaatcagagtacttcctcccccatatggcgtagattctgcttggtatggggctaagctgattggcaatttgagcaccttccccagttcctggtgtgtgatgaaaaaacaatttcgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71558" stop="69846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71258" g_stop="70895" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70721" g_stop="70603" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="483" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70195" g_stop="70146" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="533" r_length="50" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E282750" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71258" e_stop="70895"/>
          <exon e_start="70721" e_stop="70603"/>
          <exon e_start="70195" e_stop="70146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAATGTAAGCTACCTTGCTCAACATAATTTGTTGCAGTAGTTTTACTCTCTTACTCATGCTTATTGGCAATCTTGACTTTGACATGGTTCCTTGAATTGAAAACTTAGTTAATTCCGGTAAAAATCGTATATTAAATTTGCATTTTAAAAGGTAAGAGTTACTCTACCTGCTTAGGTGAACATGCCAATTCTTTCGATTGCCTCTTGGTTAGTTGTTTTTTTGTTCTTAAGAAGTTCTGTATGATTTGACTATGATCTCTTCTTTTGAGGGGATTGGTGTGGAAAAAATGTGTAATTATCATCAAAGTGACAATTAGCATGTACTTGATCATGAATATTTTGTTCTTGCTGTCATTGAACTTTTTATCATATACCTGATTATGATACAAATTCTTTGTCTGTTTACTACAGTTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCA</genome_strand>
        <mrna_strand>TTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAACAATTTCGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E261487" ref_strand="+" ref_description="SGN-E261487 [cLEG-57-E19]">
      <seq>tggagtttggcaacattgaatctccaatgtattctagattgagacacttcttttcaacgatatacaccaggatgcaggtgaaaacttcaacacagccgatcattgtgtccattccgatttgccattatgatgatactgaatctgataaagcagctagaacgcagttaaaagacgcgatccattctgcattatttgacatgaatgttcctgctgtttgtgctgtcaaccaggctgttttagctttatttgctgcaaggaaagtttcaggaatagtagtcaacattgggtttaaccagacatctattgttccaattctctacggtaaagtcatgcaccaagtaggtgtggaagttgtgggaattggagcattgaagcttacaggattccttaaggagcagatgcaacagaagaatatttattttgggtcactttacactgtgcggactctgaaagagaacctttgttatattgcacttgattatgaagctgaactatccaaagataccaacgcatcttttcagatcgggtctgaaggttgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttgggctggggggaagtgcatgtttgcctggattagcagaaagattagagaagggagtgtgtgaacttcttccctcatgcatgagtaatggaatcagagtacttcctcccccatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="75249" stop="70344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75112" g_stop="75111" g_length="2"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2" r_length="2" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="0.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74948" g_stop="74881" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="3" r_stop="70" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74320" g_stop="74259" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="132" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73931" g_stop="73834" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="230" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73833" i_stop="72998" i_length="836">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72997" g_stop="72916" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="312" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72458" g_stop="72316" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="455" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71617" g_stop="71469" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="604" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="71028" g_stop="70895" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="740" r_length="136" r_score="0.970"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173">
            <donor d_prob="0.986" d_score="0.92"/>
            <acceptor a_prob="0.830" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="70721" g_stop="70644" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="741" r_stop="818" r_length="78" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E261487" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>816</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261487" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75112" e_stop="75111"/>
          <exon e_start="74948" e_stop="74881"/>
          <exon e_start="74320" e_stop="74259"/>
          <exon e_start="73931" e_stop="73834"/>
          <exon e_start="72997" e_stop="72916"/>
          <exon e_start="72458" e_stop="72316"/>
          <exon e_start="71617" e_stop="71469"/>
          <exon e_start="71028" e_stop="70895"/>
          <exon e_start="70721" e_stop="70644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAGGTTTGTGTTCCGTTCATTTTTGGTGTCATTTTACATTGGTCCCATATGACAACATCCACCTAAACCAACATCCATTGTTGAGCAATCTAAACAGGTTTTTGGTTCTCAAACATAATTTGATTTTCATAAAATGCTTTTTAACACCATATAACAGGCCTCTACGATATTTTTTACATTATTAATTGATTGTAATACGGACATTTGGTTGGCAAAGAAGAATCTGCATCAAAGTTTTATCTATGAAAGGACTCTCTGTATCATTATGTTGTCAATGTGGCACATATCCTGATTGTTTATCATATAATTCACTAATAAGATTTCCTCTATTCATATAATAAATCACCAGTTTTACCCACTTAAGAGAGCAAAAGGTATAAAGGGCTGGAATCACAATGACTTCCAGAATTTGACTAAAACACCTCGCATCTTTTTTAGAGTACTACCGTATAGCTCCCTACAAACCAGAACTAGAAGATAAGATATGAGCTTGTTCCTTAGACCCAAGGTTGCTGGAATCCTTTTATAAATTTCTCTCTTCTGCTGTTATGGATTCTTTGCAGGATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATGGTCAGTTTCTATTTGGGCGTTGCTGAAAATCCAGTCAAATTTCTGTAAATATAACGTATCAACGACTCAATTTGTTGTTTAGAGGGCAAATATTATTTCACAATATATGCATGTGTCCATTTTTACTTGATGAATCAGCTCATGCAACTCTATTTTTGAACATTCTTCCATTTGACTTTTGAGCAAGAGGGTAAGGTGCTAAAAGGTTTGAATAGTTATCTCACTCAATTAAATCTTCAACTACTAAGAAGTGAGCATAGTAAGATCTTTTCAGTGCACCAAACCAAGGCCTTCCTTTTTCTTTCTAACTTCTCTTTACCTATACAGATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGTAGTACTTATTCATTTCCTTCAACTTATGTTGGATTCCCGGAGGTGATTAAAGTTGTTAGTTTTGATAATCTTGGTTGTTCTTTTAAAAGTTCTAAGCTCGTAGCAAAACTTTGTTAGATAACAATCTTGGTTGTACTCTTAGAAGTTCTAAGCTCATAGAAGAACTTTGTTAGATTGAGGAAGAAAAAACATTTATGTCATTGTTGAGCGACATTTATGAACATGTTACATATAAAGCAGAATCTGTCCTTTCATAAGCTAGTGTACATCTACAGATAAGCTTTTCTTTCACAGTTATCGTGTGCCTTTCCTTAGTCAGGCATTCACTTGCTTGTTGTTGTGGCATGTCCTGGTCCTTAGGTTTATTGGATTTTATCTTCTTGCCTTAGCATTGGGCCACTTAGGGCTGCTACCACCAATTTAATACATACCCATGTACCCTCATCCTAATATATTTGACTTCTTTTGTTAATTACAGTAGTTTTCCATCCCTGAAAATGTTAATTAACATAAAATAACAGTACATATTTCTCTTATTTAATGGTCATGGACTGTTTTCAGTCAAATAGCCCCACTTCTCACTTTCCACTAATAATATCTTAAACATATTTGACTAACTAATGAAGTACTTGATGCTTTATACTGTTAATGGCAAAAACTAAACATTAATAACATGGGGAGAGAAAATGATCAAAATGTCACTAACTTGGCAAACTTTTCCTGTTCTCTTTCTAAGATTGTATTATACATTACCACGATTCTTCCAAAGTTTTAGACATAATCTGATTTTGGATTTATAATAGTATTATGATGTCTTTCTTTCAAAAACTATAGGCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAAGTAAGTTTTTTATTCATGTACTGGACTTATGGTTCTTGTTTGACTTTATTGTATACTTGTTTTTGTAGAACTCATTCATTTTTAATTCTTTGAACTGTGAAAGTTTTTTTTTTGTTTTTTGAGTTGCTAGTAGGATATTTAGAAACTGAGTTTGTATTCTCCAGCTTTCTGAGTTAATCAGCGGTGACCAGACAACCCCTGAGATGAATCACAGATGGGTTCCAATGTTTCTTGTTAAACTAATTTCATCTTACATTTGCTTTACTCCTTTTAAATTACCTTATCAAAAAGAAAGTTTGTGCTCTCTAATTGTTTATTCTTTCTGATGATTTAATTTACTCTTAAATTTCTTCATGAACAACGTACATGGATTGCATGTTTTTATTTCTCTTCGTGTCTGCAATTTGATTGCATTGTTTCAATAATTTATGTGTAGCCACTTTTTGGTCTTTTACAGTTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAGGTATCAACTTTCTGTCATAGAACATTTAGGGTGGGAAGGAAGCGGGTTTCACTTAGACATGATTCTTTGCACTATTTCTACCTTGCAAGTGAAAAGTTACTGAATCACTTCAAAAATATGCCGTGGTAACATTTTTGTTACTGGAAACCATTTCGTTGTACATAAAATTTTGAATTGCCGCGTCCCTCTACTGCCACATCTAGATACTAACAATCTTGAGAAGTGCTTGGTCAGATAATCATAGCTCCAGCACTACTGCATATGCACTAGCTGCTGATAACCTCAATAAACCATTAAATGCATATCTTAGTTGTGTGAGTTCTTTGTGACTTTCTTCTTGACTACACATTGTCGAATTACAATAATCTGTAAAGTTTGCAAAGTAATTTAAGTTCTAAGTTTTCCAGAAATTTATGGTATCTGAAGAGGAAAATGTGATGAACAAATTTAAGAGTTATTGCAGATCTTCTGCTTCACTTTTTCACTATATTTTGTTTATTTAAAAATAAAGATGTTATTAGTGTACAATTTCTCTGTTATTTTTATCTTAGTAACATAAATCATGTTAGATTCAGTTAGTTTTGATCCTGTGACAAACATAGACTTGAAAAGCCTAGCTGCATGAGAGTTACGGTTACTTTTAATTTCTTAGTGATGTTTTCGAGTATTTTCTGAGGTCCATTTGGTCCGTATTGCAGAACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTT-GGCT-GGGGGAAGTGCATGTTTGCCTGGATTAGCAGGTGAATTGCAACTGATGCTCTTTTTCCCTAGATAATGTATCTGATGGAATCATGTGTTTGTACATGTTCTTCTAATTTAGGAAAGTAAAGATGAGAAAGTGTTAATAGACGAAATAAAGAAGAAATGCTATCTTCAAGGGAAGTACTGATTTTTTTTATTATGAACATTGCAGAAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATG</genome_strand>
        <mrna_strand>TG..................................................................................................................................................................GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG.......................................................................................................................................................................................................................................................................................................................................ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGGCTGGGGGGAAGTGCATGTTTGCCTGGATTAGCAG.............................................................................................................................................................................AAAGATTAGAGAAGGGAGTGTGTGAACTTCTTCCCTCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253185" ref_strand="+" ref_description="SGN-E253185 [cLEG-26-M12]">
      <seq>gcgaatggagagacagatttgtactcagggcgggtgggggcagttctagacatcgtattctcattttgagtctacactctactatggtcaactgatgatgccggtttcttgacttatatcatttagacaaagtggtgtttttgtggatgcaactggtgaaacacaactgacccccaccccccaattacctcaaaaaagaacaaggatctgtagtatggaaaattagtagatttgcggtcttgtttcaagcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctggtacaaaacagtagttttggctgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="71576" stop="70622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71276" g_stop="70922" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E253185" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71276" e_stop="70922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGG</genome_strand>
        <mrna_strand>GCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAAGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728015" ref_strand="+" ref_description="SGN-E728015 [LA16BG04]">
      <seq>tgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattattattgatggtgggtctggctattgcaaatttggttggagtaagtatagtgctccgtcagggagatcagcgacatttttggagtttggcaacattgaatctccaatgtattctagattgagacacttcttttcaacgatatacaccaggatgcaggtgaaaacttcaacacagccgatcattgtgtccattccgatttgccattatgatgatactgaatctgataaagcagctagaacgcagttaaaagacgcgatccattctgcattatttgacatgaatgttcctgctgtttgtgctgtcaaccaggctgttttagctttatttgctgcaaggaaagtttcaggaatagtagtcaacattgggtttaaccagacatctattgttccaattctctacggtaaagtcatgcaccaagtaggtgtggaagttgtgggaattggagcattgaagcttacaggattccttaaggagcagatgcaacagaagaatatttattttgggtcactttacactgtgcggactctgaaagagaacctttgttatattgcacttgattatgaagctgaactatccaaagataccaacgcatcttttcagatcgggtctgaaggttgctttacactttcagaagagcgctttaaaacaggagagattttgttccagcctcgcattgcaggagtgcgtgctatgggtttacagaatgctgtggcgctgtgcatggagcactgccatgacgctgaattaatggttgatgatagctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="75712" stop="70647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75412" g_stop="75353" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75181" g_stop="75111" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="131" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74948" g_stop="74881" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="199" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74320" g_stop="74259" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="261" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="73931" g_stop="73834" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="359" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="73833" i_stop="72998" i_length="836">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72997" g_stop="72916" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="441" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="72458" g_stop="72316" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="584" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="71617" g_stop="71469" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="733" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="71028" g_stop="70947" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="734" r_stop="815" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E728015" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>815</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75412" e_stop="75353"/>
          <exon e_start="75181" e_stop="75111"/>
          <exon e_start="74948" e_stop="74881"/>
          <exon e_start="74320" e_stop="74259"/>
          <exon e_start="73931" e_stop="73834"/>
          <exon e_start="72997" e_stop="72916"/>
          <exon e_start="72458" e_stop="72316"/>
          <exon e_start="71617" e_stop="71469"/>
          <exon e_start="71028" e_stop="70947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATGGTGCGTGCCTTTCTATGTGTTACACTCGATCTTTTAGTTGGCATACTGCTCTAGTTGTTTTTTTTAACTGATTCGAGGATAAATTCTAATGAAACAGAGTATTATGTGAACAGTACAAAGAGAAATGATTTCTTTGAGCTTATTTATCTTTCTGATTTTTCTCACTAAAAGGTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAGGTTTGTGTTCCGTTCATTTTTGGTGTCATTTTACATTGGTCCCATATGACAACATCCACCTAAACCAACATCCATTGTTGAGCAATCTAAACAGGTTTTTGGTTCTCAAACATAATTTGATTTTCATAAAATGCTTTTTAACACCATATAACAGGCCTCTACGATATTTTTTACATTATTAATTGATTGTAATACGGACATTTGGTTGGCAAAGAAGAATCTGCATCAAAGTTTTATCTATGAAAGGACTCTCTGTATCATTATGTTGTCAATGTGGCACATATCCTGATTGTTTATCATATAATTCACTAATAAGATTTCCTCTATTCATATAATAAATCACCAGTTTTACCCACTTAAGAGAGCAAAAGGTATAAAGGGCTGGAATCACAATGACTTCCAGAATTTGACTAAAACACCTCGCATCTTTTTTAGAGTACTACCGTATAGCTCCCTACAAACCAGAACTAGAAGATAAGATATGAGCTTGTTCCTTAGACCCAAGGTTGCTGGAATCCTTTTATAAATTTCTCTCTTCTGCTGTTATGGATTCTTTGCAGGATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATGGTCAGTTTCTATTTGGGCGTTGCTGAAAATCCAGTCAAATTTCTGTAAATATAACGTATCAACGACTCAATTTGTTGTTTAGAGGGCAAATATTATTTCACAATATATGCATGTGTCCATTTTTACTTGATGAATCAGCTCATGCAACTCTATTTTTGAACATTCTTCCATTTGACTTTTGAGCAAGAGGGTAAGGTGCTAAAAGGTTTGAATAGTTATCTCACTCAATTAAATCTTCAACTACTAAGAAGTGAGCATAGTAAGATCTTTTCAGTGCACCAAACCAAGGCCTTCCTTTTTCTTTCTAACTTCTCTTTACCTATACAGATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGTAGTACTTATTCATTTCCTTCAACTTATGTTGGATTCCCGGAGGTGATTAAAGTTGTTAGTTTTGATAATCTTGGTTGTTCTTTTAAAAGTTCTAAGCTCGTAGCAAAACTTTGTTAGATAACAATCTTGGTTGTACTCTTAGAAGTTCTAAGCTCATAGAAGAACTTTGTTAGATTGAGGAAGAAAAAACATTTATGTCATTGTTGAGCGACATTTATGAACATGTTACATATAAAGCAGAATCTGTCCTTTCATAAGCTAGTGTACATCTACAGATAAGCTTTTCTTTCACAGTTATCGTGTGCCTTTCCTTAGTCAGGCATTCACTTGCTTGTTGTTGTGGCATGTCCTGGTCCTTAGGTTTATTGGATTTTATCTTCTTGCCTTAGCATTGGGCCACTTAGGGCTGCTACCACCAATTTAATACATACCCATGTACCCTCATCCTAATATATTTGACTTCTTTTGTTAATTACAGTAGTTTTCCATCCCTGAAAATGTTAATTAACATAAAATAACAGTACATATTTCTCTTATTTAATGGTCATGGACTGTTTTCAGTCAAATAGCCCCACTTCTCACTTTCCACTAATAATATCTTAAACATATTTGACTAACTAATGAAGTACTTGATGCTTTATACTGTTAATGGCAAAAACTAAACATTAATAACATGGGGAGAGAAAATGATCAAAATGTCACTAACTTGGCAAACTTTTCCTGTTCTCTTTCTAAGATTGTATTATACATTACCACGATTCTTCCAAAGTTTTAGACATAATCTGATTTTGGATTTATAATAGTATTATGATGTCTTTCTTTCAAAAACTATAGGCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAAGTAAGTTTTTTATTCATGTACTGGACTTATGGTTCTTGTTTGACTTTATTGTATACTTGTTTTTGTAGAACTCATTCATTTTTAATTCTTTGAACTGTGAAAGTTTTTTTTTTGTTTTTTGAGTTGCTAGTAGGATATTTAGAAACTGAGTTTGTATTCTCCAGCTTTCTGAGTTAATCAGCGGTGACCAGACAACCCCTGAGATGAATCACAGATGGGTTCCAATGTTTCTTGTTAAACTAATTTCATCTTACATTTGCTTTACTCCTTTTAAATTACCTTATCAAAAAGAAAGTTTGTGCTCTCTAATTGTTTATTCTTTCTGATGATTTAATTTACTCTTAAATTTCTTCATGAACAACGTACATGGATTGCATGTTTTTATTTCTCTTCGTGTCTGCAATTTGATTGCATTGTTTCAATAATTTATGTGTAGCCACTTTTTGGTCTTTTACAGTTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAGGTATCAACTTTCTGTCATAGAACATTTAGGGTGGGAAGGAAGCGGGTTTCACTTAGACATGATTCTTTGCACTATTTCTACCTTGCAAGTGAAAAGTTACTGAATCACTTCAAAAATATGCCGTGGTAACATTTTTGTTACTGGAAACCATTTCGTTGTACATAAAATTTTGAATTGCCGCGTCCCTCTACTGCCACATCTAGATACTAACAATCTTGAGAAGTGCTTGGTCAGATAATCATAGCTCCAGCACTACTGCATATGCACTAGCTGCTGATAACCTCAATAAACCATTAAATGCATATCTTAGTTGTGTGAGTTCTTTGTGACTTTCTTCTTGACTACACATTGTCGAATTACAATAATCTGTAAAGTTTGCAAAGTAATTTAAGTTCTAAGTTTTCCAGAAATTTATGGTATCTGAAGAGGAAAATGTGATGAACAAATTTAAGAGTTATTGCAGATCTTCTGCTTCACTTTTTCACTATATTTTGTTTATTTAAAAATAAAGATGTTATTAGTGTACAATTTCTCTGTTATTTTTATCTTAGTAACATAAATCATGTTAGATTCAGTTAGTTTTGATCCTGTGACAAACATAGACTTGAAAAGCCTAGCTGCATGAGAGTTACGGTTACTTTTAATTTCTTAGTGATGTTTTCGAGTATTTTCTGAGGTCCATTTGGTCCGTATTGCAGAACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGTGTACGTTCATATTACCTTATTTGGACTTTTAGTAAGACTATTGAACAACTCCAGTTTCAATTACTTCCCTTAGGGCATAAAGGCCTTTTAAAAAACTGGAGTAGATCCTGCACATGACAAAGTGAATTTGGACTATGTAGTCAATTGGAACCTTGTTGCATCAGGTCTTTCCTGAAACTTATTTTCTTAAATGCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGG</genome_strand>
        <mrna_strand>TGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG...........................................................................................................................................................................GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG..................................................................................................................................................................GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG.......................................................................................................................................................................................................................................................................................................................................ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449660" ref_strand="+" ref_description="SGN-E449660 [cSTS-7-K19]">
      <seq>agtaagtatagtgctccgtcagggagatcagcgacattcttggaatttggcaacattgaatctccaatgtattctagattgagacacttcttttcaacaatatacaccaggatgcaggtgaaaacttcaacacagccgatcattgtgtccattccaatttgccattatgatgatactgaatctgataaagcagctagaacgcagttaaaagacgcgatccattctgcattatttgacatgaatgttcctgctgtttgtgctgtcaaccaggccgttttagctttatttgctgcaaggaaagtttcaggaatagtagtcaacattggatttaaccagacatctattgttccaattctttacggtaaagtcatgcaccaagtaggtgtggaagttgtgggaattggagcattgaagcttacaggattccttaaggagcagatgcaacaaaagaatatttattttgggtcactttacactgtgcggacactgaaagagaacctttgttatgttgcgcttgattatgaagctgagttatccaaagataccagtgcatcttttcagatcgcatctgagggttgctttacactttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="75452" stop="71223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75152" g_stop="75111" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="0.98"/>
            <acceptor a_prob="0.541" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74948" g_stop="74881" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="110" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74320" g_stop="74259" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="172" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73931" g_stop="73834" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="270" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73833" i_stop="72998" i_length="836">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72997" g_stop="72916" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="352" r_length="82" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="72458" g_stop="72316" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="495" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.909" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71617" g_stop="71523" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="590" r_length="95" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E449660" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75152" e_stop="75111"/>
          <exon e_start="74948" e_stop="74881"/>
          <exon e_start="74320" e_stop="74259"/>
          <exon e_start="73931" e_stop="73834"/>
          <exon e_start="72997" e_stop="72916"/>
          <exon e_start="72458" e_stop="72316"/>
          <exon e_start="71617" e_stop="71523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAGGTTTGTGTTCCGTTCATTTTTGGTGTCATTTTACATTGGTCCCATATGACAACATCCACCTAAACCAACATCCATTGTTGAGCAATCTAAACAGGTTTTTGGTTCTCAAACATAATTTGATTTTCATAAAATGCTTTTTAACACCATATAACAGGCCTCTACGATATTTTTTACATTATTAATTGATTGTAATACGGACATTTGGTTGGCAAAGAAGAATCTGCATCAAAGTTTTATCTATGAAAGGACTCTCTGTATCATTATGTTGTCAATGTGGCACATATCCTGATTGTTTATCATATAATTCACTAATAAGATTTCCTCTATTCATATAATAAATCACCAGTTTTACCCACTTAAGAGAGCAAAAGGTATAAAGGGCTGGAATCACAATGACTTCCAGAATTTGACTAAAACACCTCGCATCTTTTTTAGAGTACTACCGTATAGCTCCCTACAAACCAGAACTAGAAGATAAGATATGAGCTTGTTCCTTAGACCCAAGGTTGCTGGAATCCTTTTATAAATTTCTCTCTTCTGCTGTTATGGATTCTTTGCAGGATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATGGTCAGTTTCTATTTGGGCGTTGCTGAAAATCCAGTCAAATTTCTGTAAATATAACGTATCAACGACTCAATTTGTTGTTTAGAGGGCAAATATTATTTCACAATATATGCATGTGTCCATTTTTACTTGATGAATCAGCTCATGCAACTCTATTTTTGAACATTCTTCCATTTGACTTTTGAGCAAGAGGGTAAGGTGCTAAAAGGTTTGAATAGTTATCTCACTCAATTAAATCTTCAACTACTAAGAAGTGAGCATAGTAAGATCTTTTCAGTGCACCAAACCAAGGCCTTCCTTTTTCTTTCTAACTTCTCTTTACCTATACAGATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGTAGTACTTATTCATTTCCTTCAACTTATGTTGGATTCCCGGAGGTGATTAAAGTTGTTAGTTTTGATAATCTTGGTTGTTCTTTTAAAAGTTCTAAGCTCGTAGCAAAACTTTGTTAGATAACAATCTTGGTTGTACTCTTAGAAGTTCTAAGCTCATAGAAGAACTTTGTTAGATTGAGGAAGAAAAAACATTTATGTCATTGTTGAGCGACATTTATGAACATGTTACATATAAAGCAGAATCTGTCCTTTCATAAGCTAGTGTACATCTACAGATAAGCTTTTCTTTCACAGTTATCGTGTGCCTTTCCTTAGTCAGGCATTCACTTGCTTGTTGTTGTGGCATGTCCTGGTCCTTAGGTTTATTGGATTTTATCTTCTTGCCTTAGCATTGGGCCACTTAGGGCTGCTACCACCAATTTAATACATACCCATGTACCCTCATCCTAATATATTTGACTTCTTTTGTTAATTACAGTAGTTTTCCATCCCTGAAAATGTTAATTAACATAAAATAACAGTACATATTTCTCTTATTTAATGGTCATGGACTGTTTTCAGTCAAATAGCCCCACTTCTCACTTTCCACTAATAATATCTTAAACATATTTGACTAACTAATGAAGTACTTGATGCTTTATACTGTTAATGGCAAAAACTAAACATTAATAACATGGGGAGAGAAAATGATCAAAATGTCACTAACTTGGCAAACTTTTCCTGTTCTCTTTCTAAGATTGTATTATACATTACCACGATTCTTCCAAAGTTTTAGACATAATCTGATTTTGGATTTATAATAGTATTATGATGTCTTTCTTTCAAAAACTATAGGCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAAGTAAGTTTTTTATTCATGTACTGGACTTATGGTTCTTGTTTGACTTTATTGTATACTTGTTTTTGTAGAACTCATTCATTTTTAATTCTTTGAACTGTGAAAGTTTTTTTTTTGTTTTTTGAGTTGCTAGTAGGATATTTAGAAACTGAGTTTGTATTCTCCAGCTTTCTGAGTTAATCAGCGGTGACCAGACAACCCCTGAGATGAATCACAGATGGGTTCCAATGTTTCTTGTTAAACTAATTTCATCTTACATTTGCTTTACTCCTTTTAAATTACCTTATCAAAAAGAAAGTTTGTGCTCTCTAATTGTTTATTCTTTCTGATGATTTAATTTACTCTTAAATTTCTTCATGAACAACGTACATGGATTGCATGTTTTTATTTCTCTTCGTGTCTGCAATTTGATTGCATTGTTTCAATAATTTATGTGTAGCCACTTTTTGGTCTTTTACAGTTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAGGTATCAACTTTCTGTCATAGAACATTTAGGGTGGGAAGGAAGCGGGTTTCACTTAGACATGATTCTTTGCACTATTTCTACCTTGCAAGTGAAAAGTTACTGAATCACTTCAAAAATATGCCGTGGTAACATTTTTGTTACTGGAAACCATTTCGTTGTACATAAAATTTTGAATTGCCGCGTCCCTCTACTGCCACATCTAGATACTAACAATCTTGAGAAGTGCTTGGTCAGATAATCATAGCTCCAGCACTACTGCATATGCACTAGCTGCTGATAACCTCAATAAACCATTAAATGCATATCTTAGTTGTGTGAGTTCTTTGTGACTTTCTTCTTGACTACACATTGTCGAATTACAATAATCTGTAAAGTTTGCAAAGTAATTTAAGTTCTAAGTTTTCCAGAAATTTATGGTATCTGAAGAGGAAAATGTGATGAACAAATTTAAGAGTTATTGCAGATCTTCTGCTTCACTTTTTCACTATATTTTGTTTATTTAAAAATAAAGATGTTATTAGTGTACAATTTCTCTGTTATTTTTATCTTAGTAACATAAATCATGTTAGATTCAGTTAGTTTTGATCCTGTGACAAACATAGACTTGAAAAGCCTAGCTGCATGAGAGTTACGGTTACTTTTAATTTCTTAGTGATGTTTTCGAGTATTTTCTGAGGTCCATTTGGTCCGTATTGCAGAACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTC</genome_strand>
        <mrna_strand>AGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTCTTG..................................................................................................................................................................GAATTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACAATATACACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCAATTTGCCATTATGATG.......................................................................................................................................................................................................................................................................................................................................ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGATTTAACCAGACATCTATTGTTCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAAAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACACTGAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTTTGTTATGTTGCGCTTGATTATGAAGCTGAGTTATCCAAAGATACCAGTGCATCTTTTCAGATCGCATCTGAGGGTTGCTTTACACTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556819" ref_strand="+" ref_description="SGN-E556819 [cTSD-4-L12]">
      <seq>gttgttgcgcaaggtatgggaatccgtatctactcgttccacttcgagcaattccacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtccaccggagaatttgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgagatctggacctcttaggacgtttccaaattcagtaccagaattgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattattattgatggtgggtctggctattgcaaatttggttggagtaagtatagtgctccgtcagggagatcagcgacatttttggagtttggcaacattgaatctccaatgtattctagattgagacacttcttttcaacgatatacaccaggatgcaggtgaaaacttcaacacagccgatcattgtgtccattccgatttgccattatgatgatactgaatctgataaagcagctagaacgcagttaaaagacgcgatccattctgcattatttgacatgaatgttcctgctgtttgtgctgtcaaccaggctgttttagctttatttgctgcaaggaaagtttcaggaatagtagtcaacattgggtttaaccagacatctattgttccaattctctacgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76252" stop="72614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75952" g_stop="75611" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75610" i_stop="75439" i_length="172">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75438" g_stop="75353" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="428" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75181" g_stop="75111" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="499" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74948" g_stop="74881" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="567" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74320" g_stop="74259" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="629" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73931" g_stop="73834" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="727" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73833" i_stop="72998" i_length="836">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="72997" g_stop="72916" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="809" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E556819" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E556819" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75952" e_stop="75611"/>
          <exon e_start="75438" e_stop="75353"/>
          <exon e_start="75181" e_stop="75111"/>
          <exon e_start="74948" e_stop="74881"/>
          <exon e_start="74320" e_stop="74259"/>
          <exon e_start="73931" e_stop="73834"/>
          <exon e_start="72997" e_stop="72916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATGGTGCGTGCCTTTCTATGTGTTACACTCGATCTTTTAGTTGGCATACTGCTCTAGTTGTTTTTTTTAACTGATTCGAGGATAAATTCTAATGAAACAGAGTATTATGTGAACAGTACAAAGAGAAATGATTTCTTTGAGCTTATTTATCTTTCTGATTTTTCTCACTAAAAGGTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAGGTTTGTGTTCCGTTCATTTTTGGTGTCATTTTACATTGGTCCCATATGACAACATCCACCTAAACCAACATCCATTGTTGAGCAATCTAAACAGGTTTTTGGTTCTCAAACATAATTTGATTTTCATAAAATGCTTTTTAACACCATATAACAGGCCTCTACGATATTTTTTACATTATTAATTGATTGTAATACGGACATTTGGTTGGCAAAGAAGAATCTGCATCAAAGTTTTATCTATGAAAGGACTCTCTGTATCATTATGTTGTCAATGTGGCACATATCCTGATTGTTTATCATATAATTCACTAATAAGATTTCCTCTATTCATATAATAAATCACCAGTTTTACCCACTTAAGAGAGCAAAAGGTATAAAGGGCTGGAATCACAATGACTTCCAGAATTTGACTAAAACACCTCGCATCTTTTTTAGAGTACTACCGTATAGCTCCCTACAAACCAGAACTAGAAGATAAGATATGAGCTTGTTCCTTAGACCCAAGGTTGCTGGAATCCTTTTATAAATTTCTCTCTTCTGCTGTTATGGATTCTTTGCAGGATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATGGTCAGTTTCTATTTGGGCGTTGCTGAAAATCCAGTCAAATTTCTGTAAATATAACGTATCAACGACTCAATTTGTTGTTTAGAGGGCAAATATTATTTCACAATATATGCATGTGTCCATTTTTACTTGATGAATCAGCTCATGCAACTCTATTTTTGAACATTCTTCCATTTGACTTTTGAGCAAGAGGGTAAGGTGCTAAAAGGTTTGAATAGTTATCTCACTCAATTAAATCTTCAACTACTAAGAAGTGAGCATAGTAAGATCTTTTCAGTGCACCAAACCAAGGCCTTCCTTTTTCTTTCTAACTTCTCTTTACCTATACAGATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGTAGTACTTATTCATTTCCTTCAACTTATGTTGGATTCCCGGAGGTGATTAAAGTTGTTAGTTTTGATAATCTTGGTTGTTCTTTTAAAAGTTCTAAGCTCGTAGCAAAACTTTGTTAGATAACAATCTTGGTTGTACTCTTAGAAGTTCTAAGCTCATAGAAGAACTTTGTTAGATTGAGGAAGAAAAAACATTTATGTCATTGTTGAGCGACATTTATGAACATGTTACATATAAAGCAGAATCTGTCCTTTCATAAGCTAGTGTACATCTACAGATAAGCTTTTCTTTCACAGTTATCGTGTGCCTTTCCTTAGTCAGGCATTCACTTGCTTGTTGTTGTGGCATGTCCTGGTCCTTAGGTTTATTGGATTTTATCTTCTTGCCTTAGCATTGGGCCACTTAGGGCTGCTACCACCAATTTAATACATACCCATGTACCCTCATCCTAATATATTTGACTTCTTTTGTTAATTACAGTAGTTTTCCATCCCTGAAAATGTTAATTAACATAAAATAACAGTACATATTTCTCTTATTTAATGGTCATGGACTGTTTTCAGTCAAATAGCCCCACTTCTCACTTTCCACTAATAATATCTTAAACATATTTGACTAACTAATGAAGTACTTGATGCTTTATACTGTTAATGGCAAAAACTAAACATTAATAACATGGGGAGAGAAAATGATCAAAATGTCACTAACTTGGCAAACTTTTCCTGTTCTCTTTCTAAGATTGTATTATACATTACCACGATTCTTCCAAAGTTTTAGACATAATCTGATTTTGGATTTATAATAGTATTATGATGTCTTTCTTTCAAAAACTATAGGCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA</genome_strand>
        <mrna_strand>GTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAG............................................................................................................................................................................GACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG...........................................................................................................................................................................GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG..................................................................................................................................................................GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG.......................................................................................................................................................................................................................................................................................................................................ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717637" ref_strand="+" ref_description="SGN-E717637 [FC02BC02]">
      <seq>aatcggccgaattggttgctcaaatcagtgtgtgtttgcaaacacgagtttcagtttcatgaagaatgagtgactattcagctaaaaactgttagaccctctcccatttcatgactggagccgtgccacaacaaccatggctatgttgttgcgcaaggtatgggaatccgtatctactcgttccacttcgagcaattccacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtccaccggagaatttgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgagatctggacctcttaggacgtttccaaattcagtaccagaattgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattattattgatggtgggtctggctattgcaaatttggttggagtaagtatagtgctccgtcagggagatcagcgacatttttggagtttggcaacattgaatctccaatgtattctagattgagacacttcttttcaacgatatacaccaggatgcaggtgaaaacttcaacacagccgatcattgtgtccattccgatttgccattatgatgatactgaatctgataaagcagctagaacgcagttaaaagacgcgatccattctgcattatttgacatgaatgttcctgctgtttgtgctgtcaaccaggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76388" stop="73533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76082" g_stop="75611" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="486" r_length="472" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75610" i_stop="75439" i_length="172">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75438" g_stop="75353" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="572" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75181" g_stop="75111" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="643" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74948" g_stop="74881" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="711" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74320" g_stop="74259" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="773" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73931" g_stop="73834" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="871" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E717637" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>857</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717637" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76082" e_stop="75611"/>
          <exon e_start="75438" e_stop="75353"/>
          <exon e_start="75181" e_stop="75111"/>
          <exon e_start="74948" e_stop="74881"/>
          <exon e_start="74320" e_stop="74259"/>
          <exon e_start="73931" e_stop="73834"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCTCAAATCAGTGTGTGTTTGCAAACACGAGTTTCAGTTTCATGAAGAATGAGTGACTATTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATGGTGCGTGCCTTTCTATGTGTTACACTCGATCTTTTAGTTGGCATACTGCTCTAGTTGTTTTTTTTAACTGATTCGAGGATAAATTCTAATGAAACAGAGTATTATGTGAACAGTACAAAGAGAAATGATTTCTTTGAGCTTATTTATCTTTCTGATTTTTCTCACTAAAAGGTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAGGTTTGTGTTCCGTTCATTTTTGGTGTCATTTTACATTGGTCCCATATGACAACATCCACCTAAACCAACATCCATTGTTGAGCAATCTAAACAGGTTTTTGGTTCTCAAACATAATTTGATTTTCATAAAATGCTTTTTAACACCATATAACAGGCCTCTACGATATTTTTTACATTATTAATTGATTGTAATACGGACATTTGGTTGGCAAAGAAGAATCTGCATCAAAGTTTTATCTATGAAAGGACTCTCTGTATCATTATGTTGTCAATGTGGCACATATCCTGATTGTTTATCATATAATTCACTAATAAGATTTCCTCTATTCATATAATAAATCACCAGTTTTACCCACTTAAGAGAGCAAAAGGTATAAAGGGCTGGAATCACAATGACTTCCAGAATTTGACTAAAACACCTCGCATCTTTTTTAGAGTACTACCGTATAGCTCCCTACAAACCAGAACTAGAAGATAAGATATGAGCTTGTTCCTTAGACCCAAGGTTGCTGGAATCCTTTTATAAATTTCTCTCTTCTGCTGTTATGGATTCTTTGCAGGATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATGGTCAGTTTCTATTTGGGCGTTGCTGAAAATCCAGTCAAATTTCTGTAAATATAACGTATCAACGACTCAATTTGTTGTTTAGAGGGCAAATATTATTTCACAATATATGCATGTGTCCATTTTTACTTGATGAATCAGCTCATGCAACTCTATTTTTGAACATTCTTCCATTTGACTTTTGAGCAAGAGGGTAAGGTGCTAAAAGGTTTGAATAGTTATCTCACTCAATTAAATCTTCAACTACTAAGAAGTGAGCATAGTAAGATCTTTTCAGTGCACCAAACCAAGGCCTTCCTTTTTCTTTCTAACTTCTCTTTACCTATACAGATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG</genome_strand>
        <mrna_strand>GTTGCTCAAATCAGTGTGTGTTTGCAAACACGAGTTTCAGTTTCATGAAGAATGAGTGACTATTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAG............................................................................................................................................................................GACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG...........................................................................................................................................................................GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG..................................................................................................................................................................GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG.......................................................................................................................................................................................................................................................................................................................................ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346076" ref_strand="+" ref_description="SGN-E346076 [cTOF-24-H24]">
      <seq>tcagctaaaaactgttagaccctctccctttcatgactggagccgtgccacaacaaccatggctatgttgttgcgcaaggtatgggaatccgtatctactcgttccacttcgagcaattccacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtccaccggagaatttgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgagatctggacctcttaggacgtttccaaattcagtaccagaattgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattattattgatggtgggtctggctattgcaaatttggttggagtaagtatagtgctccgtcagggagatcagcgacatttttggagtttggcaacattgaatctccaatgtattctagattgagacacttcttttcaacgatatacaccaggatgcangtgaaaacttcacacagccgatcattgtgtncattccgatttgccattatgatgatcctgaatctgataagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76319" stop="73956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76019" g_stop="75611" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75610" i_stop="75439" i_length="172">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75438" g_stop="75353" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="494" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75181" g_stop="75111" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="565" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74948" g_stop="74881" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="633" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74320" g_stop="74259" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="694" r_length="61" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E346076" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76019" e_stop="75611"/>
          <exon e_start="75438" e_stop="75353"/>
          <exon e_start="75181" e_stop="75111"/>
          <exon e_start="74948" e_stop="74881"/>
          <exon e_start="74320" e_stop="74259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATGGTGCGTGCCTTTCTATGTGTTACACTCGATCTTTTAGTTGGCATACTGCTCTAGTTGTTTTTTTTAACTGATTCGAGGATAAATTCTAATGAAACAGAGTATTATGTGAACAGTACAAAGAGAAATGATTTCTTTGAGCTTATTTATCTTTCTGATTTTTCTCACTAAAAGGTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAGGTTTGTGTTCCGTTCATTTTTGGTGTCATTTTACATTGGTCCCATATGACAACATCCACCTAAACCAACATCCATTGTTGAGCAATCTAAACAGGTTTTTGGTTCTCAAACATAATTTGATTTTCATAAAATGCTTTTTAACACCATATAACAGGCCTCTACGATATTTTTTACATTATTAATTGATTGTAATACGGACATTTGGTTGGCAAAGAAGAATCTGCATCAAAGTTTTATCTATGAAAGGACTCTCTGTATCATTATGTTGTCAATGTGGCACATATCCTGATTGTTTATCATATAATTCACTAATAAGATTTCCTCTATTCATATAATAAATCACCAGTTTTACCCACTTAAGAGAGCAAAAGGTATAAAGGGCTGGAATCACAATGACTTCCAGAATTTGACTAAAACACCTCGCATCTTTTTTAGAGTACTACCGTATAGCTCCCTACAAACCAGAACTAGAAGATAAGATATGAGCTTGTTCCTTAGACCCAAGGTTGCTGGAATCCTTTTATAAATTTCTCTCTTCTGCTGTTATGGATTCTTTGCAGGATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG</genome_strand>
        <mrna_strand>TCAGCTAAAAACTGTTAGACCCTCTCCC-TTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAG............................................................................................................................................................................GACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG...........................................................................................................................................................................GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG..................................................................................................................................................................GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCANGTGAAAACTTC-ACACAGCCGATCATTGTGTNCATTCCGATTTGCCATTATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321526" ref_strand="+" ref_description="SGN-E321526 [cTOB-23-N10]">
      <seq>tttgcaaacacgagtttcagtttcatgaagaatgagtgactattcagctaaaaactgttagaccctctcccatttcatgactggagccgtgccacaacaaccatggctatgttgttgcgcaaggtatgggaatccgtatctactcgttccacttcgagcaattccacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtccaccggagaatttgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgagatctggacctcttaggacgtttccaaattcagtaccagaattgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattattattgatggtgggtctggctattgcaaatttggttggagtaagtatagtgctccgtcagggagatcagcgacatttttggagtttggcaacattgaatctcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76362" stop="74623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76062" g_stop="75611" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75610" i_stop="75439" i_length="172">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75438" g_stop="75353" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="538" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75181" g_stop="75111" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="609" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74948" g_stop="74923" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="635" r_length="26" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E321526" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76062" e_stop="75611"/>
          <exon e_start="75438" e_stop="75353"/>
          <exon e_start="75181" e_stop="75111"/>
          <exon e_start="74948" e_stop="74923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCAAACACGAGTTTCAGTTTCATGAAGAATGAGTGACTATTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATGGTGCGTGCCTTTCTATGTGTTACACTCGATCTTTTAGTTGGCATACTGCTCTAGTTGTTTTTTTTAACTGATTCGAGGATAAATTCTAATGAAACAGAGTATTATGTGAACAGTACAAAGAGAAATGATTTCTTTGAGCTTATTTATCTTTCTGATTTTTCTCACTAAAAGGTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATCTCCAAT</genome_strand>
        <mrna_strand>TTTGCAAACACGAGTTTCAGTTTCATGAAGAATGAGTGACTATTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAG............................................................................................................................................................................GACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG...........................................................................................................................................................................GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG..................................................................................................................................................................GAGTTTGGCAACATTGAATCTCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412713" ref_strand="+" ref_description="SGN-E412713 [STM-16-P7]">
      <seq>agccgtgccacaacaataaaaacacttccatggctatgttgttacgcaaggtatgggaatccgtatctactcgttccacttcgagtaactccacctcaaatgtcaattccatggatcggtttgaccagatgatgatgtatgtacagacggcatccaccggagaattcgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgagttctgtatgtaaatcgtggaaattcattgtttccgataatcggctatggatttactttcttcagaatcagcatgagccttgggattctacttttttctctgaaactcacttgagatctggtcctcttcggacgtttccaaattcagtaccagaactgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattatcattgacggtgggtcaggctattgcaaatttggttggagtaagtatagtgctccgtcagggagatcagcgacattcttggaatttggcaacattgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76269" stop="74629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75961" g_stop="75611" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="367" r_length="339" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75610" i_stop="75439" i_length="172">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.891" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75438" g_stop="75353" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="453" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171">
            <donor d_prob="0.942" d_score="0.96"/>
            <acceptor a_prob="0.948" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75181" g_stop="75111" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="524" r_length="71" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162">
            <donor d_prob="0.924" d_score="0.98"/>
            <acceptor a_prob="0.541" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74948" g_stop="74929" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="544" r_length="20" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E412713" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E412713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75961" e_stop="75611"/>
          <exon e_start="75438" e_stop="75353"/>
          <exon e_start="75181" e_stop="75111"/>
          <exon e_start="74948" e_stop="74929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATGGTGCGTGCCTTTCTATGTGTTACACTCGATCTTTTAGTTGGCATACTGCTCTAGTTGTTTTTTTTAACTGATTCGAGGATAAATTCTAATGAAACAGAGTATTATGTGAACAGTACAAAGAGAAATGATTTCTTTGAGCTTATTTATCTTTCTGATTTTTCTCACTAAAAGGTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTGGTGAGCTTTCTTATGAGTTAACAGTTGTAGTTGTTAATTTGTGAAAATCACTTGCATTTTTGACTATTTGAGGCTTTTTTTGTTGTTTTAACTACTTGTATTGTTCCATGTGCTCGGCAAATTCTCACCCTAATCCTTCCTGAAAAATTGTACCATTGACAGGAGTTTGGCAACATTGAATC</genome_strand>
        <mrna_strand>CATGGCTATGTTGTTACGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGTAACTCCACCTCAA-----------A-TGTCAATTCCATGGATCGGTTTGACCAGATGATGATGTATGTACAGACGGCATCCACCGGAGAATTCGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGAGTTCTGTATGTAAATCGTGGAAATTCATTGTTTCCGATAATCGGCTATGGATTTACTTTCTTCAGAATCAGCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGTCCTCTTCG............................................................................................................................................................................GACGTTTCCAAATTCAGTACCAGAACTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATCATTGACG...........................................................................................................................................................................GTGGGTCAGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTCTTG..................................................................................................................................................................GAATTTGGCAACATTGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202603" ref_strand="+" ref_description="SGN-E202603 [cLEC-19-N13]">
      <seq>ccacttcgagcaattccacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtccaccggagaatttgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgagatctggacctcttaggtaaattcctttttacagttctgctttttgaatgtcaaattaggtgaactttccaattggtttaatgtaatttagctgaactaatttgggacggagggagtagtagatgaaagagtgaagtatagatgaggatatcatgagtagctggtttgataaggtgtatgatttgtaggacgtttccaaattcagtaccagaattgtcattcatgagtatttatggtcaacgtgctcaagtgcccggtgctattattattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76214" stop="75055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75914" g_stop="75355" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="560" r_length="560" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E202603" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75914" e_stop="75355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGA</genome_strand>
        <mrna_strand>CCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277824" ref_strand="+" ref_description="SGN-E277824 [cLEL-5-C4](-)">
      <seq>ggtccagatctccagtgagtttcagagaaaaaagtagaatcccaaggctcatggtgattttgaagaaagtaaatccataggcgattatcggaaacaatgtatttccaggatttacatacagaagtcagcttagcagactcttttggccctaaaatcttcaaaatttgaatgaaaatatctaacggaatccgatcaaattctccggtggacgccgtctgtatatacatcatcatctggtcgaaccgatccatggaattgacagtcgagatcgaagttgaggtggaattgctcgaagtggaacgagtagatacggattcccataccttgcgcaacaacatagccatggttgttgtggcacggctccagtcatgaaatgggagagggtctaacagtttttagctgaatagtcactcattcttcatgaaactgaaactcgtgtttctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="75317" stop="76357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75617" g_stop="76057" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E277824" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75617" e_stop="76057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCCAGATCTCAAGTGAGTTTCAGAGAAAAAAGTAGAATCCCAAGGCTCATGGTGATTCTGAAGAAAGTAAATCCATAGGCGATTATCGGAAACAATGTATTTCCAGGATTTACATACAGAAGTCAGCTTAGCAGACTCTTTTGGCCCTAAAATCTTCAAAATTTGAATGAAAATATCTAACGGAATCCGATCAAATTCTCCGGTGGACGCCGTCTGTATATACATCATCATCTGGTCGAACCGATCCATGGAATTGACAGTCGAGATCGAAGTTGAGGTGGAATTGCTCGAAGTGGAACGAGTAGATACGGATTCCCATACCTTGCGCAACAACATAGCCATGGTTGTTGTGGCACGGCTCCAGTCATGAAATGGGAGAGGGTCTAACAGTTTTTAGCTGAATAGTCACTCATTCTTCATGAAACTGAAACTCGTGTTT</genome_strand>
        <mrna_strand>GGTCCAGATCTCCAGTGAGTTTCAGAGAAAAAAGTAGAATCCCAAGGCTCATGGTGATTTTGAAGAAAGTAAATCCATAGGCGATTATCGGAAACAATGTATTTCCAGGATTTACATACAGAAGTCAGCTTAGCAGACTCTTTTGGCCCTAAAATCTTCAAAATTTGAATGAAAATATCTAACGGAATCCGATCAAATTCTCCGGTGGACGCCGTCTGTATATACATCATCATCTGGTCGAACCGATCCATGGAATTGACAGTCGAGATCGAAGTTGAGGTGGAATTGCTCGAAGTGGAACGAGTAGATACGGATTCCCATACCTTGCGCAACAACATAGCCATGGTTGTTGTGGCACGGCTCCAGTCATGAAATGGGAGAGGGTCTAACAGTTTTTAGCTGAATAGTCACTCATTCTTCATGAAACTGAAACTCGTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E292495" ref_strand="+" ref_description="SGN-E292495 [cLET-16-D6]">
      <seq>ttcagctaaaaactgttagaccctctcccatttcatgactggagccgtgccacaacaaccatggctatgttgttgcgcaaggtatgggaatccgtatctactcgttccacttcgagcaattccacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtccaccggagaatttgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgagatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76320" stop="75322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76020" g_stop="75622" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E292495" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76020" e_stop="75622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCT</genome_strand>
        <mrna_strand>TTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325003" ref_strand="+" ref_description="SGN-E325003 [cTOC-11-P12]">
      <seq>cacctcaacttcgatctcgactgtcaattccatggatcggttcgaccagatgatgatgtatatacagacggcgtgcaccggagaatttgatcggattccgttagatattatcattcaaatcttgaagatttcagggccaaaagagtctgctaagctgacttctgtatgtaaatcctggaaatacattgtttccgataatcgcctatggatttactttcttcagaatcaccatgagccttgggattctacttttttctctgaaactcacttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76198" stop="75326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75898" g_stop="75626" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E325003" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75898" e_stop="75626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAG</genome_strand>
        <mrna_strand>CACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTGCACCGGAGAATTTGATCGGATTCCGTTAGATATTATCATTCAAATCTTGAAGATTTCAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E471138" ref_strand="+" ref_description="SGN-E471138 [cSTB-22-J13]">
      <seq>agccgtgccacaacaataaaaacacttccatggctatgttgttacgcaaggtatgggaatccgtatctactcgttccacttcgagtaactccacctcaaatgtcaattccatggatcggtttgaccagatgatgatgtatgtacagacggcatccaccggagaattcgatcggattccgttagatattttcattcaaattttgaagattttagggccaaaagagtctgctaagctgagttctgtatgtaaatcgtggaaattcattgtttccgataatcggctatggatttactttcttcagaatcagcatgagccctgggattctacttttttctctgaaactca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="76269" stop="75332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75961" g_stop="75632" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="346" r_length="318" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E471138" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>330</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E471138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75961" e_stop="75632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCA</genome_strand>
        <mrna_strand>CATGGCTATGTTGTTACGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGTAACTCCACCTCAA-----------A-TGTCAATTCCATGGATCGGTTTGACCAGATGATGATGTATGTACAGACGGCATCCACCGGAGAATTCGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGAGTTCTGTATGTAAATCGTGGAAATTCATTGTTTCCGATAATCGGCTATGGATTTACTTTCTTCAGAATCAGCATGAGCCCTGGGATTCTACTTTTTTCTCTGAAACTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717631" ref_strand="+" ref_description="SGN-E717631 [FC02BB08]">
      <seq>gactgaaatccccaatacccacatatactcctcaacacacccaaatttgcattgcatttcatcaaacaacaaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcaaacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccaaagagaaaatgtagcgaaacaggtgccatctcaaaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaancccccccaaaagggccccctttaaattttttaagggccccccaaaaaagggggggaaaaaaggggaaaaattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88333" stop="108182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88632" g_stop="89240" g_length="609"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="609" r_length="609" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89241" i_stop="89479" i_length="239">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89480" g_stop="89491" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="621" r_length="12" r_score="0.583"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89492" i_stop="89813" i_length="322">
            <donor d_prob="0.841" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89814" g_stop="89825" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="633" r_length="12" r_score="0.833"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89826" i_stop="90111" i_length="286">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.44"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90112" g_stop="90212" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="734" r_length="101" r_score="0.465"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E717631" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88632" e_stop="89240"/>
          <exon e_start="89480" e_stop="89491"/>
          <exon e_start="89814" e_stop="89825"/>
          <exon e_start="90112" e_stop="90212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTGAAATCCCCAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTCGCTGTGATGAATGGTTTCCAATAATGCCACGAGGCAGAGAGCCTTTCAACTGAAATAGATCTAATCGGATTGCTTGGTTCCCATTGCTTCAAAAATGAATTGAAAATAATATCTTAGAAGATGACTATATAAATTATAGCTCCATCACTTCGCGTAGGGATCCGTATGGTAGGATATATTAGAGAAAATAATACTGGTATTATCGAATTCCTTTTTTGATAGTGTTTTCAGAATTTTTAACCAAACTAAGTCATTATATAAAACAATTTACCAAAGTAATACATTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACGGTAACGTTTTAGGATATATTTTATTTTTTAAAAACTAACAGCATTAGGTTGATATATGTTACTGTAAGTAACGTTTTACTTTTAAAACGTTATTTTCAGTAACGTTTTACACCTAAAACGTTGCTGTGAGTAACGTTTTAGGAGTAAAACGTTACTGTGAGTAATGTATATCAATCTGACGCCATCAACTTTTAAAAAATAAAATATATCCTAAAACGTTACTGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAACATATTATTTTGGTGAATGACTTTATATAATGACTTAGTTTGGTTAAAACCTCGTGTTTTCAATAGTATAACTAGCTAATACATAATCTTACTTGTACGTCTTGTTCAACAGTATTCTTATCAATAATAAATCATGATATTAACAATACAAAACTTTTTCTAAGCTTTTTATTTCTAACATACGTTATTCAATATAATTTTTATACTTCATACCAAGCGATGATGAGAATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGACGCTTTCATATATATTATGGTCACGAGAATGTGGGCAGTAAACAGTTGGGACTTAATAAT</genome_strand>
        <mrna_strand>GACTGAAATCCCCAATACCCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAAACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAAAGAGAAAATGTAGCGAAACAGGTGCCATCTCAAAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCNNAAAAAAAAAA...............................................................................................................................................................................................................................................AAAAAAAAAAAA..................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAANCCCCCCCAAAAGGGCCCCCTTTAAATTTTTTAAGGGCCCCCCAAAAAAGGGGGGGAAAAAAGGGGAAAAATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717791" ref_strand="+" ref_description="SGN-E717791 [FC02DA07]">
      <seq>aatcggccgaattgactgaaatccccaataaccacatatactcctcaacacacccaaatttgcattgcatttcatcaaacaacaaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcaaacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcaaaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88333" stop="108174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88635" g_stop="89240" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="622" r_length="606" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89241" i_stop="91280" i_length="2040">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.60"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91281" g_stop="91325" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="667" r_length="45" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E717791" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88635" e_stop="89240"/>
          <exon e_start="91281" e_stop="91325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATCCCCAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTCGCTGTGATGAATGGTTTCCAATAATGCCACGAGGCAGAGAGCCTTTCAACTGAAATAGATCTAATCGGATTGCTTGGTTCCCATTGCTTCAAAAATGAATTGAAAATAATATCTTAGAAGATGACTATATAAATTATAGCTCCATCACTTCGCGTAGGGATCCGTATGGTAGGATATATTAGAGAAAATAATACTGGTATTATCGAATTCCTTTTTTGATAGTGTTTTCAGAATTTTTAACCAAACTAAGTCATTATATAAAACAATTTACCAAAGTAATACATTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACGGTAACGTTTTAGGATATATTTTATTTTTTAAAAACTAACAGCATTAGGTTGATATATGTTACTGTAAGTAACGTTTTACTTTTAAAACGTTATTTTCAGTAACGTTTTACACCTAAAACGTTGCTGTGAGTAACGTTTTAGGAGTAAAACGTTACTGTGAGTAATGTATATCAATCTGACGCCATCAACTTTTAAAAAATAAAATATATCCTAAAACGTTACTGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAACATATTATTTTGGTGAATGACTTTATATAATGACTTAGTTTGGTTAAAACCTCGTGTTTTCAATAGTATAACTAGCTAATACATAATCTTACTTGTACGTCTTGTTCAACAGTATTCTTATCAATAATAAATCATGATATTAACAATACAAAACTTTTTCTAAGCTTTTTATTTCTAACATACGTTATTCAATATAATTTTTATACTTCATACCAAGCGATGATGAGAATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGACGCTTTCATATATATTATGGTCACGAGAATGTGGGCAGTAAACAGTTGGGACTTAATAATACTTATTTCTTGCCTTTACCATATATTTTTTACCGTTAATTCCCTCCTAAATGTTTCAGAATTATAATCTTTCAGAAAAGGAAAATTAGTCACCATCTTCATTTTCTCTATAGGTGTCATATGAAAAGCTTTTGTAATTTGTTTGTGTATGGCTAATTAATATAAAAAGAATTAATTTAGCCTAGGTTTAAAAAAGTAAATGTATTTTTCAACTTGTAAAAAATAGTTTCTTGTTCTAAATCAAAGTATATATGTATATAGTTTTGCTATGATAAACTAAACTATAGTTTCTACAATAGCTAGTTATGGTAAAATGTTAGCTAGTTATGGTAAAATGTTATATTTAGTTTATCAGTGTAAATACTGGATACATCTAATTTCTGATCCCACGTAGGTAAATATATCAACAAAAAATGATTTTTGCATTATATATATATATATATATATATATATATATAGTGTGTGTGTGTTTTTGGTTTTTCTCCTTTATAGTCTCTTCTTACAAGACCTTCTATTCCTCTTCCTAAGCCGTGACTTACGGTTTGAACACTTACAAATTAACTAATATATCAATTCAATCATCACAATACTTCCCTACCTCTCAAAATATCATTTCTTTTCAAAAGTTAATTTAACTAATTTTTGAAAAATTATATTGGACAGACTAATATTCAAAAACTACATGAAAAATATTGTAGTATAAGTTATAAATCATAAGTTAATTTGACTAATTTAATATTTGAAGTATAAGTTATAAATCATAAGTTAATTTGACTAATTTAATATTTGAAATTTAAAAGTTAAATATTCAAAATCTTTCTGAAAAGTATTTTAAATTGTGATTCTTCTTTTATCAATATGATACTATTATACCCAATATAATATCAATATGATAATATAACATCAATATGATAATATCAATATTATAATATGGTTCTTCTTATATCAATATGACACTATTGTACCCGATATAATATCAATATGATAATACCATATTCAATTTAATTCCACGAGTGAAGCTAAAAAAAATGAATATTTATCTGACCTTAAATTTTTGATAAATTCTAGATTCAAAAAAATTAATTCTCAAATATTAATATAATAAAAAATACA</genome_strand>
        <mrna_strand>TGAAATCCCCAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAAACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAAAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCNNAAAAAAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712137" ref_strand="-" ref_description="SGN-E712137 [FB04AA07]">
      <seq>gggggagggggggtggggccccccccccggccnntttttttnttatttttttttcttcccccccctttttttttttttttttttttttttttttttttttttttttactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagtttgttgtttgatgaaatgcaatgcaaatttgggtgtgttgaggagtatatgtggttattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108169" stop="88344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93591" g_stop="93492" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.470"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93491" i_stop="90774" i_length="2718">
            <donor d_prob="0.639" d_score="0.56"/>
            <acceptor a_prob="0.427" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90773" g_stop="90767" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="105" r_length="7" r_score="0.714"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90766" i_stop="89244" i_length="1523">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89243" g_stop="88644" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="705" r_length="600" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E712137" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712137" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="93591" e_stop="93492"/>
          <exon e_start="90773" e_stop="90767"/>
          <exon e_start="89243" e_stop="88644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAACGTGACAGTCAATTTTCCACACATTAGCAGTTTTAGAATGACTCTTCCTAATCCCTTCCCTCTCTTCCTCTTCTTCTTCTCATTTTCTCATATTAGTAATTATCTCTGCGTTTTTTAAGCTCATGAATTTTTTTTTTCCTCGCCATGACTTTCCTTTTCAGCTAAGTTACCTCCTTCTCATGAGCTCGTAGTTAACATATATATTTTTTCTATAAATTTTACTGTTTAGCTACAAAATTTGTTTATTCGCTTGTTATTCAAGTTGGCATGGGTACGTTACTGATAAATCAGATCTCGGAAAAGGAGGTGTTAGGAGATGAGAAAGATGATGTTATGGGATTTGGAGATGAAGATGAAATTTCGAAAGATAATAAGAGGAGGATTTGTCGTGTGTGTAAGAAAGTATTTGGTTCTGGTAAAGCATTAGGAGGTCACATGAGAATTCACGTTGAGTCTCGTTCTAAAAAGGAAAAATCAAAACCACGTGAAGAAGTGGATGTAGAAAATTGCAATAATGATGAGTTGGTACCAATTTGTAAAGTCTGTGGTAAGGTTTTTCCATCGATGAAATCGTTGTTTGGGCATATGAGATCTCATCCTGAACGGGAATGGAGAGGAATTCTTCCTCCTCATTTGAAATCTAACGATGTAAAAAAAGCGAAAAAAACAGCTTCTGTACCTGGATGGTCAGTTACAGCTAAGCGAGGGAGAAAGCCCAATGCTGAAGAAGAAGATGAACAATTGCAGGATGCTGTTCATCACCTTATGCTGCTCGCAAACGGAGATTCAATCGAGTCTGTTGTTACTGGACATGATCATACTCCTGAAGAAGAATTGGAGAAAACGAACAGTAATTCTCTTACTTCCAAAGCTGAAAATGAGGAATTTGTTTCTGAAGAATTGGATAGGAAGAAAAAGAAGAGGAAGTTGAGGCATCTGAATTCTGTACATGATAGTCCAGCTTCAGTTGCAGTTACAGCAACGCCTGAAAAATACGAGTGCAACACTTGTGGGAAAAGCTTCGCAACTCATCAAGCACTTGGTGGACATAAATCAAGTCACAATAAGTTGAGAATCGTAATCGAAAATTCCAACGATTCAATCATTGAAGAAGCAGCTGCTAGCAGCTCAAAGTTGTTGGGTGATAGCAAATTATCAACCACTGGAGGAAGAATTGCGGATTTTGATCTCAATGAATTGCCCTCTGATCATGACAATGAACTTGCTGGTAATCCTGATTACTTTCCCTTTTTTTCTATTTAACAATATTGAAGTCTTGAAGTTTGATCAATCGACTCCTCGGATGCTTTCTGCACCAGACTGTTATCGATAGTACATTAGTTTTAGTCTATATATCAGTTTAAATTTCTAATCATTGCAAAAATACTTAGTAATTAGCCATCTTGGTTACGTAGCTTGTGTTCTTTTTTCCTTGTTTAACATCCTTAGCTTAATTATGTGGTGTTTTGAAGTTGGGATTTGTTTGTTATTATCTTGATTGGAAGCATAATTGTCTAAACAAGCCTGCTGGAAAACACCAAATGTATATAAATATGCACAAGATTTCTTGGTTTATTAATTTAGTTTCGATTTCTCTCAGAATTGTTTTTGCTTGAATCGTCGATCTATAAAAAAACAACTCTCTTAAAGATCTGTTATAACTTCACTATCTCGGGTTTGTTATTATTATTGTTGATTTCTCCGTGACATATATTTAGGTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTTTGAATGAAAAATTATTACTATAAGTTGCATTTTAATATGATAAGAAAACTGAATTTCAAAATTTTGGTCAAAATTCACGTAATTTGAAACTTCGAATCTTGGTAAATTAAAAGCCATATATAGTTTGGGTCGGAAGGGGAGGTAGATGTGGTGTGATTGCTTGATTTCTTTTTCAAAAATAACCTTTCTGTCTCCGTTGTAAATCAATACAGTTTATATGTTATTGTTGTTGTAGTATTTAATAAGACTAAAAAAATAATGAAATCTCGATAAATTTAGTCAAACTTTATCATTTATTCTGATTAGGAAGAAAGAGAAATTCAAGGACACATAGAAGACCAAAGGAAATCTTTAAACAATTGGACTCTAAACTTTGGTTGCAAGTATATAACTATAAAAAAGAATGTGTAAATCCTTTTAACAAATTACTCCTTTCATCTCAAATCACTAGTGACGTTTTCGATATTTTGAAATGTATTTTTTATTATATTAATATTTGAGAATTAATTTTTTTGAATCTAGAATTTATCAAAAATTTAAGGTCAGATAAATATTCATTTTTTTTAGCTTCACTCGTGGAATTAAATTGAATATGGTATTATCATATTGATATTATATCGGGTACAATAGTGTCATATTGATATAAGAAGAACCATATTATAATATTGATATTATCATATTGATGTTATATTATCATATTGATATTATATTGGGTATAATAGTATCATATTGATAAAAGAAGAATCACAATTTAAAATACTTTTCAGAAAGATTTTGAATATTTAACTTTTAAATTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTACAATATTTTTCATGTAGTTTTTGAATATTAGTCTGTCCAATATAATTTTTCAAAAATTAGTTAAATTAACTTTTGAAAAGAAATGATATTTTGAGAGGTAGGGAAGTATTGTGATGATTGAATTGATATATTAGTTAATTTGTAAGTGTTCAAACCGTAAGTCACGGCTTAGGAAGAGGAATAGAAGGTCTTGTAAGAAGAGACTATAAAGGAGAAAAACCAAAAACACACACACACTATATATATATATATATATATATATATATATAATGCAAAAATCATTTTTTGTTGATATATTTACCTACGTGGGATCAGAAATTAGATGTATCCAGTATTTACACTGATAAACTAAATATAACATTTTACCATAACTAGCTAACATTTTACCATAACTAGCTATTGTAGAAACTATAGTTTAGTTTATCATAGCAAAACTATATACATATATACTTTGATTTAGAACAAGAAACTATTTTTTACAAGTTGAAAAATACATTTACTTTTTTAAACCTAGGCTAAATTAATTCTTTTTATATTAATTAGCCATACACAAACAAATTACAAAAGCTTTTCATATGACACCTATAGAGAAAATGAAGATGGTGACTAATTTTCCTTTTCTGAAAGATTATAATTCTGAAACATTTAGGAGGGAATTAACGGTAAAAAATATATGGTAAAGGCAAGAAATAAGTATTATTAAGTCCCAACTGTTTACTGCCCACATTCTCGTGACCATAATATATATGAAAGCGTCATTCCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTTGATGAAATGCAATGCAAATTTGGGTGTGTTGAGGAGTATATGTGGTTATTG</genome_strand>
        <mrna_strand>GGGGGAGGGGGGGT-GGGGCCCCCCCCCCGGCCNNTTTTTTTNTTATTTTTTTTTCTTCC-CCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTTGATGAAATGCAATGCAAATTTGGGTGTGTTGAGGAGTATATGTGGTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732466" ref_strand="+" ref_description="SGN-E732466 [LB02BA05]">
      <seq>caataaccacatatactcctcaacacacccaaatttgcattgcatttcatcaaacaacaaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccaaagaattactagtanaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88344" stop="89543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88644" g_stop="89240" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="600" polyA_stop="616"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E732466" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88644" e_stop="89240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA</genome_strand>
        <mrna_strand>CAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717807" ref_strand="-" ref_description="SGN-E717807 [FC02DB11]">
      <seq>tttttttttttttttttttttttttttttttttttttttttttttttttntggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattttgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagtttgttgtttgatgaaatgcaatgcaaatttgggtgtgttgaggagtatatgtggttcaattcggccgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108168" stop="88342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90133" g_stop="90098" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.556"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90097" i_stop="89244" i_length="854">
            <donor d_prob="0.150" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89243" g_stop="88648" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="632" r_length="596" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E717807" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717807" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="90133" e_stop="90098"/>
          <exon e_start="89243" e_stop="88648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTTGATGAAATGCAATGCAAATTTGGGTGTGTTGAGGAGTATATGTGGTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTNTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTTTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTTGATGAAATGCAATGCAAATTTGGGTGTGTTGAGGAGTATATGTGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E616326" ref_strand="+" ref_description="SGN-E616326 [66134]">
      <seq>caacctccacacaactcaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagaccactcaacaaacccactgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaacccgaaatctcgctgtgaaagctgaactcaacccatcaattgtcatcagtttgagcactgggctttcacttttccttggaaggttcgttttctttaatttccagagagaaaatatggcgaaacaagtgccgtctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaagtctaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttccagcaatggatatgatcccagtttctttggctgaaccaaaaaaacaaaaaagtatgatgtgttttttttttttaactgatttatgtgaaattgatgtggtttggtttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88398" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88691" g_stop="89225" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="538" polyA_stop="547"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E616326" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E616326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88691" e_stop="89225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGT</genome_strand>
        <mrna_strand>CAACCTCCACACAACTCAAA-AATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCACTCAACAAACCCACTGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAAACCCGAAATCTCGCTGTGAAAGCTGAACTCAACCCATCAATTGTCATCAGTTTGAGCACTGGGCTTTCACTTTTCCTTGGAAGGTTCGTTTTCTTTAATTTCCAGAGAGAAAATATGGCGAAACAAGTGCCGTCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAGTCTAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCCAGCAATGGATATGATCCCAGTTTCTTTGGCTGAACCAAAAAAACAAAAAAGTATGATGTGTTTTTTTTTTTTAACTGA-TTTATGTGAAATTGATGTGGTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E612700" ref_strand="+" ref_description="SGN-E612700 [62465]">
      <seq>caacctccacacaactcaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagaccactcaacaaacccactgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaacccgaaatctcgctgtgaaagctgaactcaacccatcaattgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttctttaatttccagagagaaaatgtagcgaaacaagtgccgtctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgctaaaatctaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttccagcaatggatatgatcccagtttctttgggtgaaccaaaaaaaaaaaaaagtatgatgtgtccatgtttaactgatttatgtgaaattgatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88398" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88691" g_stop="89218" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E612700" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E612700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88691" e_stop="89218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTG</genome_strand>
        <mrna_strand>CAACCTCCACACAACTCAAA-AATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCACTCAACAAACCCACTGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAAACCCGAAATCTCGCTGTGAAAGCTGAACTCAACCCATCAATTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTTAATTTCCAGAGAGAAAATGTAGCGAAACAAGTGCCGTCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGCTAAAATCTAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCCAGCAATGGATATGATCCCAGTTTCTTTGGGTG-A-ACCAAAAAAAAAAAAAAGTATGATGTGTCCATGT-TTAACTGA-TTTATGTGAAATTGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737267" ref_strand="-" ref_description="SGN-E737267 [LC09AD01]">
      <seq>ttttttttccccccccttttgggggaaatgggttccccccccccccccccggttttttttttttttttttttttttttttttttttttttnnnggatgcatagtcgaattcaaatgcaaaagaaaacagagatagtactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagtttgttgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108164" stop="88395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92281" g_stop="92265" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="0.529"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92264" i_stop="91869" i_length="396">
            <donor d_prob="0.729" d_score="0.00"/>
            <acceptor a_prob="0.711" a_score="0.46"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91868" g_stop="91799" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="87" r_length="70" r_score="0.500"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91798" i_stop="89292" i_length="2507">
            <donor d_prob="0.000" d_score="0.52"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89291" g_stop="88695" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="684" r_length="597" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E737267" ref_strand="-">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737267" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="92281" e_stop="92265"/>
          <exon e_start="91868" e_stop="91799"/>
          <exon e_start="89291" e_stop="88695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTCTGCACCAGACTGTTATCGATAGTACATTAGTTTTAGTCTATATATCAGTTTAAATTTCTAATCATTGCAAAAATACTTAGTAATTAGCCATCTTGGTTACGTAGCTTGTGTTCTTTTTTCCTTGTTTAACATCCTTAGCTTAATTATGTGGTGTTTTGAAGTTGGGATTTGTTTGTTATTATCTTGATTGGAAGCATAATTGTCTAAACAAGCCTGCTGGAAAACACCAAATGTATATAAATATGCACAAGATTTCTTGGTTTATTAATTTAGTTTCGATTTCTCTCAGAATTGTTTTTGCTTGAATCGTCGATCTATAAAAAAACAACTCTCTTAAAGATCTGTTATAACTTCACTATCTCGGGTTTGTTATTATTATTGTTGATTTCTCCGTGACATATATTTAGGTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTTTGAATGAAAAATTATTACTATAAGTTGCATTTTAATATGATAAGAAAACTGAATTTCAAAATTTTGGTCAAAATTCACGTAATTTGAAACTTCGAATCTTGGTAAATTAAAAGCCATATATAGTTTGGGTCGGAAGGGGAGGTAGATGTGGTGTGATTGCTTGATTTCTTTTTCAAAAATAACCTTTCTGTCTCCGTTGTAAATCAATACAGTTTATATGTTATTGTTGTTGTAGTATTTAATAAGACTAAAAAAATAATGAAATCTCGATAAATTTAGTCAAACTTTATCATTTATTCTGATTAGGAAGAAAGAGAAATTCAAGGACACATAGAAGACCAAAGGAAATCTTTAAACAATTGGACTCTAAACTTTGGTTGCAAGTATATAACTATAAAAAAGAATGTGTAAATCCTTTTAACAAATTACTCCTTTCATCTCAAATCACTAGTGACGTTTTCGATATTTTGAAATGTATTTTTTATTATATTAATATTTGAGAATTAATTTTTTTGAATCTAGAATTTATCAAAAATTTAAGGTCAGATAAATATTCATTTTTTTTAGCTTCACTCGTGGAATTAAATTGAATATGGTATTATCATATTGATATTATATCGGGTACAATAGTGTCATATTGATATAAGAAGAACCATATTATAATATTGATATTATCATATTGATGTTATATTATCATATTGATATTATATTGGGTATAATAGTATCATATTGATAAAAGAAGAATCACAATTTAAAATACTTTTCAGAAAGATTTTGAATATTTAACTTTTAAATTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTACAATATTTTTCATGTAGTTTTTGAATATTAGTCTGTCCAATATAATTTTTCAAAAATTAGTTAAATTAACTTTTGAAAAGAAATGATATTTTGAGAGGTAGGGAAGTATTGTGATGATTGAATTGATATATTAGTTAATTTGTAAGTGTTCAAACCGTAAGTCACGGCTTAGGAAGAGGAATAGAAGGTCTTGTAAGAAGAGACTATAAAGGAGAAAAACCAAAAACACACACACACTATATATATATATATATATATATATATATATAATGCAAAAATCATTTTTTGTTGATATATTTACCTACGTGGGATCAGAAATTAGATGTATCCAGTATTTACACTGATAAACTAAATATAACATTTTACCATAACTAGCTAACATTTTACCATAACTAGCTATTGTAGAAACTATAGTTTAGTTTATCATAGCAAAACTATATACATATATACTTTGATTTAGAACAAGAAACTATTTTTTACAAGTTGAAAAATACATTTACTTTTTTAAACCTAGGCTAAATTAATTCTTTTTATATTAATTAGCCATACACAAACAAATTACAAAAGCTTTTCATATGACACCTATAGAGAAAATGAAGATGGTGACTAATTTTCCTTTTCTGAAAGATTATAATTCTGAAACATTTAGGAGGGAATTAACGGTAAAAAATATATGGTAAAGGCAAGAAATAAGTATTATTAAGTCCCAACTGTTTACTGCCCACATTCTCGTGACCATAATATATATGAAAGCGTCATTCCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTT</genome_strand>
        <mrna_strand>TTTTTTTTCCCCCCCCT............................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGGGAAATGGGTTCCCCCCCCCCCCCCCCGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTNNNGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740658" ref_strand="+" ref_description="SGN-E740658 [LC22BE09]">
      <seq>aaacaacaaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccaaagaattactagtactatctctgttttcttttgcatttgaattcgactatgcatccnanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaannncctggggggggggggggggaccaatttccccctagggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88395" stop="108163"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88695" g_stop="89291" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89292" i_stop="89811" i_length="520">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89812" g_stop="89825" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="611" r_length="14" r_score="0.714"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89826" i_stop="90111" i_length="286">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.48"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90112" g_stop="90172" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="672" r_length="61" r_score="0.459"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E740658" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88695" e_stop="89291"/>
          <exon e_start="89812" e_stop="89825"/>
          <exon e_start="90112" e_stop="90172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTCGCTGTGATGAATGGTTTCCAATAATGCCACGAGGCAGAGAGCCTTTCAACTGAAATAGATCTAATCGGATTGCTTGGTTCCCATTGCTTCAAAAATGAATTGAAAATAATATCTTAGAAGATGACTATATAAATTATAGCTCCATCACTTCGCGTAGGGATCCGTATGGTAGGATATATTAGAGAAAATAATACTGGTATTATCGAATTCCTTTTTTGATAGTGTTTTCAGAATTTTTAACCAAACTAAGTCATTATATAAAACAATTTACCAAAGTAATACATTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACGGTAACGTTTTAGGATATATTTTATTTTTTAAAAACTAACAGCATTAGGTTGATATATGTTACTGTAAGTAACGTTTTACTTTTAAAACGTTATTTTCAGTAACGTTTTACACCTAAAACGTTGCTGTGAGTAACGTTTTAGGAGTAAAACGTTACTGTGAGTAATGTATATCAATCTGACGCCATCAACTTTTAAAAAATAAAATATATCCTAAAACGTTACTGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAACATATTATTTTGGTGAATGACTTTATATAATGACTTAGTTTGGTTAAAACCTCGTGTTTTCAATAGTATAACTAGCTAATACATAATCTTACTTGTACGTCTTGTTCAACAGTATTCTTATCAATAATAAATCATGATATTAACAATACAAAACTTTTTCTAAGCTTTTTATTTCTAACATACGTTATTCAATATAATTTTTATACTTCATACCAAGCGATGATGAGAATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGACGCTTTCATATATATTATGG</genome_strand>
        <mrna_strand>AAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCNANAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAANNNCCTGGGGGGGGGGGGGGGGACCAATTTCCCCCTAGGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733322" ref_strand="-" ref_description="SGN-E733322 [LB04CC06]">
      <seq>tttttttttttttttttttactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagttattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108155" stop="88403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89486" g_stop="89473" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="14" r_length="14" r_score="0.643"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89248" i_length="225">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89247" g_stop="88698" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="563" r_length="549" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E733322" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733322" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89486" e_stop="89473"/>
          <exon e_start="89247" e_stop="88698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTT.................................................................................................................................................................................................................................TTTTTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAG-TTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735476" ref_strand="+" ref_description="SGN-E735476 [LC01DA08]">
      <seq>aataaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacccatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccaaagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattctgggggggggggggggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88399" stop="108175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88699" g_stop="89240" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89241" i_stop="89479" i_length="239">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89480" g_stop="89491" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="543" r_stop="554" r_length="12" r_score="0.583"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89492" i_stop="89813" i_length="322">
            <donor d_prob="0.841" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89814" g_stop="89825" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="566" r_length="12" r_score="0.833"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89826" i_stop="90111" i_length="286">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.59"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90112" g_stop="90152" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="607" r_length="41" r_score="0.585"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E735476" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E735476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88699" e_stop="89240"/>
          <exon e_start="89480" e_stop="89491"/>
          <exon e_start="89814" e_stop="89825"/>
          <exon e_start="90112" e_stop="90152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTCGCTGTGATGAATGGTTTCCAATAATGCCACGAGGCAGAGAGCCTTTCAACTGAAATAGATCTAATCGGATTGCTTGGTTCCCATTGCTTCAAAAATGAATTGAAAATAATATCTTAGAAGATGACTATATAAATTATAGCTCCATCACTTCGCGTAGGGATCCGTATGGTAGGATATATTAGAGAAAATAATACTGGTATTATCGAATTCCTTTTTTGATAGTGTTTTCAGAATTTTTAACCAAACTAAGTCATTATATAAAACAATTTACCAAAGTAATACATTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACGGTAACGTTTTAGGATATATTTTATTTTTTAAAAACTAACAGCATTAGGTTGATATATGTTACTGTAAGTAACGTTTTACTTTTAAAACGTTATTTTCAGTAACGTTTTACACCTAAAACGTTGCTGTGAGTAACGTTTTAGGAGTAAAACGTTACTGTGAGTAATGTATATCAATCTGACGCCATCAACTTTTAAAAAATAAAATATATCCTAAAACGTTACTGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAACATATTATTTTGGTGAATGACTTTATATAATGACTTAGTTTGGTTAAAACCTCGTGTTTTCAATAGTATAACTAGCTAATACATAATCTTACTTGTACGTCTTGTTCAACAGTATTCTTATCAATAATAAATCATGATATTAACAATACAAAACTTTTTCTAAGCTTTTTATTTCTAACATACGTTATTCAATATAATTTTTATACTTCATACCAAGCGATGATGAGAATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGA</genome_strand>
        <mrna_strand>AATAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCCATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAAAAAAAA...............................................................................................................................................................................................................................................AAAAAAAAAAAA..................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAATTCTGGGGGGGGGGGGGGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735722" ref_strand="-" ref_description="SGN-E735722 [LC02DA08]">
      <seq>ccccccccccccccgaattttttttttttttttttttttttttttttttttttttttttttttttttttctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagtttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108175" stop="88402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90147" g_stop="90098" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.520"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90097" i_stop="89487" i_length="611">
            <donor d_prob="0.150" d_score="0.52"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89486" g_stop="89473" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="64" r_length="14" r_score="0.643"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89472" i_stop="89238" i_length="235">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89237" g_stop="88699" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="603" r_length="539" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E735722" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735722" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="90147" e_stop="90098"/>
          <exon e_start="89486" e_stop="89473"/>
          <exon e_start="89237" e_stop="88699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTT</genome_strand>
        <mrna_strand>CCCCCCCCCCCCCCGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTT...........................................................................................................................................................................................................................................TTTTTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734069" ref_strand="-" ref_description="SGN-E734069 [LB11CG10]">
      <seq>ttttttttttttttttactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagttagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108159" stop="88399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89487" g_stop="89473" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.600"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89244" i_length="229">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89243" g_stop="88699" g_length="545"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="560" r_length="545" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E734069" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734069" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89487" e_stop="89473"/>
          <exon e_start="89243" e_stop="88699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTT.....................................................................................................................................................................................................................................TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715967" ref_strand="+" ref_description="SGN-E715967 [FB15DA10]">
      <seq>cgcatactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatcttagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccaaagaattactagtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88401" stop="89543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88699" g_stop="89240" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="545" polyA_stop="554"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E715967" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88699" e_stop="89240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA</genome_strand>
        <mrna_strand>CGCATACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTTAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614866" ref_strand="+" ref_description="SGN-E614866 [64658]">
      <seq>cacaactcaaaaatggcatcagctctgtttttctgcaccaactttccaaggtctcagaccactcaacaaacccactgactcttccctcttcctcaacaaacccatagccttcaaacctatcaccaaaaaaacccgaaatctcgctgtaaaagctgaactcaacccatcaattgtcatcagtttgagcactgggctttcacttttccttggaaggttcgttggctttaatttccagagagaaaatgtggcgaaacaagtgccgtctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaagtctaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaaccaaaaaaaaaaaaaaagtatgatgtgttttttttttaactgatttatgtgaaattgatgtggtttggtttgtaatgcagtagcttttatttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88401" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88699" g_stop="89225" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E614866" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88699" e_stop="89225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAACTCAAAAAATGGCATCAGCTCTG-TTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGT</genome_strand>
        <mrna_strand>CAC-AACTCAAA-AATGGCATCAGCTCTGTTTTTCTGCACCAACTTTCCAAGGTCTCAGACCACTCAACAAACCCACTGACTCTTCCCTCTTCCTCAACAAACCCATAGCCTTCAAACCTATCACCAAAAAAACCCGAAATCTCGCTGTAAAAGCTGAACTCAACCCATCAATTGTCATCAGTTTGAGCACTGGGCTTTCACTTTTCCTTGGAAGGTTCGTTGGCTTTAATTTCCAGAGAGAAAATGTGGCGAAACAAGTGCCGTCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAGTCTAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAA-CCAAAAAAAAAAAAAAAGTATGATGTGTTTTTTTTTTAACTGA-TTTATGTGAAATTGATGTGGTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733843" ref_strand="+" ref_description="SGN-E733843 [LB11AD06]">
      <seq>aacaaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88399" stop="89480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88699" g_stop="89177" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="480" polyA_stop="494"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E733843" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88699" e_stop="89177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACT</genome_strand>
        <mrna_strand>AACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738149" ref_strand="-" ref_description="SGN-E738149 [LC12CC08]">
      <seq>ttttttttccccccccccttagggggaaatggggcccccccccccccccccaggntttttttttttttttttttttttttttttttttttttttttntnnggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108171" stop="88401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95126" g_stop="95105" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.591"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95104" i_stop="91869" i_length="3236">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.711" a_score="0.48"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91868" g_stop="91798" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="91" r_length="70" r_score="0.521"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91797" i_stop="89238" i_length="2560">
            <donor d_prob="0.000" d_score="0.56"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89237" g_stop="88701" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="628" r_length="537" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E738149" ref_strand="-">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738149" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="95126" e_stop="95105"/>
          <exon e_start="91868" e_stop="91798"/>
          <exon e_start="89237" e_stop="88701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTTTCCTATCTTATTATAGTAACCTTTTCCTCTGGTATACTTGCTTGAACTACCATATATTATTTCCAACTATGTTATTTGACTGGACTATAGAGCCATTCAAATATACTTTATACCTTAAAAGGGTTCGTTTAGTATGATGGATAAGCGATAATTAATTTTAGGATTAATTTAAGGGTGAATTTATTTCATGCTTGATTGTGATAAAATGGCAGGATAAGTTATTCCGAAATAACTTGTTTCCCAACTAAACAAGCTCTAAAGAAATTAGATAAATATTCTACTTCTTACTCCATGGATACCTAATGATTATTTGGCCCTAAACAAGTCTTCATCATTGATCATGTCACTCCATTTAAAACATTGCTATACTTGATAAAATATTTTTTTTTCTTTCAAAAATAACATTTCATTGTCAGATTGAAATTCAAAGTTTATTTTTATCCTTAATTTTTACGAGTTCAAATTCACGAAATACAAGTCATCGAGAAGATTTGTGAGGAAAAAACAAAAAGTTGTTCTCTCGTCACTTTTTACTTTTTAATTGTTAAACTACATGAATTCAAGTATATTCTTTTACCATTGATATCAAGAAACATTGCAATTTATAGTTGTTTTTGTATAATTTTTTGAATATCTAAAATTTTAATTTTAAAAGTTTGTACATATTAATTTAATTTAGTTTTAAAGATTAATTCTCGACATGACAACTATTTAGACTCATATGGAAATATAGAAAATTGAAATATAGCATTAATATGTGGATTTGGGCGGTGTGAATAAGGCATGAATATGATCGGATCAAATACTACGAGTGAAAGAAATACATAACTAGTAAATGACTACTTAATTAAGGTAATAAATGACTATTTTCCATATTCAAAGTAAGAAATTAAATGCACACGGTAAAATAAAATAAAATTTTTGCAAAGAGTTTTGGTAAGTTTCATACTCTTTGACAAAAATCTACATTTAATTGGGTAAAGATTTTTAGTAAAATGAATGGGAGAATATCTATGAAGATAATTATCACTTTGAGAGTTCAAAACTATTTGAATTCACAAGAGTTTTCATTTGGTTAGGATACTCTCTTTCTTTTGTTTGATTGGTAGACGAATCTTAAAAGATTTACCTTCTAAACGCATTTTACAAAATAAATCATCAATAACAATCAACATAAATTAGAAAATATAAAATATTTATTAGGAAAAAATATATATACTCGACATGTTTAATCTTTAATTAATTAAAATATGTATTTTTTAATCACTTTATTAATTAAATAACTTACATTTGACTATAACAATATATTTTTTGTATATGCAACCTTATTCATGTTTTATCGATAGATCACTTAGACTCAAGTTTAACCTCATGTATACATGAATAATTACATAATCAAAATTTTAAAAGTATAATAATTACCTCAAAAAATAATAAAAATTTACAAAAAAAAATAAAATAAAAAGAAGGTGATTACACATTATCTGTTTTTTCCTACCCACGGCACGCCACAGTCAATGCCTCAGTTGAGAACGTGACAGTCAATTTTCCACACATTAGCAGTTTTAGAATGACTCTTCCTAATCCCTTCCCTCTCTTCCTCTTCTTCTTCTCATTTTCTCATATTAGTAATTATCTCTGCGTTTTTTAAGCTCATGAATTTTTTTTTTCCTCGCCATGACTTTCCTTTTCAGCTAAGTTACCTCCTTCTCATGAGCTCGTAGTTAACATATATATTTTTTCTATAAATTTTACTGTTTAGCTACAAAATTTGTTTATTCGCTTGTTATTCAAGTTGGCATGGGTACGTTACTGATAAATCAGATCTCGGAAAAGGAGGTGTTAGGAGATGAGAAAGATGATGTTATGGGATTTGGAGATGAAGATGAAATTTCGAAAGATAATAAGAGGAGGATTTGTCGTGTGTGTAAGAAAGTATTTGGTTCTGGTAAAGCATTAGGAGGTCACATGAGAATTCACGTTGAGTCTCGTTCTAAAAAGGAAAAATCAAAACCACGTGAAGAAGTGGATGTAGAAAATTGCAATAATGATGAGTTGGTACCAATTTGTAAAGTCTGTGGTAAGGTTTTTCCATCGATGAAATCGTTGTTTGGGCATATGAGATCTCATCCTGAACGGGAATGGAGAGGAATTCTTCCTCCTCATTTGAAATCTAACGATGTAAAAAAAGCGAAAAAAACAGCTTCTGTACCTGGATGGTCAGTTACAGCTAAGCGAGGGAGAAAGCCCAATGCTGAAGAAGAAGATGAACAATTGCAGGATGCTGTTCATCACCTTATGCTGCTCGCAAACGGAGATTCAATCGAGTCTGTTGTTACTGGACATGATCATACTCCTGAAGAAGAATTGGAGAAAACGAACAGTAATTCTCTTACTTCCAAAGCTGAAAATGAGGAATTTGTTTCTGAAGAATTGGATAGGAAGAAAAAGAAGAGGAAGTTGAGGCATCTGAATTCTGTACATGATAGTCCAGCTTCAGTTGCAGTTACAGCAACGCCTGAAAAATACGAGTGCAACACTTGTGGGAAAAGCTTCGCAACTCATCAAGCACTTGGTGGACATAAATCAAGTCACAATAAGTTGAGAATCGTAATCGAAAATTCCAACGATTCAATCATTGAAGAAGCAGCTGCTAGCAGCTCAAAGTTGTTGGGTGATAGCAAATTATCAACCACTGGAGGAAGAATTGCGGATTTTGATCTCAATGAATTGCCCTCTGATCATGACAATGAACTTGCTGGTAATCCTGATTACTTTCCCTTTTTTTCTATTTAACAATATTGAAGTCTTGAAGTTTGATCAATCGACTCCTCGGATGCTTTCTGCACCAGACTGTTATCGATAGTACATTAGTTTTAGTCTATATATCAGTTTAAATTTCTAATCATTGCAAAAATACTTAGTAATTAGCCATCTTGGTTACGTAGCTTGTGTTCTTTTTTCCTTGTTTAACATCCTTAGCTTAATTATGTGGTGTTTTGAAGTTGGGATTTGTTTGTTATTATCTTGATTGGAAGCATAATTGTCTAAACAAGCCTGCTGGAAAACACCAAATGTATATAAATATGCACAAGATTTCTTGGTTTATTAATTTAGTTTCGATTTCTCTCAGAATTGTTTTTGCTTGAATCGTCGATCTATAAAAAAACAACTCTCTTAAAGATCTGTTATAACTTCACTATCTCGGGTTTGTTATTATTATTGTTGATTTCTCCGTGACATATATTTAGGTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTTTGAATGAAAAATTATTACTATAAGTTGCATTTTAATATGATAAGAAAACTGAATTTCAAAATTTTGGTCAAAATTCACGTAATTTGAAACTTCGAATCTTGGTAAATTAAAAGCCATATATAGTTTGGGTCGGAAGGGGAGGTAGATGTGGTGTGATTGCTTGATTTCTTTTTCAAAAATAACCTTTCTGTCTCCGTTGTAAATCAATACAGTTTATATGTTATTGTTGTTGTAGTATTTAATAAGACTAAAAAAATAATGAAATCTCGATAAATTTAGTCAAACTTTATCATTTATTCTGATTAGGAAGAAAGAGAAATTCAAGGACACATAGAAGACCAAAGGAAATCTTTAAACAATTGGACTCTAAACTTTGGTTGCAAGTATATAACTATAAAAAAGAATGTGTAAATCCTTTTAACAAATTACTCCTTTCATCTCAAATCACTAGTGACGTTTTCGATATTTTGAAATGTATTTTTTATTATATTAATATTTGAGAATTAATTTTTTTGAATCTAGAATTTATCAAAAATTTAAGGTCAGATAAATATTCATTTTTTTTAGCTTCACTCGTGGAATTAAATTGAATATGGTATTATCATATTGATATTATATCGGGTACAATAGTGTCATATTGATATAAGAAGAACCATATTATAATATTGATATTATCATATTGATGTTATATTATCATATTGATATTATATTGGGTATAATAGTATCATATTGATAAAAGAAGAATCACAATTTAAAATACTTTTCAGAAAGATTTTGAATATTTAACTTTTAAATTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTACAATATTTTTCATGTAGTTTTTGAATATTAGTCTGTCCAATATAATTTTTCAAAAATTAGTTAAATTAACTTTTGAAAAGAAATGATATTTTGAGAGGTAGGGAAGTATTGTGATGATTGAATTGATATATTAGTTAATTTGTAAGTGTTCAAACCGTAAGTCACGGCTTAGGAAGAGGAATAGAAGGTCTTGTAAGAAGAGACTATAAAGGAGAAAAACCAAAAACACACACACACTATATATATATATATATATATATATATATATAATGCAAAAATCATTTTTTGTTGATATATTTACCTACGTGGGATCAGAAATTAGATGTATCCAGTATTTACACTGATAAACTAAATATAACATTTTACCATAACTAGCTAACATTTTACCATAACTAGCTATTGTAGAAACTATAGTTTAGTTTATCATAGCAAAACTATATACATATATACTTTGATTTAGAACAAGAAACTATTTTTTACAAGTTGAAAAATACATTTACTTTTTTAAACCTAGGCTAAATTAATTCTTTTTATATTAATTAGCCATACACAAACAAATTACAAAAGCTTTTCATATGACACCTATAGAGAAAATGAAGATGGTGACTAATTTTCCTTTTCTGAAAGATTATAATTCTGAAACATTTAGGAGGGAATTAACGGTAAAAAATATATGGTAAAGGCAAGAAATAAGTATTATTAAGTCCCAACTGTTTACTGCCCACATTCTCGTGACCATAATATATATGAAAGCGTCATTCCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</genome_strand>
        <mrna_strand>TTTTTTTTCCCCCCCCCCT-TA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGAAATG-GGGCCCCCCCCCCCCCCCCCAGGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTNTNNGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734048" ref_strand="-" ref_description="SGN-E734048 [LB11CE12]">
      <seq>ttttttttcccccccttttgggggaaatgggtccccccccccccccccgggttttttttttttttttttttttttttttttttttttttttttctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108168" stop="88401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92280" g_stop="92265" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="0.500"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92264" i_stop="91869" i_length="396">
            <donor d_prob="0.729" d_score="0.00"/>
            <acceptor a_prob="0.711" a_score="0.48"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91868" g_stop="91797" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="88" r_length="72" r_score="0.514"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91796" i_stop="89238" i_length="2559">
            <donor d_prob="0.000" d_score="0.54"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89237" g_stop="88701" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="625" r_length="537" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E734048" ref_strand="-">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734048" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="92280" e_stop="92265"/>
          <exon e_start="91868" e_stop="91797"/>
          <exon e_start="89237" e_stop="88701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTGCACCAGACTGTTATCGATAGTACATTAGTTTTAGTCTATATATCAGTTTAAATTTCTAATCATTGCAAAAATACTTAGTAATTAGCCATCTTGGTTACGTAGCTTGTGTTCTTTTTTCCTTGTTTAACATCCTTAGCTTAATTATGTGGTGTTTTGAAGTTGGGATTTGTTTGTTATTATCTTGATTGGAAGCATAATTGTCTAAACAAGCCTGCTGGAAAACACCAAATGTATATAAATATGCACAAGATTTCTTGGTTTATTAATTTAGTTTCGATTTCTCTCAGAATTGTTTTTGCTTGAATCGTCGATCTATAAAAAAACAACTCTCTTAAAGATCTGTTATAACTTCACTATCTCGGGTTTGTTATTATTATTGTTGATTTCTCCGTGACATATATTTAGGTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTTTGAATGAAAAATTATTACTATAAGTTGCATTTTAATATGATAAGAAAACTGAATTTCAAAATTTTGGTCAAAATTCACGTAATTTGAAACTTCGAATCTTGGTAAATTAAAAGCCATATATAGTTTGGGTCGGAAGGGGAGGTAGATGTGGTGTGATTGCTTGATTTCTTTTTCAAAAATAACCTTTCTGTCTCCGTTGTAAATCAATACAGTTTATATGTTATTGTTGTTGTAGTATTTAATAAGACTAAAAAAATAATGAAATCTCGATAAATTTAGTCAAACTTTATCATTTATTCTGATTAGGAAGAAAGAGAAATTCAAGGACACATAGAAGACCAAAGGAAATCTTTAAACAATTGGACTCTAAACTTTGGTTGCAAGTATATAACTATAAAAAAGAATGTGTAAATCCTTTTAACAAATTACTCCTTTCATCTCAAATCACTAGTGACGTTTTCGATATTTTGAAATGTATTTTTTATTATATTAATATTTGAGAATTAATTTTTTTGAATCTAGAATTTATCAAAAATTTAAGGTCAGATAAATATTCATTTTTTTTAGCTTCACTCGTGGAATTAAATTGAATATGGTATTATCATATTGATATTATATCGGGTACAATAGTGTCATATTGATATAAGAAGAACCATATTATAATATTGATATTATCATATTGATGTTATATTATCATATTGATATTATATTGGGTATAATAGTATCATATTGATAAAAGAAGAATCACAATTTAAAATACTTTTCAGAAAGATTTTGAATATTTAACTTTTAAATTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTTCAAATATTAAATTAGTCAAATTAACTTATGATTTATAACTTATACTACAATATTTTTCATGTAGTTTTTGAATATTAGTCTGTCCAATATAATTTTTCAAAAATTAGTTAAATTAACTTTTGAAAAGAAATGATATTTTGAGAGGTAGGGAAGTATTGTGATGATTGAATTGATATATTAGTTAATTTGTAAGTGTTCAAACCGTAAGTCACGGCTTAGGAAGAGGAATAGAAGGTCTTGTAAGAAGAGACTATAAAGGAGAAAAACCAAAAACACACACACACTATATATATATATATATATATATATATATATAATGCAAAAATCATTTTTTGTTGATATATTTACCTACGTGGGATCAGAAATTAGATGTATCCAGTATTTACACTGATAAACTAAATATAACATTTTACCATAACTAGCTAACATTTTACCATAACTAGCTATTGTAGAAACTATAGTTTAGTTTATCATAGCAAAACTATATACATATATACTTTGATTTAGAACAAGAAACTATTTTTTACAAGTTGAAAAATACATTTACTTTTTTAAACCTAGGCTAAATTAATTCTTTTTATATTAATTAGCCATACACAAACAAATTACAAAAGCTTTTCATATGACACCTATAGAGAAAATGAAGATGGTGACTAATTTTCCTTTTCTGAAAGATTATAATTCTGAAACATTTAGGAGGGAATTAACGGTAAAAAATATATGGTAAAGGCAAGAAATAAGTATTATTAAGTCCCAACTGTTTACTGCCCACATTCTCGTGACCATAATATATATGAAAGCGTCATTCCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</genome_strand>
        <mrna_strand>TTTTTTTTCCCCCCCT............................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGGGAAATGGGTCCCCCCCCCCCCCCCCGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736857" ref_strand="+" ref_description="SGN-E736857 [LC07CC11]">
      <seq>caaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccnnnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaanncccggggggggggggggggccccctttccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88401" stop="108174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88701" g_stop="89233" g_length="533"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89234" i_stop="91280" i_length="2047">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.60"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91281" g_stop="91320" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="573" r_length="40" r_score="0.600"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91321" i_stop="91827" i_length="507">
            <donor d_prob="0.000" d_score="0.60"/>
            <acceptor a_prob="0.682" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91828" g_stop="91865" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="611" r_length="38" r_score="0.421"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E736857" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88701" e_stop="89233"/>
          <exon e_start="91281" e_stop="91320"/>
          <exon e_start="91828" e_stop="91865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTCGCTGTGATGAATGGTTTCCAATAATGCCACGAGGCAGAGAGCCTTTCAACTGAAATAGATCTAATCGGATTGCTTGGTTCCCATTGCTTCAAAAATGAATTGAAAATAATATCTTAGAAGATGACTATATAAATTATAGCTCCATCACTTCGCGTAGGGATCCGTATGGTAGGATATATTAGAGAAAATAATACTGGTATTATCGAATTCCTTTTTTGATAGTGTTTTCAGAATTTTTAACCAAACTAAGTCATTATATAAAACAATTTACCAAAGTAATACATTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACGGTAACGTTTTAGGATATATTTTATTTTTTAAAAACTAACAGCATTAGGTTGATATATGTTACTGTAAGTAACGTTTTACTTTTAAAACGTTATTTTCAGTAACGTTTTACACCTAAAACGTTGCTGTGAGTAACGTTTTAGGAGTAAAACGTTACTGTGAGTAATGTATATCAATCTGACGCCATCAACTTTTAAAAAATAAAATATATCCTAAAACGTTACTGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAACATATTATTTTGGTGAATGACTTTATATAATGACTTAGTTTGGTTAAAACCTCGTGTTTTCAATAGTATAACTAGCTAATACATAATCTTACTTGTACGTCTTGTTCAACAGTATTCTTATCAATAATAAATCATGATATTAACAATACAAAACTTTTTCTAAGCTTTTTATTTCTAACATACGTTATTCAATATAATTTTTATACTTCATACCAAGCGATGATGAGAATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGACGCTTTCATATATATTATGGTCACGAGAATGTGGGCAGTAAACAGTTGGGACTTAATAATACTTATTTCTTGCCTTTACCATATATTTTTTACCGTTAATTCCCTCCTAAATGTTTCAGAATTATAATCTTTCAGAAAAGGAAAATTAGTCACCATCTTCATTTTCTCTATAGGTGTCATATGAAAAGCTTTTGTAATTTGTTTGTGTATGGCTAATTAATATAAAAAGAATTAATTTAGCCTAGGTTTAAAAAAGTAAATGTATTTTTCAACTTGTAAAAAATAGTTTCTTGTTCTAAATCAAAGTATATATGTATATAGTTTTGCTATGATAAACTAAACTATAGTTTCTACAATAGCTAGTTATGGTAAAATGTTAGCTAGTTATGGTAAAATGTTATATTTAGTTTATCAGTGTAAATACTGGATACATCTAATTTCTGATCCCACGTAGGTAAATATATCAACAAAAAATGATTTTTGCATTATATATATATATATATATATATATATATATAGTGTGTGTGTGTTTTTGGTTTTTCTCCTTTATAGTCTCTTCTTACAAGACCTTCTATTCCTCTTCCTAAGCCGTGACTTACGGTTTGAACACTTACAAATTAACTAATATATCAATTCAATCATCACAATACTTCCCTACCTCTCAAAATATCATTTCTTTTCAAAAGTTAATTTAACTAATTTTTGAAAAATTATATTGGACAGACTAATATTCAAAAACTACATGAAAAATATTGTAGTATAAGTTATAAATCATAAGTTAATTTGACTAATTTAATATTTGAAGTATAAGTTATAAATCATAAGTTAATTTGACTAATTTAATATTTGAAATTTAAAAGTTAAATATTCAAAATCTTTCTGAAAAGTATTTTAAATTGTGATTCTTCTTTTATCAATATGATACTATTATACCCAATATAATATCAATATGATAATATAACATCAATATGATAATATCAATATTATAATATGGTTCTTCTTATATCAATATGACACTATTGTACCCGATATAATATCAATATGATAATACCATATTCAATTTAATTCCACGAGTGAAGCTAAAAAAAATGAATATTTATCTGACCTTAAATTTTTGATAAATTCTAGATTCAAAAAAATTAATTCTCAAATATTAATATAATAAAAAATACATTTCAAAATATCGAAAACGTCACTAGTGATTTGAGATGAAAGGAGTAATTTGTTAAAAGGATTTACACATTCTTTTTTATAGTTATATACTTGCAACCAAAGTTTAGAGTCCAATTGTTTAAAGATTTCCTTTGGTCTTCTATGTGTCCTTGAATTTCTCTTTCTTCCTAATCAGAATAAATGATAAAGTTTGACTAAATTTATCGAGATTTCATTATTTTTTTAGTCTTATTAAATACTACAACAACAATAACATATAAACTGTATTGATTTACAACGGAGACAGAAAGGTTATTTTTGAAAAAGAAATCAAGCAATCACACCACATCTACCTCCCCTTCCGACCCAAACTATATATGGCTTTTAATTTACCAAGATTCGAAGTTTCAAATTACGTGAATTTTGACCAAAATTTTGAAATTCAGTTTTCTTATCATATTAAAATGCAACTTATAGTAATAATTTTTCATTCAAAAATTAATCAAAATTAACTATTGTAAAGTAAAAAGCCAGCAAATGGAGAAAGTAGCCCTCAAACAC</genome_strand>
        <mrna_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCNNNNA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAANNCCCGGGGGGGGGGGGGGGGCCCCCTTTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732195" ref_strand="-" ref_description="SGN-E732195 [LB01CB04]">
      <seq>tttttttcccccccccttagggggggaggggggccccccccccccccccgganttttttttttttttttttttttttttttttttttttttttttttttttttntggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108176" stop="88401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90183" g_stop="90098" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.419"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90097" i_stop="89489" i_length="609">
            <donor d_prob="0.150" d_score="0.50"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89488" g_stop="89473" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="102" r_length="16" r_score="0.625"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89472" i_stop="89232" i_length="241">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89231" g_stop="88701" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="633" r_length="531" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E732195" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732195" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="90183" e_stop="90098"/>
          <exon e_start="89488" e_stop="89473"/>
          <exon e_start="89231" e_stop="88701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCTCGTGACCATAATATATATGAAAGCGTCATTCCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTGGTATGAAGTATAAAAATTATATTGAATAACGTATGTTAGAAATAAAAAGCTTAGAAAAAGTTTTGTATTGTTAATATCATGATTTATTATTGATAAGAATACTGTTGAACAAGACGTACAAGTAAGATTATGTATTAGCTAGTTATACTATTGAAAACACGAGGTTTTAACCAAACTAAGTCATTATATAAAGTCATTCACCAAAATAATATGTTTTTCTAAATTTTTACAAAACTAGTATAAACGTATTTCACAGTAACGTTTTAGGATATATTTTATTTTTTAAAAGTTGATGGCGTCAGATTGATATACATTACTCACAGTAACGTTTTACTCCTAAAACGTTACTCACAGCAACGTTTTAGGTGTAAAACGTTACTGAAAATAACGTTTTAAAAGTAAAACGTTACTTACAGTAACATATATCAACCTAATGCTGTTAGTTTTTAAAAAATAAAATATATCCTAAAACGTTACCGTGAAATACGTTTATACTAGTTTTGTAAAAATTTAGAAAAATGTATTACTTTGGTAAATTGTTTTATATAATGACTTAGTTTGGTTAAAAATTCTGAAAACACTATCAAAAAAGGAATTCGATAATACCAGTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</genome_strand>
        <mrna_strand>TTTTTTTCCCCCCCCCTTAGGGGGGGAGGGGGGCCCCCCCCCCCCCCCCGGANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTTTTTTTT.................................................................................................................................................................................................................................................TNTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740988" ref_strand="-" ref_description="SGN-E740988 [LC23DA11]">
      <seq>ttttttttttttttttactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagtatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108159" stop="88402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89487" g_stop="89473" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.600"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89244" i_length="229">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89243" g_stop="88701" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="558" r_length="543" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E740988" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740988" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89487" e_stop="89473"/>
          <exon e_start="89243" e_stop="88701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTT.....................................................................................................................................................................................................................................TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738530" ref_strand="-" ref_description="SGN-E738530 [LC14AB01]">
      <seq>ttttttttttttttttactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108159" stop="88401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89487" g_stop="89473" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.600"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89244" i_length="229">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89243" g_stop="88701" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="558" r_length="543" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E738530" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738530" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89487" e_stop="89473"/>
          <exon e_start="89243" e_stop="88701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTT.....................................................................................................................................................................................................................................TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711906" ref_strand="+" ref_description="SGN-E711906 [FB03BD04]">
      <seq>catactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccaaagaattactagtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88401" stop="89543"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88701" g_stop="89240" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="543" polyA_stop="557"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E711906" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E711906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88701" e_stop="89240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA</genome_strand>
        <mrna_strand>CATACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732609" ref_strand="+" ref_description="SGN-E732609 [LB02CF03]">
      <seq>caaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88401" stop="89480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88701" g_stop="89177" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="478" polyA_stop="491"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E732609" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88701" e_stop="89177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACT</genome_strand>
        <mrna_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732674" ref_strand="+" ref_description="SGN-E732674 [LB02DC10]">
      <seq>caaactcaaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88401" stop="89480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88701" g_stop="89175" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="476" polyA_stop="489"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E732674" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88701" e_stop="89175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTA</genome_strand>
        <mrna_strand>CAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738663" ref_strand="-" ref_description="SGN-E738663 [LC14CB03]">
      <seq>ttttttttttttttttactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacagagctgatgccattttttgagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108159" stop="88403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89487" g_stop="89473" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.600"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89244" i_length="229">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89243" g_stop="88702" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="557" r_length="542" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E738663" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738663" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89487" e_stop="89473"/>
          <exon e_start="89243" e_stop="88702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTT.....................................................................................................................................................................................................................................TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614407" ref_strand="+" ref_description="SGN-E614407 [64193]">
      <seq>ctaaatccccaacctccacacaactcaaaaatggcatcagctctgtttttccttgcaccaactttccaaggtctcagaccactcaacaaacccactgactcttccctcttcctcaacaaacccatagccttcaaacctatcaccaaaaaaacccgaaatctcgctgtaaaagctgaactcaacccatcaattgtcatcagtttgagcactgggctttcacttttccttggaaggttcgttttctttaatttccagagagaaaatgtggcgaaacaagtgccgtctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaagtctaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaaccaaaaaaaaaaaaaaagtatgatgtgtttttttttttaactgattctatgtgaaattgaaaaaacaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88398" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88702" g_stop="89213" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="534" r_length="514" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E614407" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88702" e_stop="89213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCAAAAAATGGCATCAGCTCTG-TTTT-C-TGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATG-TGTTTTTGTTAACTGATTTTATGTGAAATTC</genome_strand>
        <mrna_strand>CAACTCAAAAA-TGGCATCAGCTCTGTTTTTCCTTGCACCAACTTTCCAAGGTCTCAGACCACTCAACAAACCCACTGACTCTTCCCTCTTCCTCAACAAACCCATAGCCTTCAAACCTATCACCAAAAAAACCCGAAATCTCGCTGTAAAAGCTGAACTCAACCCATCAATTGTCATCAGTTTGAGCACTGGGCTTTCACTTTTCCTTGGAAGGTTCGTTTTCTTTAATTTCCAGAGAGAAAATGTGGCGAAACAAGTGCCGTCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAGTCTAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAA-CCAAAAAAAAAAAAAAAGTATGATGTGTTTTTTTTTTTAACTGATTCTATGTGAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465862" ref_strand="+" ref_description="SGN-E465862 [cPRO-22-B3]">
      <seq>caaacctccacacaactcaaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagaccactcaacaaacccactgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaacccgaaatctcgctgtgaaagctgaactcaacccatcaattgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttctttaatttccagagagaaaatgtagcgaaacaagtgccgtctcagaacggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgctaaaatctaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaaccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88398" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88702" g_stop="89166" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="476" r_length="464" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E465862" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88702" e_stop="89166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAA</genome_strand>
        <mrna_strand>CAACTCAAAAA-TGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCACTCAACAAACCCACTGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAAACCCGAAATCTCGCTGTGAAAGCTGAACTCAACCCATCAATTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTTAATTTCCAGAGAGAAAATGTAGCGAAACAAGTGCCGTCTCAGAACGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGCTAAAATCTAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E408573" ref_strand="+" ref_description="SGN-E408573 [PPI-11-D7]">
      <seq>caaaaatggcatcagctctgttttctgcaccaactttccaaggtctcagaccactcaacaaacccactgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaacccgaaatctcgctgtgaaagctgaactcaacccatcaattgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttctttaatttccagagagaaaatgtagcgaaacaagtgccgtctcagaacggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgctaaaatctaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaaccaaaaaaaaaaaagtatgatgtgttttttttttaactgatttatatgaaattgatgtggttttgtttgtaatgcagtagcttttatttgtatagtgccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88409" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88708" g_stop="89225" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="547" polyA_stop="558"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E408573" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E408573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88708" e_stop="89225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGT</genome_strand>
        <mrna_strand>CAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCACTCAACAAACCCACTGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAAACCCGAAATCTCGCTGTGAAAGCTGAACTCAACCCATCAATTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTTAATTTCCAGAGAGAAAATGTAGCGAAACAAGTGCCGTCTCAGAACGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGCTAAAATCTAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTG-A-ACCAAA-AAAAA-AAAAGTATGATGTGTTTTTTTTTTAACTGA-TTTATATGAAATTGATGTGGTTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732434" ref_strand="-" ref_description="SGN-E732434 [LB02AF08]">
      <seq>ttttttttttttttttttttttttttttctnnggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggtttgttgaggaagagggaagagtcggtgggtttgttgagaggtctgagaccttggaaagttggtgcagaaaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108162" stop="88425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89489" g_stop="89473" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="0.588"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89244" i_length="229">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89243" g_stop="88725" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="536" r_length="519" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E732434" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732434" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89489" e_stop="89473"/>
          <exon e_start="89243" e_stop="88725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTT.....................................................................................................................................................................................................................................TTTTTTTTTTTCTNNGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723212" ref_strand="+" ref_description="SGN-E723212 [FC19DB03]">
      <seq>ctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactatatgtgtttttgttaactgattttatgtgaaattcatgtggttttgtgccaaagaattactagtactatctctgttttcttttgcatttgaattcgactatgcatccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88425" stop="89591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88725" g_stop="89295" g_length="571"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="571" r_length="571" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E723212" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88725" e_stop="89295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTC</genome_strand>
        <mrna_strand>CTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732545" ref_strand="+" ref_description="SGN-E732545 [LB02BH05]">
      <seq>ctgttttctgcaccaactttccaaggtctcagacctctcaacaaacccaccgactcttccctcttcctcaacaaacccatcgccttcaaacctatcaccaaaaaaccccgaaatctcgctgtgaaagctgaactcaatccatccgttgtcatcagtttgagcactgggctttcgcttttccttggaaggttcgttttcttcaatttccagagagaaaatgtagcgaaacaggtgccatctcagaatggaatttctcactttgaagctggagatgttagggctaaggaatatataagtttgttaaaatcaaatgatccagttggattcaatattgttgatgtgcttgcttggggatctattggacatattgttgcttattatatccttgctacttctagcaatggatatgatcccagtttctttggctgaatatcaaacaaaaatatatttactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="88425" stop="89480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88725" g_stop="89177" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="454" polyA_stop="463"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E732545" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88725" e_stop="89177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACT</genome_strand>
        <mrna_strand>CTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E221023" ref_strand="-" ref_description="SGN-E221023 [cLEL-22-K16](-)">
      <seq>tttttttttttttttttatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagatttcggggttttttggtgataggtttgaaggcgatgggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108159" stop="88497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89488" g_stop="89473" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="0.625"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89181" i_length="292">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89180" g_stop="88797" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="400" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E221023" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E221023" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89488" e_stop="89473"/>
          <exon e_start="89180" e_stop="88797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTT....................................................................................................................................................................................................................................................................................................TATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220870" ref_strand="-" ref_description="SGN-E220870 [cLEL-22-K16](-)">
      <seq>tttttttttttttttttatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattccttagccctaacatctccagcttcaaagtgagaaattccattctgagatggcacctgtttcgctacattttctctctggaaattgaagaaaacgaaccttccaaggaaaagcgaaagcccagtgctcaaactgatgacaacggatggattgagttcagctttcacagcgagattcggggttttttggtgataggtttgaaggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108159" stop="88505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89488" g_stop="89473" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="0.625"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89472" i_stop="89181" i_length="292">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89180" g_stop="88805" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="391" r_length="375" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E220870" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220870" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="89488" e_stop="89473"/>
          <exon e_start="89180" e_stop="88805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTATTTTCTCTAATATATCCTACCATACGGATCCCTACGCGAAGTGATGGAGCTATAATTTATATAGTCATCTTCTAAGATATTATTTTCAATTCATTTTTGAAGCAATGGGAACCAAGCAATCCGATTAGATCTATTTCAGTTGAAAGGCTCTCTGCCTCGTGGCATTATTGGAAACCATTCATCACAGCGAAATTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTT....................................................................................................................................................................................................................................................................................................TATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGA-TTCGGGGTTTTTTGGTGATAGGTTTGAAGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E284749" ref_strand="+" ref_description="SGN-E284749 [cLES-3-O21]">
      <seq>ttttggatgcatagtcgaattcaaatgcaaaagaaaacagagatagtactagtaattctttggcacaaaaccacatgaatttcacataaaatcagttaacaaaaacacatatagtaaatatatttttgtttgatattcagccaaagaaactgggatcatatccattgctagaagtagcaaggatataataagcaacaatatgtccaatagatccccaagcaagcacatcaacaatattgaatccaactggatcatttgattttaacaaacttatatattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="89589" stop="88709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89289" g_stop="89009" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E284749" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>281</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89289" e_stop="89009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCC</genome_strand>
        <mrna_strand>TTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E424701" ref_strand="-" ref_description="SGN-E424701 [STM-44-A1]">
      <seq>atttccaggctgctcaagaagctcttgctaatgaaattcagaaattcaaagaaattgggaaagatactacctttggtcattcgcttgaggatgttggtataccttcaaatttcacttcagatgactcaaatttccctagaccaagcacatccgtgctgtcacagaacagagatggtgctcaacattctctcaactccttggagtctgaagtgtttagcctaaagcagaatatattactgttgcaaaacaaggttcagaaggcagctgacctggttatatccaaggaagcaagaattactgaacttgaagccattttaggtagtagctcaaagagtgaagaagagactattgaaagtgagttcgaggttctctttagacagaaaattgaagctgaagttcagtatttggcattatcaacaacagcccaaaagttgagaagtgcagcagtggatcaacttaccctcttggaagaacagaagacattagcttcagaacaagcacagatggtgcacgtgcttggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaagttactgtgaagatttagcaagcactgctgaaaagctaatgctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttgttgttgttggccgctgtcgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttaaaaaaaaaaaaaaaagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="98506" stop="63460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98206" g_stop="98174" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.974" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96531" g_stop="95810" g_length="722"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="755" r_length="722" r_score="0.949"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95809" i_stop="95176" i_length="634">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.664" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95175" g_stop="95156" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="775" r_length="20" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E424701" ref_strand="-">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E424701" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98206" e_stop="98174"/>
          <exon e_start="96531" e_stop="95810"/>
          <exon e_start="95175" e_stop="95156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAGGCTGTGCACTTTGAAGTTTTTTAACCTGGTCTCATATCAATACGACTTTAGACATTTCTGTTCGTGTGTGATGAACTATGTAATGGTCTAATTGGATTGTTGGAGTTGCAGAAACCTATACAACTTCAGACATTTCGGTTTGAAGTTGAAGCAAAAATGGTATGCACATGAAACATTCAACCACATGGTTGTTGAAGCTCATGTAGAAAAGCAAGCCTGAACTTCAGCCATACGAAACTTGTCCATGTATGACTTAAATGGTGATCCCGAGATCGGGTATCTGGCACATACTTGGACCTAACTATGTCTCTTATCCATGGCCTATTTTTAAGATTGCTAGTGTTTAAGTATGAAAAATATTGAAATATTAAAGTAGATAGTAAATTACAGGTAGTTGATCAGTTATGTATAATTTTCCTTCTAAGGAATTACGTGTGGTATTTTTTTATTTACTTTAGAAGGAGAATACAATCTGGCC</genome_strand>
        <mrna_strand>ATTTCCAGGCTGCTCAAGAAGCTCTTGCTAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGAAATTCAAAGAAATTGGGAAAGATACTACCTTTGGTCATTCGCTTGAGGATGTTGGTATACCTTCAAATTTCACTTCAGATGACTCAAATTTCCCTAGACCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAACATTCTCTCAACTCCTTGGAGTCTGAAGTGTTTAGCCTAAAGCAGAATATATTACTGTTGCAAAACAAGGTTCAGAAGGCAGCTGACCTGGTTATATCCAAGGAAGCAAGAATTACTGAACTTGAAGCCATTTTAGGTAGTAGCTCAAAGAGTGAAGAAGAGACTATTGAAAGTGAGTTCGAGGTTCTCTTTAGACAGAAAATTGAAGCTGAAGTTCAGTATTTGGCATTATCAACAACAGCCCAAAAGTTGAGAAGTGCAGCAGTGGATCAACTTACCCTCTTGGAAGAACAGAAGACATTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTTGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAAGTTACTGTGAAGATTTAGCAAGCACTGCTGAAAAGCTAATGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGTTGTTGTTGGCCGCTGTCGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321297" ref_strand="+" ref_description="SGN-E321297 [cTOB-23-M18]">
      <seq>tcagaacaagcacagatggtgcacgtgctaggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaacttactgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagatagctgaaatacctacttctcattttgctgagtctgtattcaagggtaatcatagaagatgatccgttttttgcttctgtagaaggctgtgcactttgaagttttttaacctggtctcatatcaatacgactttagacatttctgttcgtgtgtgatgaactatgtaatggtctaattggattgttggagttgcacaaacctatacaacttcagacatttcngtttgaagttgaagcaggaatggtatgcacatgaaacattcaaccacatggttgttgaagctcatgtagaaaaagcagcctgaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96376" stop="95110"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96076" g_stop="95410" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E321297" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E321297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96076" e_stop="95410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAGGCTGTGCACTTTGAAGTTTTTTAACCTGGTCTCATATCAATACGACTTTAGACATTTCTGTTCGTGTGTGATGAACTATGTAATGGTCTAATTGGATTGTTGGAGTTGCAGAAACCTATACAACTTCAGACATTTCGGTTTGAAGTTGAAGCAAAAATGGTATGCACATGAAACATTCAACCACATGGTTGTTGAAGCTCATGTAGAAAAGCAAGCCTGAACTT</genome_strand>
        <mrna_strand>TCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAGAAGGCTGTGCACTTTGAAGTTTTTTAACCTGGTCTCATATCAATACGACTTTAGACATTTCTGTTCGTGTGTGATGAACTATGTAATGGTCTAATTGGATTGTTGGAGTTGCACAAACCTATACAACTTCAGACATTTCNGTTTGAAGTTGAAGCAGGAATGGTATGCACATGAAACATTCAACCACATGGTTGTTGAAGCTCATGTAGAAAAAGCAGCCTGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376654" ref_strand="+" ref_description="SGN-E376654 [TUS-18-I24](-)">
      <seq>ttaagtagtagctcaaagagtgaagaagagactactgaaggtgagttcgagagtctcttcagactgaaaattgaagctgaagttcagtatgtggcattgtcaacaacagcacaaaagttgagaagtgcagcagtatatcaacttaccctcttggaagaacagaagacactagcttcagaacaagcacagatggtgcacgtgctaggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaacttactgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagatagctgaaatacctacttctcattttgctgagtctgtattcaagggtaatcatagaagatgatccgttttttgcttctgtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96550" stop="95335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96250" g_stop="95628" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="623" r_length="623" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E376654" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96250" e_stop="95628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAGGCTGTG</genome_strand>
        <mrna_strand>TTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376655" ref_strand="+" ref_description="SGN-E376655 [TUS-18-I24]">
      <seq>taagtagtagctcaaagagtgaagaagagactactgaaggtgagttcgagagtctcttcagactgaaaattgaagctgaagttcagtatgtggcattgtcaacaacagcacaaaagttgagaagtgcagcagtatatcaacttaccctcttggaagaacagaagacactagcttcagaacaagcacagatggtgcacgtgctaggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaacttactgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagatagctgaaatacctacttctcattttgctgagtctgtattcaagggtaatcatagaagatgatccgttttttgcttctgtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96549" stop="95335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96249" g_stop="95628" g_length="622"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="622" r_length="622" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E376655" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96249" e_stop="95628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAGGCTGTG</genome_strand>
        <mrna_strand>TAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E537670" ref_strand="+" ref_description="SGN-E537670 [TUS-56-G8](-)">
      <seq>tgcaaaaccaggttcaggaggcagctgacctggctaaatccaaggaagcaagagttactgaacttgaaccctttttaagtagtagctcaaagagtgaagaagagactactgaaggtgagttcgagagtctcttcagactgaaaattgaagctgaagttcagtatgtggcattgtcaacaacagcccaaaagttgagaagtgcagcagtatatcaacttcccctcttggaagaacagaagacactagtttcagaacaagcccagatggtgcacgtgttaggagatgccgaagcaaaggctgtagtgctcaagacccaaaccaagaagttggaaacttcctgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttttgatgcagatatctcctgatcatgctgaacttgtacccccctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagatagctgaaatacctacttctcattttgctgagtctgtattcaagggtaatcatagaagatgatccgttttttgcttctgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96624" stop="95335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96324" g_stop="95634" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="691" r_length="691" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="692" polyA_stop="732"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E537670" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E537670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96324" e_stop="95634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAG</genome_strand>
        <mrna_strand>TGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAACCCTTTTTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCCCAAAAGTTGAGAAGTGCAGCAGTATATCAACTTCCCCTCTTGGAAGAACAGAAGACACTAGTTTCAGAACAAGCCCAGATGGTGCACGTGTTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACCCAAACCAAGAAGTTGGAAACTTCCTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTTTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCCCCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389740" ref_strand="+" ref_description="SGN-E389740 [TUS-4-C12]">
      <seq>ttaagtagtagctcaaagagtgaagaagagactactgaaggtgagttcgagagtctcttcagactgaaaattgaagctgaagttcagtatgtggcattgtcaacaacagcacaaaagttgagaagtgcagcagtatatcaacttaccctcttggaagaacagaagacactagcttcagaacaagcacagatggtgcacgtgctaggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaacttactgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagatagctgaaatacctacttctcattttgctgagtctgtattcaagggtaatcatagaagatgatccgttttttgcttctgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96550" stop="95335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96250" g_stop="95634" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="617" r_length="617" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E389740" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96250" e_stop="95634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAG</genome_strand>
        <mrna_strand>TTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231732" ref_strand="+" ref_description="SGN-E231732 [cLED-4-B8]">
      <seq>taagtagtagctcaaagagtgaagaagagactactgaaggtgagttcgagagtctcttcagactgaaaattgaagctgaagttcagtatgtggcattgtcaacaacagcacaaaagttgagaagtgcagcagtatatcaacttaccctcttggaagaacagaagacactagcttcagaacaagcacagatggtgcacgtgctaggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaacttactgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagatagctgaaatacctacttctcattttgctgagtctgtattcaagggtaatcatagaagatgatccgttttttgcttctgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96549" stop="95335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96249" g_stop="95634" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="616" r_length="616" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E231732" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96249" e_stop="95634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAG</genome_strand>
        <mrna_strand>TAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E389476" ref_strand="+" ref_description="SGN-E389476 [TUS-4-C12](-)">
      <seq>ttaagtagtagctcaaagagtgaagaagagactactgaaggtgagttcgagagtctcttcagactgaaaattgaagctgaagttcagtatgtggcattgtcaacaacagcacaaaagttgagaagtgcagcagtatatcaacttaccctcttggaagaacagaagacactagcttcagaacaagcacagatggtgcacgtgctaggagatgccgaagcaaaggctgtagtgctcaagacacaaaccaagaagttggaaacttactgtgaagatttagcaagcactgccgaaaagctaaagctacagaagaaagtctgtaagtacagttcgtgttttttcatacagttggtgttgttggctgttgttgttggactgtttctgatgcagatatctcctgatcatgctgaacttgtacccacctaatgttagagaagtttctttctctctctttttttcttccactccctattatcaacatcgtcatccttcaatgttgaaagttagattagtttgttttttagatgtctatagataggagaaatacctacttctcattttgctgagtcagtattcaagggtatcatgaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="96550" stop="95360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96250" g_stop="95660" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E389476" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96250" e_stop="95660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGA</genome_strand>
        <mrna_strand>TTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGGAGAAATACCTACTTCTCATTTTGCTGAGTCAGTATTCAAGGGT-ATCAT-GAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590488" ref_strand="+" ref_description="SGN-E590488 [44085]">
      <seq>ctaaaacaaactaatctaactttcaacattgaaggatgacgatgttgataatagggagagaaaaaaaaaagagaaagaaagaaacttctctaacattaggtgggtacaagttcagcatgatcaggagatatctgcatcagaaacagtccaacgacagcggccaacaacaacaactgtatgaaaaaacacgaactgtacttacagactttcttctgtagctttagcttttcagcagtgcttgctaaatcttcacagtaactttccaacttcttggtttgtgtcttgagcactacagcctttgcttcggcatctcctagcacgtgcaccatctgtgcttgttctgaagctaatgtcttctgttcttccaagagggtaagttgatccactgctgcacttctcaacttttgggctgttgttgataatgccaaatactgaacttcagcttcaattttctgtctgaagagaacctcgaactcactttcaatagtctcttcttcactctttgagctactacctaaaatggcttcaagttcagtaattcttgcttccttggatataaccaggtcagctgccttctgaaccttgttttgcaacagtaatatattctgctttaggctaaacacttcagactccaaggagttaagagaatgttgagcaccatctctgttctgtgacagcacggatgtgcttggtctagggaaatttgagtcatctgaagtgaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="95434" stop="96759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95732" g_stop="96459" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E590488" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95732" e_stop="96459"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAACAAACTAATCTAACTTTCAACATTGAAGGATGACGATGTTGATAATAGGGAGTGGAAGAAAAAAAGAGAGAGAAAGAAACTTCTCTAACATTAGGTGGGTACAAGTTCAGCATGATCAGGAGATATCTGCATCAGAAACAGTCCAACAACAACAGCCAACAACACCAACTGTATGAAAAAACACGAACTGTACTTACAGACTTTCTTCTGTAGCTTTAGCTTTTCGGCAGTGCTTGCTAAATCTTCACAGTAAGTTTCCAACTTCTTGGTTTGTGTCTTGAGCACTACAGCCTTTGCTTCGGCATCTCCTAGCACGTGCACCATCTGTGCTTGTTCTGAAGCTAGTGTCTTCTGTTCTTCCAAGAGGGTAAGTTGATATACTGCTGCACTTCTCAACTTTTGTGCTGTTGTTGACAATGCCACATACTGAACTTCAGCTTCAATTTTCAGTCTGAAGAGACTCTCGAACTCACCTTCAGTAGTCTCTTCTTCACTCTTTGAGCTACTACTTAAAATGGCTTCAAGTTCAGTAACTCTTGCTTCCTTGGATTTAGCCAGGTCAGCTGCCTCCTGAACCTGGTTTTGCAACAGTAATATATTCTGCTTTAGGCTATACACTTCAGACTCCAAGGAGTTAAGAGAACTTTGAGCACCATCTCTGTTCTGTGACAGCACGGATGTGCTTGATCTAGGAAAATCTGAGTCATCTGACGTGAAATTTG</genome_strand>
        <mrna_strand>CTAAAACAAACTAATCTAACTTTCAACATTGAAGGATGACGATGTTGATAATAGGGAG-AGAAAAAAAAAAGAGAAAGAAAGAAACTTCTCTAACATTAGGTGGGTACAAGTTCAGCATGATCAGGAGATATCTGCATCAGAAACAGTCCAACGACAGCGGCCAACAACAACAACTGTATGAAAAAACACGAACTGTACTTACAGACTTTCTTCTGTAGCTTTAGCTTTTCAGCAGTGCTTGCTAAATCTTCACAGTAACTTTCCAACTTCTTGGTTTGTGTCTTGAGCACTACAGCCTTTGCTTCGGCATCTCCTAGCACGTGCACCATCTGTGCTTGTTCTGAAGCTAATGTCTTCTGTTCTTCCAAGAGGGTAAGTTGATCCACTGCTGCACTTCTCAACTTTTGGGCTGTTGTTGATAATGCCAAATACTGAACTTCAGCTTCAATTTTCTGTCTGAAGAGAACCTCGAACTCACTTTCAATAGTCTCTTCTTCACTCTTTGAGCTACTACCTAAAATGGCTTCAAGTTCAGTAATTCTTGCTTCCTTGGATATAACCAGGTCAGCTGCCTTCTGAACCTTGTTTTGCAACAGTAATATATTCTGCTTTAGGCTAAACACTTCAGACTCCAAGGAGTTAAGAGAATGTTGAGCACCATCTCTGTTCTGTGACAGCACGGATGTGCTTGGTCTAGGGAAATTTGAGTCATCTGAAGTGAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264713" ref_strand="+" ref_description="SGN-E264713 [cLEG-72-H15]">
      <seq>gaaaatgtgtcaaaagaagatctagctgctgaatctccgtgggatgttaatgaagagaagagtgagaatcacggttcatccactgatcacgagcctctaacggaatctatcttcaacttccatgctgctcaagaagctcttgctagtgaaattcagaaattcaaagaaatagggaaagatactaactttggtcattcacttgaggatgttggtataccttcaaatttcacgtcagatgactcagattttcctagatcaagcacatccgtgctgtcacagaacagagatggtgctcaaagttctcttaactccttggagtctgaagtgtatagcctaaagcagaatatattactgttgcaaaaccaggttcaggaggcagctgacctggctaaatccaaggaagcaagagttactgaacttgaagccattttaagtagtagctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="98621" stop="95933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98321" g_stop="98174" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96531" g_stop="96233" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="447" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E264713" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98321" e_stop="98174"/>
          <exon e_start="96531" e_stop="96233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAGCTCAAAG</genome_strand>
        <mrna_strand>GAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAGCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465081" ref_strand="+" ref_description="SGN-E465081 [cPRO-20-C23]">
      <seq>gtaacagttcaggcggctaataatttcccaaattcgttccgaattctagggtttccataatcccaattctattcgaattcatcaaaatctcttggaaatccagcacaataatgaatgaaaagggtgactttgctacaagtaatggtacaaaaggtgaaaggtcaatgatctatgatggagaatccagtgatgaagctcaggacagagaaagaccaattggtgaggaacttcgggctggtctcgagagagggaatgatagggagtctgaaaatgtgtcacaagaagatctagctgctgaatctccgtgggaagttaatgaagagaagagtgagaatcgcggttcatccactgatcacgatcctctaacggaatctatcttcaatttccaggctgctcaagaagctcttgctaatgaaattcagaaattcaaagaaatcgggaaagatactacctttggtcattcgcttgaggatgttggtataccttcaaatttcacttcagatgactcaaatttccctagaccaagcacatccgtgctgtcacagaacagagatggtgctcaacattctcttaactccttggagtctgaagtgtttagcctaaagcagaatatattactgttgcaaaacaaggttcagaaggcagctgacctggttatatccaaggaagcaagaattaccgaacttgaagccattttaggtagtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99921" stop="95940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99621" g_stop="99508" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.798"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042">
            <donor d_prob="0.998" d_score="0.60"/>
            <acceptor a_prob="0.943" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98465" g_stop="98174" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="414" r_length="292" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.974" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96531" g_stop="96240" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="706" r_length="292" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E465081" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99621" e_stop="99508"/>
          <exon e_start="98465" e_stop="98174"/>
          <exon e_start="96531" e_stop="96240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACAGTTCAGGCGGCTATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAA-T--T-----TCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTGAGTGATGGATTTGGTGTAATAGGTGACTCTGGTTTGGCTATGGGGCCTAATTTTATTGCTGTATCGGAATCAGAGAACAGCGAGGATCGGAGTAGTAGGTCTTCTACTGCAGCTAGTGCTCCAAAGGCAAGGTATGAAGCACCTGTGCACCTTGGTTATCCATCTGACAAGCATTGGTTGAGGAGTTTGAGTGGGAAGAGCTTGAGCACATCAGCTCAGAAACCACATCAGAGAAAAGGTCGGGCTGAAACTTGTAAAAAGCCTAGAGGAGAAAGGGTCAAAATCGAGAAGGAAAACTCTCATTCCAGCATGGAATCTGACTCGCGAAGCTCTAATTTCCTCTTTATGCAGGGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAG</genome_strand>
        <mrna_strand>GTAACAGTTCAGGCGGCTAATAATTTCCCAAATTCGTTCCGAATTCTAGGGTTTCCATAATCCCAATTCTATTCGAATTCATCAAAATCTCTTGGAAATCCAGCACAATAATGAATGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGATCTATGATGGAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGACCAATTGGTGAGGAACTTCGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCACAAGAAGATCTAGCTGCTGAATCTCCGTGGGAAGTTAATGAAGAGAAGAGTGAGAATCGCGGTTCATCCACTGATCACGATCCTCTAACGGAATCTATCTTCAATTTCCAGGCTGCTCAAGAAGCTCTTGCTAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGAAATTCAAAGAAATCGGGAAAGATACTACCTTTGGTCATTCGCTTGAGGATGTTGGTATACCTTCAAATTTCACTTCAGATGACTCAAATTTCCCTAGACCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAACATTCTCTTAACTCCTTGGAGTCTGAAGTGTTTAGCCTAAAGCAGAATATATTACTGTTGCAAAACAAGGTTCAGAAGGCAGCTGACCTGGTTATATCCAAGGAAGCAAGAATTACCGAACTTGAAGCCATTTTAGGTAGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213688" ref_strand="+" ref_description="SGN-E213688 [cLEC-76-J1]">
      <seq>tcccaattctagggtttccataatctcaattctcttcgaatttctcttggaaatccagcagaataatgaatgaaaagggtgactttgctacaagtaatggtacaaaaggtgaaaggtcaatgaactatgatgaagaatccagtgatgaagctcaggacagagaaaggccaattggtgaggaacttggggctggtctcgagagagggaatgatagggagtctgaaaatgtgtcaaaagaagatctagctgctgaatctccgtgggatgttaatgaagagaagagtgagaatcacggttcatccactgatcacgagcctctaacggaatctatcttcaacttccatgctgctcaagaagctcttgctagtgaaattcagaaattcaaagaaatagggaaagatactaactttggtcattcacttgaggatgttggtataccttcaaatttcacgtcagatgactcagattttcctagatcaagcacatccgtgctgtcacagaacagagatggtgctcaaagttctcttaactccttggagtctgaagtgtatagcctaaagcagaatatattactgttgcaaaaccaggttcaggaagcagctgacctggctnaatccaggaaagcagagtactgaacttgaagccatttttagtagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99884" stop="95942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99584" g_stop="99508" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98465" g_stop="98174" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="369" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96531" g_stop="96242" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="657" r_length="288" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E213688" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99584" e_stop="99508"/>
          <exon e_start="98465" e_stop="98174"/>
          <exon e_start="96531" e_stop="96242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTGAGTGATGGATTTGGTGTAATAGGTGACTCTGGTTTGGCTATGGGGCCTAATTTTATTGCTGTATCGGAATCAGAGAACAGCGAGGATCGGAGTAGTAGGTCTTCTACTGCAGCTAGTGCTCCAAAGGCAAGGTATGAAGCACCTGTGCACCTTGGTTATCCATCTGACAAGCATTGGTTGAGGAGTTTGAGTGGGAAGAGCTTGAGCACATCAGCTCAGAAACCACATCAGAGAAAAGGTCGGGCTGAAACTTGTAAAAAGCCTAGAGGAGAAAGGGTCAAAATCGAGAAGGAAAACTCTCATTCCAGCATGGAATCTGACTCGCGAAGCTCTAATTTCCTCTTTATGCAGGGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGT</genome_strand>
        <mrna_strand>TCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAAGCAGCTGACCTGGCTNAATCCAGGAAAGC-AGAG-TACTGAACTTGAAGCCATTTTTAGTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431800" ref_strand="+" ref_description="SGN-E431800 [STM-56-E5]">
      <seq>gtaacagttcaggcggctaataatttcccaaattcgttccgaattctagggtttccataatcccaattctattcgaattcatcaaaatctcttggaaatccagcacaataatgaatgaaaagggtgactttgctacaagtaatggtacaaaaggtgaaaggtcaatgatctatgatggagaatccagtgatgaagctcaggacagagaaagaccaattggtgaggaacttcgggctggtctcgagagagggaatgatagggagtctgaaaatgtgtcacaagaagatctagctgctgaatctccgtgggaagttaatgaagagaagagtgagaatcgcggttcatccactgatcacgatcctctaacggaatctatcttcaatttccaggctgctcaagaagctcttgctaatgaaattcagaaattcaaagaaatcgggaaagatactacctttggtcattcgcttgaggatgttggtataccttcaaatttcacttcagatgactcaaatttccctagaccaagcacatccgtgctgtcacagaacagagatggtgctcaacattctcttaactccttggagtctgaagtgtttagcctaaagcagaatatattactgttgcaaaacaaggttcagaaggcagctgacctggttatatccaaggaagcaagaattaccgaactttgagccattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99921" stop="95950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99621" g_stop="99508" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.798"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042">
            <donor d_prob="0.998" d_score="0.60"/>
            <acceptor a_prob="0.943" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98465" g_stop="98174" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="414" r_length="292" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.974" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96531" g_stop="96250" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="696" r_length="282" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E431800" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99621" e_stop="99508"/>
          <exon e_start="98465" e_stop="98174"/>
          <exon e_start="96531" e_stop="96250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACAGTTCAGGCGGCTATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAA-T--T-----TCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTGAGTGATGGATTTGGTGTAATAGGTGACTCTGGTTTGGCTATGGGGCCTAATTTTATTGCTGTATCGGAATCAGAGAACAGCGAGGATCGGAGTAGTAGGTCTTCTACTGCAGCTAGTGCTCCAAAGGCAAGGTATGAAGCACCTGTGCACCTTGGTTATCCATCTGACAAGCATTGGTTGAGGAGTTTGAGTGGGAAGAGCTTGAGCACATCAGCTCAGAAACCACATCAGAGAAAAGGTCGGGCTGAAACTTGTAAAAAGCCTAGAGGAGAAAGGGTCAAAATCGAGAAGGAAAACTCTCATTCCAGCATGGAATCTGACTCGCGAAGCTCTAATTTCCTCTTTATGCAGGGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTT</genome_strand>
        <mrna_strand>GTAACAGTTCAGGCGGCTAATAATTTCCCAAATTCGTTCCGAATTCTAGGGTTTCCATAATCCCAATTCTATTCGAATTCATCAAAATCTCTTGGAAATCCAGCACAATAATGAATGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGATCTATGATGGAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGACCAATTGGTGAGGAACTTCGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCACAAGAAGATCTAGCTGCTGAATCTCCGTGGGAAGTTAATGAAGAGAAGAGTGAGAATCGCGGTTCATCCACTGATCACGATCCTCTAACGGAATCTATCTTCAATTTCCAGGCTGCTCAAGAAGCTCTTGCTAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGAAATTCAAAGAAATCGGGAAAGATACTACCTTTGGTCATTCGCTTGAGGATGTTGGTATACCTTCAAATTTCACTTCAGATGACTCAAATTTCCCTAGACCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAACATTCTCTTAACTCCTTGGAGTCTGAAGTGTTTAGCCTAAAGCAGAATATATTACTGTTGCAAAACAAGGTTCAGAAGGCAGCTGACCTGGTTATATCCAAGGAAGCAAGAATTACCGAACTTTGAGCCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358010" ref_strand="+" ref_description="SGN-E358010 [cLHT-32-P5]">
      <seq>ttaatttcccaaattcgttcccaattctagggtttccataatctcaattctcttcgaatttatcaaaatctcttggaaatcctgcacaataatgaatgaaaagggtgactttgctacaagtaatggtacaaaaggtgaaaggtcaatgaactatgatggagaatccagtgatgaagctcaggacagagaaagaccaattggtgaggaacttcgggctggtctcgagagagggaatgatagggagtctgaaaatgtgtcacaagaagatctagctgctgaatctccgtgggatgttaatgaagagaagagtgagaatcacggttcatccactgatcacgatcctctaacggaatctatcctcaacttccaggctgctcaagaagctcttgctagtgaaattcagaaattcaaagaaatagggaaagatactaactttggtcattcacttgaggatgttggtataccttcaaatttcacgtcagatgacttagattttcctagaccaagcacatccgtgctgtcacagaacagagatggtgctcaacattctcttaacttctctgagtctgaagtgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99902" stop="96049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99602" g_stop="99508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.800"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042">
            <donor d_prob="0.998" d_score="0.57"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98465" g_stop="98174" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="395" r_length="292" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96531" g_stop="96349" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="578" r_length="183" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E358010" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E358010" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99602" e_stop="99508"/>
          <exon e_start="98465" e_stop="98174"/>
          <exon e_start="96531" e_stop="96349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAA--T-T-----TCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTGAGTGATGGATTTGGTGTAATAGGTGACTCTGGTTTGGCTATGGGGCCTAATTTTATTGCTGTATCGGAATCAGAGAACAGCGAGGATCGGAGTAGTAGGTCTTCTACTGCAGCTAGTGCTCCAAAGGCAAGGTATGAAGCACCTGTGCACCTTGGTTATCCATCTGACAAGCATTGGTTGAGGAGTTTGAGTGGGAAGAGCTTGAGCACATCAGCTCAGAAACCACATCAGAGAAAAGGTCGGGCTGAAACTTGTAAAAAGCCTAGAGGAGAAAGGGTCAAAATCGAGAAGGAAAACTCTCATTCCAGCATGGAATCTGACTCGCGAAGCTCTAATTTCCTCTTTATGCAGGGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATA</genome_strand>
        <mrna_strand>TTAATTTCCCAAATTCGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTATCAAAATCTCTTGGAAATCCTGCACAATAATGAATGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGGAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGACCAATTGGTGAGGAACTTCGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCACAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGATCCTCTAACGGAATCTATCCTCAACTTCCAGGCTGCTCAAGAAGCTCTTGCTAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTTAGATTTTCCTAGACCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAACATTCTCTTAACTTCTCTGAGTCTGAAGTGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719453" ref_strand="+" ref_description="SGN-E719453 [FC07DF11]">
      <seq>gggagataatatacaaattggctagaaacaataaagatagttgcaacagttcaggcggctattaatttcccaaatttgttcccaattctagggtttccataatctcaattctcttcgaatttctcttggaaatccagcagaataatgaatgaaaagggtgactttgctacaagtaatggtacaaaaggtgaaaggtcaatgaactatgatgaagaatccagtgatgaagctcaggacagagaaaggccaattggtgaggaacttggggctggtctcgagagagggaatgatagggagtctgaaaatgtgtcaaaagaagatctagctgctgaatctccgtgggatgttaatgaagagaagagtgagaatcacggttcatccactgatcacgagcctctaacggaatctatcttcaacttccatgctgctcaagaagctcttgctagtgaaattcataaattcgaagaaatagggaaagatactaactttggtcattcacttgaggatgttggtagaccttcaaatttctcgtcagatgactcaaattttcctacatcaagcacatccttgctgtcacagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99962" stop="96099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99663" g_stop="99508" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98465" g_stop="98174" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="448" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96531" g_stop="96399" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="581" r_length="133" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E719453" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99663" e_stop="99508"/>
          <exon e_start="98465" e_stop="98174"/>
          <exon e_start="96531" e_stop="96399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAGATAATATACAAATTGGCTAGAAACAATAAAGATAGTTGCAACAGTTCAGGCGGCTATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTGAGTGATGGATTTGGTGTAATAGGTGACTCTGGTTTGGCTATGGGGCCTAATTTTATTGCTGTATCGGAATCAGAGAACAGCGAGGATCGGAGTAGTAGGTCTTCTACTGCAGCTAGTGCTCCAAAGGCAAGGTATGAAGCACCTGTGCACCTTGGTTATCCATCTGACAAGCATTGGTTGAGGAGTTTGAGTGGGAAGAGCTTGAGCACATCAGCTCAGAAACCACATCAGAGAAAAGGTCGGGCTGAAACTTGTAAAAAGCCTAGAGGAGAAAGGGTCAAAATCGAGAAGGAAAACTCTCATTCCAGCATGGAATCTGACTCGCGAAGCTCTAATTTCCTCTTTATGCAGGGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTGGTACATCCTTCTGCTTAAATGATAATATCAATTAATCATGATTTGCCTCATAAATTTGTTCTTGCACATTCTGTATGTTGCACTAGGTGGCGTCTTTCTAGATGGATCAATATGCTTAGAGGATGGTACTTATGTTTGACACTTCCTATTTGGGCGTCATTCAAGAAATATATGCTAGCATCATCTAGGAACAATAATATCAAGTTTATTAGTCAGTGAATCTTTTTTTAGGAGGTAGCATTTATAATCCTTATATTGTGCATATCCCTAAAGAATCATTTGGAGATGGGCTATGCGTTCTCCTCTTCCAGGAGGTATTTAACTGTTTATATTTGGTTATCATGCTGTAACGTGTGTGCATATCAGACCATGGTGTTCTTTTCTTTTCTAAAAGCAGCTTTTATGTGCCTAATGTCATGTATTTTACAATTACTATTTCTTTTAATTTTTATCGGTATAATAACTTGGATTATACTATGAACGTGTTTCTGTTAGCAATAGCGGATTTCTTGAGAATGTATTTACAAATACAGAGACCACTTTCAACTTAAATCATGTCTAGCAAACCTTTGATAAAGTGGATCTCATGCTAACTGGAAACAGTCTACATAAGCTTATTAACTTTCTATTTCTGTTTGGACTTGAAACCACTTCCTTCTCTGACTCACCGTTCACACAAGTGCACTTAACTTTCTTTTATCTGCATCCAGACCCTTTCATTCAAATCTGTTATACCTGCTATAGGATGTTCTTGAGGTGTTAGAGATTGTAATTTGAAGAATTTAATTTCTGACTGAGAGAAAATAAAATCAGGATATCAATTCCACCTCCTTTTGTTATGGAAGAATTATGCTTATTGCTGAATTTGTTATTCAGAGCTGACCTTACAGTGTAGTAAGTTAGCCTCACTGGTAAGAGAGCCATTGTCATCACATTTGGGACACATGGGTGAGGAAGGCCTGACCATTTCTCAGCAAAAGAGGCCCTCTCTACGAACAAGGTACTGTTAAGATGGATAGGCTTCTAGCTCCCAGGGTTGGTGCCTTGTGTGCCTTGAACTATTTTTTAGAGGCTTCTTTGGGATTTCAGCCTGCTCCCACTCTATCCGAACGCCTCCTGTCCCACAAGGCTGTAGATAAAACAAATTACAGAGAAGCAAAAGTCATTTTATGTGAAGTTGAGAGTCTTGGTTAAAATAGAACTTTGTTTCTTGCTTTTGAAGCATTAGATGGACAGGTTTAGGTGCTTGCCCTCCTAGTTTAGTAGTGTAATCCGTATCATTGTCATATAAGGATAGTTGGTTATAGTTGTTGGTTTTGTTTGACGCCAGAAACAGATTACAAGGGAAGTACATATTATATCATTTTGAAGTAGTGGACCAGTTCCCTTTCTGTGAACGGTCTTTTTTTGGATGAGCTTTACTATGTCGTATGTTTGTACTATGCTTAAAGAACTTCTACTGATCTGTTCACTGAATAAGTATATCCATTGATTTTTGGTTGTTCACAGTCCATATTCCTTTAGCTTACCTTGTCGTTCTTTCTAATTTAATCTGATAAACCATGAAATATTCTTAAAAAATCATTGAATTTCTTATTATCCGTGCATTGGGACTAATTTTATTGATTTACTTTCTACACAGAAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAA</genome_strand>
        <mrna_strand>GGGAGATAATATACAAATTGGCTAGAAACAATAAAGATAGTTGCAACAGTTCAGGCGGCTATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCATAAATTCGAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTAGACCTTCAAATTTCTCGTCAGATGACTCAAATTTTCCTACATCAAGCACATCCTTGCTGTCACAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E537672" ref_strand="+" ref_description="SGN-E537672 [TUS-56-G8]">
      <seq>tattaatttcccaaatttgttcccaattctagggtttccataatctcaattctcttcgaatttctcttggaaatccagcagaataatgaatgaaaaggtacgcccagttacttaattgcttctccatttcctaattttttgcatctgcagtacaagtttttacaatgaacgaattcaattttgttcaatatgatgatttttcaagctgcaaattgtcgaagcaatcataattgattttgtcgagaaattttgtttcaattgttatccgtcagctggaatgatggttggtagttctcgatcttgatctgggttcgtaaaaaaggtttaattttaatatatatttgtctctagttatggacttggaagaacaaaatacagctaataataaggaaatgatcacaccaccaatatttgaaaatgctaatcaaagcaaggtagaaagtagtgatgggtctagtcctcctggggataatagcagtaataataatttggatgatgtgaaaggcaagggaattgacattaaagaggttgaggattattcaactcccctggtgaaatcctctccaataactaaggggtttgggttgaaaaaatggaaaaggatgaagcgggatgcgcagcgccaggatggggatagtagtgttaacagcggtaagctgttgaaacggggtttggcgagtgagtttgctaatgcagaaaaactgcaacttttgctgtgggaaggatcaaaaaagtgatggatctgtttctcaacgaatgcagtattcatgaatcctggagttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99904" stop="98517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99604" g_stop="98817" g_length="788"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="785" r_length="785" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E537672" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E537672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99604" e_stop="98817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTG</genome_strand>
        <mrna_strand>TATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAA-CTGCAACTTTTGCTGTGGGAAGGAT-CAAAAAAGTGATGGATCTGTTTC-TCAACGAATGCAGTATTCATGAATCCTGGAGTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266145" ref_strand="+" ref_description="SGN-E266145 [cLEI-6-F10]">
      <seq>tcccaaatttgtatcccaagggtaggtgtttccatagatctcaattctcattcgaatttctcttggaaataccagctagaataatgtaatgaataaggtaccgcccagttaccattaattgcttctccatttacctaattgttttgcattctgcagtacaacgtttttacaatgaaccgaattcaattttgttcaatatgatgatttttcaagctgcaaattgtcgaagcaatcataattgattttgtcgagaaattttgtttcaattgttatccgtcagctggaatgatggttggtagttctcgatcttgatctgggttcgtaaaaaaggtttaattttaatatatatttgtctctagttatggacttggaagaacaaaatacagctaataataaggaaatgatcacaccaccaatatttgaaaatgctaatcaaagcaaggtagaaagtagtgatgggtctagtcctcctggggataatagcagcaataataatttggatgatgtgaaaggcaagggaattgacattaaagaggttgaggattattcaactcccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="99875" stop="98755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99596" g_stop="99055" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E266145" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266145" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99596" e_stop="99055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAATTTGT-TCCCAATTCTAGG-GTTTCCATA-ATCTCAATTCTC-TTCGAATTTCTCTTGGAAAT-CCAGC-AGAATAATG-AATGAA-AAGGTA-CGCCCAGTTA-C-TTAATTGCTTCTCCATTT-CCTAATT-TTTTGCA-TCTGCAGTACAA-GTTTTTACAATGAA-CGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCT</genome_strand>
        <mrna_strand>TCCCAAATTTGTATCCCAAGGGTAGGTGTTTCCATAGATCTCAATTCTCATTCGAATTTCTCTTGGAAATACCAGCTAGAATAATGTAATGAATAAGGTACCGCCCAGTTACCATTAATTGCTTCTCCATTTACCTAATTGTTTTGCATTCTGCAGTACAACGTTTTTACAATGAACCGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGCAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="100793" stop="101686"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101093" g_stop="101381" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>289</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101093" e_stop="101381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGTAAGAAGATATATG-TTTT-TCTCACTTTATAC--AAAGAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTTTATAATTCATTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATACATTTTTTCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAAA</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200845" ref_strand="+" ref_description="SGN-E200845 [cLEC-5-G3]">
      <seq>aaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaatttatacacttctgtgtatatagcgagataggcgagcgagaatggagagtggcgagcgagatttttgggagggagacgcctgacaaactttagctaacgtttgctatggagcacaattaaatcaaactctagctactccatttagttagattactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="100794" stop="101838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101094" g_stop="101538" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E200845" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101094" e_stop="101538"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATAGTAAGAAGATATATG-TTTT-TCTCACTTTATAC--AAAGAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTTTATAATTCATTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATACATTTTTTCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACA-AAATTATACACTTCTGTGTATAAAGCGAGAGAGGCAAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACG-CTGGCAAATTTTAGCTAATGTTTGCTATGGAGCACAATTAAATCAAACCCTAGCTATTCCATTTAATTTAAGTTATTAG</genome_strand>
        <mrna_strand>AAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAATTTATACACTTCTGTGTATATAGCGAGATAGGCGAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGGGAGACGCCTGACAAACTTTAGCTAACGTTTGCTATGGAGCACAATTAAATCAAACTCTAGCTACTCCATTT-AGTTAGATTACTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405162" ref_strand="+" ref_description="SGN-E405162 [PPC-16-F10]">
      <seq>agctgcctcacaagccaagcatggaagagcgaagaggaatcagcactgctactagttaaacttggtttggcacgaaaagcaaacaggcaaacaggatgctggatccaattccatcccatcacgcagatttttgcgaaaaggaaagatggactagttgctgctaaagccaatgttcaaggtgcaaggaaacttggaaacccggtaacagattctgaccatctttgggcatgtgctttccttgtgtttggtttcaagtccgaaccaccagttgttcagctcaaggcgatggacatggttttcttcatcagaaaaacagctcttcctttagcaatcagtgccttcacaacattctcaagatgcaactcggccttagaactcttgaaggtctgcacaaatgtgctcgaagaagcagagaagtcatttgtttctcaaatacaggattggtgccacggatctctctgctggaaaaagaagcttcaatctaaccaaagagtggacgagtatgtttggcaagaggtgacattattgaaagctaccctactggaaactagagcaaagctgctactaagaggaggtcatttcgataacggagaggatctttgcagaacctgcattagtatccgaaccgtaatgttgggtcataaccatgctcaaactttggctgctcaacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="106120" stop="107391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106420" g_stop="107091" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E405162" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106420" e_stop="107091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AG-TGCCTGACAAGCCAAGCATGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTAAAACTTGGTTTGGCACGAAAAGCCAACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACACAGATTTTTGCGAAAAGGAAAGATGGACTAGTTGCTGCTAAAGCCAATATTCAAGGTGCAAGGAAACTTGGAAACCCGGTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCTGAACCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTTCCTTTGGCAATCAGCGCTTTCACAACATTCTCACGATGCAACTCGGCCTTAGAACTCTTGAAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGATTGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTGCAATCTAACCAAAGAGTGGACGAGTACGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTGCTACTAAGAGGAGGTCATTTTGATAGCGGAGAGGATCTTTGCAGAACCTGCATTAGTATCCGAACTGTAATGCTGGGACATAACCATGCTCAAACTTTGGCTGCTCAACAAA</genome_strand>
        <mrna_strand>AGCTGCCTCACAAGCCAAGCATGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTTAAACTTGGTTTGGCACGAAAAGCAAACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACGCAGATTTTTGCGAAAAGGAAAGATGGACTAGTTGCTGCTAAAGCCAATGTTCAAGGTGCAAGGAAACTTGGAAACCCGGTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCCGAACCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTTCCTTTAGCAATCAGTGCCTTCACAACATTCTCAAGATGCAACTCGGCCTTAGAACTCTTGAAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGATTGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTTCAATCTAACCAAAGAGTGGACGAGTATGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTGCTACTAAGAGGAGGTCATTTCGATAACGGAGAGGATCTTTGCAGAACCTGCATTAGTATCCGAACCGTAATGTTGGGTCATAACCATGCTCAAACTTTGGCTGCTCAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434216" ref_strand="+" ref_description="SGN-E434216 [STM-59-J13]">
      <seq>ctgcctcacaagccaagcatggaagagcgaagaggaatcagcactgctactagttaaacttggtttggcacgaaaagcaaacaggcaaacaggatgctggatccaattccatcccatcacgcagatttttgcgaaaaggaaagatggactagttgctgctaaagccaatgttcaaggtgcaaggaaacttggaaacccggtaacagattctgaccatctttgggcatgtgctttccttgtgtttggtttcaagtccgaaccaccagttgttcagctcaaggcgatggacatggttttcttcatcagaaaaacagctcttcctttagcaatcagtgccttcacaacattctcaagatgcaactcggccttagaactcttgaaggtctgcacaaatgtgctcgaagaagcagagaagtcatttgtttctcaaatacaggattggtgccacggatctctctgctggaaaaagaagcttcaatctaaccaaagagtggacgagtatgtttggcaagaggtgacattattgaaagctaccctactggaaactagagcaaagctgctactaagaggaggtcatttcgataacggagaggatctttgcagaacctgcattagtatccgaaccgtaatgttgggtcataaccatgctcaaactttggctgctcaacaaacattagccaaattagtaaggatgaggagcaaaatatgagcccaaaactcctcnaaaaacacctttttttggtggctcagttttgtttactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="106122" stop="107472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106421" g_stop="107138" g_length="718"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="718" r_length="718" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E434216" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106421" e_stop="107138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCCTGACAAGCCAAGCATGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTAAAACTTGGTTTGGCACGAAAAGCCAACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACACAGATTTTTGCGAAAAGGAAAGATGGACTAGTTGCTGCTAAAGCCAATATTCAAGGTGCAAGGAAACTTGGAAACCCGGTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCTGAACCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTTCCTTTGGCAATCAGCGCTTTCACAACATTCTCACGATGCAACTCGGCCTTAGAACTCTTGAAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGATTGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTGCAATCTAACCAAAGAGTGGACGAGTACGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTGCTACTAAGAGGAGGTCATTTTGATAGCGGAGAGGATCTTTGCAGAACCTGCATTAGTATCCGAACTGTAATGCTGGGACATAACCATGCTCAAACTTTGGCTGCTCAACAAACCTTAGCCAACTTAGTAAGGATGAGGAGCAAAATATGATCCCAAAAA</genome_strand>
        <mrna_strand>CTGCCTCACAAGCCAAGCATGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTTAAACTTGGTTTGGCACGAAAAGCAAACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACGCAGATTTTTGCGAAAAGGAAAGATGGACTAGTTGCTGCTAAAGCCAATGTTCAAGGTGCAAGGAAACTTGGAAACCCGGTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCCGAACCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTTCCTTTAGCAATCAGTGCCTTCACAACATTCTCAAGATGCAACTCGGCCTTAGAACTCTTGAAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGATTGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTTCAATCTAACCAAAGAGTGGACGAGTATGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTGCTACTAAGAGGAGGTCATTTCGATAACGGAGAGGATCTTTGCAGAACCTGCATTAGTATCCGAACCGTAATGTTGGGTCATAACCATGCTCAAACTTTGGCTGCTCAACAAACATTAGCCAAATTAGTAAGGATGAGGAGCAAAATATGAGCCCAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434217" ref_strand="+" ref_description="SGN-E434217 [STM-59-J13]">
      <seq>acatctaaaaaatgttttttttgctgaaattttctgcatttcgtataagttgaactgatgtggtaaaaagtacttgataatggatgatttctatcttacatgaactaaagagtgaattgcttggtgacagtaaacaaaactgagccaccaaaaaaggtggttttttgaggagttttgggctcatattttgctcctcatccttactaatttggctaatgtttgttgagcagccaaagtttgagcatggttatgacccaacattacggttcggatactaatgcaggttctgcaaagatcctctccgttatcgaaatgacctcctcttagtagcagctttgctctagtttccagtagggtagctttcaataatgtcacctcttgccaaacatactcgtccactctttggttagattgaagcttctttttccagcagagagatccgtggcaccaatcctgtatttgagaaacaaatgacttctctgcttcttcgagcacatttgtgcagaccttcaagagttctaaggccgagttgcatcttgagaatgttgtgaaggcactgattgctaaaggaagagctgtttttctgatgaagaaaaccatgtccatcgccttgagctgaacaactggtggttcggacttgaaaccaaacacaaggaaagcacatgcccaaagatggtcagaatctgttaccgggtttccaagtttccttgcaccttgaaacatggctttagcagcaactagtccatctttccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="107566" stop="106255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107299" g_stop="106555" g_length="745"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="755" r_length="755" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E434217" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107299" e_stop="106555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTAACAAAATGAATAAATTGCTGAAATCGATATGCATTTCGTATAAGTTGAACTGATGTGGTAAAAAGTACTTGATAATGGATGATTTCTATGTTACATGAACTAAAGAGGGAATAGCTTGGTGACAGTAAACAAAACTGAGCCACC-AAAAAGGTGGCTTTTTG-GGA---------TCATATTTTGCTCCTCATCCTTACTAAGTTGGCTAAGGTTTGTTGAGCAGCCAAAGTTTGAGCATGGTTATGTCCCAGCATTACAGTTCGGATACTAATGCAGGTTCTGCAAAGATCCTCTCCGCTATCAAAATGACCTCCTCTTAGTAGCAGCTTTGCTCTAGTTTCCAGTAGGGTAGCTTTCAATAATGTCACCTCTTGCCAAACGTACTCGTCCACTCTTTGGTTAGATTGCAGCTTCTTTTTCCAGCAGAGAGATCCGTGGCACCAATCCTGTATTTGAGAAACAAATGACTTCTCTGCTTCTTCGAGCACATTTGTGCAGACCTTCAAGAGTTCTAAGGCCGAGTTGCATCGTGAGAATGTTGTGAAAGCGCTGATTGCCAAAGGAAGAGCTGTTTTTCTGATGAAGAAAACCATGTCCATCGCCTTGAGCTGAACAACTGGTGGTTCAGACTTGAAACCAAACACAAGGAAAGCACATGCCCAAAGATGGTCAGAATCTGTTACCGGGTTTCCAAGTTTCCTTGCACCTTGAATATTGGCTTTAGCAGCAACTAGTCCATCTTTCCTTT</genome_strand>
        <mrna_strand>ACATCTAAAAAATGTTTTTTTTGCTGAAAT-TTTCTGCATTTCGTATAAGTTGAACTGATGTGGTAAAAAGTACTTGATAATGGATGATTTCTATCTTACATGAACTAAAGAGTGAATTGCTTGGTGACAGTAAACAAAACTGAGCCACCAAAAAAGGTGGTTTTTTGAGGAGTTTTGGGCTCATATTTTGCTCCTCATCCTTACTAATTTGGCTAATGTTTGTTGAGCAGCCAAAGTTTGAGCATGGTTATGACCCAACATTACGGTTCGGATACTAATGCAGGTTCTGCAAAGATCCTCTCCGTTATCGAAATGACCTCCTCTTAGTAGCAGCTTTGCTCTAGTTTCCAGTAGGGTAGCTTTCAATAATGTCACCTCTTGCCAAACATACTCGTCCACTCTTTGGTTAGATTGAAGCTTCTTTTTCCAGCAGAGAGATCCGTGGCACCAATCCTGTATTTGAGAAACAAATGACTTCTCTGCTTCTTCGAGCACATTTGTGCAGACCTTCAAGAGTTCTAAGGCCGAGTTGCATCTTGAGAATGTTGTGAAGGCACTGATTGCTAAAGGAAGAGCTGTTTTTCTGATGAAGAAAACCATGTCCATCGCCTTGAGCTGAACAACTGGTGGTTCGGACTTGAAACCAAACACAAGGAAAGCACATGCCCAAAGATGGTCAGAATCTGTTACCGGGTTTCCAAGTTTCCTTGCACCTTGAAACATGGCTTTAGCAGCAACTAGTCCATCTTTCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416115" ref_strand="+" ref_description="SGN-E416115 [STM-22-D17]">
      <seq>ccctttttttttcagaacacaggtttttttgtaaacttttagaaccagcaacatctcttccttacatacaaaaaccaaaacactcagtaaattcactctcacaatcaacaacaactacatacccagtatagtcccacaagtgagcatgtaaggatacaatgtacgcagaacttatctggattaaaaaaatcaacagccaaccaaaaaaatcaaatcttttagcatcttctttctttaattcagtaattcacacaactctcaatcaacaaaaacacaaaaaaaactaaagaagaatcagataatgttggtgagtcagtgtaatgatcaagatgatcctctttcagcatttgaaatcaatccagtagaaacggcatcgtcttcatcaacaaacaatccttctggattcctcaaacctccatgaatcactgataacaaaacacccatcattataccaatcatcaaactgcttaaaattccggtataccaaacaacaattgcagaaacagtcgctagaccggaaatcacagctagatcgctaacttgatgccctagaacaaccataggatcctcccggaagaagagaaaaatcaaccacgacgcaaaaatcaaacaggcgaaaatcaataaaattggtgttccgatgagtgaacaagctgcgcaagcagagatgagaatggcatagttaacggagaagtacttgaagttcctacggacgcgaattgcagcatcggagaaggatgtcggaatgtcaacggcgcttgctccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="107306" stop="108637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107613" g_stop="108337" g_length="725"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="766" r_length="712" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E416115" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107613" e_stop="108337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCCTTACATACAAAAACCAAAACACTCGGTAAATTCACTCTCACAATCAACAAACAACTACATACCCAATATAGTCCCACGAGTGAACATGTGAGGATACAATGTACGAGAGAACTTATCT-GATAAATAAAAATCAACATCCAACCAAAAAATTTATCAAATCCTTTTAACATCTTCTTGCTTTAATTCAGTAATTCACACAACTCTCAATCAACAAAAACACAAAAAAAAAAAAAAAAAAAAAAAACTAAAGAAGAATCAAATAATGTTGGTGAGTCAGTGTAATGATCCTCTTTCAGCATTTGAAATCAATCCAGAAGAAACGGCGTCGTCTTCATCAACAAACAACCCTTCTGGATTCCTCAAACTTCCATGAATCACTGATAACAAAACTCCCATCATTATACCAATCATCAAACTGTTCAAAATTCCGGTATACCAAACAACAATGGCAGAAACAGTCGCCAGACCGGAAATCACAGCTAGATCGCTAACTTGATGCCCTAGAACAACCATAGGATCCTCCCGGAAGAAGAGAAAAATCAACCACGACGCAAAAATCAAACAGAAGAAAATCAATAAAATTGGTGTTCCGATGAGTGAACAAGCTGCGCAAGCAGAGATGAGAATAGCATAATTAACGGAGAAGTACTTCAAGTTCCTGCGGACGCGAATTGCAGCATCGGAGAAGGATGTCGGAATGTCAACGGCGCTTGCGCCG</genome_strand>
        <mrna_strand>CTCTTCCTTACATACAAAAACCAAAACACTCAGTAAATTCACTCTCACAATCAAC-AACAACTACATACCCAGTATAGTCCCACAAGTGAGCATGTAAGGATACAATGTACG-CAGAACTTATCTGGATTAA-AAAAATCAACAGCCAACCAAAAAA---ATCAAAT-CTTTTAGCATCTTCTTTCTTTAATTCAGTAATTCACACAACTCTCAATCAACAAAAACACAAAAAAAACTAAAGAAGAATCAGA-TAATGTTG-GTGAGTCAGTG-TAATGA-TCA-AG--ATGATCCTCTTTCAGCATTTGAAATCAATCCAGTAGAAACGGCATCGTCTTCATCAACAAACAATCCTTCTGGATTCCTCAAACCTCCATGAATCACTGATAACAAAACACCCATCATTATACCAATCATCAAACTGCTTAAAATTCCGGTATACCAAACAACAATTGCAGAAACAGTCGCTAGACCGGAAATCACAGCTAGATCGCTAACTTGATGCCCTAGAACAACCATAGGATCCTCCCGGAAGAAGAGAAAAATCAACCACGACGCAAAAATCAAACAGGCGAAAATCAATAAAATTGGTGTTCCGATGAGTGAACAAGCTGCGCAAGCAGAGATGAGAATGGCATAGTTAACGGAGAAGTACTTGAAGTTCCTACGGACGCGAATTGCAGCATCGGAGAAGGATGTCGGAATGTCAACGGCGCTTGCTCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E438301" ref_strand="+" ref_description="SGN-E438301 [cSTA-7-I18]">
      <seq>caaatatgccatcaccacccacctccgttaccaccgtcacctacaccaccatcccgatcgccgtcggtgatgtcatcaaccggtccgttcagaatctctacaccttccttttccgaagtcgaccatggccggaattgatcgccggagcaagcgccgttgacattccgacatccttctccgatgctgcaattcgcgtccgtaggaacttcaagtacttctccgttaactatgccattctcatctctgcttgcgcagcttgttcactcatcggaacaccaattttattgattttcgcctgtttgatttttgcgtcgcggatgatttttctcttcttccgggaggatcctatggttgttctagggcatcaagttagcgatctagctgtgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="108779" stop="107790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108479" g_stop="108090" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="390" r_length="390" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E438301" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108479" e_stop="108090"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATATGCCATCACCGCCGACCTCCGTCACCACGGCCACCTACACCACCATCCCGATCGCCGGCGGTGATGTCATCAACCGGTCCGTTCAAAATATATACACTTTCCTTTCCCGAAGTCGACCATGGCCGGAATTTATCGCCGGCGCAAGCGCCGTTGACATTCCGACATCCTTCTCCGATGCTGCAATTCGCGTCCGCAGGAACTTGAAGTACTTCTCCGTTAATTATGCTATTCTCATCTCTGCTTGCGCAGCTTGTTCACTCATCGGAACACCAATTTTATTGATTTTCTTCTGTTTGATTTTTGCGTCGTGGTTGATTTTTCTCTTCTTCCGGGAGGATCCTATGGTTGTTCTAGGGCATCAAGTTAGCGATCTAGCTGTGATTT</genome_strand>
        <mrna_strand>CAAATATGCCATCACCACCCACCTCCGTTACCACCGTCACCTACACCACCATCCCGATCGCCGTCGGTGATGTCATCAACCGGTCCGTTCAGAATCTCTACACCTTCCTTTTCCGAAGTCGACCATGGCCGGAATTGATCGCCGGAGCAAGCGCCGTTGACATTCCGACATCCTTCTCCGATGCTGCAATTCGCGTCCGTAGGAACTTCAAGTACTTCTCCGTTAACTATGCCATTCTCATCTCTGCTTGCGCAGCTTGTTCACTCATCGGAACACCAATTTTATTGATTTTCGCCTGTTTGATTTTTGCGTCGCGGATGATTTTTCTCTTCTTCCGGGAGGATCCTATGGTTGTTCTAGGGCATCAAGTTAGCGATCTAGCTGTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345276" ref_strand="+" ref_description="SGN-E345276 [cTOF-13-N15]">
      <seq>acaagtacagccatcccctacatctccagcctcgtttttgtgtaagagcagtggcagtggattgatgggtgccccctttggcagacaagactatttaggtaggggcaacttacatactgtgcgaaatggaccaaacgagacatgtgatatgaagaagtttgtagcaactcccatctctcattggcagaatgcaacttcagttgggccaaatgctgtcagagaaattattgtaattgatgattctccagaaaacgaggctaattctccatacaccatgaactcagggaaaatgcagattagctcaggctatacctcaaggtttgtggatctctgtgaaaatagaccgcgtggtgaaactggagcagctcagaatgcaaatttgcttactcaagtgaatgagcttcctgctaagacatggaatgtcaacccagacggttgtagtttagttcatccgagctctttctcagcttcctcatcacctgcaggtccttttagatcatctttatattattctccaggtttttcataaccaagaaatcgtcttttacatcttgactgacaaaagaaaacgcggcaaagttgagcagatgagtttttctagtttgggttttcgctttcatagcgtttgatgtttactcaaaacagtactgaaagttccatagatatatataatatatataaagcagtttaattactgaagccagttgaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="114739" stop="113428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114439" g_stop="113728" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E345276" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345276" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114439" e_stop="113728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGTACAGCCATCCCCTACATCTCCAGCCTCGTTTTTGTGTAAGAGCAGTGGCAGTGGATTGATGGGTGCCCCCTTTGGCAGACAAGACTATTTAGGTAGGGGCAACTTACATACTGTGCGAAATGGACCAAACGAGACATGTGATATGAAGAAGTTTGTAGCAACTCCCATCTCTCATTGGCAGAATGCAACTTCAGTTGGGCCAAATGCTGTCAGAGAAATTATTGTAATTGATGATTCTCCAGAAAACGAGGCTAATTCTCCATACACCATGAACTCAGGGAAAATGCAGATTAGCTCAGGCTATACCTCAAGGTTTGTGGATCTCTGTGAAAATAGACCGCGTGGTGAAACTGGAGCAGCTCAGAATGCAAATTTGCTTACTCAAGTGAATGAGCTTCCTGCTAAGACATGGAATGTCAACCCAGACGGTTGTAGTTTAGTTCATCCGAGCTCTTTCTCAGCTTCCTCATCACCTGCAGGTCCTTTTAGATCATCTTTATATTATTCTCCAGGTTTTTCATAACCAAGAAATCGTCTTTTACATCTTGACTGACAAAAGAAAACGCGGCAAAGTTGAGCAGATGAGTTTTTCTAGTTTGGGTTTTCGCTTTCATAGCGTTTGATGTTTACTCAAAACAGTACTGAAAGTTCCATAGATATATATAATATATATAAAGCAGTTTAATTACTGAAGCCAGTTGAAAGT</genome_strand>
        <mrna_strand>ACAAGTACAGCCATCCCCTACATCTCCAGCCTCGTTTTTGTGTAAGAGCAGTGGCAGTGGATTGATGGGTGCCCCCTTTGGCAGACAAGACTATTTAGGTAGGGGCAACTTACATACTGTGCGAAATGGACCAAACGAGACATGTGATATGAAGAAGTTTGTAGCAACTCCCATCTCTCATTGGCAGAATGCAACTTCAGTTGGGCCAAATGCTGTCAGAGAAATTATTGTAATTGATGATTCTCCAGAAAACGAGGCTAATTCTCCATACACCATGAACTCAGGGAAAATGCAGATTAGCTCAGGCTATACCTCAAGGTTTGTGGATCTCTGTGAAAATAGACCGCGTGGTGAAACTGGAGCAGCTCAGAATGCAAATTTGCTTACTCAAGTGAATGAGCTTCCTGCTAAGACATGGAATGTCAACCCAGACGGTTGTAGTTTAGTTCATCCGAGCTCTTTCTCAGCTTCCTCATCACCTGCAGGTCCTTTTAGATCATCTTTATATTATTCTCCAGGTTTTTCATAACCAAGAAATCGTCTTTTACATCTTGACTGACAAAAGAAAACGCGGCAAAGTTGAGCAGATGAGTTTTTCTAGTTTGGGTTTTCGCTTTCATAGCGTTTGATGTTTACTCAAAACAGTACTGAAAGTTCCATAGATATATATAATATATATAAAGCAGTTTAATTACTGAAGCCAGTTGAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349270" ref_strand="+" ref_description="SGN-E349270 [cTOS-2-D10]">
      <seq>actgtgcgaaatggaccaaacgagacatgtgatatgaagaagtttgtagcaactcccatctctcattggcagaatgcaacttcagttgggccaaatgctgtcagagaaattattgtaattgatgattctccagaaaacgaggctaattctccatacaccatgaactcagggaaaatgcagattagctcaggctatacctcaaggtttgtggatctctgtgaaaatagaccgcgtggtgaaactggagcagctcagaatgcaaatttgcttactcaagtgaatgagcttcctgctaagacatggaatgtcaacccagacggttgtagtttagttcatccgagctctttctcagcttcctcatcacctgcaggtccttttagatcatctttatattattctccaggtttttcataaccaagaaatcgtcttttacatcttgactgacaaaagaaaacgcggcaaagttgagcagatgagtttttctagtttgggttttcgctttcatagcgtttgatgtttactcaaaacagtactgaaagttccatagatatatataatatatataaagcagtttaattactgaagccagttgaaagttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="114624" stop="113427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114324" g_stop="113730" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="599" polyA_stop="614"/>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E349270" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114324" e_stop="113730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGTGCGAAATGGACCAAACGAGACATGTGATATGAAGAAGTTTGTAGCAACTCCCATCTCTCATTGGCAGAATGCAACTTCAGTTGGGCCAAATGCTGTCAGAGAAATTATTGTAATTGATGATTCTCCAGAAAACGAGGCTAATTCTCCATACACCATGAACTCAGGGAAAATGCAGATTAGCTCAGGCTATACCTCAAGGTTTGTGGATCTCTGTGAAAATAGACCGCGTGGTGAAACTGGAGCAGCTCAGAATGCAAATTTGCTTACTCAAGTGAATGAGCTTCCTGCTAAGACATGGAATGTCAACCCAGACGGTTGTAGTTTAGTTCATCCGAGCTCTTTCTCAGCTTCCTCATCACCTGCAGGTCCTTTTAGATCATCTTTATATTATTCTCCAGGTTTTTCATAACCAAGAAATCGTCTTTTACATCTTGACTGACAAAAGAAAACGCGGCAAAGTTGAGCAGATGAGTTTTTCTAGTTTGGGTTTTCGCTTTCATAGCGTTTGATGTTTACTCAAAACAGTACTGAAAGTTCCATAGATATATATAATATATATAAAGCAGTTTAATTACTGAAGCCAGTTGAAA</genome_strand>
        <mrna_strand>ACTGTGCGAAATGGACCAAACGAGACATGTGATATGAAGAAGTTTGTAGCAACTCCCATCTCTCATTGGCAGAATGCAACTTCAGTTGGGCCAAATGCTGTCAGAGAAATTATTGTAATTGATGATTCTCCAGAAAACGAGGCTAATTCTCCATACACCATGAACTCAGGGAAAATGCAGATTAGCTCAGGCTATACCTCAAGGTTTGTGGATCTCTGTGAAAATAGACCGCGTGGTGAAACTGGAGCAGCTCAGAATGCAAATTTGCTTACTCAAGTGAATGAGCTTCCTGCTAAGACATGGAATGTCAACCCAGACGGTTGTAGTTTAGTTCATCCGAGCTCTTTCTCAGCTTCCTCATCACCTGCAGGTCCTTTTAGATCATCTTTATATTATTCTCCAGGTTTTTCATAACCAAGAAATCGTCTTTTACATCTTGACTGACAAAAGAAAACGCGGCAAAGTTGAGCAGATGAGTTTTTCTAGTTTGGGTTTTCGCTTTCATAGCGTTTGATGTTTACTCAAAACAGTACTGAAAGTTCCATAGATATATATAATATATATAAAGCAGTTTAATTACTGAAGCCAGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735978" ref_strand="+" ref_description="SGN-E735978 [LC03DF07]">
      <seq>cgatagagagaaacatcacaaccttctgaagtctgcttctcatactataaagttttgcttgtccaagccagatcgctgtcccaagattaggagtggtcaagagagcaccttttgtccaagagaaaatgttgaccaaatggattgcctaaataaggacctcagatctgcggaccaaatgctatcaaatggattggccaccataaaacaatgggcatgttcaaagagaactggcctcacaaggaagatcactgataaggacgatcatcacctttctggcgctgatatgtcgactggcgtgcagagtgacaatgatgtgttgcctcacacttatccatttaaaaagagaagcgggcttgtgaaatctccaagatcatctgtttgtttgcctgagagtagcccaagaatggggaatatgctacttgatcatcctcaagaagaacgtagcgaggaaccaccttctctacacgagaaagtggtggacttttcatcatctcaatcttctctcccatctagcaagaagagatccctactgttactcaggcgcaaaggaaaacatttgaaggtagatggccattctgtgatcaatcatccgagtatgactacaggccgtgcactttctgtgaaaaatgtgagagttggaataaacacatataactactctgaggtctactgtgaacagtccactgctcatccatcattctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="117580" stop="115892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117282" g_stop="117198" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117197" i_stop="116809" i_length="389">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116808" g_stop="116192" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="702" r_length="617" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E735978" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117282" e_stop="117198"/>
          <exon e_start="116808" e_stop="116192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGAAAGAAACATCACAACCTTCTGAAATCTGCTTCTCATACTAAAAAGTTTTGCTTGTCCAAGCCAGATCACTGTCCCAAGGTATGTTTTTAAAATCCTGGACATAAAGAAGTTCCCTCAGGTTTTGTTTTGTTCTTGAAACCCATCTTTTATCTAGTACATCTCATCTTCGAAAATTTCATTGCTTCCGAAACTGTAGCACTATAGTGCAGTAATGCTACTGCAAAATTTTAGGAGCGGAAAACAAAAGAATATTGGGAGAGCAATGTTAAACATCTCTTTCTGCACTTTGCCCTTCATGTTCGCTTAATTTCATGATTGTTTTGGTAAATTTGGTGGAAAGGAGGGGCGGGTGCAGGTGGGGTTTCATTTATCTTTTATCAAAAATATTTTGTTTGTACCAATTAGCAATCCTAGTATGTAATATATTAATTTGCTTTGAACTAAGTTGCTAAATATTTTATGAACAGATTAAGAGTGGTCAAGAGAGCACCTTTTGTCCAAGAGAAAATGTTGACAAAATGGATTGCCTAAATAAGGACCTCAGATCTGCGGACCAGATGCTATCAAATGGATTGGCAACCATAAAACAATGGGCATGTTCAAAGAGAACTGGCCTCACAAGGAAGATCAGTGATAAGGACAATCATCAGCTTTCTGGCGCTGATATGTCGACTGGCGTGCAAAGTGACAATGATGTGTTGCCTCAGACTTATCCATTTAAAAAGAGAAGCGGTCTTGTGAAATCTCCAAGATCATCTGTTTGTTTGCCTGAGAGTAGCCAAAGAATGGGGAATATGCTACTTGATCAGCCTCAAGAAGAACGTAGCGAGGAACCACCTTCTCTACACAAGAAAGTGGTGGACTTTTCATCATCTCAATCTTCACTCCCATCTAACAAGAAGAGATCCCTAGTGTTACAAAGGTGCAAAGGAAAACATTTGAAGGTAGATGGCCATTCTGTGAACAATCATCCGAAAATGACTACAGGCCATGCACTTTCTGTGAAAAATGTGAGAGTTGGAAGAAACACAGATAACTACTCTGAGGTCAACTGTGAACAGTCCACCGCTCATCCATCATTCTC</genome_strand>
        <mrna_strand>CGATAGAGAGAAACATCACAACCTTCTGAAGTCTGCTTCTCATACTATAAAGTTTTGCTTGTCCAAGCCAGATCGCTGTCCCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGAGTGGTCAAGAGAGCACCTTTTGTCCAAGAGAAAATGTTGACCAAATGGATTGCCTAAATAAGGACCTCAGATCTGCGGACCAAATGCTATCAAATGGATTGGCCACCATAAAACAATGGGCATGTTCAAAGAGAACTGGCCTCACAAGGAAGATCACTGATAAGGACGATCATCACCTTTCTGGCGCTGATATGTCGACTGGCGTGCAGAGTGACAATGATGTGTTGCCTCACACTTATCCATTTAAAAAGAGAAGCGGGCTTGTGAAATCTCCAAGATCATCTGTTTGTTTGCCTGAGAGTAGCCCAAGAATGGGGAATATGCTACTTGATCATCCTCAAGAAGAACGTAGCGAGGAACCACCTTCTCTACACGAGAAAGTGGTGGACTTTTCATCATCTCAATCTTCTCTCCCATCTAGCAAGAAGAGATCCCTACTGTTACTCAGGCGCAAAGGAAAACATTTGAAGGTAGATGGCCATTCTGTGATCAATCATCCGAGTATGACTACAGGCCGTGCACTTTCTGTGAAAAATGTGAGAGTTGGAATAAACACATATAACTACTCTGAGGTCTACTGTGAACAGTCCACTGCTCATCCATCATTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314835" ref_strand="+" ref_description="SGN-E314835 [cTOA-20-F18]">
      <seq>ccagatcactgtcccaagattaagagtggtcaagagagcaccttttgtccaagagaaaatgttgacaaaatggattgcctaaataaggacctcagatctgcggaccagatgctatcaaatggattggcaaccataaaacaatgggcatgttcaaagagaactggcctcacaaggaagatcagtgataaggacaatcatcagctttctggcgctgatatgtcgactggcgtgcaaagtgacaatgatgtgttgcctcagacttatccatttaaaaagagaagcggtcttgtgaaatctccaagatcatctgtttgtttgcctgagagtagccaaagaatggggaatatgctacttgatcagcctcaagaagaacgtagcgaggaaccaccttctctacacaagaaagtggtggacttttcatcatctcaatcttcactcccatctaacaagaagagatccctagtgttacaaaggtgcaaaggaaaacatttgaaggtagatggccattctgtgaacaatcatccgaaaatgactacaggccatgcactttctgtgaaaaatgtgagagttggaagaaacacagataactactctgaggtcaactgtgaacagtccaccgctcatccatcattctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="-" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="117515" stop="115892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117215" g_stop="117198" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117197" i_stop="116809" i_length="389">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116808" g_stop="116192" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="635" r_length="617" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="-" ref_id="SGN-E314835" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117215" e_stop="117198"/>
          <exon e_start="116808" e_stop="116192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGATCACTGTCCCAAGGTATGTTTTTAAAATCCTGGACATAAAGAAGTTCCCTCAGGTTTTGTTTTGTTCTTGAAACCCATCTTTTATCTAGTACATCTCATCTTCGAAAATTTCATTGCTTCCGAAACTGTAGCACTATAGTGCAGTAATGCTACTGCAAAATTTTAGGAGCGGAAAACAAAAGAATATTGGGAGAGCAATGTTAAACATCTCTTTCTGCACTTTGCCCTTCATGTTCGCTTAATTTCATGATTGTTTTGGTAAATTTGGTGGAAAGGAGGGGCGGGTGCAGGTGGGGTTTCATTTATCTTTTATCAAAAATATTTTGTTTGTACCAATTAGCAATCCTAGTATGTAATATATTAATTTGCTTTGAACTAAGTTGCTAAATATTTTATGAACAGATTAAGAGTGGTCAAGAGAGCACCTTTTGTCCAAGAGAAAATGTTGACAAAATGGATTGCCTAAATAAGGACCTCAGATCTGCGGACCAGATGCTATCAAATGGATTGGCAACCATAAAACAATGGGCATGTTCAAAGAGAACTGGCCTCACAAGGAAGATCAGTGATAAGGACAATCATCAGCTTTCTGGCGCTGATATGTCGACTGGCGTGCAAAGTGACAATGATGTGTTGCCTCAGACTTATCCATTTAAAAAGAGAAGCGGTCTTGTGAAATCTCCAAGATCATCTGTTTGTTTGCCTGAGAGTAGCCAAAGAATGGGGAATATGCTACTTGATCAGCCTCAAGAAGAACGTAGCGAGGAACCACCTTCTCTACACAAGAAAGTGGTGGACTTTTCATCATCTCAATCTTCACTCCCATCTAACAAGAAGAGATCCCTAGTGTTACAAAGGTGCAAAGGAAAACATTTGAAGGTAGATGGCCATTCTGTGAACAATCATCCGAAAATGACTACAGGCCATGCACTTTCTGTGAAAAATGTGAGAGTTGGAAGAAACACAGATAACTACTCTGAGGTCAACTGTGAACAGTCCACCGCTCATCCATCATTCTC</genome_strand>
        <mrna_strand>CCAGATCACTGTCCCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGAGTGGTCAAGAGAGCACCTTTTGTCCAAGAGAAAATGTTGACAAAATGGATTGCCTAAATAAGGACCTCAGATCTGCGGACCAGATGCTATCAAATGGATTGGCAACCATAAAACAATGGGCATGTTCAAAGAGAACTGGCCTCACAAGGAAGATCAGTGATAAGGACAATCATCAGCTTTCTGGCGCTGATATGTCGACTGGCGTGCAAAGTGACAATGATGTGTTGCCTCAGACTTATCCATTTAAAAAGAGAAGCGGTCTTGTGAAATCTCCAAGATCATCTGTTTGTTTGCCTGAGAGTAGCCAAAGAATGGGGAATATGCTACTTGATCAGCCTCAAGAAGAACGTAGCGAGGAACCACCTTCTCTACACAAGAAAGTGGTGGACTTTTCATCATCTCAATCTTCACTCCCATCTAACAAGAAGAGATCCCTAGTGTTACAAAGGTGCAAAGGAAAACATTTGAAGGTAGATGGCCATTCTGTGAACAATCATCCGAAAATGACTACAGGCCATGCACTTTCTGTGAAAAATGTGAGAGTTGGAAGAAACACAGATAACTACTCTGAGGTCAACTGTGAACAGTCCACCGCTCATCCATCATTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467353" ref_strand="+" ref_description="SGN-E467353 [cSTB-48-D15]">
      <seq>gttgttaaatttacactcaattttgtaatgcatgctggtagaatcgccggtaatcctccgacgaaaagccggtgaaaaattcgtcagaaatgtcgggaggggagtacggcgatcacaacattttgttacgttctacttcatcggcgtcggaaggcgatgtggagagccagtcgtctccgaggagaacgaatacaagaagcattaaggatctattgaagcggttagatcgaggattttctggtcggcgatcatcggttagggatcaccaccactcctcgtcgccttcgccttctaatcgccgcggtgtttcatctactgcggatgaaattctaggtgatagtgctccgccggaatgggcgatgttgcttgttggatgtctccttggccttgctactggccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0309F18-vObdg/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0309F18.1" temp_strand="+" temp_description="C07HBa0309F18.1  AC210366.3 htgs_phase:3 submitted_to_sgn_as:C07HBa0309F18 upload_account_name:france">
        <position start="128210" stop="128973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128510" g_stop="128911" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0309F18.1" gen_strand="+" ref_id="SGN-E467353" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0309F18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128510" e_stop="128911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTAAATTTACACTCAATTTCGTAATGCATGCTGGTGGAATCGCCGGTTATCCTCCGACGAAAAGCCGGTGAAAAATTCCTCAGAAATGTCGGGAGGGGAGTACGGGGATCACAACATTTTGTTACGTTCTACTTCATCGGCGTCGGAAGGCGATGTGGAAAGCCAGTCATCGCCGAGGAGAACGAATACCAGAAGCATTAAGGATCTATTGAAGAGGTTAGATCGAGGATTTTCTGGTCGGCGATCATCGGATAGGGATCATCACCACTCCTCGTCGCCTTCGCCTTCTAATCGCCGCGGTGTTTCATCTACTGCGGATGAAATTCTAGGGGATAGTGCTCCGCCGGAATGGGCGATGTTGCTTGTTGGATGTCTCCTTGGCCTTGCTACTGGCCTTT</genome_strand>
        <mrna_strand>GTTGTTAAATTTACACTCAATTTTGTAATGCATGCTGGTAGAATCGCCGGTAATCCTCCGACGAAAAGCCGGTGAAAAATTCGTCAGAAATGTCGGGAGGGGAGTACGGCGATCACAACATTTTGTTACGTTCTACTTCATCGGCGTCGGAAGGCGATGTGGAGAGCCAGTCGTCTCCGAGGAGAACGAATACAAGAAGCATTAAGGATCTATTGAAGCGGTTAGATCGAGGATTTTCTGGTCGGCGATCATCGGTTAGGGATCACCACCACTCCTCGTCGCCTTCGCCTTCTAATCGCCGCGGTGTTTCATCTACTGCGGATGAAATTCTAGGTGATAGTGCTCCGCCGGAATGGGCGATGTTGCTTGTTGGATGTCTCCTTGGCCTTGCTACTGGCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>230</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1143" PGL_stop="2842"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1143" e_stop="1203"/>
            <exon e_start="2174" e_stop="2388"/>
            <exon e_start="2527" e_stop="2660"/>
            <exon e_start="2750" e_stop="2842"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.811" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1143" e_stop="1203" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.811">
            <gDNA_intron_boundary i_start="1204" i_stop="2173" i_length="970"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2174" e_stop="2388" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.965">
            <gDNA_intron_boundary i_start="2389" i_stop="2526" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2527" e_stop="2660" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.998">
            <gDNA_intron_boundary i_start="2661" i_stop="2749" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2750" e_stop="2842" e_length="93"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1143" stop="1203"/>
              <exon start="2174" stop="2388"/>
              <exon start="2527" stop="2660"/>
              <exon start="2750" stop="2842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334889" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCGTATAAATTTCATCAAGCTTGCAATTATATATACAATTACATCCGCCTCCAGCATACA : AGCTATCCAGAAATCAAACTGCTATCATGATCAAGGTCACAAGGCTACCTGTGGATATGAAAGTACTAGGTATATGGTAATATTTGGATTAATCCAAGTTATAGTGTCTCAAATTCCTGATTTTCCGAATATGAAGTGGCTCTCCGTAGTTGCTGCTGTCATGTCCTTCACATATTCAATTATCGGATCAGCACTTGGCTTAGCCAAAGTAATAG : AAAATGGAGAAATCAAAGGAAGCATTACAGGACTGCCAAGTTCTACAGCTGCTGAGAAAGTATGGTTGGTTGCTCAAGCGCTCGGGAACATTGCCTTTGCCTTTCCATTCTCTCTTATATTTCTGGAGGTTCAG : GACACATTAAAGGCACCTCCTCCAGAAAAGATCACCATGAAGAAGGTCTCAATTATGACATCCTGTATTACAACTTTTTTCTACCTTTGCTGT</gDNA_template>
            <first_frame> F  V  *  I  S  S  S  L  Q  L  Y  I  Q  L  H  P  P  P  A  Y   : K  L  S  R  N  Q  T  A  I  M  I  K  V  T  R  L  P  V  D  M  K  V  L  G  I  W  *  Y  L  D  *  S  K  L  *  C  L  K  F  L  I  F  R  I  *  S  G  S  P  *  L  L  L  S  C  P  S  H  I  Q  L  S  D  Q  H  L  A  *  P  K  *  *  :  K  M  E  K  S  K  E  A  L  Q  D  C  Q  V  L  Q  L  L  R  K  Y  G  W  L  L  K  R  S  G  T  L  P  L  P  F  H  S  L  L  Y  F  W  R  F  R :   T  H  *  R  H  L  L  Q  K  R  S  P  *  R  R  S  Q  L  *  H  P  V  L  Q  L  F  S  T  F  A   </first_frame>
            <second_frame>  S  Y  K  F  H  Q  A  C  N  Y  I  Y  N  Y  I  R  L  Q  H  T  :  S  Y  P  E  I  K  L  L  S  *  S  R  S  Q  G  Y  L  W  I  *  K  Y  *  V  Y  G  N  I  W  I  N  P  S  Y  S  V  S  N  S  *  F  S  E  Y  E  V  A  L  R  S  C  C  C  H  V  L  H  I  F  N  Y  R  I  S  T  W  L  S  Q  S  N  R :   K  W  R  N  Q  R  K  H  Y  R  T  A  K  F  Y  S  C  *  E  S  M  V  G  C  S  S  A  R  E  H  C  L  C  L  S  I  L  S  Y  I  S  G  G  S   : G  H  I  K  G  T  S  S  R  K  D  H  H  E  E  G  L  N  Y  D  I  L  Y  Y  N  F  F  L  P  L  L  </second_frame>
            <third_frame>   R  I  N  F  I  K  L  A  I  I  Y  T  I  T  S  A  S  S  I  Q :   A  I  Q  K  S  N  C  Y  H  D  Q  G  H  K  A  T  C  G  Y  E  S  T  R  Y  M  V  I  F  G  L  I  Q  V  I  V  S  Q  I  P  D  F  P  N  M  K  W  L  S  V  V  A  A  V  M  S  F  T  Y  S  I  I  G  S  A  L  G  L  A  K  V  I   : E  N  G  E  I  K  G  S  I  T  G  L  P  S  S  T  A  A  E  K  V  W  L  V  A  Q  A  L  G  N  I  A  F  A  F  P  F  S  L  I  F  L  E  V  Q  :  D  T  L  K  A  P  P  P  E  K  I  T  M  K  K  V  S  I  M  T  S  C  I  T  T  F  F  Y  L  C  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1145" stop="1203"/>
                    <exon start="2174" stop="2388"/>
                    <exon start="2527" stop="2660"/>
                    <exon start="2750" stop="2842"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RINFIKLAIIYTITSASSIQAIQKSNCYHDQGHKATCGYESTRYMVIFGLIQVIVSQIPDFPNMKWLSVVAAVMSFTYSIIGSALGLAKVIENGEIKGSITGLPSSTAAEKVWLVAQALGNIAFAFPFSLIFLEVQDTLKAPPPEKITMKKVSIMTSCITTFFYLCC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3883" PGL_stop="4220"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3883" e_stop="4220"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="3883" e_stop="4220" e_length="338"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3883" stop="4220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3883" stop="4220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3884" stop="4220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACTCAGAAAAGAATTGAAAGTTGGAAAAGCAAAGCTATCATGCTTCGCGTCTTTACAATGGTATGTCTGGTTGTGATATTGTACGCATTTGTTGGGTCTATCAGAGGAGTTATTGTTGCTAGGTTCAGGTAAAAATGCTTCTTCACGTTTCTACAAGGTTTGCGTACATGCTATCCTCTCCGAACCCCCACTTGTGAGATTATACTAGATATGTTATTTAAAAAAGAAATGTAAATAAATTCTTTATAGTTTTAAAATGTTCGGTATGTAAACAATGCCTTACGTTGTCAACAACCAAATATGTATTATAAAATTTCATCGATTTTCGTGTACTATA</gDNA_template>
            <first_frame> N  S  E  K  N  *  K  L  E  K  Q  S  Y  H  A  S  R  L  Y  N  G  M  S  G  C  D  I  V  R  I  C  W  V  Y  Q  R  S  Y  C  C  *  V  Q  V  K  M  L  L  H  V  S  T  R  F  A  Y  M  L  S  S  P  N  P  H  L  *  D  Y  T  R  Y  V  I  *  K  R  N  V  N  K  F  F  I  V  L  K  C  S  V  C  K  Q  C  L  T  L  S  T  T  K  Y  V  L  *  N  F  I  D  F  R  V  L   </first_frame>
            <second_frame>  T  Q  K  R  I  E  S  W  K  S  K  A  I  M  L  R  V  F  T  M  V  C  L  V  V  I  L  Y  A  F  V  G  S  I  R  G  V  I  V  A  R  F  R  *  K  C  F  F  T  F  L  Q  G  L  R  T  C  Y  P  L  R  T  P  T  C  E  I  I  L  D  M  L  F  K  K  E  M  *  I  N  S  L  *  F  *  N  V  R  Y  V  N  N  A  L  R  C  Q  Q  P  N  M  Y  Y  K  I  S  S  I  F  V  Y  Y  </second_frame>
            <third_frame>   L  R  K  E  L  K  V  G  K  A  K  L  S  C  F  A  S  L  Q  W  Y  V  W  L  *  Y  C  T  H  L  L  G  L  S  E  E  L  L  L  L  G  S  G  K  N  A  S  S  R  F  Y  K  V  C  V  H  A  I  L  S  E  P  P  L  V  R  L  Y  *  I  C  Y  L  K  K  K  C  K  *  I  L  Y  S  F  K  M  F  G  M  *  T  M  P  Y  V  V  N  N  Q  I  C  I  I  K  F  H  R  F  S  C  T  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0309F18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="17617" PGL_stop="9286"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17617" e_stop="16856"/>
            <exon e_start="15938" e_stop="15657"/>
            <exon e_start="15579" e_stop="15484"/>
            <exon e_start="14031" e_stop="13853"/>
            <exon e_start="13600" e_stop="13519"/>
            <exon e_start="12670" e_stop="12546"/>
            <exon e_start="11563" e_stop="11471"/>
            <exon e_start="10147" e_stop="9994"/>
            <exon e_start="9601" e_stop="9286"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.921" e_score="0.993"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.776" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.713" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="17617" e_stop="16856" e_length="762"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.921">
            <gDNA_intron_boundary i_start="16855" i_stop="15939" i_length="917"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15938" e_stop="15657" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15579" e_stop="15484" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="14031" e_stop="13853" e_length="179"/>
          </exon>
          <intron i_serial="4" don_prob="0.776" acc_prob="0.986">
            <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13600" e_stop="13519" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="12670" e_stop="12546" e_length="125"/>
          </exon>
          <intron i_serial="6" don_prob="0.951" acc_prob="0.981">
            <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="11563" e_stop="11471" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.713">
            <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="10147" e_stop="9994" e_length="154"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392"/>
          </intron>
          <exon e_serial="9" e_score="0.981">
            <gDNA_exon_boundary e_start="9601" e_stop="9286" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17617" stop="16864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17616" stop="17055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17562" stop="17011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17192" stop="16856"/>
              <exon start="15938" stop="15674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17168" stop="16856"/>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17127" stop="16856"/>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17091" stop="16856"/>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17088" stop="16867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258104" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15884" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15876" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="10064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15865" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14014" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13573" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13535" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATAAATTCAAGTCTTCTCTCGAAGAAGCTTTAAGTAATATATTCCAGGAAGAGGGGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTTTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAGTGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAA : GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG : CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAG : GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG : GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG : GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG : AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG : TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG : GTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTTATGTTTGATTTGCTTAGTTATCACCAGTAATTATTTCA</gDNA_template>
            <first_frame> D  K  F  K  S  S  L  E  E  A  L  S  N  I  F  Q  E  E  G  F  F  N  E  T  L  N  S  L  S  H  V  H  I  I  D  T  D  G  A  S  S  K  G  N  H  G  T  S  S  F  Q  S  V  A  D  K  S  I  T  R  F  Y  F  E  F  S  S  S  W  P  R  T  P  N  W  I  S  L  F  G  N  D  T  F  Y  S  S  F  A  R  I  F  K  R  L  V  Q  E  C  G  A  P  V  I  L  A  L  K  D  A  L  A  D  Y  I  N  A  K  E  R  T  K  Q  C  V  A  A  E  A  V  A  G  V  L  H  S  D  V  S  G  V  S  E  A  W  D  S  W  L  M  T  H  F  Q  S  I  I  Q  A  P  T  V  E  S  I  P  E  W  A  A  C  I  R  Y  A  V  T  G  K  G  K  H  G  T  K  I  P  L  L  R  Q  K  V  M  D  C  L  M  N  P  L  P  E  T  V  S  T  T  V  V  A  K  R  Y  M  F  L  S  A  A  L  I  E  V  S  P  P  K  M  P  V  T  E  L  A  L  H  Y  K  L  L  E  E  L  L  G  S  M  S  H  S  S  P  Q  :  V  R  E  S  I  G  V  T  L  S  V  L  C  S  N  I  R  L  Q  V  S  C  N  Q  A  H  P  H  E  V  G  T  S  N  V  N  R  K  V  E  A  G  N  W  D  H  Y  L  V  E  R  A  S  E  L  V  V  K  I  Q  S  F  S  Q  S  D  T  L  D  V  Q  T  D  M  I  S  D  N  G  V  L  T  E  Q  S  H  D  D  V  K  W  M  E  T  :  L  F  H  F  I  I  S  S  L  K  S  G  R  S  S  V  L  L  D  V  V  V  G  L  L  Y  P  V  I  S  L  Q  :  E  T  S  N  K  D  L  S  T  L  A  K  I  A  F  E  L  L  K  W  R  V  Y  S  E  S  H  L  R  K  V  V  L  T  I  L  S  I  A  N  D  T  N  W  R  T  R  S  T  T  L  T  Y  L  R  S  F  M  Y  R :   H  T  F  V  L  S  K  V  D  K  Q  Q  I  W  Q  T  V  E  K  L  L  A  D  N  Q  V  E  :  V  R  E  H  A  A  A  V  L  A  G  L  M  K  G  G  D  E  D  L  A  Q  D  F  R  H  R  A  Y  T  E  A  S  I  I  Q  K  K  R  K  Q  R :   S  M  R  S  G  F  S  V  A  S  L  H  G  K  I  L  A  L  A  A  C  V  L  S  V  P  Y  D  I  P  S :   W  L  P  E  Q  V  T  L  L  A  Q  F  V  S  E  S  S  P  V  K  S  T  V  T  K  A  V  A  E  F  R  R  T  H  A  D  T  W  N  V  Q  K  D  S  F  T  E  E  Q  L  E  :  V  L  A  D  T  S  S  S  S  S  Y  F  A  *  H  S  W  C  A  L  H  E  R  *  N  Y  T  I  S  Y  I  S  Y  I  V  S  G  K  S  P  S  L  K  L  N  Y  K  N  A  H  T  I  F  Y  *  K  F  C  S  T  L  K  I  K  R  K  N  F  *  T  E  N  H  S  F  S  T  L  N  L  N  V  E  N  C  V  V  I  F  P  Q  L  L  C  L  I  C  L  V  I  T  S  N  Y  F  </first_frame>
            <second_frame>  I  N  S  S  L  L  S  K  K  L  *  V  I  Y  S  R  K  R  G  F  S  M  K  P  *  I  V  F  L  M  F  I  *  L  T  L  M  V  L  L  L  K  E  I  M  A  P  P  H  F  R  V  W  L  T  N  P  L  L  D  F  I  L  N  F  L  H  H  G  P  V  L  P  I  G  Y  L  C  L  E  M  T  H  S  T  Q  A  L  P  E  F  L  N  V  *  Y  R  N  V  V  L  L  L  Y  W  H  *  K  M  H  *  Q  T  T  *  M  Q  R  R  G  Q  S  S  V  L  L  L  R  Q  W  Q  V  C  Y  I  L  M  F  P  V  F  Q  K  H  G  I  A  G  *  *  P  I  F  R  V  L  F  K  H  Q  Q  L  S  P  Y  L  S  G  L  L  V  F  V  M  Q  L  L  E  K  E  N  M  E  Q  K  F  H  S  *  D  K  R  S  W  T  V  *  *  T  P  C  L  K  Q  L  V  L  L  *  L  P  S  D  T  C  F  F  Q  L  H  *  *  K  F  P  H  Q  K  C  Q  L  L  N  *  R  F  T  I  S  F  L  K  N  C  L  A  V  *  A  I  H  L  H  K :   *  G  N  P  L  V  S  P  S  L  F  Y  A  Q  T  F  G  S  R  C  P  A  I  K  L  I  H  M  K  *  E  Q  V  M  *  T  G  K  L  K  Q  G  I  G  I  I  I  *  *  N  V  H  L  S  L  W  *  R  S  K  V  L  A  S  Q  T  L  W  M  C  K  R  T  *  F  L  T  M  E  Y  *  P  N  S  L  M  M  M  L  N  G  W  R  R :   Y  F  I  S  L  S  H  L  *  S  Q  E  D  P  R  F  C  W  M  L  L  L  V  F  C  I  L  *  Y  L  Y  R :   R  R  Q  I  R  I  C  R  H  W  P  K  *  L  L  N  C  *  S  G  E  F  I  Q  S  P  I  *  G  K  L  C  S  P  F  F  L  *  P  M  I  P  I  G  V  Q  D  L  R  L  *  P  I  Y  G  V  S  C  I   : G  T  L  S  S  S  L  R  W  T  N  N  K  F  G  K  L  S  R  S  Y  S  Q  I  I  K  L  R :   *  G  S  M  R  Q  Q  S  W  L  A  *  *  R  A  E  M  K  I  *  L  R  I  S  V  I  E  L  I  Q  K  Q  V  S  F  R  R  R  G  N  K   : E  A  C  V  L  D  S  L  *  H  P  Y  M  E  R  Y  L  L  W  L  L  A  C  Y  Q  F  L  M  I  F  P   : V  G  Y  Q  N  R  L  H  Y  W  L  N  L  F  L  N  H  H  L  *  N  L  P  *  Q  K  L  W  Q  S  F  D  A  L  M  R  T  H  G  M  F  R  K  I  P  S  L  K  N  N  L  R :   S  W  L  I  H  H  H  P  H  H  T  L  L  D  I  H  G  V  P  Y  M  R  D  R  I  I  P  Y  H  I  S  H  I  L  *  V  G  S  L  Q  V  *  S  *  T  T  K  M  L  I  Q  F  F  I  K  N  F  V  L  H  *  K  L  K  E  K  T  F  R  Q  K  I  I  H  F  L  H  *  I  *  T  *  K  I  V  L  S  S  S  H  N  C  Y  V  *  F  A  *  L  S  P  V  I  I  S </second_frame>
            <third_frame>   *  I  Q  V  F  S  R  R  S  F  K  *  Y  I  P  G  R  G  V  F  Q  *  N  P  E  *  S  F  S  C  S  Y  N  *  H  *  W  C  F  F  *  R  K  S  W  H  L  L  I  S  E  C  G  *  Q  I  H  Y  S  I  L  F  *  I  F  F  I  M  A  P  Y  S  Q  L  D  I  F  V  W  K  *  H  I  L  L  K  L  C  P  N  F  *  T  F  S  T  G  M  W  C  S  C  Y  T  G  T  K  R  C  I  S  R  L  H  K  C  K  G  E  D  K  A  V  C  C  C  *  G  S  G  R  C  A  T  F  *  C  F  R  C  F  R  S  M  G  *  L  V  D  D  P  F  S  E  Y  Y  S  S  T  N  S  *  V  H  T  *  V  G  C  L  Y  S  L  C  S  Y  W  K  R  K  T  W  N  K  N  S  T  L  E  T  K  G  H  G  L  F  N  E  P  L  A  *  N  S  *  Y  Y  C  S  C  Q  A  I  H  V  S  F  S  C  T  N  R  S  F  P  T  K  N  A  S  Y  *  T  S  A  S  L  *  A  S  *  R  I  A  W  Q  Y  E  P  F  I  S  T   : S  E  G  I  H  W  C  H  P  L  C  F  M  L  K  H  S  A  P  G  V  L  Q  S  S  S  S  T  *  S  R  N  K  *  C  E  Q  E  S  *  S  R  E  L  G  S  L  S  S  R  T  C  I  *  A  C  G  E  D  P  K  F  *  P  V  R  H  S  G  C  A  N  G  H  D  F  *  Q  W  S  I  N  R  T  V  S  *  *  C  *  M  D  G  D   : A  I  S  F  H  Y  L  I  S  K  V  R  K  I  L  G  S  A  G  C  C  C  W  S  F  V  S  C  N  I  S  T   : G  D  V  K  *  G  F  V  D  T  G  Q  N  S  F  *  I  A  K  V  E  S  L  F  R  V  P  F  K  E  S  C  A  H  H  S  F  Y  S  Q  *  Y  Q  L  A  Y  K  I  Y  D  S  D  L  F  T  E  F  H  V  *  :  A  H  F  R  P  L  *  G  G  Q  T  T  N  L  A  N  C  R  E  A  T  R  R  *  S  S  *   : G  K  G  A  C  G  S  S  L  G  W  P  N  E  G  R  R  *  R  F  S  S  G  F  P  S  *  S  L  Y  R  S  K  Y  H  S  E  E  E  E  T  K  :  K  H  A  F  W  I  L  C  S  I  P  T  W  K  D  T  C  F  G  C  L  R  A  I  S  S  L  *  Y  S  Q  :  L  V  T  R  T  G  Y  T  I  G  S  I  C  F  *  I  I  T  C  K  I  Y  R  D  K  S  C  G  R  V  S  T  H  S  C  G  H  M  E  C  S  E  R  F  L  H  *  R  T  T  *   : G  P  G  *  Y  I  I  I  L  I  I  L  C  L  T  F  M  V  C  L  T  *  E  I  E  L  Y  H  I  I  Y  L  I  Y  C  K  W  E  V  S  K  S  K  V  E  L  Q  K  C  S  Y  N  F  L  L  K  I  L  F  Y  T  K  N  *  K  K  K  L  L  D  R  K  S  F  I  F  Y  I  E  F  E  R  R  K  L  C  C  H  L  P  T  I  V  M  F  D  L  L  S  Y  H  Q  *  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17617" stop="16856"/>
                    <exon start="15938" stop="15657"/>
                    <exon start="15579" stop="15484"/>
                    <exon start="14031" stop="13853"/>
                    <exon start="13600" stop="13519"/>
                    <exon start="12670" stop="12546"/>
                    <exon start="11563" stop="11471"/>
                    <exon start="10147" stop="9994"/>
                    <exon start="9601" stop="9560"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1812</number_coding_nucleotides>
                  <number_encoded_amino_acids>604</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKFKSSLEEALSNIFQEEGFFNETLNSLSHVHIIDTDGASSKGNHGTSSFQSVADKSITRFYFEFSSSWPRTPNWISLFGNDTFYSSFARIFKRLVQECGAPVILALKDALADYINAKERTKQCVAAEAVAGVLHSDVSGVSEAWDSWLMTHFQSIIQAPTVESIPEWAACIRYAVTGKGKHGTKIPLLRQKVMDCLMNPLPETVSTTVVAKRYMFLSAALIEVSPPKMPVTELALHYKLLEELLGSMSHSSPQVRESIGVTLSVLCSNIRLQVSCNQAHPHEVGTSNVNRKVEAGNWDHYLVERASELVVKIQSFSQSDTLDVQTDMISDNGVLTEQSHDDVKWMETLFHFIISSLKSGRSSVLLDVVVGLLYPVISLQETSNKDLSTLAKIAFELLKWRVYSESHLRKVVLTILSIANDTNWRTRSTTLTYLRSFMYRHTFVLSKVDKQQIWQTVEKLLADNQVEVREHAAAVLAGLMKGGDEDLAQDFRHRAYTEASIIQKKRKQRSMRSGFSVASLHGKILALAACVLSVPYDIPSWLPEQVTLLAQFVSESSPVKSTVTKAVAEFRRTHADTWNVQKDSFTEEQLEVLADTSSSSSYFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="17617" e_stop="16856"/>
            <exon e_start="15938" e_stop="15657"/>
            <exon e_start="15579" e_stop="15357"/>
            <exon e_start="14031" e_stop="13853"/>
            <exon e_start="13600" e_stop="13519"/>
            <exon e_start="12670" e_stop="12546"/>
            <exon e_start="11563" e_stop="11471"/>
            <exon e_start="10147" e_stop="9994"/>
            <exon e_start="9601" e_stop="9286"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.921" e_score="0.993"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.590" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.776" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.713" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="17617" e_stop="16856" e_length="762"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.921">
            <gDNA_intron_boundary i_start="16855" i_stop="15939" i_length="917"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15938" e_stop="15657" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15579" e_stop="15357" e_length="223"/>
          </exon>
          <intron i_serial="3" don_prob="0.590" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15356" i_stop="14032" i_length="1325"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="14031" e_stop="13853" e_length="179"/>
          </exon>
          <intron i_serial="4" don_prob="0.776" acc_prob="0.986">
            <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13600" e_stop="13519" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="12670" e_stop="12546" e_length="125"/>
          </exon>
          <intron i_serial="6" don_prob="0.951" acc_prob="0.981">
            <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="11563" e_stop="11471" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.713">
            <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="10147" e_stop="9994" e_length="154"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392"/>
          </intron>
          <exon e_serial="9" e_score="0.981">
            <gDNA_exon_boundary e_start="9601" e_stop="9286" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17617" stop="16864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17616" stop="17055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17562" stop="17011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17192" stop="16856"/>
              <exon start="15938" stop="15674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17127" stop="16856"/>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17088" stop="16867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15357"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262894" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15357"/>
              <exon start="14031" stop="13977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15357"/>
              <exon start="14031" stop="13977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688809" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258104" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14014" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13573" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13535" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATAAATTCAAGTCTTCTCTCGAAGAAGCTTTAAGTAATATATTCCAGGAAGAGGGGTTTTTCAATGAAACCCTGAATAGTCTTTCTCATGTTCATATAATTGACACTGATGGTGCTTCTTCTAAAGGAAATCATGGCACCTCCTCATTTCAGAGTGTGGCTGACAAATCCATTACTCGATTTTATTTTGAATTTTCTTCATCATGGCCCCGTACTCCCAATTGGATATCTTTGTTTGGAAATGACACATTCTACTCAAGCTTTGCCCGAATTTTTAAACGTTTAGTACAGGAATGTGGTGCTCCTGTTATACTGGCACTAAAAGATGCATTAGCAGACTACATAAATGCAAAGGAGAGGACAAAGCAGTGTGTTGCTGCTGAGGCAGTGGCAGGTGTGCTACATTCTGATGTTTCCGGTGTTTCAGAAGCATGGGATAGCTGGTTGATGACCCATTTTCAGAGTATTATTCAAGCACCAACAGTTGAGTCCATACCTGAGTGGGCTGCTTGTATTCGTTATGCAGTTACTGGAAAAGGAAAACATGGAACAAAAATTCCACTCTTGAGACAAAAGGTCATGGACTGTTTAATGAACCCCTTGCCTGAAACAGTTAGTACTACTGTAGTTGCCAAGCGATACATGTTTCTTTCAGCTGCACTAATAGAAGTTTCCCCACCAAAAATGCCAGTTACTGAACTAGCGCTTCACTATAAGCTTCTTGAAGAATTGCTTGGCAGTATGAGCCATTCATCTCCACAA : GTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG : CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAGGTTAGTTGCAACATCACATCATTCCCGTTGCTTGTCTTTTCAGTTGTTTTGACATTTTGAAGGGATGAAATTACTGTCTGAAGAACTTGGCATATACACACTTTCCCTCCATTTACGGATGAAAATG : GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG : GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG : GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG : AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG : TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG : GTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTTATGTTTGATTTGCTTAGTTATCACCAGTAATTATTTCA</gDNA_template>
            <first_frame> D  K  F  K  S  S  L  E  E  A  L  S  N  I  F  Q  E  E  G  F  F  N  E  T  L  N  S  L  S  H  V  H  I  I  D  T  D  G  A  S  S  K  G  N  H  G  T  S  S  F  Q  S  V  A  D  K  S  I  T  R  F  Y  F  E  F  S  S  S  W  P  R  T  P  N  W  I  S  L  F  G  N  D  T  F  Y  S  S  F  A  R  I  F  K  R  L  V  Q  E  C  G  A  P  V  I  L  A  L  K  D  A  L  A  D  Y  I  N  A  K  E  R  T  K  Q  C  V  A  A  E  A  V  A  G  V  L  H  S  D  V  S  G  V  S  E  A  W  D  S  W  L  M  T  H  F  Q  S  I  I  Q  A  P  T  V  E  S  I  P  E  W  A  A  C  I  R  Y  A  V  T  G  K  G  K  H  G  T  K  I  P  L  L  R  Q  K  V  M  D  C  L  M  N  P  L  P  E  T  V  S  T  T  V  V  A  K  R  Y  M  F  L  S  A  A  L  I  E  V  S  P  P  K  M  P  V  T  E  L  A  L  H  Y  K  L  L  E  E  L  L  G  S  M  S  H  S  S  P  Q  :  V  R  E  S  I  G  V  T  L  S  V  L  C  S  N  I  R  L  Q  V  S  C  N  Q  A  H  P  H  E  V  G  T  S  N  V  N  R  K  V  E  A  G  N  W  D  H  Y  L  V  E  R  A  S  E  L  V  V  K  I  Q  S  F  S  Q  S  D  T  L  D  V  Q  T  D  M  I  S  D  N  G  V  L  T  E  Q  S  H  D  D  V  K  W  M  E  T  :  L  F  H  F  I  I  S  S  L  K  S  G  R  S  S  V  L  L  D  V  V  V  G  L  L  Y  P  V  I  S  L  Q  V  S  C  N  I  T  S  F  P  L  L  V  F  S  V  V  L  T  F  *  R  D  E  I  T  V  *  R  T  W  H  I  H  T  F  P  P  F  T  D  E  N   : G  D  V  K  *  G  F  V  D  T  G  Q  N  S  F  *  I  A  K  V  E  S  L  F  R  V  P  F  K  E  S  C  A  H  H  S  F  Y  S  Q  *  Y  Q  L  A  Y  K  I  Y  D  S  D  L  F  T  E  F  H  V  *  :  A  H  F  R  P  L  *  G  G  Q  T  T  N  L  A  N  C  R  E  A  T  R  R  *  S  S  *   : G  K  G  A  C  G  S  S  L  G  W  P  N  E  G  R  R  *  R  F  S  S  G  F  P  S  *  S  L  Y  R  S  K  Y  H  S  E  E  E  E  T  K  :  K  H  A  F  W  I  L  C  S  I  P  T  W  K  D  T  C  F  G  C  L  R  A  I  S  S  L  *  Y  S  Q  :  L  V  T  R  T  G  Y  T  I  G  S  I  C  F  *  I  I  T  C  K  I  Y  R  D  K  S  C  G  R  V  S  T  H  S  C  G  H  M  E  C  S  E  R  F  L  H  *  R  T  T  *   : G  P  G  *  Y  I  I  I  L  I  I  L  C  L  T  F  M  V  C  L  T  *  E  I  E  L  Y  H  I  I  Y  L  I  Y  C  K  W  E  V  S  K  S  K  V  E  L  Q  K  C  S  Y  N  F  L  L  K  I  L  F  Y  T  K  N  *  K  K  K  L  L  D  R  K  S  F  I  F  Y  I  E  F  E  R  R  K  L  C  C  H  L  P  T  I  V  M  F  D  L  L  S  Y  H  Q  *  L  F   </first_frame>
            <second_frame>  I  N  S  S  L  L  S  K  K  L  *  V  I  Y  S  R  K  R  G  F  S  M  K  P  *  I  V  F  L  M  F  I  *  L  T  L  M  V  L  L  L  K  E  I  M  A  P  P  H  F  R  V  W  L  T  N  P  L  L  D  F  I  L  N  F  L  H  H  G  P  V  L  P  I  G  Y  L  C  L  E  M  T  H  S  T  Q  A  L  P  E  F  L  N  V  *  Y  R  N  V  V  L  L  L  Y  W  H  *  K  M  H  *  Q  T  T  *  M  Q  R  R  G  Q  S  S  V  L  L  L  R  Q  W  Q  V  C  Y  I  L  M  F  P  V  F  Q  K  H  G  I  A  G  *  *  P  I  F  R  V  L  F  K  H  Q  Q  L  S  P  Y  L  S  G  L  L  V  F  V  M  Q  L  L  E  K  E  N  M  E  Q  K  F  H  S  *  D  K  R  S  W  T  V  *  *  T  P  C  L  K  Q  L  V  L  L  *  L  P  S  D  T  C  F  F  Q  L  H  *  *  K  F  P  H  Q  K  C  Q  L  L  N  *  R  F  T  I  S  F  L  K  N  C  L  A  V  *  A  I  H  L  H  K :   *  G  N  P  L  V  S  P  S  L  F  Y  A  Q  T  F  G  S  R  C  P  A  I  K  L  I  H  M  K  *  E  Q  V  M  *  T  G  K  L  K  Q  G  I  G  I  I  I  *  *  N  V  H  L  S  L  W  *  R  S  K  V  L  A  S  Q  T  L  W  M  C  K  R  T  *  F  L  T  M  E  Y  *  P  N  S  L  M  M  M  L  N  G  W  R  R :   Y  F  I  S  L  S  H  L  *  S  Q  E  D  P  R  F  C  W  M  L  L  L  V  F  C  I  L  *  Y  L  Y  R  L  V  A  T  S  H  H  S  R  C  L  S  F  Q  L  F  *  H  F  E  G  M  K  L  L  S  E  E  L  G  I  Y  T  L  S  L  H  L  R  M  K  M  :  E  T  S  N  K  D  L  S  T  L  A  K  I  A  F  E  L  L  K  W  R  V  Y  S  E  S  H  L  R  K  V  V  L  T  I  L  S  I  A  N  D  T  N  W  R  T  R  S  T  T  L  T  Y  L  R  S  F  M  Y  R :   H  T  F  V  L  S  K  V  D  K  Q  Q  I  W  Q  T  V  E  K  L  L  A  D  N  Q  V  E  :  V  R  E  H  A  A  A  V  L  A  G  L  M  K  G  G  D  E  D  L  A  Q  D  F  R  H  R  A  Y  T  E  A  S  I  I  Q  K  K  R  K  Q  R :   S  M  R  S  G  F  S  V  A  S  L  H  G  K  I  L  A  L  A  A  C  V  L  S  V  P  Y  D  I  P  S :   W  L  P  E  Q  V  T  L  L  A  Q  F  V  S  E  S  S  P  V  K  S  T  V  T  K  A  V  A  E  F  R  R  T  H  A  D  T  W  N  V  Q  K  D  S  F  T  E  E  Q  L  E  :  V  L  A  D  T  S  S  S  S  S  Y  F  A  *  H  S  W  C  A  L  H  E  R  *  N  Y  T  I  S  Y  I  S  Y  I  V  S  G  K  S  P  S  L  K  L  N  Y  K  N  A  H  T  I  F  Y  *  K  F  C  S  T  L  K  I  K  R  K  N  F  *  T  E  N  H  S  F  S  T  L  N  L  N  V  E  N  C  V  V  I  F  P  Q  L  L  C  L  I  C  L  V  I  T  S  N  Y  F  </second_frame>
            <third_frame>   *  I  Q  V  F  S  R  R  S  F  K  *  Y  I  P  G  R  G  V  F  Q  *  N  P  E  *  S  F  S  C  S  Y  N  *  H  *  W  C  F  F  *  R  K  S  W  H  L  L  I  S  E  C  G  *  Q  I  H  Y  S  I  L  F  *  I  F  F  I  M  A  P  Y  S  Q  L  D  I  F  V  W  K  *  H  I  L  L  K  L  C  P  N  F  *  T  F  S  T  G  M  W  C  S  C  Y  T  G  T  K  R  C  I  S  R  L  H  K  C  K  G  E  D  K  A  V  C  C  C  *  G  S  G  R  C  A  T  F  *  C  F  R  C  F  R  S  M  G  *  L  V  D  D  P  F  S  E  Y  Y  S  S  T  N  S  *  V  H  T  *  V  G  C  L  Y  S  L  C  S  Y  W  K  R  K  T  W  N  K  N  S  T  L  E  T  K  G  H  G  L  F  N  E  P  L  A  *  N  S  *  Y  Y  C  S  C  Q  A  I  H  V  S  F  S  C  T  N  R  S  F  P  T  K  N  A  S  Y  *  T  S  A  S  L  *  A  S  *  R  I  A  W  Q  Y  E  P  F  I  S  T   : S  E  G  I  H  W  C  H  P  L  C  F  M  L  K  H  S  A  P  G  V  L  Q  S  S  S  S  T  *  S  R  N  K  *  C  E  Q  E  S  *  S  R  E  L  G  S  L  S  S  R  T  C  I  *  A  C  G  E  D  P  K  F  *  P  V  R  H  S  G  C  A  N  G  H  D  F  *  Q  W  S  I  N  R  T  V  S  *  *  C  *  M  D  G  D   : A  I  S  F  H  Y  L  I  S  K  V  R  K  I  L  G  S  A  G  C  C  C  W  S  F  V  S  C  N  I  S  T  G  *  L  Q  H  H  I  I  P  V  A  C  L  F  S  C  F  D  I  L  K  G  *  N  Y  C  L  K  N  L  A  Y  T  H  F  P  S  I  Y  G  *  K  W :   R  R  Q  I  R  I  C  R  H  W  P  K  *  L  L  N  C  *  S  G  E  F  I  Q  S  P  I  *  G  K  L  C  S  P  F  F  L  *  P  M  I  P  I  G  V  Q  D  L  R  L  *  P  I  Y  G  V  S  C  I   : G  T  L  S  S  S  L  R  W  T  N  N  K  F  G  K  L  S  R  S  Y  S  Q  I  I  K  L  R :   *  G  S  M  R  Q  Q  S  W  L  A  *  *  R  A  E  M  K  I  *  L  R  I  S  V  I  E  L  I  Q  K  Q  V  S  F  R  R  R  G  N  K   : E  A  C  V  L  D  S  L  *  H  P  Y  M  E  R  Y  L  L  W  L  L  A  C  Y  Q  F  L  M  I  F  P   : V  G  Y  Q  N  R  L  H  Y  W  L  N  L  F  L  N  H  H  L  *  N  L  P  *  Q  K  L  W  Q  S  F  D  A  L  M  R  T  H  G  M  F  R  K  I  P  S  L  K  N  N  L  R :   S  W  L  I  H  H  H  P  H  H  T  L  L  D  I  H  G  V  P  Y  M  R  D  R  I  I  P  Y  H  I  S  H  I  L  *  V  G  S  L  Q  V  *  S  *  T  T  K  M  L  I  Q  F  F  I  K  N  F  V  L  H  *  K  L  K  E  K  T  F  R  Q  K  I  I  H  F  L  H  *  I  *  T  *  K  I  V  L  S  S  S  H  N  C  Y  V  *  F  A  *  L  S  P  V  I  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17617" stop="16856"/>
                    <exon start="15938" stop="15657"/>
                    <exon start="15579" stop="15424"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1197</number_coding_nucleotides>
                  <number_encoded_amino_acids>399</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKFKSSLEEALSNIFQEEGFFNETLNSLSHVHIIDTDGASSKGNHGTSSFQSVADKSITRFYFEFSSSWPRTPNWISLFGNDTFYSSFARIFKRLVQECGAPVILALKDALADYINAKERTKQCVAAEAVAGVLHSDVSGVSEAWDSWLMTHFQSIIQAPTVESIPEWAACIRYAVTGKGKHGTKIPLLRQKVMDCLMNPLPETVSTTVVAKRYMFLSAALIEVSPPKMPVTELALHYKLLEELLGSMSHSSPQVRESIGVTLSVLCSNIRLQVSCNQAHPHEVGTSNVNRKVEAGNWDHYLVERASELVVKIQSFSQSDTLDVQTDMISDNGVLTEQSHDDVKWMETLFHFIISSLKSGRSSVLLDVVVGLLYPVISLQVSCNITSFPLLVFSVVLTF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15431" stop="15357"/>
                    <exon start="14031" stop="13853"/>
                    <exon start="13600" stop="13519"/>
                    <exon start="12670" stop="12546"/>
                    <exon start="11563" stop="11471"/>
                    <exon start="10147" stop="9994"/>
                    <exon start="9601" stop="9560"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFEGMKLLSEELGIYTLSLHLRMKMETSNKDLSTLAKIAFELLKWRVYSESHLRKVVLTILSIANDTNWRTRSTTLTYLRSFMYRHTFVLSKVDKQQIWQTVEKLLADNQVEVREHAAAVLAGLMKGGDEDLAQDFRHRAYTEASIIQKKRKQRSMRSGFSVASLHGKILALAACVLSVPYDIPSWLPEQVTLLAQFVSESSPVKSTVTKAVAEFRRTHADTWNVQKDSFTEEQLEVLADTSSSSSYFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="15944" e_stop="15657"/>
            <exon e_start="15579" e_stop="15484"/>
            <exon e_start="14031" e_stop="13853"/>
            <exon e_start="13600" e_stop="13519"/>
            <exon e_start="12670" e_stop="12546"/>
            <exon e_start="11563" e_stop="11471"/>
            <exon e_start="10147" e_stop="9994"/>
            <exon e_start="9601" e_stop="9286"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.776" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.713" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15944" e_stop="15657" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="15656" i_stop="15580" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15579" e_stop="15484" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15483" i_stop="14032" i_length="1452"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14031" e_stop="13853" e_length="179"/>
          </exon>
          <intron i_serial="3" don_prob="0.776" acc_prob="0.986">
            <gDNA_intron_boundary i_start="13852" i_stop="13601" i_length="252"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="13600" e_stop="13519" e_length="82"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12670" e_stop="12546" e_length="125"/>
          </exon>
          <intron i_serial="5" don_prob="0.951" acc_prob="0.981">
            <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="11563" e_stop="11471" e_length="93"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.713">
            <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="10147" e_stop="9994" e_length="154"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392"/>
          </intron>
          <exon e_serial="8" e_score="0.981">
            <gDNA_exon_boundary e_start="9601" e_stop="9286" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15944" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15943" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15938" stop="15657"/>
              <exon start="15579" stop="15551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258104" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15884" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15876" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="10064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15865" stop="15657"/>
              <exon start="15579" stop="15484"/>
              <exon start="14031" stop="13853"/>
              <exon start="13600" stop="13558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14014" stop="13853"/>
              <exon start="13600" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13573" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13535" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAGGTGAGGGAATCCATTGGTGTCACCCTCTCTGTTTTATGCTCAAACATTCGGCTCCAGGTGTCCTGCAATCAAGCTCATCCACATGAAGTAGGAACAAGTAATGTGAACAGGAAAGTTGAAGCAGGGAATTGGGATCATTATCTAGTAGAACGTGCATCTGAGCTTGTGGTGAAGATCCAAAGTTTTAGCCAGTCAGACACTCTGGATGTGCAAACGGACATGATTTCTGACAATGGAGTATTAACCGAACAGTCTCATGATGATGTTAAATGGATGGAGACG : CTATTTCATTTCATTATCTCATCTCTAAAGTCAGGAAGATCCTCGGTTCTGCTGGATGTTGTTGTTGGTCTTTTGTATCCTGTAATATCTCTACAG : GAGACGTCAAATAAGGATTTGTCGACACTGGCCAAAATAGCTTTTGAATTGCTAAAGTGGAGAGTTTATTCAGAGTCCCATTTAAGGAAAGTTGTGCTCACCATTCTTTCTATAGCCAATGATACCAATTGGCGTACAAGATCTACGACTCTGACCTATTTACGGAGTTTCATGTATAG : GCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG : GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG : AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG : TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG : GTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTTATGTTTGATTTGCTTAGTTATCACCAGTAATTATTTCA</gDNA_template>
            <first_frame> E  Q  V  R  E  S  I  G  V  T  L  S  V  L  C  S  N  I  R  L  Q  V  S  C  N  Q  A  H  P  H  E  V  G  T  S  N  V  N  R  K  V  E  A  G  N  W  D  H  Y  L  V  E  R  A  S  E  L  V  V  K  I  Q  S  F  S  Q  S  D  T  L  D  V  Q  T  D  M  I  S  D  N  G  V  L  T  E  Q  S  H  D  D  V  K  W  M  E  T  :  L  F  H  F  I  I  S  S  L  K  S  G  R  S  S  V  L  L  D  V  V  V  G  L  L  Y  P  V  I  S  L  Q  :  E  T  S  N  K  D  L  S  T  L  A  K  I  A  F  E  L  L  K  W  R  V  Y  S  E  S  H  L  R  K  V  V  L  T  I  L  S  I  A  N  D  T  N  W  R  T  R  S  T  T  L  T  Y  L  R  S  F  M  Y  R :   H  T  F  V  L  S  K  V  D  K  Q  Q  I  W  Q  T  V  E  K  L  L  A  D  N  Q  V  E  :  V  R  E  H  A  A  A  V  L  A  G  L  M  K  G  G  D  E  D  L  A  Q  D  F  R  H  R  A  Y  T  E  A  S  I  I  Q  K  K  R  K  Q  R :   S  M  R  S  G  F  S  V  A  S  L  H  G  K  I  L  A  L  A  A  C  V  L  S  V  P  Y  D  I  P  S :   W  L  P  E  Q  V  T  L  L  A  Q  F  V  S  E  S  S  P  V  K  S  T  V  T  K  A  V  A  E  F  R  R  T  H  A  D  T  W  N  V  Q  K  D  S  F  T  E  E  Q  L  E  :  V  L  A  D  T  S  S  S  S  S  Y  F  A  *  H  S  W  C  A  L  H  E  R  *  N  Y  T  I  S  Y  I  S  Y  I  V  S  G  K  S  P  S  L  K  L  N  Y  K  N  A  H  T  I  F  Y  *  K  F  C  S  T  L  K  I  K  R  K  N  F  *  T  E  N  H  S  F  S  T  L  N  L  N  V  E  N  C  V  V  I  F  P  Q  L  L  C  L  I  C  L  V  I  T  S  N  Y  F  </first_frame>
            <second_frame>  N  R  *  G  N  P  L  V  S  P  S  L  F  Y  A  Q  T  F  G  S  R  C  P  A  I  K  L  I  H  M  K  *  E  Q  V  M  *  T  G  K  L  K  Q  G  I  G  I  I  I  *  *  N  V  H  L  S  L  W  *  R  S  K  V  L  A  S  Q  T  L  W  M  C  K  R  T  *  F  L  T  M  E  Y  *  P  N  S  L  M  M  M  L  N  G  W  R  R :   Y  F  I  S  L  S  H  L  *  S  Q  E  D  P  R  F  C  W  M  L  L  L  V  F  C  I  L  *  Y  L  Y  R :   R  R  Q  I  R  I  C  R  H  W  P  K  *  L  L  N  C  *  S  G  E  F  I  Q  S  P  I  *  G  K  L  C  S  P  F  F  L  *  P  M  I  P  I  G  V  Q  D  L  R  L  *  P  I  Y  G  V  S  C  I   : G  T  L  S  S  S  L  R  W  T  N  N  K  F  G  K  L  S  R  S  Y  S  Q  I  I  K  L  R :   *  G  S  M  R  Q  Q  S  W  L  A  *  *  R  A  E  M  K  I  *  L  R  I  S  V  I  E  L  I  Q  K  Q  V  S  F  R  R  R  G  N  K   : E  A  C  V  L  D  S  L  *  H  P  Y  M  E  R  Y  L  L  W  L  L  A  C  Y  Q  F  L  M  I  F  P   : V  G  Y  Q  N  R  L  H  Y  W  L  N  L  F  L  N  H  H  L  *  N  L  P  *  Q  K  L  W  Q  S  F  D  A  L  M  R  T  H  G  M  F  R  K  I  P  S  L  K  N  N  L  R :   S  W  L  I  H  H  H  P  H  H  T  L  L  D  I  H  G  V  P  Y  M  R  D  R  I  I  P  Y  H  I  S  H  I  L  *  V  G  S  L  Q  V  *  S  *  T  T  K  M  L  I  Q  F  F  I  K  N  F  V  L  H  *  K  L  K  E  K  T  F  R  Q  K  I  I  H  F  L  H  *  I  *  T  *  K  I  V  L  S  S  S  H  N  C  Y  V  *  F  A  *  L  S  P  V  I  I  S </second_frame>
            <third_frame>   T  G  E  G  I  H  W  C  H  P  L  C  F  M  L  K  H  S  A  P  G  V  L  Q  S  S  S  S  T  *  S  R  N  K  *  C  E  Q  E  S  *  S  R  E  L  G  S  L  S  S  R  T  C  I  *  A  C  G  E  D  P  K  F  *  P  V  R  H  S  G  C  A  N  G  H  D  F  *  Q  W  S  I  N  R  T  V  S  *  *  C  *  M  D  G  D   : A  I  S  F  H  Y  L  I  S  K  V  R  K  I  L  G  S  A  G  C  C  C  W  S  F  V  S  C  N  I  S  T   : G  D  V  K  *  G  F  V  D  T  G  Q  N  S  F  *  I  A  K  V  E  S  L  F  R  V  P  F  K  E  S  C  A  H  H  S  F  Y  S  Q  *  Y  Q  L  A  Y  K  I  Y  D  S  D  L  F  T  E  F  H  V  *  :  A  H  F  R  P  L  *  G  G  Q  T  T  N  L  A  N  C  R  E  A  T  R  R  *  S  S  *   : G  K  G  A  C  G  S  S  L  G  W  P  N  E  G  R  R  *  R  F  S  S  G  F  P  S  *  S  L  Y  R  S  K  Y  H  S  E  E  E  E  T  K  :  K  H  A  F  W  I  L  C  S  I  P  T  W  K  D  T  C  F  G  C  L  R  A  I  S  S  L  *  Y  S  Q  :  L  V  T  R  T  G  Y  T  I  G  S  I  C  F  *  I  I  T  C  K  I  Y  R  D  K  S  C  G  R  V  S  T  H  S  C  G  H  M  E  C  S  E  R  F  L  H  *  R  T  T  *   : G  P  G  *  Y  I  I  I  L  I  I  L  C  L  T  F  M  V  C  L  T  *  E  I  E  L  Y  H  I  I  Y  L  I  Y  C  K  W  E  V  S  K  S  K  V  E  L  Q  K  C  S  Y  N  F  L  L  K  I  L  F  Y  T  K  N  *  K  K  K  L  L  D  R  K  S  F  I  F  Y  I  E  F  E  R  R  K  L  C  C  H  L  P  T  I  V  M  F  D  L  L  S  Y  H  Q  *  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15944" stop="15657"/>
                    <exon start="15579" stop="15484"/>
                    <exon start="14031" stop="13853"/>
                    <exon start="13600" stop="13519"/>
                    <exon start="12670" stop="12546"/>
                    <exon start="11563" stop="11471"/>
                    <exon start="10147" stop="9994"/>
                    <exon start="9601" stop="9560"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1056</number_coding_nucleotides>
                  <number_encoded_amino_acids>352</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQVRESIGVTLSVLCSNIRLQVSCNQAHPHEVGTSNVNRKVEAGNWDHYLVERASELVVKIQSFSQSDTLDVQTDMISDNGVLTEQSHDDVKWMETLFHFIISSLKSGRSSVLLDVVVGLLYPVISLQETSNKDLSTLAKIAFELLKWRVYSESHLRKVVLTILSIANDTNWRTRSTTLTYLRSFMYRHTFVLSKVDKQQIWQTVEKLLADNQVEVREHAAAVLAGLMKGGDEDLAQDFRHRAYTEASIIQKKRKQRSMRSGFSVASLHGKILALAACVLSVPYDIPSWLPEQVTLLAQFVSESSPVKSTVTKAVAEFRRTHADTWNVQKDSFTEEQLEVLADTSSSSSYFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="13620" e_stop="13519"/>
            <exon e_start="12670" e_stop="12546"/>
            <exon e_start="11563" e_stop="11471"/>
            <exon e_start="10147" e_stop="9994"/>
            <exon e_start="9601" e_stop="9286"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.713" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13620" e_stop="13519" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13518" i_stop="12671" i_length="848"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12670" e_stop="12546" e_length="125"/>
          </exon>
          <intron i_serial="2" don_prob="0.951" acc_prob="0.981">
            <gDNA_intron_boundary i_start="12545" i_stop="11564" i_length="982"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="11563" e_stop="11471" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.713">
            <gDNA_intron_boundary i_start="11470" i_stop="10148" i_length="1323"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10147" e_stop="9994" e_length="154"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="9993" i_stop="9602" i_length="392"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="9601" e_stop="9286" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13620" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="10026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13573" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13535" stop="13519"/>
              <exon start="12670" stop="12546"/>
              <exon start="11563" stop="11471"/>
              <exon start="10147" stop="9994"/>
              <exon start="9601" stop="9286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATCTTGTTGCACCATACAGGCACACTTTCGTCCTCTCTAAGGTGGACAAACAACAAATTTGGCAAACTGTCGAGAAGCTACTCGCAGATAATCAAGTTGAG : GTAAGGGAGCATGCGGCAGCAGTCTTGGCTGGCCTAATGAAGGGCGGAGATGAAGATTTAGCTCAGGATTTCCGTCATAGAGCTTATACAGAAGCAAGTATCATTCAGAAGAAGAGGAAACAAAG : AAGCATGCGTTCTGGATTCTCTGTAGCATCCCTACATGGAAAGATACTTGCTTTGGCTGCTTGCGTGCTATCAGTTCCTTATGATATTCCCAG : TTGGTTACCAGAACAGGTTACACTATTGGCTCAATTTGTTTCTGAATCATCACCTGTAAAATCTACCGTGACAAAAGCTGTGGCAGAGTTTCGACGCACTCATGCGGACACATGGAATGTTCAGAAAGATTCCTTCACTGAAGAACAACTTGAG : GTCCTGGCTGATACATCATCATCCTCATCATACTTTGCTTGACATTCATGGTGTGCCTTACATGAGAGATAGAATTATACCATATCATATATCTCATATATTGTAAGTGGGAAGTCTCCAAGTCTAAAGTTGAACTACAAAAATGCTCATACAATTTTTTATTAAAAATTTTGTTCTACACTAAAAATTAAAAGAAAAAACTTTTAGACAGAAAATCATTCATTTTCTACATTGAATTTGAACGTAGAAAATTGTGTTGTCATCTTCCCACAATTGTTATGTTTGATTTGCTTAGTTATCACCAGTAATTATTTCA</gDNA_template>
            <first_frame> Y  L  V  A  P  Y  R  H  T  F  V  L  S  K  V  D  K  Q  Q  I  W  Q  T  V  E  K  L  L  A  D  N  Q  V  E  :  V  R  E  H  A  A  A  V  L  A  G  L  M  K  G  G  D  E  D  L  A  Q  D  F  R  H  R  A  Y  T  E  A  S  I  I  Q  K  K  R  K  Q  R :   S  M  R  S  G  F  S  V  A  S  L  H  G  K  I  L  A  L  A  A  C  V  L  S  V  P  Y  D  I  P  S :   W  L  P  E  Q  V  T  L  L  A  Q  F  V  S  E  S  S  P  V  K  S  T  V  T  K  A  V  A  E  F  R  R  T  H  A  D  T  W  N  V  Q  K  D  S  F  T  E  E  Q  L  E  :  V  L  A  D  T  S  S  S  S  S  Y  F  A  *  H  S  W  C  A  L  H  E  R  *  N  Y  T  I  S  Y  I  S  Y  I  V  S  G  K  S  P  S  L  K  L  N  Y  K  N  A  H  T  I  F  Y  *  K  F  C  S  T  L  K  I  K  R  K  N  F  *  T  E  N  H  S  F  S  T  L  N  L  N  V  E  N  C  V  V  I  F  P  Q  L  L  C  L  I  C  L  V  I  T  S  N  Y  F  </first_frame>
            <second_frame>  I  L  L  H  H  T  G  T  L  S  S  S  L  R  W  T  N  N  K  F  G  K  L  S  R  S  Y  S  Q  I  I  K  L  R :   *  G  S  M  R  Q  Q  S  W  L  A  *  *  R  A  E  M  K  I  *  L  R  I  S  V  I  E  L  I  Q  K  Q  V  S  F  R  R  R  G  N  K   : E  A  C  V  L  D  S  L  *  H  P  Y  M  E  R  Y  L  L  W  L  L  A  C  Y  Q  F  L  M  I  F  P   : V  G  Y  Q  N  R  L  H  Y  W  L  N  L  F  L  N  H  H  L  *  N  L  P  *  Q  K  L  W  Q  S  F  D  A  L  M  R  T  H  G  M  F  R  K  I  P  S  L  K  N  N  L  R :   S  W  L  I  H  H  H  P  H  H  T  L  L  D  I  H  G  V  P  Y  M  R  D  R  I  I  P  Y  H  I  S  H  I  L  *  V  G  S  L  Q  V  *  S  *  T  T  K  M  L  I  Q  F  F  I  K  N  F  V  L  H  *  K  L  K  E  K  T  F  R  Q  K  I  I  H  F  L  H  *  I  *  T  *  K  I  V  L  S  S  S  H  N  C  Y  V  *  F  A  *  L  S  P  V  I  I  S </second_frame>
            <third_frame>   S  C  C  T  I  Q  A  H  F  R  P  L  *  G  G  Q  T  T  N  L  A  N  C  R  E  A  T  R  R  *  S  S  *   : G  K  G  A  C  G  S  S  L  G  W  P  N  E  G  R  R  *  R  F  S  S  G  F  P  S  *  S  L  Y  R  S  K  Y  H  S  E  E  E  E  T  K  :  K  H  A  F  W  I  L  C  S  I  P  T  W  K  D  T  C  F  G  C  L  R  A  I  S  S  L  *  Y  S  Q  :  L  V  T  R  T  G  Y  T  I  G  S  I  C  F  *  I  I  T  C  K  I  Y  R  D  K  S  C  G  R  V  S  T  H  S  C  G  H  M  E  C  S  E  R  F  L  H  *  R  T  T  *   : G  P  G  *  Y  I  I  I  L  I  I  L  C  L  T  F  M  V  C  L  T  *  E  I  E  L  Y  H  I  I  Y  L  I  Y  C  K  W  E  V  S  K  S  K  V  E  L  Q  K  C  S  Y  N  F  L  L  K  I  L  F  Y  T  K  N  *  K  K  K  L  L  D  R  K  S  F  I  F  Y  I  E  F  E  R  R  K  L  C  C  H  L  P  T  I  V  M  F  D  L  L  S  Y  H  Q  *  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13620" stop="13519"/>
                    <exon start="12670" stop="12546"/>
                    <exon start="11563" stop="11471"/>
                    <exon start="10147" stop="9994"/>
                    <exon start="9601" stop="9560"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLVAPYRHTFVLSKVDKQQIWQTVEKLLADNQVEVREHAAAVLAGLMKGGDEDLAQDFRHRAYTEASIIQKKRKQRSMRSGFSVASLHGKILALAACVLSVPYDIPSWLPEQVTLLAQFVSESSPVKSTVTKAVAEFRRTHADTWNVQKDSFTEEQLEVLADTSSSSSYFA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="20538" PGL_stop="19250"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20538" e_stop="20527"/>
            <exon e_start="20439" e_stop="20269"/>
            <exon e_start="19793" e_stop="19625"/>
            <exon e_start="19547" e_stop="19504"/>
            <exon e_start="19410" e_stop="19368"/>
            <exon e_start="19279" e_stop="19250"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.921" acc_prob="0.703" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.820" e_score="0.988"/>
          <exon-intron don_prob="0.753" acc_prob="0.000" e_score="0.994"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.583" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20538" e_stop="20527" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.921" acc_prob="0.703">
            <gDNA_intron_boundary i_start="20526" i_stop="20440" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="20439" e_stop="20269" e_length="171"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.820">
            <gDNA_intron_boundary i_start="20268" i_stop="19794" i_length="475"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="19793" e_stop="19625" e_length="169"/>
          </exon>
          <intron i_serial="3" don_prob="0.753" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19624" i_stop="19548" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19547" e_stop="19504" e_length="44"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19503" i_stop="19411" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19410" e_stop="19368" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.583">
            <gDNA_intron_boundary i_start="19367" i_stop="19280" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19279" e_stop="19250" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20538" stop="20527"/>
              <exon start="20439" stop="20269"/>
              <exon start="19793" stop="19625"/>
              <exon start="19547" stop="19504"/>
              <exon start="19410" stop="19368"/>
              <exon start="19279" stop="19250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248133" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGGAAAAAAAG : GCCTAGTTGGGCACTTATTGACAAAGCATGCATGCATAGTACTTGGAGAGCCTCACAATCATCATATCATATCTTCCGGCTGAGTGCAAATGTATCTCCTTCAGATCATATCATTCATTTGACGGATGATCTTCTTAATCTCTCCTTGCATAGTTATGAAACAGTCCGTGG : ACTTGCTGGAAAATCTCTCTTGAAGATGATGAAGAGATGGCCCTCTACAATCTCAAAATGTGTGCTCAGTCTGAGTCAGAACTTGAAAAATTCTAGCTCACCAGAATGCGCAGTCTTAGGTTCCTGTGCAGTCCTTGCAACGCAAACTGTTCTTAAATGTTTAACAACG : GATTTGAAGGCACTTTCTTCCTTCCTGCTTGGAATTCTGTCAAG : CTCTCATCATGAAACACTAAAAGCTCAGAAAGCCATCAATGAG : CTTTTCATTAAGTACAACATTCATTTTTCT</gDNA_template>
            <first_frame> R  E  K  K  :  A  *  L  G  T  Y  *  Q  S  M  H  A  *  Y  L  E  S  L  T  I  I  I  S  Y  L  P  A  E  C  K  C  I  S  F  R  S  Y  H  S  F  D  G  *  S  S  *  S  L  L  A  *  L  *  N  S  P  W  :  T  C  W  K  I  S  L  E  D  D  E  E  M  A  L  Y  N  L  K  M  C  A  Q  S  E  S  E  L  E  K  F  *  L  T  R  M  R  S  L  R  F  L  C  S  P  C  N  A  N  C  S  *  M  F  N  N   : G  F  E  G  T  F  F  L  P  A  W  N  S  V  K  :  L  S  S  *  N  T  K  S  S  E  S  H  Q  *   : A  F  H  *  V  Q  H  S  F  F  </first_frame>
            <second_frame>  G  K  K  R :   P  S  W  A  L  I  D  K  A  C  M  H  S  T  W  R  A  S  Q  S  S  Y  H  I  F  R  L  S  A  N  V  S  P  S  D  H  I  I  H  L  T  D  D  L  L  N  L  S  L  H  S  Y  E  T  V  R  G :   L  A  G  K  S  L  L  K  M  M  K  R  W  P  S  T  I  S  K  C  V  L  S  L  S  Q  N  L  K  N  S  S  S  P  E  C  A  V  L  G  S  C  A  V  L  A  T  Q  T  V  L  K  C  L  T  T  :  D  L  K  A  L  S  S  F  L  L  G  I  L  S  S :   S  H  H  E  T  L  K  A  Q  K  A  I  N  E  :  L  F  I  K  Y  N  I  H  F  S </second_frame>
            <third_frame>   G  K  K   : G  L  V  G  H  L  L  T  K  H  A  C  I  V  L  G  E  P  H  N  H  H  I  I  S  S  G  *  V  Q  M  Y  L  L  Q  I  I  S  F  I  *  R  M  I  F  L  I  S  P  C  I  V  M  K  Q  S  V   : D  L  L  E  N  L  S  *  R  *  *  R  D  G  P  L  Q  S  Q  N  V  C  S  V  *  V  R  T  *  K  I  L  A  H  Q  N  A  Q  S  *  V  P  V  Q  S  L  Q  R  K  L  F  L  N  V  *  Q  R :   I  *  R  H  F  L  P  S  C  L  E  F  C  Q   : A  L  I  M  K  H  *  K  L  R  K  P  S  M  S :   F  S  L  S  T  T  F  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20537" stop="20527"/>
                    <exon start="20439" stop="20269"/>
                    <exon start="19793" stop="19625"/>
                    <exon start="19547" stop="19504"/>
                    <exon start="19410" stop="19368"/>
                    <exon start="19279" stop="19250"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKKRPSWALIDKACMHSTWRASQSSYHIFRLSANVSPSDHIIHLTDDLLNLSLHSYETVRGLAGKSLLKMMKRWPSTISKCVLSLSQNLKNSSSPECAVLGSCAVLATQTVLKCLTTDLKALSSFLLGILSSSHHETLKAQKAINELFIKYNIHFS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="25756" PGL_stop="24289"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25756" e_stop="25748"/>
            <exon e_start="25557" e_stop="25456"/>
            <exon e_start="25369" e_stop="25204"/>
            <exon e_start="24983" e_stop="24867"/>
            <exon e_start="24784" e_stop="24717"/>
            <exon e_start="24627" e_stop="24526"/>
            <exon e_start="24440" e_stop="24289"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.758" acc_prob="0.647" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.967" e_score="0.990"/>
          <exon-intron don_prob="0.846" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.168" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="25756" e_stop="25748" e_length="9"/>
          </exon>
          <intron i_serial="1" don_prob="0.758" acc_prob="0.647">
            <gDNA_intron_boundary i_start="25747" i_stop="25558" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="25557" e_stop="25456" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.967">
            <gDNA_intron_boundary i_start="25455" i_stop="25370" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25369" e_stop="25204" e_length="166"/>
          </exon>
          <intron i_serial="3" don_prob="0.846" acc_prob="1.000">
            <gDNA_intron_boundary i_start="25203" i_stop="24984" i_length="220"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24983" e_stop="24867" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="0.168" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24866" i_stop="24785" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24784" e_stop="24717" e_length="68"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.994">
            <gDNA_intron_boundary i_start="24716" i_stop="24628" i_length="89"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="24627" e_stop="24526" e_length="102"/>
          </exon>
          <intron i_serial="6" don_prob="0.972" acc_prob="0.000">
            <gDNA_intron_boundary i_start="24525" i_stop="24441" i_length="85"/>
          </intron>
          <exon e_serial="7" e_score="0.987">
            <gDNA_exon_boundary e_start="24440" e_stop="24289" e_length="152"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25756" stop="25748"/>
              <exon start="25557" stop="25456"/>
              <exon start="25369" stop="25204"/>
              <exon start="24983" stop="24867"/>
              <exon start="24784" stop="24717"/>
              <exon start="24627" stop="24526"/>
              <exon start="24440" stop="24289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAGTTCAG : ATCTTTGCTTGAAAATCCATGGCACAATTCATCCTTTGAGGGTGCTGGTTTTGTAAGACTGTTCCTTCCTACCAATAGAGACAACCAGGATTTCTTTTCTCA : CACTTGGATTGTTACGTGTTTAGTCCACTGGGATTCCGTACCAAATTCCCAGTTTTGGAACAGCCAGTGGGCCTCCGTTACAGCTCGTGTTTTAAAGAACTATAGCTTCATTGACTGGGAACATTTCTTACCAGATATTTTCAATAAATATTTGAATATGTTCGAG : GTTCCAGTAGCAAATGGCAGTGGGTCAAACCCATTCTCTGTGGATGTTCCCAGAAACACAAGATTCTTGTTCTCAAATAGAACAATCACTCCATCAAAAGCCATTGCTAAATCTATA : GTTTATCTACTAAAACCTGGTGGTTCTGCACAAGAACATTTGGAGAAATTGGTCAACCTCTTGGAACA : GTATTACCATCCTTCTAATGGTGGTCGCTGGACTTATTCCTTGGAGCGATTCTTGTTCCACTTGGTAAATATATTTCAGAAACGCTTGCAAAATGAGCAACA : GAGAAAAGATGACGGCGAGCAGTCTGAAATCTTCCTAGGGCAGTCAGAGAGGGTTTCTTTTGTGCATTCTATTCTCAAGCTAATTGATCGTGGACAGTATAGCAAAAATGAACATCTTTCTGAAACCGTTGCAGCTGCCACTTCTATCCTTT</gDNA_template>
            <first_frame> R  V  Q  :  I  F  A  *  K  S  M  A  Q  F  I  L  *  G  C  W  F  C  K  T  V  P  S  Y  Q  *  R  Q  P  G  F  L  F  S  :  H  L  D  C  Y  V  F  S  P  L  G  F  R  T  K  F  P  V  L  E  Q  P  V  G  L  R  Y  S  S  C  F  K  E  L  *  L  H  *  L  G  T  F  L  T  R  Y  F  Q  *  I  F  E  Y  V  R   : G  S  S  S  K  W  Q  W  V  K  P  I  L  C  G  C  S  Q  K  H  K  I  L  V  L  K  *  N  N  H  S  I  K  S  H  C  *  I  Y   : S  L  S  T  K  T  W  W  F  C  T  R  T  F  G  E  I  G  Q  P  L  G  T  :  V  L  P  S  F  *  W  W  S  L  D  L  F  L  G  A  I  L  V  P  L  G  K  Y  I  S  E  T  L  A  K  *  A  T  :  E  K  R  *  R  R  A  V  *  N  L  P  R  A  V  R  E  G  F  F  C  A  F  Y  S  Q  A  N  *  S  W  T  V  *  Q  K  *  T  S  F  *  N  R  C  S  C  H  F  Y  P   </first_frame>
            <second_frame>  E  F  R :   S  L  L  E  N  P  W  H  N  S  S  F  E  G  A  G  F  V  R  L  F  L  P  T  N  R  D  N  Q  D  F  F  S  H :   T  W  I  V  T  C  L  V  H  W  D  S  V  P  N  S  Q  F  W  N  S  Q  W  A  S  V  T  A  R  V  L  K  N  Y  S  F  I  D  W  E  H  F  L  P  D  I  F  N  K  Y  L  N  M  F  E  :  V  P  V  A  N  G  S  G  S  N  P  F  S  V  D  V  P  R  N  T  R  F  L  F  S  N  R  T  I  T  P  S  K  A  I  A  K  S  I  :  V  Y  L  L  K  P  G  G  S  A  Q  E  H  L  E  K  L  V  N  L  L  E  Q :   Y  Y  H  P  S  N  G  G  R  W  T  Y  S  L  E  R  F  L  F  H  L  V  N  I  F  Q  K  R  L  Q  N  E  Q  Q :   R  K  D  D  G  E  Q  S  E  I  F  L  G  Q  S  E  R  V  S  F  V  H  S  I  L  K  L  I  D  R  G  Q  Y  S  K  N  E  H  L  S  E  T  V  A  A  A  T  S  I  L  </second_frame>
            <third_frame>   S  S   : D  L  C  L  K  I  H  G  T  I  H  P  L  R  V  L  V  L  *  D  C  S  F  L  P  I  E  T  T  R  I  S  F  L   : T  L  G  L  L  R  V  *  S  T  G  I  P  Y  Q  I  P  S  F  G  T  A  S  G  P  P  L  Q  L  V  F  *  R  T  I  A  S  L  T  G  N  I  S  Y  Q  I  F  S  I  N  I  *  I  C  S  R :   F  Q  *  Q  M  A  V  G  Q  T  H  S  L  W  M  F  P  E  T  Q  D  S  C  S  Q  I  E  Q  S  L  H  Q  K  P  L  L  N  L  * :   F  I  Y  *  N  L  V  V  L  H  K  N  I  W  R  N  W  S  T  S  W  N   : S  I  T  I  L  L  M  V  V  A  G  L  I  P  W  S  D  S  C  S  T  W  *  I  Y  F  R  N  A  C  K  M  S  N   : R  E  K  M  T  A  S  S  L  K  S  S  *  G  S  Q  R  G  F  L  L  C  I  L  F  S  S  *  L  I  V  D  S  I  A  K  M  N  I  F  L  K  P  L  Q  L  P  L  L  S  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25755" stop="25748"/>
                    <exon start="25557" stop="25456"/>
                    <exon start="25369" stop="25204"/>
                    <exon start="24983" stop="24867"/>
                    <exon start="24784" stop="24717"/>
                    <exon start="24627" stop="24526"/>
                    <exon start="24440" stop="24290"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFRSLLENPWHNSSFEGAGFVRLFLPTNRDNQDFFSHTWIVTCLVHWDSVPNSQFWNSQWASVTARVLKNYSFIDWEHFLPDIFNKYLNMFEVPVANGSGSNPFSVDVPRNTRFLFSNRTITPSKAIAKSIVYLLKPGGSAQEHLEKLVNLLEQYYHPSNGGRWTYSLERFLFHLVNIFQKRLQNEQQRKDDGEQSEIFLGQSERVSFVHSILKLIDRGQYSKNEHLSETVAAATSIL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="31879" PGL_stop="31446"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31879" e_stop="31446"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="31879" e_stop="31446" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31879" stop="31446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277905" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCAAGGTGGTCCTCAGAAACAGAGGTGAACAGAATCGTAAAAAACAGAGCATGAAATATAAAGAAAAAACAACAGATCTGAAATATTTCTCTCCTAATACTGTCCATTCGTGCCTCTTTGGCCGCAATTCTGCGGCCAGAGAGATCCTCTTCTCTCTGCCAAAGCTTGAGAAGCAACAGATGCCCTGGACTTTTTGAGATTTCCATCAATGGATGGTTTTGAATCGCAGTTATAGTAGTAATACCCGAAGAAAGTTTAAGCTGATGCTCTTCATCAACCGGAATTTCAACGATAACATGACAATCCTTTGATTCCGCCATTAATGAAAATTGAAATGAAAGAACAGCTAAACAAAAATACTAACAATAACAAAAGAAATTAGTGAGCTTTAGACGAAATTGCGGTTAACTTAAGAGTAGATTGTGATAGCTT</gDNA_template>
            <first_frame> H  Q  G  G  P  Q  K  Q  R  *  T  E  S  *  K  T  E  H  E  I  *  R  K  N  N  R  S  E  I  F  L  S  *  Y  C  P  F  V  P  L  W  P  Q  F  C  G  Q  R  D  P  L  L  S  A  K  A  *  E  A  T  D  A  L  D  F  L  R  F  P  S  M  D  G  F  E  S  Q  L  *  *  *  Y  P  K  K  V  *  A  D  A  L  H  Q  P  E  F  Q  R  *  H  D  N  P  L  I  P  P  L  M  K  I  E  M  K  E  Q  L  N  K  N  T  N  N  N  K  R  N  *  *  A  L  D  E  I  A  V  N  L  R  V  D  C  D  S   </first_frame>
            <second_frame>  I  K  V  V  L  R  N  R  G  E  Q  N  R  K  K  Q  S  M  K  Y  K  E  K  T  T  D  L  K  Y  F  S  P  N  T  V  H  S  C  L  F  G  R  N  S  A  A  R  E  I  L  F  S  L  P  K  L  E  K  Q  Q  M  P  W  T  F  *  D  F  H  Q  W  M  V  L  N  R  S  Y  S  S  N  T  R  R  K  F  K  L  M  L  F  I  N  R  N  F  N  D  N  M  T  I  L  *  F  R  H  *  *  K  L  K  *  K  N  S  *  T  K  I  L  T  I  T  K  E  I  S  E  L  *  T  K  L  R  L  T  *  E  *  I  V  I  A  </second_frame>
            <third_frame>   S  R  W  S  S  E  T  E  V  N  R  I  V  K  N  R  A  *  N  I  K  K  K  Q  Q  I  *  N  I  S  L  L  I  L  S  I  R  A  S  L  A  A  I  L  R  P  E  R  S  S  S  L  C  Q  S  L  R  S  N  R  C  P  G  L  F  E  I  S  I  N  G  W  F  *  I  A  V  I  V  V  I  P  E  E  S  L  S  *  C  S  S  S  T  G  I  S  T  I  T  *  Q  S  F  D  S  A  I  N  E  N  *  N  E  R  T  A  K  Q  K  Y  *  Q  *  Q  K  K  L  V  S  F  R  R  N  C  G  *  L  K  S  R  L  *  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31878" stop="31681"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKVVLRNRGEQNRKKQSMKYKEKTTDLKYFSPNTVHSCLFGRNSAAREILFSLPKLEKQQMPWTF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="31458" PGL_stop="33022"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31458" e_stop="32356"/>
            <exon e_start="32449" e_stop="33022"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.994" e_score="0.987"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="31458" e_stop="32356" e_length="899"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.994">
            <gDNA_intron_boundary i_start="32357" i_stop="32448" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="32449" e_stop="33022" e_length="574"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31458" stop="31987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31463" stop="32058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31481" stop="31918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31500" stop="31987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31522" stop="32044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31772" stop="32315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267413" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31986" stop="32356"/>
              <exon start="32449" stop="32986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32103" stop="32356"/>
              <exon start="32449" stop="32892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318192" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32286" stop="32356"/>
              <exon start="32449" stop="33015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32286" stop="32356"/>
              <exon start="32449" stop="32766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280030" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32674" stop="33022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225929" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTACTCTTAAGTTAACCGCAATTTCGTCTAAAGCTCACTAATTTCTTTTGTTATTGTTAGTATTTTTGTTTAGCTGTTCTTTCATTTCAATTTTCATTAATGGCGGAATCAAAGGATTGTCATGTTATCGTTGAAATTCCGGTTGATGAAGAGCATCAGCTTAAACTTTCTTCGGGTATTACTACTATAACTGCGATTCAAAACCATCCATTGATGGAAATCTCAAAAAGTCCAGGGCATCTGTTGCTTCTCAAGCTTTGGCAGAGAGAAGAGGATCTCTCTGGCCGCAGAATTGCGGCCAAAGAGGCACGAATGGACAGTATTAGGAGAGAAATATTTCAGATCTGTTGTTTTTTCTTTATATTTCATGCTCTGTTTTTTACGATTCTGTTCACCTCTGTTTCTGAGGACCACCTTGATGGTAAGGTTATGTGTCAAAAATGGTGGATTCCTTCGATTCTATCAGTTTGTACTTCGTTTTGTATTGTGTTTTTGGTGCAGGTGAAACTTTACAGGTTTTGGAAGGTATCGAGGCAGTTGCAGAGGGAGAAGGGGGATGGTAGAGCACTGACAAGGTGCATTTCGGAGTTGAGGATGAAAGGAGCGAGTTTTGATCTGTCGAAAGAGCCACAGATTGGGAAGAAGATGAAGAGCTCTAGTGTGGAGATCAAATGGAAGCCATTAACTTGGTTATCTCAGTATGCTGTAACTATCTGTCTCATTTGTTTTACAGGATTGCTCTTCCCTGCTTCCAGGCTCGTCCTTTGCGCTTGATGTACTTCGTCTTCAATCTCTCTTCTTACACAAATCAGCAAATTTGGAATCTGGAAAGAGTTGTTCTTTGCTTCAAAGAACTTGCAGACATCCAAGTCGAGGCATTCGTACATGAATGAAAATG : GGAATATACAGTCTCAAACCTGATGTTTCCCACATAGAGCCGTCTGGCCGGAAAAAGAACCCAAAGGCAACAGGAGAAGAGTTGTCCACCAGCAGAGAAAAATGGACAGTCCAGTGCACAGAACATTCAATATTCAGGCAGGGATCTGGAAAAGGAACACACACACCCCAAGGGACGGGCACCACAGCTCAAGCATCACATGAAAACTCTACCATTGCTCCAAGCTCCTTTCAGGGTGCTAGCCAATGATGCCTACACACAATTTCTTTACACCTCCATCTCAATCATGCTGCAATGACATCAATATTGGAAACTTGCTCACCATTGCGGTGTCTCGACTCAGCTATCAGGCTCACTGCTCTGCCCACTGCATGAGCGGAAGAGCAGAGATCTAGAGTTTTAACAGCCAGCACTTTTGAAGTTTGCAGATTTGGGAAACACTGCCCATGTTCTAACGTCTCTTTCAGCATTTTTCAAAAATGACATGTAATAAATGTTACAAAATCAATGTAAACAAGTTGTTCATCTGAAAATTTTGCTTTCTTCATCATAAATTATACAAGATCTTTTTCAG</gDNA_template>
            <first_frame> S  T  L  K  L  T  A  I  S  S  K  A  H  *  F  L  L  L  L  L  V  F  L  F  S  C  S  F  I  S  I  F  I  N  G  G  I  K  G  L  S  C  Y  R  *  N  S  G  *  *  R  A  S  A  *  T  F  F  G  Y  Y  Y  Y  N  C  D  S  K  P  S  I  D  G  N  L  K  K  S  R  A  S  V  A  S  Q  A  L  A  E  R  R  G  S  L  W  P  Q  N  C  G  Q  R  G  T  N  G  Q  Y  *  E  R  N  I  S  D  L  L  F  F  L  Y  I  S  C  S  V  F  Y  D  S  V  H  L  C  F  *  G  P  P  *  W  *  G  Y  V  S  K  M  V  D  S  F  D  S  I  S  L  Y  F  V  L  Y  C  V  F  G  A  G  E  T  L  Q  V  L  E  G  I  E  A  V  A  E  G  E  G  G  W  *  S  T  D  K  V  H  F  G  V  E  D  E  R  S  E  F  *  S  V  E  R  A  T  D  W  E  E  D  E  E  L  *  C  G  D  Q  M  E  A  I  N  L  V  I  S  V  C  C  N  Y  L  S  H  L  F  Y  R  I  A  L  P  C  F  Q  A  R  P  L  R  L  M  Y  F  V  F  N  L  S  S  Y  T  N  Q  Q  I  W  N  L  E  R  V  V  L  C  F  K  E  L  A  D  I  Q  V  E  A  F  V  H  E  *  K  W :   E  Y  T  V  S  N  L  M  F  P  T  *  S  R  L  A  G  K  R  T  Q  R  Q  Q  E  K  S  C  P  P  A  E  K  N  G  Q  S  S  A  Q  N  I  Q  Y  S  G  R  D  L  E  K  E  H  T  H  P  K  G  R  A  P  Q  L  K  H  H  M  K  T  L  P  L  L  Q  A  P  F  R  V  L  A  N  D  A  Y  T  Q  F  L  Y  T  S  I  S  I  M  L  Q  *  H  Q  Y  W  K  L  A  H  H  C  G  V  S  T  Q  L  S  G  S  L  L  C  P  L  H  E  R  K  S  R  D  L  E  F  *  Q  P  A  L  L  K  F  A  D  L  G  N  T  A  H  V  L  T  S  L  S  A  F  F  K  N  D  M  *  *  M  L  Q  N  Q  C  K  Q  V  V  H  L  K  I  L  L  S  S  S  *  I  I  Q  D  L  F  Q </first_frame>
            <second_frame>  L  L  L  S  *  P  Q  F  R  L  K  L  T  N  F  F  C  Y  C  *  Y  F  C  L  A  V  L  S  F  Q  F  S  L  M  A  E  S  K  D  C  H  V  I  V  E  I  P  V  D  E  E  H  Q  L  K  L  S  S  G  I  T  T  I  T  A  I  Q  N  H  P  L  M  E  I  S  K  S  P  G  H  L  L  L  L  K  L  W  Q  R  E  E  D  L  S  G  R  R  I  A  A  K  E  A  R  M  D  S  I  R  R  E  I  F  Q  I  C  C  F  F  F  I  F  H  A  L  F  F  T  I  L  F  T  S  V  S  E  D  H  L  D  G  K  V  M  C  Q  K  W  W  I  P  S  I  L  S  V  C  T  S  F  C  I  V  F  L  V  Q  V  K  L  Y  R  F  W  K  V  S  R  Q  L  Q  R  E  K  G  D  G  R  A  L  T  R  C  I  S  E  L  R  M  K  G  A  S  F  D  L  S  K  E  P  Q  I  G  K  K  M  K  S  S  S  V  E  I  K  W  K  P  L  T  W  L  S  Q  Y  A  V  T  I  C  L  I  C  F  T  G  L  L  F  P  A  S  R  L  V  L  C  A  *  C  T  S  S  S  I  S  L  L  T  Q  I  S  K  F  G  I  W  K  E  L  F  F  A  S  K  N  L  Q  T  S  K  S  R  H  S  Y  M  N  E  N   : G  N  I  Q  S  Q  T  *  C  F  P  H  R  A  V  W  P  E  K  E  P  K  G  N  R  R  R  V  V  H  Q  Q  R  K  M  D  S  P  V  H  R  T  F  N  I  Q  A  G  I  W  K  R  N  T  H  T  P  R  D  G  H  H  S  S  S  I  T  *  K  L  Y  H  C  S  K  L  L  S  G  C  *  P  M  M  P  T  H  N  F  F  T  P  P  S  Q  S  C  C  N  D  I  N  I  G  N  L  L  T  I  A  V  S  R  L  S  Y  Q  A  H  C  S  A  H  C  M  S  G  R  A  E  I  *  S  F  N  S  Q  H  F  *  S  L  Q  I  W  E  T  L  P  M  F  *  R  L  F  Q  H  F  S  K  M  T  C  N  K  C  Y  K  I  N  V  N  K  L  F  I  *  K  F  C  F  L  H  H  K  L  Y  K  I  F  F   </second_frame>
            <third_frame>   Y  S  *  V  N  R  N  F  V  *  S  S  L  I  S  F  V  I  V  S  I  F  V  *  L  F  F  H  F  N  F  H  *  W  R  N  Q  R  I  V  M  L  S  L  K  F  R  L  M  K  S  I  S  L  N  F  L  R  V  L  L  L  *  L  R  F  K  T  I  H  *  W  K  S  Q  K  V  Q  G  I  C  C  F  S  S  F  G  R  E  K  R  I  S  L  A  A  E  L  R  P  K  R  H  E  W  T  V  L  G  E  K  Y  F  R  S  V  V  F  S  L  Y  F  M  L  C  F  L  R  F  C  S  P  L  F  L  R  T  T  L  M  V  R  L  C  V  K  N  G  G  F  L  R  F  Y  Q  F  V  L  R  F  V  L  C  F  W  C  R  *  N  F  T  G  F  G  R  Y  R  G  S  C  R  G  R  R  G  M  V  E  H  *  Q  G  A  F  R  S  *  G  *  K  E  R  V  L  I  C  R  K  S  H  R  L  G  R  R  *  R  A  L  V  W  R  S  N  G  S  H  *  L  G  Y  L  S  M  L  *  L  S  V  S  F  V  L  Q  D  C  S  S  L  L  P  G  S  S  F  A  L  D  V  L  R  L  Q  S  L  F  L  H  K  S  A  N  L  E  S  G  K  S  C  S  L  L  Q  R  T  C  R  H  P  S  R  G  I  R  T  *  M  K  M  :  G  I  Y  S  L  K  P  D  V  S  H  I  E  P  S  G  R  K  K  N  P  K  A  T  G  E  E  L  S  T  S  R  E  K  W  T  V  Q  C  T  E  H  S  I  F  R  Q  G  S  G  K  G  T  H  T  P  Q  G  T  G  T  T  A  Q  A  S  H  E  N  S  T  I  A  P  S  S  F  Q  G  A  S  Q  *  C  L  H  T  I  S  L  H  L  H  L  N  H  A  A  M  T  S  I  L  E  T  C  S  P  L  R  C  L  D  S  A  I  R  L  T  A  L  P  T  A  *  A  E  E  Q  R  S  R  V  L  T  A  S  T  F  E  V  C  R  F  G  K  H  C  P  C  S  N  V  S  F  S  I  F  Q  K  *  H  V  I  N  V  T  K  S  M  *  T  S  C  S  S  E  N  F  A  F  F  I  I  N  Y  T  R  S  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31519" stop="32232"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>711</number_coding_nucleotides>
                  <number_encoded_amino_acids>237</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFCLAVLSFQFSLMAESKDCHVIVEIPVDEEHQLKLSSGITTITAIQNHPLMEISKSPGHLLLLKLWQREEDLSGRRIAAKEARMDSIRREIFQICCFFFIFHALFFTILFTSVSEDHLDGKVMCQKWWIPSILSVCTSFCIVFLVQVKLYRFWKVSRQLQREKGDGRALTRCISELRMKGASFDLSKEPQIGKKMKSSSVEIKWKPLTWLSQYAVTICLICFTGLLFPASRLVLCA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32486" stop="32746"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRLAGKRTQRQQEKSCPPAEKNGQSSAQNIQYSGRDLEKEHTHPKGRAPQLKHHMKTLPLLQAPFRVLANDAYTQFLYTSISIMLQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="38552" PGL_stop="32897"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38552" e_stop="38477"/>
            <exon e_start="38335" e_stop="38240"/>
            <exon e_start="36085" e_stop="35956"/>
            <exon e_start="35381" e_stop="35290"/>
            <exon e_start="35018" e_stop="34950"/>
            <exon e_start="34259" e_stop="34202"/>
            <exon e_start="34095" e_stop="33996"/>
            <exon e_start="33680" e_stop="33594"/>
            <exon e_start="33499" e_stop="33421"/>
            <exon e_start="33286" e_stop="33154"/>
            <exon e_start="33085" e_stop="32902"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.966" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.137" acc_prob="0.822" e_score="1.000"/>
          <exon-intron don_prob="0.921" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.826" e_score="1.000"/>
          <exon-intron don_prob="0.503" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.821"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38552" e_stop="38477" e_length="76"/>
          </exon>
          <intron i_serial="1" don_prob="0.966" acc_prob="0.994">
            <gDNA_intron_boundary i_start="38476" i_stop="38336" i_length="141"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38335" e_stop="38240" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.945">
            <gDNA_intron_boundary i_start="38239" i_stop="36086" i_length="2154"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="36085" e_stop="35956" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.918" acc_prob="0.995">
            <gDNA_intron_boundary i_start="35955" i_stop="35382" i_length="574"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="35381" e_stop="35290" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="35289" i_stop="35019" i_length="271"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="35018" e_stop="34950" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.137" acc_prob="0.822">
            <gDNA_intron_boundary i_start="34949" i_stop="34260" i_length="690"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="34259" e_stop="34202" e_length="58"/>
          </exon>
          <intron i_serial="6" don_prob="0.921" acc_prob="0.974">
            <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="34095" e_stop="33996" e_length="100"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="33680" e_stop="33594" e_length="87"/>
          </exon>
          <intron i_serial="8" don_prob="0.961" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="33499" e_stop="33421" e_length="79"/>
          </exon>
          <intron i_serial="9" don_prob="0.979" acc_prob="0.826">
            <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="33286" e_stop="33154" e_length="133"/>
          </exon>
          <intron i_serial="10" don_prob="0.503" acc_prob="0.981">
            <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68"/>
          </intron>
          <exon e_serial="11" e_score="0.821">
            <gDNA_exon_boundary e_start="33085" e_stop="32902" e_length="184"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38552" stop="38477"/>
              <exon start="38335" stop="38240"/>
              <exon start="36085" stop="35956"/>
              <exon start="35381" stop="35290"/>
              <exon start="35018" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="34091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38544" stop="38477"/>
              <exon start="38335" stop="38240"/>
              <exon start="36085" stop="35956"/>
              <exon start="35381" stop="35290"/>
              <exon start="35018" stop="34986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38543" stop="38477"/>
              <exon start="38335" stop="38240"/>
              <exon start="36085" stop="35956"/>
              <exon start="35381" stop="35290"/>
              <exon start="35018" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="34091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306975" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38536" stop="38477"/>
              <exon start="38335" stop="38240"/>
              <exon start="36085" stop="35956"/>
              <exon start="35381" stop="35290"/>
              <exon start="35018" stop="34982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38300" stop="38240"/>
              <exon start="36085" stop="35956"/>
              <exon start="35381" stop="35290"/>
              <exon start="35018" stop="34950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35981" stop="35956"/>
              <exon start="35381" stop="35290"/>
              <exon start="35018" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="33996"/>
              <exon start="33680" stop="33594"/>
              <exon start="33499" stop="33421"/>
              <exon start="33286" stop="33154"/>
              <exon start="33085" stop="32978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35367" stop="35290"/>
              <exon start="35018" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="33996"/>
              <exon start="33680" stop="33594"/>
              <exon start="33499" stop="33421"/>
              <exon start="33286" stop="33154"/>
              <exon start="33085" stop="33062"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35367" stop="35290"/>
              <exon start="35018" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="33996"/>
              <exon start="33680" stop="33594"/>
              <exon start="33499" stop="33421"/>
              <exon start="33286" stop="33196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35348" stop="35290"/>
              <exon start="35018" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="33996"/>
              <exon start="33680" stop="33594"/>
              <exon start="33499" stop="33421"/>
              <exon start="33286" stop="33154"/>
              <exon start="33085" stop="32902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34978" stop="34950"/>
              <exon start="34259" stop="34202"/>
              <exon start="34095" stop="33996"/>
              <exon start="33680" stop="33594"/>
              <exon start="33499" stop="33421"/>
              <exon start="33286" stop="33154"/>
              <exon start="33085" stop="32980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCAGAAGAGTAATGGCGGAAACAATACCCTTCAAAAATCTTCATAGCAGAGAGTACCAGGGACACAAGAAGAAG : GTGCATTCGGTGGCATGGAACTGCAGTGGCACGAAATTAGCTTCAGGTTCTGTGGATCAAACAGCTCGTATTTGGCAAATTGAGCCTCATGGTCAT : GGAAAGGTAAAAGATGTTGAATTAAAGGGTCACACCGACAGTGTGGACCAGTTATGTTGGGATCCAAAACATGCAGAATTGATAGCTACAGCATCTGGTGACAAGACAGTTCGATTATGGGATGCCCGTA : GTGGGAAATGCTCACAGCAAGTTGAACTCAGTGGGGAAAATATCAATATCACTTACAAGCCTGATGGGACACATATAGCTGTTGGGAACAGG : GATGATGAGCTAACAATCTTGGATGTTCGCAAGTTTAAGCCTATTCATAAGCGCAAGTTTAATTATGAG : GTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATG : GAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG : ATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA : GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT : GCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAG : GTGTGTTTCGCATATTTGGCTTTGAGAGCGCATAGAGCCCTGATGAAAGGTTATAAAAGAGGCCTGAAAAAGATCTTGTATAATTTATGATGAAGAAAGCAAAATTTTCAGATGAACAACTTGTTTACATTGATTTTGTAACATTTATTACATGTCATTTTTGAAAAATGCTGAAAGAGACGTT</gDNA_template>
            <first_frame> K  Q  K  S  N  G  G  N  N  T  L  Q  K  S  S  *  Q  R  V  P  G  T  Q  E  E   : G  A  F  G  G  M  E  L  Q  W  H  E  I  S  F  R  F  C  G  S  N  S  S  Y  L  A  N  *  A  S  W  S   : W  K  G  K  R  C  *  I  K  G  S  H  R  Q  C  G  P  V  M  L  G  S  K  T  C  R  I  D  S  Y  S  I  W  *  Q  D  S  S  I  M  G  C  P  * :   W  E  M  L  T  A  S  *  T  Q  W  G  K  Y  Q  Y  H  L  Q  A  *  W  D  T  Y  S  C  W  E  Q   : G  *  *  A  N  N  L  G  C  S  Q  V  *  A  Y  S  *  A  Q  V  *  L  *   : G  K  *  D  C  M  E  H  G  W  R  Y  V  L  S  Y  N  W  K  W :   N  C  G  S  L  S  L  S  V  S  T  S  C  *  H  A  *  C  S  H  C  W  L  L  L  H  C  N  *  S  T  R  K  :  I  F  C  C  W  K  C  *  F  I  G  Q  P  L  E  H  Q  G  D  A  M  S  S  N  I  Y  K  T  *  :  V  A  S  S  D  N  K  F  Q  S  H  R  R  L  H  C  L  C  *  *  R  F  V  Y  *  Y   : C  *  C  P  I  W  T  V  S  S  P  N  S  M  S  C  C  H  E  Q  C  *  M  E  S  K  T  Q  L  A  C  L  C  R  G  *  *  E  Q  I  P  G  *  *  R :   C  V  S  H  I  W  L  *  E  R  I  E  P  *  *  K  V  I  K  E  A  *  K  R  S  C  I  I  Y  D  E  E  S  K  I  F  R  *  T  T  C  L  H  *  F  C  N  I  Y  Y  M  S  F  L  K  N  A  E  R  D  V </first_frame>
            <second_frame>  S  R  R  V  M  A  E  T  I  P  F  K  N  L  H  S  R  E  Y  Q  G  H  K  K  K  :  V  H  S  V  A  W  N  C  S  G  T  K  L  A  S  G  S  V  D  Q  T  A  R  I  W  Q  I  E  P  H  G  H  :  G  K  V  K  D  V  E  L  K  G  H  T  D  S  V  D  Q  L  C  W  D  P  K  H  A  E  L  I  A  T  A  S  G  D  K  T  V  R  L  W  D  A  R   : S  G  K  C  S  Q  Q  V  E  L  S  G  E  N  I  N  I  T  Y  K  P  D  G  T  H  I  A  V  G  N  R  :  D  D  E  L  T  I  L  D  V  R  K  F  K  P  I  H  K  R  K  F  N  Y  E  :  V  N  E  I  A  W  N  T  G  G  D  M  F  F  L  T  T  G  N   : G  T  V  E  V  L  A  Y  P  S  L  Q  A  V  N  T  L  N  A  H  T  A  G  C  Y  C  I  A  I  D  P  L  G  R :   Y  F  A  V  G  S  A  D  S  L  V  S  L  W  S  I  K  E  M  L  C  L  R  T  F  T  K  L  E :   W  P  V  R  T  I  S  F  N  H  T  G  D  Y  I  A  S  A  S  E  D  L  F  I  D  I  :  A  N  V  Q  S  G  R  S  V  H  Q  I  P  C  R  A  A  M  N  S  V  E  W  N  P  K  H  N  L  L  A  F  A  G  D  D  K  N  K  Y  Q  A  D  E   : G  V  F  R  I  F  G  F  E  S  A  *  S  P  D  E  R  L  *  K  R  P  E  K  D  L  V  *  F  M  M  K  K  A  K  F  S  D  E  Q  L  V  Y  I  D  F  V  T  F  I  T  C  H  F  *  K  M  L  K  E  T   </second_frame>
            <third_frame>   A  E  E  *  W  R  K  Q  Y  P  S  K  I  F  I  A  E  S  T  R  D  T  R  R  R :   C  I  R  W  H  G  T  A  V  A  R  N  *  L  Q  V  L  W  I  K  Q  L  V  F  G  K  L  S  L  M  V  M :   E  R  *  K  M  L  N  *  R  V  T  P  T  V  W  T  S  Y  V  G  I  Q  N  M  Q  N  *  *  L  Q  H  L  V  T  R  Q  F  D  Y  G  M  P  V  :  V  G  N  A  H  S  K  L  N  S  V  G  K  I  S  I  S  L  T  S  L  M  G  H  I  *  L  L  G  T  G :   M  M  S  *  Q  S  W  M  F  A  S  L  S  L  F  I  S  A  S  L  I  M  R :   *  M  R  L  H  G  T  R  V  A  I  C  S  F  L  Q  L  E  M  :  E  L  W  K  S  *  L  I  R  L  Y  K  L  L  T  R  L  M  L  T  L  L  V  V  T  A  L  Q  L  I  H  *  E   : D  I  L  L  L  E  V  L  I  H  W  S  A  F  G  A  S  R  R  C  Y  V  F  E  H  L  Q  N  L   : S  G  Q  F  G  Q  *  V  S  I  T  Q  E  T  T  L  P  L  L  V  K  I  C  L  L  I  L :   L  M  S  N  L  D  G  Q  F  T  K  F  H  V  V  L  P  *  T  V  L  N  G  I  Q  N  T  T  C  L  P  L  P  G  M  I  R  T  N  T  R  L  M  K  :  V  C  F  A  Y  L  A  L  R  A  H  R  A  L  M  K  G  Y  K  R  G  L  K  K  I  L  Y  N  L  *  *  R  K  Q  N  F  Q  M  N  N  L  F  T  L  I  L  *  H  L  L  H  V  I  F  E  K  C  *  K  R  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38551" stop="38477"/>
                    <exon start="38335" stop="38240"/>
                    <exon start="36085" stop="35956"/>
                    <exon start="35381" stop="35290"/>
                    <exon start="35018" stop="34950"/>
                    <exon start="34259" stop="34202"/>
                    <exon start="34095" stop="33996"/>
                    <exon start="33680" stop="33594"/>
                    <exon start="33499" stop="33421"/>
                    <exon start="33286" stop="33154"/>
                    <exon start="33085" stop="33051"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>951</number_coding_nucleotides>
                  <number_encoded_amino_acids>317</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRRVMAETIPFKNLHSREYQGHKKKVHSVAWNCSGTKLASGSVDQTARIWQIEPHGHGKVKDVELKGHTDSVDQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNTGGDMFFLTTGNGTVEVLAYPSLQAVNTLNAHTAGCYCIAIDPLGRYFAVGSADSLVSLWSIKEMLCLRTFTKLEWPVRTISFNHTGDYIASASEDLFIDIANVQSGRSVHQIPCRAAMNSVEWNPKHNLLAFAGDDKNKYQADEGVFRIFGFESA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="34264" e_stop="34202"/>
            <exon e_start="34095" e_stop="33996"/>
            <exon e_start="33680" e_stop="33594"/>
            <exon e_start="33499" e_stop="33421"/>
            <exon e_start="33286" e_stop="33154"/>
            <exon e_start="33085" e_stop="32897"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.921" acc_prob="0.974" e_score="0.952"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="0.990"/>
          <exon-intron don_prob="0.961" acc_prob="0.995" e_score="0.977"/>
          <exon-intron don_prob="0.979" acc_prob="0.826" e_score="1.000"/>
          <exon-intron don_prob="0.503" acc_prob="0.981" e_score="0.955"/>
          <exon-only e_score="0.799"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="34264" e_stop="34202" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.921" acc_prob="0.974">
            <gDNA_intron_boundary i_start="34201" i_stop="34096" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="34095" e_stop="33996" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="33995" i_stop="33681" i_length="315"/>
          </intron>
          <exon e_serial="3" e_score="0.977">
            <gDNA_exon_boundary e_start="33680" e_stop="33594" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33593" i_stop="33500" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33499" e_stop="33421" e_length="79"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.826">
            <gDNA_intron_boundary i_start="33420" i_stop="33287" i_length="134"/>
          </intron>
          <exon e_serial="5" e_score="0.955">
            <gDNA_exon_boundary e_start="33286" e_stop="33154" e_length="133"/>
          </exon>
          <intron i_serial="5" don_prob="0.503" acc_prob="0.981">
            <gDNA_intron_boundary i_start="33153" i_stop="33086" i_length="68"/>
          </intron>
          <exon e_serial="6" e_score="0.799">
            <gDNA_exon_boundary e_start="33085" e_stop="32897" e_length="189"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34264" stop="34202"/>
              <exon start="34095" stop="33996"/>
              <exon start="33680" stop="33594"/>
              <exon start="33499" stop="33421"/>
              <exon start="33286" stop="33154"/>
              <exon start="33085" stop="32897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479051" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCAGGTAAATGAGATTGCATGGAACACGGGTGGCGATATGTTCTTTCTTACAACTGGAAATG : GAACTGTGGAAGTCTTAGCTTATCCGTCTCTACAAGCTGTTAACACGCTTAATGCTCACACTGCTGGTTGTTACTGCATTGCAATTGATCCACTAGGAAG : ATATTTTGCTGTTGGAAGTGCTGATTCATTGGTCAGCCTTTGGAGCATCAAGGAGATGCTATGTCTTCGAACATTTACAAAACTTGA : GTGGCCAGTTCGGACAATAAGTTTCAATCACACAGGAGACTACATTGCCTCTGCTAGTGAAGATTTGTTTATTGATATT : GCTAATGTCCAATCTGGACGGTCAGTTCACCAAATTCCATGTCGTGCTGCCATGAACAGTGTTGAATGGAATCCAAAACACAACTTGCTTGCCTTTGCCGGGGATGATAAGAACAAATACCAGGCTGATGAAG : GTGTGTTTCGCATATTTGGCTTTGAGAGCGCATAGAGCCCTGATGAAAGGTTATAAAAGAGGCCTGAAAAAGATCTTGTATAATTTATGATGAAGAAAGCAAAATTTTCAGATGAACAACTTGTTTACATTGATTTTGTAACATTTATTACATGTCATTTTTGAAAAATGCTGAAAGAGACGTTAGAAC</gDNA_template>
            <first_frame> I  R  *  M  R  L  H  G  T  R  V  A  I  C  S  F  L  Q  L  E  M  :  E  L  W  K  S  *  L  I  R  L  Y  K  L  L  T  R  L  M  L  T  L  L  V  V  T  A  L  Q  L  I  H  *  E   : D  I  L  L  L  E  V  L  I  H  W  S  A  F  G  A  S  R  R  C  Y  V  F  E  H  L  Q  N  L   : S  G  Q  F  G  Q  *  V  S  I  T  Q  E  T  T  L  P  L  L  V  K  I  C  L  L  I  L :   L  M  S  N  L  D  G  Q  F  T  K  F  H  V  V  L  P  *  T  V  L  N  G  I  Q  N  T  T  C  L  P  L  P  G  M  I  R  T  N  T  R  L  M  K  :  V  C  F  A  Y  L  A  L  R  A  H  R  A  L  M  K  G  Y  K  R  G  L  K  K  I  L  Y  N  L  *  *  R  K  Q  N  F  Q  M  N  N  L  F  T  L  I  L  *  H  L  L  H  V  I  F  E  K  C  *  K  R  R  *  N </first_frame>
            <second_frame>  S  G  K  *  D  C  M  E  H  G  W  R  Y  V  L  S  Y  N  W  K  W :   N  C  G  S  L  S  L  S  V  S  T  S  C  *  H  A  *  C  S  H  C  W  L  L  L  H  C  N  *  S  T  R  K  :  I  F  C  C  W  K  C  *  F  I  G  Q  P  L  E  H  Q  G  D  A  M  S  S  N  I  Y  K  T  *  :  V  A  S  S  D  N  K  F  Q  S  H  R  R  L  H  C  L  C  *  *  R  F  V  Y  *  Y   : C  *  C  P  I  W  T  V  S  S  P  N  S  M  S  C  C  H  E  Q  C  *  M  E  S  K  T  Q  L  A  C  L  C  R  G  *  *  E  Q  I  P  G  *  *  R :   C  V  S  H  I  W  L  *  E  R  I  E  P  *  *  K  V  I  K  E  A  *  K  R  S  C  I  I  Y  D  E  E  S  K  I  F  R  *  T  T  C  L  H  *  F  C  N  I  Y  Y  M  S  F  L  K  N  A  E  R  D  V  R   </second_frame>
            <third_frame>   Q  V  N  E  I  A  W  N  T  G  G  D  M  F  F  L  T  T  G  N   : G  T  V  E  V  L  A  Y  P  S  L  Q  A  V  N  T  L  N  A  H  T  A  G  C  Y  C  I  A  I  D  P  L  G  R :   Y  F  A  V  G  S  A  D  S  L  V  S  L  W  S  I  K  E  M  L  C  L  R  T  F  T  K  L  E :   W  P  V  R  T  I  S  F  N  H  T  G  D  Y  I  A  S  A  S  E  D  L  F  I  D  I  :  A  N  V  Q  S  G  R  S  V  H  Q  I  P  C  R  A  A  M  N  S  V  E  W  N  P  K  H  N  L  L  A  F  A  G  D  D  K  N  K  Y  Q  A  D  E   : G  V  F  R  I  F  G  F  E  S  A  *  S  P  D  E  R  L  *  K  R  P  E  K  D  L  V  *  F  M  M  K  K  A  K  F  S  D  E  Q  L  V  Y  I  D  F  V  T  F  I  T  C  H  F  *  K  M  L  K  E  T  L  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34262" stop="34202"/>
                    <exon start="34095" stop="33996"/>
                    <exon start="33680" stop="33594"/>
                    <exon start="33499" stop="33421"/>
                    <exon start="33286" stop="33154"/>
                    <exon start="33085" stop="33051"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVNEIAWNTGGDMFFLTTGNGTVEVLAYPSLQAVNTLNAHTAGCYCIAIDPLGRYFAVGSADSLVSLWSIKEMLCLRTFTKLEWPVRTISFNHTGDYIASASEDLFIDIANVQSGRSVHQIPCRAAMNSVEWNPKHNLLAFAGDDKNKYQADEGVFRIFGFESA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="40333" PGL_stop="47469"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40333" e_stop="40364"/>
            <exon e_start="40421" e_stop="40474"/>
            <exon e_start="41019" e_stop="41224"/>
            <exon e_start="42621" e_stop="42706"/>
            <exon e_start="44622" e_stop="44767"/>
            <exon e_start="45609" e_stop="45728"/>
            <exon e_start="45801" e_stop="45929"/>
            <exon e_start="46689" e_stop="46832"/>
            <exon e_start="46944" e_stop="47469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.812"/>
          <exon-intron don_prob="0.726" acc_prob="0.811" e_score="0.870"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="0.759" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.783" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.812">
            <gDNA_exon_boundary e_start="40333" e_stop="40364" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="40365" i_stop="40420" i_length="56"/>
          </intron>
          <exon e_serial="2" e_score="0.870">
            <gDNA_exon_boundary e_start="40421" e_stop="40474" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.726" acc_prob="0.811">
            <gDNA_intron_boundary i_start="40475" i_stop="41018" i_length="544"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41019" e_stop="41224" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42621" e_stop="42706" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.926" acc_prob="0.759">
            <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44622" e_stop="44767" e_length="146"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.783">
            <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45609" e_stop="45728" e_length="120"/>
          </exon>
          <intron i_serial="6" don_prob="0.977" acc_prob="0.990">
            <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="45801" e_stop="45929" e_length="129"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="46689" e_stop="46832" e_length="144"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111"/>
          </intron>
          <exon e_serial="9" e_score="0.981">
            <gDNA_exon_boundary e_start="46944" e_stop="47469" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40333" stop="40364"/>
              <exon start="40421" stop="40474"/>
              <exon start="41019" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41041" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="46995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41052" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41088" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41088" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41093" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41145" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41183" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45624" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45637" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45681" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45907" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412389" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574420" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46758" stop="46832"/>
              <exon start="46944" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46768" stop="46832"/>
              <exon start="46944" stop="47456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573779" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47095" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47213" stop="47441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225876" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAATAAATATAATTATAACATGACAAGTG : GAGTGATATAGATCTGATATCTCATTTATGTGAAGATTATTGAATATCAAGTAG : GTCATTGCCAGTCCAAAAGAAGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA : ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT : TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG : GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG : GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</gDNA_template>
            <first_frame> W  Q  *  I  *  L  *  H  D  K  W :   S  D  I  D  L  I  S  H  L  C  E  D  Y  *  I  S  S  R :   S  L  P  V  Q  K  K  K  Q  R  D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  N  F  C  V  *  L  H  C  W  G  M  H  Q  C  *  I  K  M  G  L  N  M  L  A  P  W  L  Q  E  E  C  F  Q  M  E  E  L  M  W  T  D  G  H  H  H  F  N  Q  K :   Y  Q  V  *  C  T  P  R  R  L  R  T  G  L  I  L  K  V  T  H  Q  A  S  *  *  S  E  H  S  E  L  I  Y  R  W  I  N  I  L  V :   Y  L  C  S  T  I  S  W  A  D  F  W  A  L  E  G  T  L  *  S  G  W  K  L  L  L  N  A  G  F  *  *  E  D  A  E  A  S  K  I  Q  *  R :   K  K  *  *  E  A  N  R  D  M  S  T  *  M  S  L  F  M  L  L  W  K  L  N  C  Q  W  R  S  L  M  P  G  Y  C  K  H  V  R  Y  W  K  I  C  S  S  L  W :   M  S  H  R  I  S  T  K  N  S  S  C  V  N  L  Q  C  *  M  V  L  F  V  K  K  V  L  K  C  L  V  L  F  P  P  S  T  T  V  L  V  L  G  *  R  G  L  K  P  E  C  D  L  C  V  V  G  F  G  A  C  A  L  I  H  T  T  N  Q  P  A  G  P  I  C  N  R  C  C  Y  N  V  L  C  L  A  L  P  S  G  H  W  C  C  S  V  P  V  L  T  C  L  Y  N  D  M  K  C  V  Y  V  P  V  R  E  D  L  V  T  V  K  P  *  L  W  T  A  *  R  F  A  *  C  R  Q  S  G  V  L  P  T  S  L  Y  Y  S  I  N  F  *  F  V  I  *  R  C  G  N  D  C  N  A  S  E  A  C  L  Y  *  *  K  K  K  E  K </first_frame>
            <second_frame>  G  N  K  Y  N  Y  N  M  T  S   : G  V  I  *  I  *  Y  L  I  Y  V  K  I  I  E  Y  Q  V   : G  H  C  Q  S  K  R  R  N  R  G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   T  F  A  C  N  Y  T  V  G  E  C  I  S  V  R  S  K  W  A  *  T  C  *  P  P  G  F  R  R  N  V  F  K  W  R  S  *  C  G  Q  M  G  I  T  I  S  I  R   : N  I  R  F  N  A  L  P  V  D  S  E  L  A  *  Y  S  K  *  L  I  R  P  H  S  E  A  N  T  Q  N  *  Y  T  G  G  S  I  S  *   : F  T  F  A  V  Q  F  R  G  P  T  S  G  P  *  R  E  L  S  K  A  G  G  S  Y  Y  *  M  P  G  S  D  K  R  T  R  K  H  Q  R  S  S  K   : G  R  N  D  E  R  Q  T  G  I  *  A  P  E  *  A  S  S  C  Y  C  G  S  *  T  A  S  G  D  H  *  C  P  A  I  A  S  T  *  D  I  G  R  S  A  Q  A  Y   : G  *  V  T  G  F  L  Q  K  T  A  V  A  *  T  C  N  A  E  W  Y  S  S  *  R  R  F  S  N  V  W  F  C  F  P  L  P  Q  Q  S  *  S  W  D  E  E  G  *  N  Q  S  V  I  F  V  *  W  D  L  E  L  V  H  *  Y  T  P  L  T  N  Q  Q  V  L  Y  A  T  D  V  A  I  T  S  Y  A  S  H  C  H  R  G  T  G  A  V  L  C  Q  F  *  L  V  S  I  M  I  *  S  V  F  M  F  R  S  G  K  I  *  *  Q  *  S  H  S  C  G  P  L  R  G  L  L  D  V  V  R  A  V  S  Y  Q  R  H  C  I  I  P  L  I  S  S  L  *  F  E  G  V  G  M  T  V  M  R  A  R  R  V  C  T  D  K  K  R  K  K   </second_frame>
            <third_frame>   A  I  N  I  I  I  T  *  Q  V  :  E  *  Y  R  S  D  I  S  F  M  *  R  L  L  N  I  K  *  :  V  I  A  S  P  K  E  E  T  E  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : E  L  L  R  V  T  T  L  L  G  N  A  S  V  L  D  Q  N  G  L  E  H  A  S  P  L  A  S  G  G  M  F  S  N  G  G  A  N  V  D  R  W  A  S  P  F  Q  S  E  :  I  S  G  L  M  H  S  P  S  T  Q  N  W  L  N  T  Q  S  N  S  S  G  L  I  V  K  R  T  L  R  I  D  I  P  V  D  Q  Y  P  S  :  L  P  L  Q  Y  N  F  V  G  R  L  L  G  P  R  G  N  S  L  K  R  V  E  A  T  T  E  C  R  V  L  I  R  G  R  G  S  I  K  D  P  V  K  :  E  E  M  M  R  G  K  P  G  Y  E  H  L  N  E  P  L  H  V  I  V  E  A  E  L  P  V  E  I  I  D  A  R  L  L  Q  A  R  E  I  L  E  D  L  L  K  P  M  :  D  E  S  Q  D  F  Y  K  K  Q  Q  L  R  E  L  A  M  L  N  G  T  L  R  E  E  G  S  Q  M  S  G  S  V  S  P  F  H  N  S  L  S  L  G  M  K  R  A  K  T  R  V  *  S  L  C  S  G  I  W  S  L  C  I  D  T  H  H  *  P  T  S  R  S  Y  M  Q  P  M  L  L  *  R  L  M  P  R  T  A  I  G  A  L  V  L  F  C  A  S  S  N  L  S  L  *  *  Y  E  V  C  L  C  S  G  Q  G  R  F  S  N  S  K  A  I  V  V  D  R  L  E  V  C  L  M  S  S  E  R  C  L  T  N  V  I  V  L  F  H  *  F  L  V  C  D  L  K  V  W  E  *  L  *  C  E  R  G  V  S  V  L  I  K  K  E  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41070" stop="41224"/>
                    <exon start="42621" stop="42706"/>
                    <exon start="44622" stop="44767"/>
                    <exon start="45609" stop="45728"/>
                    <exon start="45801" stop="45929"/>
                    <exon start="46689" stop="46832"/>
                    <exon start="46944" stop="47099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>933</number_coding_nucleotides>
                  <number_encoded_amino_acids>311</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVGESGSHRILSPPVKMSSGRYMAYSPSPSAPQSPHIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCYRLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEISGLMHSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSLPLQYNFVGRLLGPRGNSLKRVEATTECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLSLGMKRAKTRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47077" stop="47313"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGLKPECDLCVVGFGACALIHTTNQPAGPICNRCCYNVLCLALPSGHWCCSVPVLTCLYNDMKCVYVPVREDLVTVKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="40333" e_stop="40364"/>
            <exon e_start="40421" e_stop="40474"/>
            <exon e_start="41019" e_stop="41224"/>
            <exon e_start="42621" e_stop="42706"/>
            <exon e_start="44622" e_stop="44767"/>
            <exon e_start="45609" e_stop="45728"/>
            <exon e_start="45813" e_stop="45929"/>
            <exon e_start="46689" e_stop="46832"/>
            <exon e_start="46944" e_stop="47469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.812"/>
          <exon-intron don_prob="0.726" acc_prob="0.811" e_score="0.870"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.981"/>
          <exon-intron don_prob="0.926" acc_prob="0.759" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.783" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.812">
            <gDNA_exon_boundary e_start="40333" e_stop="40364" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="40365" i_stop="40420" i_length="56"/>
          </intron>
          <exon e_serial="2" e_score="0.870">
            <gDNA_exon_boundary e_start="40421" e_stop="40474" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.726" acc_prob="0.811">
            <gDNA_intron_boundary i_start="40475" i_stop="41018" i_length="544"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="41019" e_stop="41224" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42621" e_stop="42706" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.926" acc_prob="0.759">
            <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44622" e_stop="44767" e_length="146"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.783">
            <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45609" e_stop="45728" e_length="120"/>
          </exon>
          <intron i_serial="6" don_prob="0.977" acc_prob="0.997">
            <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="45813" e_stop="45929" e_length="117"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="46689" e_stop="46832" e_length="144"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111"/>
          </intron>
          <exon e_serial="9" e_score="0.981">
            <gDNA_exon_boundary e_start="46944" e_stop="47469" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40333" stop="40364"/>
              <exon start="40421" stop="40474"/>
              <exon start="41019" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41019" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41034" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41039" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41052" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41056" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273012" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41093" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41120" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446308" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41145" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45723" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45907" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412389" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574420" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46758" stop="46832"/>
              <exon start="46944" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46768" stop="46832"/>
              <exon start="46944" stop="47456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573779" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47095" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47213" stop="47441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225876" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAATAAATATAATTATAACATGACAAGTG : GAGTGATATAGATCTGATATCTCATTTATGTGAAGATTATTGAATATCAAGTAG : GTCATTGCCAGTCCAAAAGAAGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA : ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT : TACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG : GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG : GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</gDNA_template>
            <first_frame> W  Q  *  I  *  L  *  H  D  K  W :   S  D  I  D  L  I  S  H  L  C  E  D  Y  *  I  S  S  R :   S  L  P  V  Q  K  K  K  Q  R  D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  N  F  C  V  *  L  H  C  W  G  M  H  Q  C  *  I  K  M  G  L  N  M  L  A  P  W  L  Q  E  E  C  F  Q  M  E  E  L  M  W  T  D  G  H  H  H  F  N  Q  K :   Y  Q  V  *  C  T  P  R  R  L  R  T  G  L  I  L  K  V  T  H  Q  A  S  *  *  S  E  H  S  E  L  I  Y  R  W  I  N  I  L  V :   T  I  S  W  A  D  F  W  A  L  E  G  T  L  *  S  G  W  K  L  L  L  N  A  G  F  *  *  E  D  A  E  A  S  K  I  Q  *  R :   K  K  *  *  E  A  N  R  D  M  S  T  *  M  S  L  F  M  L  L  W  K  L  N  C  Q  W  R  S  L  M  P  G  Y  C  K  H  V  R  Y  W  K  I  C  S  S  L  W :   M  S  H  R  I  S  T  K  N  S  S  C  V  N  L  Q  C  *  M  V  L  F  V  K  K  V  L  K  C  L  V  L  F  P  P  S  T  T  V  L  V  L  G  *  R  G  L  K  P  E  C  D  L  C  V  V  G  F  G  A  C  A  L  I  H  T  T  N  Q  P  A  G  P  I  C  N  R  C  C  Y  N  V  L  C  L  A  L  P  S  G  H  W  C  C  S  V  P  V  L  T  C  L  Y  N  D  M  K  C  V  Y  V  P  V  R  E  D  L  V  T  V  K  P  *  L  W  T  A  *  R  F  A  *  C  R  Q  S  G  V  L  P  T  S  L  Y  Y  S  I  N  F  *  F  V  I  *  R  C  G  N  D  C  N  A  S  E  A  C  L  Y  *  *  K  K  K  E  K </first_frame>
            <second_frame>  G  N  K  Y  N  Y  N  M  T  S   : G  V  I  *  I  *  Y  L  I  Y  V  K  I  I  E  Y  Q  V   : G  H  C  Q  S  K  R  R  N  R  G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   T  F  A  C  N  Y  T  V  G  E  C  I  S  V  R  S  K  W  A  *  T  C  *  P  P  G  F  R  R  N  V  F  K  W  R  S  *  C  G  Q  M  G  I  T  I  S  I  R   : N  I  R  F  N  A  L  P  V  D  S  E  L  A  *  Y  S  K  *  L  I  R  P  H  S  E  A  N  T  Q  N  *  Y  T  G  G  S  I  S  *   : L  Q  F  R  G  P  T  S  G  P  *  R  E  L  S  K  A  G  G  S  Y  Y  *  M  P  G  S  D  K  R  T  R  K  H  Q  R  S  S  K   : G  R  N  D  E  R  Q  T  G  I  *  A  P  E  *  A  S  S  C  Y  C  G  S  *  T  A  S  G  D  H  *  C  P  A  I  A  S  T  *  D  I  G  R  S  A  Q  A  Y   : G  *  V  T  G  F  L  Q  K  T  A  V  A  *  T  C  N  A  E  W  Y  S  S  *  R  R  F  S  N  V  W  F  C  F  P  L  P  Q  Q  S  *  S  W  D  E  E  G  *  N  Q  S  V  I  F  V  *  W  D  L  E  L  V  H  *  Y  T  P  L  T  N  Q  Q  V  L  Y  A  T  D  V  A  I  T  S  Y  A  S  H  C  H  R  G  T  G  A  V  L  C  Q  F  *  L  V  S  I  M  I  *  S  V  F  M  F  R  S  G  K  I  *  *  Q  *  S  H  S  C  G  P  L  R  G  L  L  D  V  V  R  A  V  S  Y  Q  R  H  C  I  I  P  L  I  S  S  L  *  F  E  G  V  G  M  T  V  M  R  A  R  R  V  C  T  D  K  K  R  K  K   </second_frame>
            <third_frame>   A  I  N  I  I  I  T  *  Q  V  :  E  *  Y  R  S  D  I  S  F  M  *  R  L  L  N  I  K  *  :  V  I  A  S  P  K  E  E  T  E  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : E  L  L  R  V  T  T  L  L  G  N  A  S  V  L  D  Q  N  G  L  E  H  A  S  P  L  A  S  G  G  M  F  S  N  G  G  A  N  V  D  R  W  A  S  P  F  Q  S  E  :  I  S  G  L  M  H  S  P  S  T  Q  N  W  L  N  T  Q  S  N  S  S  G  L  I  V  K  R  T  L  R  I  D  I  P  V  D  Q  Y  P  S  :  Y  N  F  V  G  R  L  L  G  P  R  G  N  S  L  K  R  V  E  A  T  T  E  C  R  V  L  I  R  G  R  G  S  I  K  D  P  V  K  :  E  E  M  M  R  G  K  P  G  Y  E  H  L  N  E  P  L  H  V  I  V  E  A  E  L  P  V  E  I  I  D  A  R  L  L  Q  A  R  E  I  L  E  D  L  L  K  P  M  :  D  E  S  Q  D  F  Y  K  K  Q  Q  L  R  E  L  A  M  L  N  G  T  L  R  E  E  G  S  Q  M  S  G  S  V  S  P  F  H  N  S  L  S  L  G  M  K  R  A  K  T  R  V  *  S  L  C  S  G  I  W  S  L  C  I  D  T  H  H  *  P  T  S  R  S  Y  M  Q  P  M  L  L  *  R  L  M  P  R  T  A  I  G  A  L  V  L  F  C  A  S  S  N  L  S  L  *  *  Y  E  V  C  L  C  S  G  Q  G  R  F  S  N  S  K  A  I  V  V  D  R  L  E  V  C  L  M  S  S  E  R  C  L  T  N  V  I  V  L  F  H  *  F  L  V  C  D  L  K  V  W  E  *  L  *  C  E  R  G  V  S  V  L  I  K  K  E  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41070" stop="41224"/>
                    <exon start="42621" stop="42706"/>
                    <exon start="44622" stop="44767"/>
                    <exon start="45609" stop="45728"/>
                    <exon start="45813" stop="45929"/>
                    <exon start="46689" stop="46832"/>
                    <exon start="46944" stop="47099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>921</number_coding_nucleotides>
                  <number_encoded_amino_acids>307</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVGESGSHRILSPPVKMSSGRYMAYSPSPSAPQSPHIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCYRLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEISGLMHSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSYNFVGRLLGPRGNSLKRVEATTECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLSLGMKRAKTRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47077" stop="47313"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGLKPECDLCVVGFGACALIHTTNQPAGPICNRCCYNVLCLALPSGHWCCSVPVLTCLYNDMKCVYVPVREDLVTVKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="40333" e_stop="40364"/>
            <exon e_start="40421" e_stop="40474"/>
            <exon e_start="41019" e_stop="41224"/>
            <exon e_start="42621" e_stop="42706"/>
            <exon e_start="44622" e_stop="44767"/>
            <exon e_start="44913" e_stop="44936"/>
            <exon e_start="45609" e_stop="45728"/>
            <exon e_start="45801" e_stop="45929"/>
            <exon e_start="46689" e_stop="46832"/>
            <exon e_start="46944" e_stop="47469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.812"/>
          <exon-intron don_prob="0.726" acc_prob="0.811" e_score="0.870"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.942"/>
          <exon-intron don_prob="0.926" acc_prob="0.759" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.783" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.812">
            <gDNA_exon_boundary e_start="40333" e_stop="40364" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="40365" i_stop="40420" i_length="56"/>
          </intron>
          <exon e_serial="2" e_score="0.870">
            <gDNA_exon_boundary e_start="40421" e_stop="40474" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.726" acc_prob="0.811">
            <gDNA_intron_boundary i_start="40475" i_stop="41018" i_length="544"/>
          </intron>
          <exon e_serial="3" e_score="0.942">
            <gDNA_exon_boundary e_start="41019" e_stop="41224" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42621" e_stop="42706" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.926" acc_prob="0.759">
            <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44622" e_stop="44767" e_length="146"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="44768" i_stop="44912" i_length="145"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="44913" e_stop="44936" e_length="24"/>
          </exon>
          <intron i_serial="6" don_prob="0.899" acc_prob="0.783">
            <gDNA_intron_boundary i_start="44937" i_stop="45608" i_length="672"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="45609" e_stop="45728" e_length="120"/>
          </exon>
          <intron i_serial="7" don_prob="0.977" acc_prob="0.990">
            <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="45801" e_stop="45929" e_length="129"/>
          </exon>
          <intron i_serial="8" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="46689" e_stop="46832" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111"/>
          </intron>
          <exon e_serial="10" e_score="0.981">
            <gDNA_exon_boundary e_start="46944" e_stop="47469" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40333" stop="40364"/>
              <exon start="40421" stop="40474"/>
              <exon start="41019" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41058" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="44913" stop="44936"/>
              <exon start="45609" stop="45709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41093" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41145" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483500" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45624" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45637" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45681" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45907" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412389" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574420" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46758" stop="46832"/>
              <exon start="46944" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46768" stop="46832"/>
              <exon start="46944" stop="47456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573779" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47095" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47213" stop="47441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225876" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAATAAATATAATTATAACATGACAAGTG : GAGTGATATAGATCTGATATCTCATTTATGTGAAGATTATTGAATATCAAGTAG : GTCATTGCCAGTCCAAAAGAAGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA : GTAGGTGAAGCTAACAACAACAAG : ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT : TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG : GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG : GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</gDNA_template>
            <first_frame> W  Q  *  I  *  L  *  H  D  K  W :   S  D  I  D  L  I  S  H  L  C  E  D  Y  *  I  S  S  R :   S  L  P  V  Q  K  K  K  Q  R  D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  N  F  C  V  *  L  H  C  W  G  M  H  Q  C  *  I  K  M  G  L  N  M  L  A  P  W  L  Q  E  E  C  F  Q  M  E  E  L  M  W  T  D  G  H  H  H  F  N  Q  K :   *  V  K  L  T  T  T  R :   Y  Q  V  *  C  T  P  R  R  L  R  T  G  L  I  L  K  V  T  H  Q  A  S  *  *  S  E  H  S  E  L  I  Y  R  W  I  N  I  L  V :   Y  L  C  S  T  I  S  W  A  D  F  W  A  L  E  G  T  L  *  S  G  W  K  L  L  L  N  A  G  F  *  *  E  D  A  E  A  S  K  I  Q  *  R :   K  K  *  *  E  A  N  R  D  M  S  T  *  M  S  L  F  M  L  L  W  K  L  N  C  Q  W  R  S  L  M  P  G  Y  C  K  H  V  R  Y  W  K  I  C  S  S  L  W :   M  S  H  R  I  S  T  K  N  S  S  C  V  N  L  Q  C  *  M  V  L  F  V  K  K  V  L  K  C  L  V  L  F  P  P  S  T  T  V  L  V  L  G  *  R  G  L  K  P  E  C  D  L  C  V  V  G  F  G  A  C  A  L  I  H  T  T  N  Q  P  A  G  P  I  C  N  R  C  C  Y  N  V  L  C  L  A  L  P  S  G  H  W  C  C  S  V  P  V  L  T  C  L  Y  N  D  M  K  C  V  Y  V  P  V  R  E  D  L  V  T  V  K  P  *  L  W  T  A  *  R  F  A  *  C  R  Q  S  G  V  L  P  T  S  L  Y  Y  S  I  N  F  *  F  V  I  *  R  C  G  N  D  C  N  A  S  E  A  C  L  Y  *  *  K  K  K  E  K </first_frame>
            <second_frame>  G  N  K  Y  N  Y  N  M  T  S   : G  V  I  *  I  *  Y  L  I  Y  V  K  I  I  E  Y  Q  V   : G  H  C  Q  S  K  R  R  N  R  G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   T  F  A  C  N  Y  T  V  G  E  C  I  S  V  R  S  K  W  A  *  T  C  *  P  P  G  F  R  R  N  V  F  K  W  R  S  *  C  G  Q  M  G  I  T  I  S  I  R   : S  R  *  S  *  Q  Q  Q   : D  I  R  F  N  A  L  P  V  D  S  E  L  A  *  Y  S  K  *  L  I  R  P  H  S  E  A  N  T  Q  N  *  Y  T  G  G  S  I  S  *   : F  T  F  A  V  Q  F  R  G  P  T  S  G  P  *  R  E  L  S  K  A  G  G  S  Y  Y  *  M  P  G  S  D  K  R  T  R  K  H  Q  R  S  S  K   : G  R  N  D  E  R  Q  T  G  I  *  A  P  E  *  A  S  S  C  Y  C  G  S  *  T  A  S  G  D  H  *  C  P  A  I  A  S  T  *  D  I  G  R  S  A  Q  A  Y   : G  *  V  T  G  F  L  Q  K  T  A  V  A  *  T  C  N  A  E  W  Y  S  S  *  R  R  F  S  N  V  W  F  C  F  P  L  P  Q  Q  S  *  S  W  D  E  E  G  *  N  Q  S  V  I  F  V  *  W  D  L  E  L  V  H  *  Y  T  P  L  T  N  Q  Q  V  L  Y  A  T  D  V  A  I  T  S  Y  A  S  H  C  H  R  G  T  G  A  V  L  C  Q  F  *  L  V  S  I  M  I  *  S  V  F  M  F  R  S  G  K  I  *  *  Q  *  S  H  S  C  G  P  L  R  G  L  L  D  V  V  R  A  V  S  Y  Q  R  H  C  I  I  P  L  I  S  S  L  *  F  E  G  V  G  M  T  V  M  R  A  R  R  V  C  T  D  K  K  R  K  K   </second_frame>
            <third_frame>   A  I  N  I  I  I  T  *  Q  V  :  E  *  Y  R  S  D  I  S  F  M  *  R  L  L  N  I  K  *  :  V  I  A  S  P  K  E  E  T  E  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : E  L  L  R  V  T  T  L  L  G  N  A  S  V  L  D  Q  N  G  L  E  H  A  S  P  L  A  S  G  G  M  F  S  N  G  G  A  N  V  D  R  W  A  S  P  F  Q  S  E  :  V  G  E  A  N  N  N  K  :  I  S  G  L  M  H  S  P  S  T  Q  N  W  L  N  T  Q  S  N  S  S  G  L  I  V  K  R  T  L  R  I  D  I  P  V  D  Q  Y  P  S  :  L  P  L  Q  Y  N  F  V  G  R  L  L  G  P  R  G  N  S  L  K  R  V  E  A  T  T  E  C  R  V  L  I  R  G  R  G  S  I  K  D  P  V  K  :  E  E  M  M  R  G  K  P  G  Y  E  H  L  N  E  P  L  H  V  I  V  E  A  E  L  P  V  E  I  I  D  A  R  L  L  Q  A  R  E  I  L  E  D  L  L  K  P  M  :  D  E  S  Q  D  F  Y  K  K  Q  Q  L  R  E  L  A  M  L  N  G  T  L  R  E  E  G  S  Q  M  S  G  S  V  S  P  F  H  N  S  L  S  L  G  M  K  R  A  K  T  R  V  *  S  L  C  S  G  I  W  S  L  C  I  D  T  H  H  *  P  T  S  R  S  Y  M  Q  P  M  L  L  *  R  L  M  P  R  T  A  I  G  A  L  V  L  F  C  A  S  S  N  L  S  L  *  *  Y  E  V  C  L  C  S  G  Q  G  R  F  S  N  S  K  A  I  V  V  D  R  L  E  V  C  L  M  S  S  E  R  C  L  T  N  V  I  V  L  F  H  *  F  L  V  C  D  L  K  V  W  E  *  L  *  C  E  R  G  V  S  V  L  I  K  K  E  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41070" stop="41224"/>
                    <exon start="42621" stop="42706"/>
                    <exon start="44622" stop="44767"/>
                    <exon start="44913" stop="44936"/>
                    <exon start="45609" stop="45728"/>
                    <exon start="45801" stop="45929"/>
                    <exon start="46689" stop="46832"/>
                    <exon start="46944" stop="47099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>957</number_coding_nucleotides>
                  <number_encoded_amino_acids>319</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVGESGSHRILSPPVKMSSGRYMAYSPSPSAPQSPHIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCYRLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEVGEANNNKISGLMHSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSLPLQYNFVGRLLGPRGNSLKRVEATTECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLSLGMKRAKTRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47077" stop="47313"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGLKPECDLCVVGFGACALIHTTNQPAGPICNRCCYNVLCLALPSGHWCCSVPVLTCLYNDMKCVYVPVREDLVTVKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="41039" e_stop="41224"/>
            <exon e_start="42621" e_stop="42706"/>
            <exon e_start="45609" e_stop="45728"/>
            <exon e_start="45801" e_stop="45929"/>
            <exon e_start="46689" e_stop="46832"/>
            <exon e_start="46944" e_stop="47469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.973"/>
          <exon-intron don_prob="0.926" acc_prob="0.783" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="41039" e_stop="41224" e_length="186"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42621" e_stop="42706" e_length="86"/>
          </exon>
          <intron i_serial="2" don_prob="0.926" acc_prob="0.783">
            <gDNA_intron_boundary i_start="42707" i_stop="45608" i_length="2902"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="45609" e_stop="45728" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.990">
            <gDNA_intron_boundary i_start="45729" i_stop="45800" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="45801" e_stop="45929" e_length="129"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="46689" e_stop="46832" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="46944" e_stop="47469" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41039" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41049" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41071" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="45609" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249595" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45624" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45637" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45681" stop="45728"/>
              <exon start="45801" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45907" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412389" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574420" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46758" stop="46832"/>
              <exon start="46944" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46768" stop="46832"/>
              <exon start="46944" stop="47456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573779" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47095" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47213" stop="47441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225876" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT : TTACCTTTGCAGTACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG : GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG : GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</gDNA_template>
            <first_frame> R  N  R  G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   Y  Q  V  *  C  T  P  R  R  L  R  T  G  L  I  L  K  V  T  H  Q  A  S  *  *  S  E  H  S  E  L  I  Y  R  W  I  N  I  L  V :   Y  L  C  S  T  I  S  W  A  D  F  W  A  L  E  G  T  L  *  S  G  W  K  L  L  L  N  A  G  F  *  *  E  D  A  E  A  S  K  I  Q  *  R :   K  K  *  *  E  A  N  R  D  M  S  T  *  M  S  L  F  M  L  L  W  K  L  N  C  Q  W  R  S  L  M  P  G  Y  C  K  H  V  R  Y  W  K  I  C  S  S  L  W :   M  S  H  R  I  S  T  K  N  S  S  C  V  N  L  Q  C  *  M  V  L  F  V  K  K  V  L  K  C  L  V  L  F  P  P  S  T  T  V  L  V  L  G  *  R  G  L  K  P  E  C  D  L  C  V  V  G  F  G  A  C  A  L  I  H  T  T  N  Q  P  A  G  P  I  C  N  R  C  C  Y  N  V  L  C  L  A  L  P  S  G  H  W  C  C  S  V  P  V  L  T  C  L  Y  N  D  M  K  C  V  Y  V  P  V  R  E  D  L  V  T  V  K  P  *  L  W  T  A  *  R  F  A  *  C  R  Q  S  G  V  L  P  T  S  L  Y  Y  S  I  N  F  *  F  V  I  *  R  C  G  N  D  C  N  A  S  E  A  C  L  Y  *  *  K  K  K  E  K </first_frame>
            <second_frame>  E  T  E  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : D  I  R  F  N  A  L  P  V  D  S  E  L  A  *  Y  S  K  *  L  I  R  P  H  S  E  A  N  T  Q  N  *  Y  T  G  G  S  I  S  *   : F  T  F  A  V  Q  F  R  G  P  T  S  G  P  *  R  E  L  S  K  A  G  G  S  Y  Y  *  M  P  G  S  D  K  R  T  R  K  H  Q  R  S  S  K   : G  R  N  D  E  R  Q  T  G  I  *  A  P  E  *  A  S  S  C  Y  C  G  S  *  T  A  S  G  D  H  *  C  P  A  I  A  S  T  *  D  I  G  R  S  A  Q  A  Y   : G  *  V  T  G  F  L  Q  K  T  A  V  A  *  T  C  N  A  E  W  Y  S  S  *  R  R  F  S  N  V  W  F  C  F  P  L  P  Q  Q  S  *  S  W  D  E  E  G  *  N  Q  S  V  I  F  V  *  W  D  L  E  L  V  H  *  Y  T  P  L  T  N  Q  Q  V  L  Y  A  T  D  V  A  I  T  S  Y  A  S  H  C  H  R  G  T  G  A  V  L  C  Q  F  *  L  V  S  I  M  I  *  S  V  F  M  F  R  S  G  K  I  *  *  Q  *  S  H  S  C  G  P  L  R  G  L  L  D  V  V  R  A  V  S  Y  Q  R  H  C  I  I  P  L  I  S  S  L  *  F  E  G  V  G  M  T  V  M  R  A  R  R  V  C  T  D  K  K  R  K  K   </second_frame>
            <third_frame>   K  Q  R  D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  I  S  G  L  M  H  S  P  S  T  Q  N  W  L  N  T  Q  S  N  S  S  G  L  I  V  K  R  T  L  R  I  D  I  P  V  D  Q  Y  P  S  :  L  P  L  Q  Y  N  F  V  G  R  L  L  G  P  R  G  N  S  L  K  R  V  E  A  T  T  E  C  R  V  L  I  R  G  R  G  S  I  K  D  P  V  K  :  E  E  M  M  R  G  K  P  G  Y  E  H  L  N  E  P  L  H  V  I  V  E  A  E  L  P  V  E  I  I  D  A  R  L  L  Q  A  R  E  I  L  E  D  L  L  K  P  M  :  D  E  S  Q  D  F  Y  K  K  Q  Q  L  R  E  L  A  M  L  N  G  T  L  R  E  E  G  S  Q  M  S  G  S  V  S  P  F  H  N  S  L  S  L  G  M  K  R  A  K  T  R  V  *  S  L  C  S  G  I  W  S  L  C  I  D  T  H  H  *  P  T  S  R  S  Y  M  Q  P  M  L  L  *  R  L  M  P  R  T  A  I  G  A  L  V  L  F  C  A  S  S  N  L  S  L  *  *  Y  E  V  C  L  C  S  G  Q  G  R  F  S  N  S  K  A  I  V  V  D  R  L  E  V  C  L  M  S  S  E  R  C  L  T  N  V  I  V  L  F  H  *  F  L  V  C  D  L  K  V  W  E  *  L  *  C  E  R  G  V  S  V  L  I  K  K  E  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42701" stop="42706"/>
                    <exon start="45609" stop="45728"/>
                    <exon start="45801" stop="45929"/>
                    <exon start="46689" stop="46832"/>
                    <exon start="46944" stop="47099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRISGLMHSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSLPLQYNFVGRLLGPRGNSLKRVEATTECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLSLGMKRAKTRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41081" stop="41224"/>
                    <exon start="42621" stop="42706"/>
                    <exon start="45609" stop="45621"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWQSSDSVAAGEDVFRKIHGLLTISVCSSVSSYRRTSLCFLCHRRAREVSLRVTCRTPQTRPICARPSSLLSIAESGYQV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47077" stop="47313"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGLKPECDLCVVGFGACALIHTTNQPAGPICNRCCYNVLCLALPSGHWCCSVPVLTCLYNDMKCVYVPVREDLVTVKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="41389" e_stop="41554"/>
            <exon e_start="42612" e_stop="42706"/>
            <exon e_start="44622" e_stop="44767"/>
            <exon e_start="45609" e_stop="45728"/>
            <exon e_start="45813" e_stop="45929"/>
            <exon e_start="46689" e_stop="46832"/>
            <exon e_start="46944" e_stop="47469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.000" e_score="0.777"/>
          <exon-intron don_prob="0.926" acc_prob="0.759" e_score="0.937"/>
          <exon-intron don_prob="0.998" acc_prob="0.783" e_score="0.979"/>
          <exon-intron don_prob="0.977" acc_prob="0.997" e_score="0.975"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="0.983"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="0.979"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.777">
            <gDNA_exon_boundary e_start="41389" e_stop="41554" e_length="166"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.000">
            <gDNA_intron_boundary i_start="41555" i_stop="42611" i_length="1057"/>
          </intron>
          <exon e_serial="2" e_score="0.937">
            <gDNA_exon_boundary e_start="42612" e_stop="42706" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.926" acc_prob="0.759">
            <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="44622" e_stop="44767" e_length="146"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.783">
            <gDNA_intron_boundary i_start="44768" i_stop="45608" i_length="841"/>
          </intron>
          <exon e_serial="4" e_score="0.975">
            <gDNA_exon_boundary e_start="45609" e_stop="45728" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.977" acc_prob="0.997">
            <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="45813" e_stop="45929" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759"/>
          </intron>
          <exon e_serial="6" e_score="0.979">
            <gDNA_exon_boundary e_start="46689" e_stop="46832" e_length="144"/>
          </exon>
          <intron i_serial="6" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111"/>
          </intron>
          <exon e_serial="7" e_score="0.981">
            <gDNA_exon_boundary e_start="46944" e_stop="47469" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41389" stop="41554"/>
              <exon start="42612" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454685" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41389" stop="41554"/>
              <exon start="42612" stop="42706"/>
              <exon start="44622" stop="44767"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45723" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45907" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412389" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574420" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46758" stop="46832"/>
              <exon start="46944" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46768" stop="46832"/>
              <exon start="46944" stop="47456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573779" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47095" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47213" stop="47441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225876" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTTGATTTTCATTTTTTGGTTCAACGATTTATAAGTTGATTTATCTGAAAAGATCTGGTTTAGCTTCTTACTTAGTTAAAAGCATCAGTTTAAGGTTCAATATACTTTAACGCAATTTCAAACAATCTGGATTGGTTCTATGAATTCCTTGGATACTTTGATCAG : TGTTAACAGGTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAA : ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT : TACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG : GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG : GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</gDNA_template>
            <first_frame> T  *  F  S  F  F  G  S  T  I  Y  K  L  I  Y  L  K  R  S  G  L  A  S  Y  L  V  K  S  I  S  L  R  F  N  I  L  *  R  N  F  K  Q  S  G  L  V  L  *  I  P  W  I  L  *  S   : V  L  T  G  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  N  F  C  V  *  L  H  C  W  G  M  H  Q  C  *  I  K  M  G  L  N  M  L  A  P  W  L  Q  E  E  C  F  Q  M  E  E  L  M  W  T  D  G  H  H  H  F  N  Q  K :   Y  Q  V  *  C  T  P  R  R  L  R  T  G  L  I  L  K  V  T  H  Q  A  S  *  *  S  E  H  S  E  L  I  Y  R  W  I  N  I  L  V :   T  I  S  W  A  D  F  W  A  L  E  G  T  L  *  S  G  W  K  L  L  L  N  A  G  F  *  *  E  D  A  E  A  S  K  I  Q  *  R :   K  K  *  *  E  A  N  R  D  M  S  T  *  M  S  L  F  M  L  L  W  K  L  N  C  Q  W  R  S  L  M  P  G  Y  C  K  H  V  R  Y  W  K  I  C  S  S  L  W :   M  S  H  R  I  S  T  K  N  S  S  C  V  N  L  Q  C  *  M  V  L  F  V  K  K  V  L  K  C  L  V  L  F  P  P  S  T  T  V  L  V  L  G  *  R  G  L  K  P  E  C  D  L  C  V  V  G  F  G  A  C  A  L  I  H  T  T  N  Q  P  A  G  P  I  C  N  R  C  C  Y  N  V  L  C  L  A  L  P  S  G  H  W  C  C  S  V  P  V  L  T  C  L  Y  N  D  M  K  C  V  Y  V  P  V  R  E  D  L  V  T  V  K  P  *  L  W  T  A  *  R  F  A  *  C  R  Q  S  G  V  L  P  T  S  L  Y  Y  S  I  N  F  *  F  V  I  *  R  C  G  N  D  C  N  A  S  E  A  C  L  Y  *  *  K  K  K  E  K </first_frame>
            <second_frame>  L  D  F  H  F  L  V  Q  R  F  I  S  *  F  I  *  K  D  L  V  *  L  L  T  *  L  K  A  S  V  *  G  S  I  Y  F  N  A  I  S  N  N  L  D  W  F  Y  E  F  L  G  Y  F  D  Q  :  C  *  Q  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   T  F  A  C  N  Y  T  V  G  E  C  I  S  V  R  S  K  W  A  *  T  C  *  P  P  G  F  R  R  N  V  F  K  W  R  S  *  C  G  Q  M  G  I  T  I  S  I  R   : N  I  R  F  N  A  L  P  V  D  S  E  L  A  *  Y  S  K  *  L  I  R  P  H  S  E  A  N  T  Q  N  *  Y  T  G  G  S  I  S  *   : L  Q  F  R  G  P  T  S  G  P  *  R  E  L  S  K  A  G  G  S  Y  Y  *  M  P  G  S  D  K  R  T  R  K  H  Q  R  S  S  K   : G  R  N  D  E  R  Q  T  G  I  *  A  P  E  *  A  S  S  C  Y  C  G  S  *  T  A  S  G  D  H  *  C  P  A  I  A  S  T  *  D  I  G  R  S  A  Q  A  Y   : G  *  V  T  G  F  L  Q  K  T  A  V  A  *  T  C  N  A  E  W  Y  S  S  *  R  R  F  S  N  V  W  F  C  F  P  L  P  Q  Q  S  *  S  W  D  E  E  G  *  N  Q  S  V  I  F  V  *  W  D  L  E  L  V  H  *  Y  T  P  L  T  N  Q  Q  V  L  Y  A  T  D  V  A  I  T  S  Y  A  S  H  C  H  R  G  T  G  A  V  L  C  Q  F  *  L  V  S  I  M  I  *  S  V  F  M  F  R  S  G  K  I  *  *  Q  *  S  H  S  C  G  P  L  R  G  L  L  D  V  V  R  A  V  S  Y  Q  R  H  C  I  I  P  L  I  S  S  L  *  F  E  G  V  G  M  T  V  M  R  A  R  R  V  C  T  D  K  K  R  K  K   </second_frame>
            <third_frame>   L  I  F  I  F  W  F  N  D  L  *  V  D  L  S  E  K  I  W  F  S  F  L  L  S  *  K  H  Q  F  K  V  Q  Y  T  L  T  Q  F  Q  T  I  W  I  G  S  M  N  S  L  D  T  L  I  S :   V  N  R  Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : E  L  L  R  V  T  T  L  L  G  N  A  S  V  L  D  Q  N  G  L  E  H  A  S  P  L  A  S  G  G  M  F  S  N  G  G  A  N  V  D  R  W  A  S  P  F  Q  S  E  :  I  S  G  L  M  H  S  P  S  T  Q  N  W  L  N  T  Q  S  N  S  S  G  L  I  V  K  R  T  L  R  I  D  I  P  V  D  Q  Y  P  S  :  Y  N  F  V  G  R  L  L  G  P  R  G  N  S  L  K  R  V  E  A  T  T  E  C  R  V  L  I  R  G  R  G  S  I  K  D  P  V  K  :  E  E  M  M  R  G  K  P  G  Y  E  H  L  N  E  P  L  H  V  I  V  E  A  E  L  P  V  E  I  I  D  A  R  L  L  Q  A  R  E  I  L  E  D  L  L  K  P  M  :  D  E  S  Q  D  F  Y  K  K  Q  Q  L  R  E  L  A  M  L  N  G  T  L  R  E  E  G  S  Q  M  S  G  S  V  S  P  F  H  N  S  L  S  L  G  M  K  R  A  K  T  R  V  *  S  L  C  S  G  I  W  S  L  C  I  D  T  H  H  *  P  T  S  R  S  Y  M  Q  P  M  L  L  *  R  L  M  P  R  T  A  I  G  A  L  V  L  F  C  A  S  S  N  L  S  L  *  *  Y  E  V  C  L  C  S  G  Q  G  R  F  S  N  S  K  A  I  V  V  D  R  L  E  V  C  L  M  S  S  E  R  C  L  T  N  V  I  V  L  F  H  *  F  L  V  C  D  L  K  V  W  E  *  L  *  C  E  R  G  V  S  V  L  I  K  K  E  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41469" stop="41554"/>
                    <exon start="42612" stop="42706"/>
                    <exon start="44622" stop="44767"/>
                    <exon start="45609" stop="45728"/>
                    <exon start="45813" stop="45929"/>
                    <exon start="46689" stop="46832"/>
                    <exon start="46944" stop="47099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>861</number_coding_nucleotides>
                  <number_encoded_amino_acids>287</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHQFKVQYTLTQFQTIWIGSMNSLDTLISVNRYLSELLAERHKLGPFVPVLPHCYRLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEISGLMHSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSYNFVGRLLGPRGNSLKRVEATTECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLSLGMKRAKTRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47077" stop="47313"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGLKPECDLCVVGFGACALIHTTNQPAGPICNRCCYNVLCLALPSGHWCCSVPVLTCLYNDMKCVYVPVREDLVTVKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="41045" e_stop="41224"/>
            <exon e_start="42621" e_stop="42706"/>
            <exon e_start="45609" e_stop="45728"/>
            <exon e_start="45813" e_stop="45929"/>
            <exon e_start="46689" e_stop="46832"/>
            <exon e_start="46944" e_stop="47469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.978"/>
          <exon-intron don_prob="0.926" acc_prob="0.783" e_score="0.965"/>
          <exon-intron don_prob="0.977" acc_prob="0.997" e_score="0.983"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="0.983"/>
          <exon-intron don_prob="0.989" acc_prob="0.992" e_score="0.979"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="41045" e_stop="41224" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="42621" e_stop="42706" e_length="86"/>
          </exon>
          <intron i_serial="2" don_prob="0.926" acc_prob="0.783">
            <gDNA_intron_boundary i_start="42707" i_stop="45608" i_length="2902"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="45609" e_stop="45728" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.997">
            <gDNA_intron_boundary i_start="45729" i_stop="45812" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="0.983">
            <gDNA_exon_boundary e_start="45813" e_stop="45929" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="45930" i_stop="46688" i_length="759"/>
          </intron>
          <exon e_serial="5" e_score="0.979">
            <gDNA_exon_boundary e_start="46689" e_stop="46832" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.992">
            <gDNA_intron_boundary i_start="46833" i_stop="46943" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="46944" e_stop="47469" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41045" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="45609" stop="45728"/>
              <exon start="45813" stop="45929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579544" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45723" stop="45728"/>
              <exon start="45813" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45907" stop="45929"/>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412389" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46689" stop="46832"/>
              <exon start="46944" stop="47460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574420" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46758" stop="46832"/>
              <exon start="46944" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46768" stop="46832"/>
              <exon start="46944" stop="47456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573779" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47095" stop="47469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47213" stop="47441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225876" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : ATATCAGGTTTAATGCACTCCCCGTCGACTCAGAACTGGCTTAATACTCAAAGTAACTCATCAGGCCTCATAGTGAAGCGAACACTCAGAATTGATATACCGGTGGATCAATATCCTAGT : TACAATTTCGTGGGCCGACTTCTGGGCCCTAGAGGGAACTCTCTAAAGCGGGTGGAAGCTACTACTGAATGCCGGGTTCTGATAAGAGGACGCGGAAGCATCAAAGATCCAGTAAAG : GAAGAAATGATGAGAGGCAAACCGGGATATGAGCACCTGAATGAGCCTCTTCATGTTATTGTGGAAGCTGAACTGCCAGTGGAGATCATTGATGCCCGGCTATTGCAAGCACGTGAGATATTGGAAGATCTGCTCAAGCCTATG : GATGAGTCACAGGATTTCTACAAAAAACAGCAGTTGCGTGAACTTGCAATGCTGAATGGTACTCTTCGTGAAGAAGGTTCTCAAATGTCTGGTTCTGTTTCCCCCTTCCACAACAGTCTTAGTCTTGGGATGAAGAGGGCTAAAACCAGAGTGTGATCTTTGTGTAGTGGGATTTGGAGCTTGTGCATTGATACACACCACTAACCAACCAGCAGGTCCTATATGCAACCGATGTTGCTATAACGTCTTATGCCTCGCACTGCCATCGGGGCACTGGTGCTGTTCTGTGCCAGTTCTAACTTGTCTCTATAATGATATGAAGTGTGTTTATGTTCCGGTCAGGGAAGATTTAGTAACAGTAAAGCCATAGTTGTGGACCGCTTAGAGGTTTGCTTGATGTCGTCAGAGCGGTGTCTTACCAACGTCATTGTATTATTCCATTAATTTCTAGTTTGTGATTTGAAGGTGTGGGAATGACTGTAATGCGAGCGAGGCGTGTCTGTACTGATAAAAAAAGAAAGAAAAA</gDNA_template>
            <first_frame> R  G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   Y  Q  V  *  C  T  P  R  R  L  R  T  G  L  I  L  K  V  T  H  Q  A  S  *  *  S  E  H  S  E  L  I  Y  R  W  I  N  I  L  V :   T  I  S  W  A  D  F  W  A  L  E  G  T  L  *  S  G  W  K  L  L  L  N  A  G  F  *  *  E  D  A  E  A  S  K  I  Q  *  R :   K  K  *  *  E  A  N  R  D  M  S  T  *  M  S  L  F  M  L  L  W  K  L  N  C  Q  W  R  S  L  M  P  G  Y  C  K  H  V  R  Y  W  K  I  C  S  S  L  W :   M  S  H  R  I  S  T  K  N  S  S  C  V  N  L  Q  C  *  M  V  L  F  V  K  K  V  L  K  C  L  V  L  F  P  P  S  T  T  V  L  V  L  G  *  R  G  L  K  P  E  C  D  L  C  V  V  G  F  G  A  C  A  L  I  H  T  T  N  Q  P  A  G  P  I  C  N  R  C  C  Y  N  V  L  C  L  A  L  P  S  G  H  W  C  C  S  V  P  V  L  T  C  L  Y  N  D  M  K  C  V  Y  V  P  V  R  E  D  L  V  T  V  K  P  *  L  W  T  A  *  R  F  A  *  C  R  Q  S  G  V  L  P  T  S  L  Y  Y  S  I  N  F  *  F  V  I  *  R  C  G  N  D  C  N  A  S  E  A  C  L  Y  *  *  K  K  K  E  K </first_frame>
            <second_frame>  E  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : D  I  R  F  N  A  L  P  V  D  S  E  L  A  *  Y  S  K  *  L  I  R  P  H  S  E  A  N  T  Q  N  *  Y  T  G  G  S  I  S  *   : L  Q  F  R  G  P  T  S  G  P  *  R  E  L  S  K  A  G  G  S  Y  Y  *  M  P  G  S  D  K  R  T  R  K  H  Q  R  S  S  K   : G  R  N  D  E  R  Q  T  G  I  *  A  P  E  *  A  S  S  C  Y  C  G  S  *  T  A  S  G  D  H  *  C  P  A  I  A  S  T  *  D  I  G  R  S  A  Q  A  Y   : G  *  V  T  G  F  L  Q  K  T  A  V  A  *  T  C  N  A  E  W  Y  S  S  *  R  R  F  S  N  V  W  F  C  F  P  L  P  Q  Q  S  *  S  W  D  E  E  G  *  N  Q  S  V  I  F  V  *  W  D  L  E  L  V  H  *  Y  T  P  L  T  N  Q  Q  V  L  Y  A  T  D  V  A  I  T  S  Y  A  S  H  C  H  R  G  T  G  A  V  L  C  Q  F  *  L  V  S  I  M  I  *  S  V  F  M  F  R  S  G  K  I  *  *  Q  *  S  H  S  C  G  P  L  R  G  L  L  D  V  V  R  A  V  S  Y  Q  R  H  C  I  I  P  L  I  S  S  L  *  F  E  G  V  G  M  T  V  M  R  A  R  R  V  C  T  D  K  K  R  K  K   </second_frame>
            <third_frame>   R  D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  I  S  G  L  M  H  S  P  S  T  Q  N  W  L  N  T  Q  S  N  S  S  G  L  I  V  K  R  T  L  R  I  D  I  P  V  D  Q  Y  P  S  :  Y  N  F  V  G  R  L  L  G  P  R  G  N  S  L  K  R  V  E  A  T  T  E  C  R  V  L  I  R  G  R  G  S  I  K  D  P  V  K  :  E  E  M  M  R  G  K  P  G  Y  E  H  L  N  E  P  L  H  V  I  V  E  A  E  L  P  V  E  I  I  D  A  R  L  L  Q  A  R  E  I  L  E  D  L  L  K  P  M  :  D  E  S  Q  D  F  Y  K  K  Q  Q  L  R  E  L  A  M  L  N  G  T  L  R  E  E  G  S  Q  M  S  G  S  V  S  P  F  H  N  S  L  S  L  G  M  K  R  A  K  T  R  V  *  S  L  C  S  G  I  W  S  L  C  I  D  T  H  H  *  P  T  S  R  S  Y  M  Q  P  M  L  L  *  R  L  M  P  R  T  A  I  G  A  L  V  L  F  C  A  S  S  N  L  S  L  *  *  Y  E  V  C  L  C  S  G  Q  G  R  F  S  N  S  K  A  I  V  V  D  R  L  E  V  C  L  M  S  S  E  R  C  L  T  N  V  I  V  L  F  H  *  F  L  V  C  D  L  K  V  W  E  *  L  *  C  E  R  G  V  S  V  L  I  K  K  E  R  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42701" stop="42706"/>
                    <exon start="45609" stop="45728"/>
                    <exon start="45813" stop="45929"/>
                    <exon start="46689" stop="46832"/>
                    <exon start="46944" stop="47099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRISGLMHSPSTQNWLNTQSNSSGLIVKRTLRIDIPVDQYPSYNFVGRLLGPRGNSLKRVEATTECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEPLHVIVEAELPVEIIDARLLQAREILEDLLKPMDESQDFYKKQQLRELAMLNGTLREEGSQMSGSVSPFHNSLSLGMKRAKTRV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41081" stop="41224"/>
                    <exon start="42621" stop="42706"/>
                    <exon start="45609" stop="45621"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWQSSDSVAAGEDVFRKIHGLLTISVCSSVSSYRRTSLCFLCHRRAREVSLRVTCRTPQTRPICARPSSLLSIAESGYQV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="6" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47077" stop="47313"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGLKPECDLCVVGFGACALIHTTNQPAGPICNRCCYNVLCLALPSGHWCCSVPVLTCLYNDMKCVYVPVREDLVTVKP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="40333" e_stop="40364"/>
            <exon e_start="40421" e_stop="40474"/>
            <exon e_start="41019" e_stop="41224"/>
            <exon e_start="42621" e_stop="42706"/>
            <exon e_start="44622" e_stop="44921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.812"/>
          <exon-intron don_prob="0.726" acc_prob="0.811" e_score="0.870"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.942"/>
          <exon-intron don_prob="0.926" acc_prob="0.759" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.812">
            <gDNA_exon_boundary e_start="40333" e_stop="40364" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="40365" i_stop="40420" i_length="56"/>
          </intron>
          <exon e_serial="2" e_score="0.870">
            <gDNA_exon_boundary e_start="40421" e_stop="40474" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.726" acc_prob="0.811">
            <gDNA_intron_boundary i_start="40475" i_stop="41018" i_length="544"/>
          </intron>
          <exon e_serial="3" e_score="0.942">
            <gDNA_exon_boundary e_start="41019" e_stop="41224" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42621" e_stop="42706" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.926" acc_prob="0.759">
            <gDNA_intron_boundary i_start="42707" i_stop="44621" i_length="1915"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44622" e_stop="44921" e_length="300"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40333" stop="40364"/>
              <exon start="40421" stop="40474"/>
              <exon start="41019" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E479501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41055" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41056" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41056" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41093" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41145" stop="41224"/>
              <exon start="42621" stop="42706"/>
              <exon start="44622" stop="44727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483500" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAATAAATATAATTATAACATGACAAGTG : GAGTGATATAGATCTGATATCTCATTTATGTGAAGATTATTGAATATCAAGTAG : GTCATTGCCAGTCCAAAAGAAGAAACAGAGGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGG : AACTTTTGCGTGTAACTACACTGTTGGGGAATGCATCAGTGTTAGATCAAAATGGGCTTGAACATGCTAGCCCCCTGGCTTCAGGAGGAATGTTTTCAAATGGAGGAGCTAATGTGGACAGATGGGCATCACCATTTCAATCAGAAGTATGGATACTAACTATTAACATAACCTCTTTTAGATCTGATTTTATATGTTTGAAAAGCTTTTCTGACAAAGGTTTCTAATTTCCATGCTAACTTGATTTCTTATTAAGTGTTTTAACTTCAATCTCCACTTGTCTCGTGACAGGTAGGTGAA</gDNA_template>
            <first_frame> W  Q  *  I  *  L  *  H  D  K  W :   S  D  I  D  L  I  S  H  L  C  E  D  Y  *  I  S  S  R :   S  L  P  V  Q  K  K  K  Q  R  D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  :  N  F  C  V  *  L  H  C  W  G  M  H  Q  C  *  I  K  M  G  L  N  M  L  A  P  W  L  Q  E  E  C  F  Q  M  E  E  L  M  W  T  D  G  H  H  H  F  N  Q  K  Y  G  Y  *  L  L  T  *  P  L  L  D  L  I  L  Y  V  *  K  A  F  L  T  K  V  S  N  F  H  A  N  L  I  S  Y  *  V  F  *  L  Q  S  P  L  V  S  *  Q  V  G  E </first_frame>
            <second_frame>  G  N  K  Y  N  Y  N  M  T  S   : G  V  I  *  I  *  Y  L  I  Y  V  K  I  I  E  Y  Q  V   : G  H  C  Q  S  K  R  R  N  R  G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G :   T  F  A  C  N  Y  T  V  G  E  C  I  S  V  R  S  K  W  A  *  T  C  *  P  P  G  F  R  R  N  V  F  K  W  R  S  *  C  G  Q  M  G  I  T  I  S  I  R  S  M  D  T  N  Y  *  H  N  L  F  *  I  *  F  Y  M  F  E  K  L  F  *  Q  R  F  L  I  S  M  L  T  *  F  L  I  K  C  F  N  F  N  L  H  L  S  R  D  R  *  V   </second_frame>
            <third_frame>   A  I  N  I  I  I  T  *  Q  V  :  E  *  Y  R  S  D  I  S  F  M  *  R  L  L  N  I  K  *  :  V  I  A  S  P  K  E  E  T  E  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q   : E  L  L  R  V  T  T  L  L  G  N  A  S  V  L  D  Q  N  G  L  E  H  A  S  P  L  A  S  G  G  M  F  S  N  G  G  A  N  V  D  R  W  A  S  P  F  Q  S  E  V  W  I  L  T  I  N  I  T  S  F  R  S  D  F  I  C  L  K  S  F  S  D  K  G  F  *  F  P  C  *  L  D  F  L  L  S  V  L  T  S  I  S  T  C  L  V  T  G  R  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41070" stop="41224"/>
                    <exon start="42621" stop="42706"/>
                    <exon start="44622" stop="44848"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVGESGSHRILSPPVKMSSGRYMAYSPSPSAPQSPHIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCYRLLNQELLRVTTLLGNASVLDQNGLEHASPLASGGMFSNGGANVDRWASPFQSEVWILTINITSFRSDFICLKSFSDKGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="43815" e_stop="44404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43815" e_stop="44404" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43815" stop="44404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43816" stop="44317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307865" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGACCTGCACTCTGGGAATATCTATATCATAGTAAGAGGTTATACTGGGCATGTTATATTCCTCTTGTAAATGTGTTTGGCAATGGTGGATTGCATGGCCAAGGACATGTTAGACCTATAAGGAAATTCTTTTCTTTTCATATATCTTCTAAATATATCTTGGAAATGGCGGAGGATATGTCCAAAGACAAGTTTAACCTTCAAGCAGTAATTTTTTTTTTAATTATGACCAACAACCTAGGAGAGTCCTAACATTTATGAGATTTTTTTTACTGTTGTCTGCCTAAATTCTTCTCTCCTTCAATTAGGTTAGACCTTCTCCTCCTTCCTCCGTTTGGTTGTCATCTTCGGGACTTCTTTTAATAAAACGGTGTTGCTCCTAGTTGCTGTCTAGCATCACACCAAACCACTTAAATGGCAGGGTTTCTTATTTGTTATAGAAAATATTGTATATACCTTGATATTGAAGTTTGGCATCTTCAACTGCAAAAAAAGGTGCCTTAAAGTGACAGAATTAATGCCCCTCTAATTGTACCGTTGCGTCGTAGATTTTCTGCCCTATGCTTCCCATCTCTACTGTTCCCCGTGT</gDNA_template>
            <first_frame> W  T  C  T  L  G  I  S  I  S  *  *  E  V  I  L  G  M  L  Y  S  S  C  K  C  V  W  Q  W  W  I  A  W  P  R  T  C  *  T  Y  K  E  I  L  F  F  S  Y  I  F  *  I  Y  L  G  N  G  G  G  Y  V  Q  R  Q  V  *  P  S  S  S  N  F  F  F  N  Y  D  Q  Q  P  R  R  V  L  T  F  M  R  F  F  L  L  L  S  A  *  I  L  L  S  F  N  *  V  R  P  S  P  P  S  S  V  W  L  S  S  S  G  L  L  L  I  K  R  C  C  S  *  L  L  S  S  I  T  P  N  H  L  N  G  R  V  S  Y  L  L  *  K  I  L  Y  I  P  *  Y  *  S  L  A  S  S  T  A  K  K  G  A  L  K  *  Q  N  *  C  P  S  N  C  T  V  A  S  *  I  F  C  P  M  L  P  I  S  T  V  P  R   </first_frame>
            <second_frame>  G  P  A  L  W  E  Y  L  Y  H  S  K  R  L  Y  W  A  C  Y  I  P  L  V  N  V  F  G  N  G  G  L  H  G  Q  G  H  V  R  P  I  R  K  F  F  S  F  H  I  S  S  K  Y  I  L  E  M  A  E  D  M  S  K  D  K  F  N  L  Q  A  V  I  F  F  L  I  M  T  N  N  L  G  E  S  *  H  L  *  D  F  F  Y  C  C  L  P  K  F  F  S  P  S  I  R  L  D  L  L  L  L  P  P  F  G  C  H  L  R  D  F  F  *  *  N  G  V  A  P  S  C  C  L  A  S  H  Q  T  T  *  M  A  G  F  L  I  C  Y  R  K  Y  C  I  Y  L  D  I  E  V  W  H  L  Q  L  Q  K  K  V  P  *  S  D  R  I  N  A  P  L  I  V  P  L  R  R  R  F  S  A  L  C  F  P  S  L  L  F  P  V  </second_frame>
            <third_frame>   D  L  H  S  G  N  I  Y  I  I  V  R  G  Y  T  G  H  V  I  F  L  L  *  M  C  L  A  M  V  D  C  M  A  K  D  M  L  D  L  *  G  N  S  F  L  F  I  Y  L  L  N  I  S  W  K  W  R  R  I  C  P  K  T  S  L  T  F  K  Q  *  F  F  F  *  L  *  P  T  T  *  E  S  P  N  I  Y  E  I  F  F  T  V  V  C  L  N  S  S  L  L  Q  L  G  *  T  F  S  S  F  L  R  L  V  V  I  F  G  T  S  F  N  K  T  V  L  L  L  V  A  V  *  H  H  T  K  P  L  K  W  Q  G  F  L  F  V  I  E  N  I  V  Y  T  L  I  L  K  F  G  I  F  N  C  K  K  R  C  L  K  V  T  E  L  M  P  L  *  L  Y  R  C  V  V  D  F  L  P  Y  A  S  H  L  Y  C  S  P  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43816" stop="44067"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPALWEYLYHSKRLYWACYIPLVNVFGNGGLHGQGHVRPIRKFFSFHISSKYILEMAEDMSKDKFNLQAVIFFLIMTNNLGES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="41048" e_stop="41224"/>
            <exon e_start="42621" e_stop="42989"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.966"/>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="41048" e_stop="41224" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41225" i_stop="42620" i_length="1396"/>
          </intron>
          <exon e_serial="2" e_score="0.940">
            <gDNA_exon_boundary e_start="42621" e_stop="42989" e_length="369"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41048" stop="41224"/>
              <exon start="42621" stop="42989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41048" stop="41224"/>
              <exon start="42621" stop="42891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426987" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="9" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGACTCCTTTTTGGAAAGTGAAAAGTAGGTGAATCTGGCAGTCATCGGATTCTGTCGCCGCCGGTGAAGATGTCTTCCGGAAGATACATGGCCTACTCACCATCTCCGTCTGCTCCTCAGTCTCCTCATATCGCCGGACTTCGCTCTGCTTCCTCTGCCATCGCCGAGCAAGAGAA : GTATCTCTCAGAGTTACTTGCAGAACGCCACAAACTCGGCCCATTTGTGCCCGTCCTTCCTCATTGCTATCGATTGCTGAATCAGGGTGAGTAGGAAGTTGAATTTTGATTAGTTCAGCCACTTGTGCTTCTGATATCAAAAAGTTTGTTTTATTGCTCAACCTGAGAGAAATCAAAGATTAGAGAATGAGGTGAAAAATATTTTAAGTTGATGAGTACATTCTTTTCATCTGAACAAAGATGATAAATCCATTGTATACGTCTGTTTTTGCTAATTGGGTGGAAGTTTAGGTCAAGTTTGGATCTTCTATGTTAAGTCAGTCAGCACTTTTTTCTGGACGACTCCCAACACTTTTTGTATATTCCATG</gDNA_template>
            <first_frame> G  T  P  F  W  K  V  K  S  R  *  I  W  Q  S  S  D  S  V  A  A  G  E  D  V  F  R  K  I  H  G  L  L  T  I  S  V  C  S  S  V  S  S  Y  R  R  T  S  L  C  F  L  C  H  R  R  A  R  E  :  V  S  L  R  V  T  C  R  T  P  Q  T  R  P  I  C  A  R  P  S  S  L  L  S  I  A  E  S  G  *  V  G  S  *  I  L  I  S  S  A  T  C  A  S  D  I  K  K  F  V  L  L  L  N  L  R  E  I  K  D  *  R  M  R  *  K  I  F  *  V  D  E  Y  I  L  F  I  *  T  K  M  I  N  P  L  Y  T  S  V  F  A  N  W  V  E  V  *  V  K  F  G  S  S  M  L  S  Q  S  A  L  F  S  G  R  L  P  T  L  F  V  Y  S  M </first_frame>
            <second_frame>  G  L  L  F  G  K  *  K  V  G  E  S  G  S  H  R  I  L  S  P  P  V  K  M  S  S  G  R  Y  M  A  Y  S  P  S  P  S  A  P  Q  S  P  H  I  A  G  L  R  S  A  S  S  A  I  A  E  Q  E  K :   Y  L  S  E  L  L  A  E  R  H  K  L  G  P  F  V  P  V  L  P  H  C  Y  R  L  L  N  Q  G  E  *  E  V  E  F  *  L  V  Q  P  L  V  L  L  I  S  K  S  L  F  Y  C  S  T  *  E  K  S  K  I  R  E  *  G  E  K  Y  F  K  L  M  S  T  F  F  S  S  E  Q  R  *  *  I  H  C  I  R  L  F  L  L  I  G  W  K  F  R  S  S  L  D  L  L  C  *  V  S  Q  H  F  F  L  D  D  S  Q  H  F  L  Y  I  P   </second_frame>
            <third_frame>   D  S  F  L  E  S  E  K  *  V  N  L  A  V  I  G  F  C  R  R  R  *  R  C  L  P  E  D  T  W  P  T  H  H  L  R  L  L  L  S  L  L  I  S  P  D  F  A  L  L  P  L  P  S  P  S  K  R   : S  I  S  Q  S  Y  L  Q  N  A  T  N  S  A  H  L  C  P  S  F  L  I  A  I  D  C  *  I  R  V  S  R  K  L  N  F  D  *  F  S  H  L  C  F  *  Y  Q  K  V  C  F  I  A  Q  P  E  R  N  Q  R  L  E  N  E  V  K  N  I  L  S  *  *  V  H  S  F  H  L  N  K  D  D  K  S  I  V  Y  V  C  F  C  *  L  G  G  S  L  G  Q  V  W  I  F  Y  V  K  S  V  S  T  F  F  W  T  T  P  N  T  F  C  I  F  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41070" stop="41224"/>
                    <exon start="42621" stop="42714"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVGESGSHRILSPPVKMSSGRYMAYSPSPSAPQSPHIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCYRLLNQGE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="9" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41081" stop="41224"/>
                    <exon start="42621" stop="42710"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWQSSDSVAAGEDVFRKIHGLLTISVCSSVSSYRRTSLCFLCHRRAREVSLRVTCRTPQTRPICARPSSLLSIAESG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="47436" PGL_stop="46941"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47436" e_stop="46941"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="47436" e_stop="46941" e_length="496"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47436" stop="47141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586542" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47426" stop="46941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424299" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCGCTCGCATTACAGTCATTCCCACACCTTCAAATCACAAACTAGAAATTAATGGAATAATACAATGACGTTGGTAAGACACCGCTCTGACGACATCAAGCAAACCTCTAAGCGGTCCACAACTATGGCTTTACTGTTACTAAATCTTCCCTGACCGGAACATAAACACACTTCATATCATTATAGAGACAAGTTAGAACTGGCACAGAACAGCACCAGTGCCCCGATGGCAGTGCGAGGCATAAGACGTTATAGCAACATCGGTTGCATATAGGACCTGCTGGTTGGTTAGTGGTGTGTATCAATGCACAAGCTCCAAATCCCACTACACAAAGATCACACTCTGGTTTTAGCCCTCTTCATCCCAAGACTAAGACTGTTGTGGAAGGGGGAAACAGAACCAGACATTTGAGAACCTTCTTCACGAAGAGTACCATTCAGCATTGCAAGTTCACGCAACTGCTGTTTTTTGTAGAAATCCTGTGACTCATCCTG</gDNA_template>
            <first_frame> L  A  R  I  T  V  I  P  T  P  S  N  H  K  L  E  I  N  G  I  I  Q  *  R  W  *  D  T  A  L  T  T  S  S  K  P  L  S  G  P  Q  L  W  L  Y  C  Y  *  I  F  P  D  R  N  I  N  T  L  H  I  I  I  E  T  S  *  N  W  H  R  T  A  P  V  P  R  W  Q  C  E  A  *  D  V  I  A  T  S  V  A  Y  R  T  C  W  L  V  S  G  V  Y  Q  C  T  S  S  K  S  H  Y  T  K  I  T  L  W  F  *  P  S  S  S  Q  D  *  D  C  C  G  R  G  K  Q  N  Q  T  F  E  N  L  L  H  E  E  Y  H  S  A  L  Q  V  H  A  T  A  V  F  C  R  N  P  V  T  H  P  </first_frame>
            <second_frame>  S  L  A  L  Q  S  F  P  H  L  Q  I  T  N  *  K  L  M  E  *  Y  N  D  V  G  K  T  P  L  *  R  H  Q  A  N  L  *  A  V  H  N  Y  G  F  T  V  T  K  S  S  L  T  G  T  *  T  H  F  I  S  L  *  R  Q  V  R  T  G  T  E  Q  H  Q  C  P  D  G  S  A  R  H  K  T  L  *  Q  H  R  L  H  I  G  P  A  G  W  L  V  V  C  I  N  A  Q  A  P  N  P  T  T  Q  R  S  H  S  G  F  S  P  L  H  P  K  T  K  T  V  V  E  G  G  N  R  T  R  H  L  R  T  F  F  T  K  S  T  I  Q  H  C  K  F  T  Q  L  L  F  F  V  E  I  L  *  L  I  L </second_frame>
            <third_frame>   R  S  H  Y  S  H  S  H  T  F  K  S  Q  T  R  N  *  W  N  N  T  M  T  L  V  R  H  R  S  D  D  I  K  Q  T  S  K  R  S  T  T  M  A  L  L  L  L  N  L  P  *  P  E  H  K  H  T  S  Y  H  Y  R  D  K  L  E  L  A  Q  N  S  T  S  A  P  M  A  V  R  G  I  R  R  Y  S  N  I  G  C  I  *  D  L  L  V  G  *  W  C  V  S  M  H  K  L  Q  I  P  L  H  K  D  H  T  L  V  L  A  L  F  I  P  R  L  R  L  L  W  K  G  E  T  E  P  D  I  *  E  P  S  S  R  R  V  P  F  S  I  A  S  S  R  N  C  C  F  L  *  K  S  C  D  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47180" stop="46950"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QHRLHIGPAGWLVVCINAQAPNPTTQRSHSGFSPLHPKTKTVVEGGNRTRHLRTFFTKSTIQHCKFTQLLFFVEIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="48216" PGL_stop="53403"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48216" e_stop="48260"/>
            <exon e_start="49428" e_stop="49519"/>
            <exon e_start="49917" e_stop="50044"/>
            <exon e_start="50824" e_stop="50928"/>
            <exon e_start="51019" e_stop="51346"/>
            <exon e_start="52406" e_stop="52452"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.926" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.617"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48216" e_stop="48260" e_length="45"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="48261" i_stop="49427" i_length="1167"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49428" e_stop="49519" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49917" e_stop="50044" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50824" e_stop="50928" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.926">
            <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51019" e_stop="51346" e_length="328"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="51347" i_stop="52405" i_length="1059"/>
          </intron>
          <exon e_serial="6" e_score="0.617">
            <gDNA_exon_boundary e_start="52406" e_stop="52452" e_length="47"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48216" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48218" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51346"/>
              <exon start="52406" stop="52452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48225" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48235" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48235" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48236" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48236" stop="48260"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49479" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49993" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTTTGCAGCCTCCATCAAAAACTCTCTTCTCTCGAAAGAAAAAG : TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG : GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG : GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG : GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACAT : CGCATCAAATAATTAAATAAAAAAGAATCAACCTAAAAACGAAAATA</gDNA_template>
            <first_frame> S  L  Q  P  P  S  K  T  L  F  S  R  K  K  K  :  *  *  V  S  Q  I  R  Y  G  F  K  E  D  S  E  G  I  E  G  L  A  E  R  P  P  C  F  L  Q  C  R :   P  C  R  S  G  Y  V  P  L  A  S  Y  H  N  G  S  I  *  Q  S  V  F  W  G  C  F  P  C  I  Y  P  F  P  S  R  L  S  F  Q  A  P  K   : G  L  F  Q  N  Q  G  F  P  P  K  H  Q  Q  *  W  *  Y  L  S  *  Y  P  K  G  T  M  E  P  C  S  Y  C  I  Q   : G  A  A  F  Y  L  L  F  A  Y  *  S  Q  S  R  *  S  F  S  A  R  D  C  S  H  V  Q  D  G  *  T  E  V  *  E  Y  C  Q  I  M  D  P  E  I  R  N  G  L  N  T  S  V  S  T  F  M  N  I  I  E  P  L  F  Y  S  S  K  *  T  *  A  W  C  T  I  Y  R  Y  W  C  F  L  F  S  G  I  L  P  F  K  F  L  T  G  *  R  F  I  I  W  *  N  L  R  Y  V  F  V  D  I :   A  S  N  N  *  I  K  K  N  Q  P  K  N  E  N  </first_frame>
            <second_frame>  V  C  S  L  H  Q  K  L  S  S  L  E  R  K  S :   D  K  S  R  K  F  V  M  A  S  K  R  I  Q  K  E  L  K  D  L  Q  K  D  P  P  A  S  C  S  A   : G  P  V  G  Q  D  M  F  H  W  Q  A  T  I  M  G  P  S  D  S  P  F  S  G  G  V  F  L  A  S  I  H  F  P  P  D  Y  P  F  K  P  P  K  :  V  S  F  K  T  K  V  F  H  P  N  I  N  S  N  G  S  I  C  L  D  I  L  K  E  Q  W  S  P  A  L  T  V  S  K  :  V  L  L  S  I  C  S  L  L  T  D  P  N  P  D  D  P  L  V  P  E  I  A  H  M  Y  K  T  D  R  P  K  Y  E  S  T  A  R  S  W  T  Q  K  Y  A  M  G  *  T  H  L  F  L  L  S  *  I  S  S  N  L  Y  S  I  V  V  N  K  L  R  H  G  A  Q  F  I  D  I  G  V  S  C  F  L  V  Y  C  L  L  S  F  *  L  V  N  D  L  S  F  G  E  T  *  D  M  F  L  L  T   : S  H  Q  I  I  K  *  K  R  I  N  L  K  T  K  I </second_frame>
            <third_frame>   F  A  A  S  I  K  N  S  L  L  S  K  E  K   : V  I  S  L  A  N  S  L  W  L  Q  R  G  F  R  R  N  *  R  T  C  R  K  T  P  L  L  P  A  V  Q  :  A  L  *  V  R  I  C  S  I  G  K  L  P  *  W  V  H  L  T  V  R  F  L  G  V  F  S  L  H  L  S  I  S  L  Q  I  I  L  S  S  P  Q  R :   S  L  S  K  P  R  F  S  T  Q  T  S  T  V  M  V  V  F  V  L  I  S  *  R  N  N  G  A  L  L  L  L  Y  P  R :   C  C  F  L  F  A  L  C  L  L  I  P  I  Q  M  I  L  *  C  Q  R  L  L  T  C  T  R  R  I  D  R  S  M  R  V  L  P  D  H  G  P  R  N  T  Q  W  V  E  H  I  C  F  Y  F  H  E  Y  H  R  T  F  I  L  *  *  *  I  N  L  G  M  V  H  N  L  *  I  L  V  F  L  V  F  W  Y  I  A  F  *  V  F  D  W  L  T  I  Y  H  L  V  K  L  K  I  C  F  C  *  H  :  R  I  K  *  L  N  K  K  E  S  T  *  K  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48217" stop="48260"/>
                    <exon start="49428" stop="49519"/>
                    <exon start="49917" stop="50044"/>
                    <exon start="50824" stop="50928"/>
                    <exon start="51019" stop="51162"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VCSLHQKLSSLERKSDKSRKFVMASKRIQKELKDLQKDPPASCSAGPVGQDMFHWQATIMGPSDSPFSGGVFLASIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTARSWTQKYAMG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="49278" e_stop="49301"/>
            <exon e_start="49428" e_stop="49519"/>
            <exon e_start="49917" e_stop="50044"/>
            <exon e_start="50824" e_stop="50928"/>
            <exon e_start="51019" e_stop="51351"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.789" acc_prob="0.997" e_score="0.667"/>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="0.978"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.945"/>
          <exon-intron don_prob="0.999" acc_prob="0.926" e_score="1.000"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.667">
            <gDNA_exon_boundary e_start="49278" e_stop="49301" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.789" acc_prob="0.997">
            <gDNA_intron_boundary i_start="49302" i_stop="49427" i_length="126"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="49428" e_stop="49519" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397"/>
          </intron>
          <exon e_serial="3" e_score="0.945">
            <gDNA_exon_boundary e_start="49917" e_stop="50044" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50824" e_stop="50928" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.926">
            <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="0.925">
            <gDNA_exon_boundary e_start="51019" e_stop="51351" e_length="333"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49278" stop="49301"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49281" stop="49301"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49479" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49993" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAACGCTTTTACCTTGAAAAAAA : TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG : GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG : GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG : GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACATGTGAA</gDNA_template>
            <first_frame> A  T  L  L  P  *  K  K  :  *  *  V  S  Q  I  R  Y  G  F  K  E  D  S  E  G  I  E  G  L  A  E  R  P  P  C  F  L  Q  C  R :   P  C  R  S  G  Y  V  P  L  A  S  Y  H  N  G  S  I  *  Q  S  V  F  W  G  C  F  P  C  I  Y  P  F  P  S  R  L  S  F  Q  A  P  K   : G  L  F  Q  N  Q  G  F  P  P  K  H  Q  Q  *  W  *  Y  L  S  *  Y  P  K  G  T  M  E  P  C  S  Y  C  I  Q   : G  A  A  F  Y  L  L  F  A  Y  *  S  Q  S  R  *  S  F  S  A  R  D  C  S  H  V  Q  D  G  *  T  E  V  *  E  Y  C  Q  I  M  D  P  E  I  R  N  G  L  N  T  S  V  S  T  F  M  N  I  I  E  P  L  F  Y  S  S  K  *  T  *  A  W  C  T  I  Y  R  Y  W  C  F  L  F  S  G  I  L  P  F  K  F  L  T  G  *  R  F  I  I  W  *  N  L  R  Y  V  F  V  D  M  *  </first_frame>
            <second_frame>  Q  R  F  Y  L  E  K  N :   D  K  S  R  K  F  V  M  A  S  K  R  I  Q  K  E  L  K  D  L  Q  K  D  P  P  A  S  C  S  A   : G  P  V  G  Q  D  M  F  H  W  Q  A  T  I  M  G  P  S  D  S  P  F  S  G  G  V  F  L  A  S  I  H  F  P  P  D  Y  P  F  K  P  P  K  :  V  S  F  K  T  K  V  F  H  P  N  I  N  S  N  G  S  I  C  L  D  I  L  K  E  Q  W  S  P  A  L  T  V  S  K  :  V  L  L  S  I  C  S  L  L  T  D  P  N  P  D  D  P  L  V  P  E  I  A  H  M  Y  K  T  D  R  P  K  Y  E  S  T  A  R  S  W  T  Q  K  Y  A  M  G  *  T  H  L  F  L  L  S  *  I  S  S  N  L  Y  S  I  V  V  N  K  L  R  H  G  A  Q  F  I  D  I  G  V  S  C  F  L  V  Y  C  L  L  S  F  *  L  V  N  D  L  S  F  G  E  T  *  D  M  F  L  L  T  C  E </second_frame>
            <third_frame>   N  A  F  T  L  K  K   : M  I  S  L  A  N  S  L  W  L  Q  R  G  F  R  R  N  *  R  T  C  R  K  T  P  L  L  P  A  V  Q  :  A  L  *  V  R  I  C  S  I  G  K  L  P  *  W  V  H  L  T  V  R  F  L  G  V  F  S  L  H  L  S  I  S  L  Q  I  I  L  S  S  P  Q  R :   S  L  S  K  P  R  F  S  T  Q  T  S  T  V  M  V  V  F  V  L  I  S  *  R  N  N  G  A  L  L  L  L  Y  P  R :   C  C  F  L  F  A  L  C  L  L  I  P  I  Q  M  I  L  *  C  Q  R  L  L  T  C  T  R  R  I  D  R  S  M  R  V  L  P  D  H  G  P  R  N  T  Q  W  V  E  H  I  C  F  Y  F  H  E  Y  H  R  T  F  I  L  *  *  *  I  N  L  G  M  V  H  N  L  *  I  L  V  F  L  V  F  W  Y  I  A  F  *  V  F  D  W  L  T  I  Y  H  L  V  K  L  K  I  C  F  C  *  H  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49279" stop="49301"/>
                    <exon start="49428" stop="49519"/>
                    <exon start="49917" stop="50044"/>
                    <exon start="50824" stop="50928"/>
                    <exon start="51019" stop="51162"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRFYLEKNDKSRKFVMASKRIQKELKDLQKDPPASCSAGPVGQDMFHWQATIMGPSDSPFSGGVFLASIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTARSWTQKYAMG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="49279" e_stop="49303"/>
            <exon e_start="49428" e_stop="49519"/>
            <exon e_start="49917" e_stop="50044"/>
            <exon e_start="50824" e_stop="50928"/>
            <exon e_start="51019" e_stop="51351"/>
            <exon e_start="53379" e_stop="53403"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="0.760"/>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="0.978"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.938"/>
          <exon-intron don_prob="0.999" acc_prob="0.926" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.208" e_score="0.925"/>
          <exon-only e_score="0.720"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.760">
            <gDNA_exon_boundary e_start="49279" e_stop="49303" e_length="25"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="49304" i_stop="49427" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="49428" e_stop="49519" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="49520" i_stop="49916" i_length="397"/>
          </intron>
          <exon e_serial="3" e_score="0.938">
            <gDNA_exon_boundary e_start="49917" e_stop="50044" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="50045" i_stop="50823" i_length="779"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50824" e_stop="50928" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.926">
            <gDNA_intron_boundary i_start="50929" i_stop="51018" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="0.925">
            <gDNA_exon_boundary e_start="51019" e_stop="51351" e_length="333"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.208">
            <gDNA_intron_boundary i_start="51352" i_stop="53378" i_length="2027"/>
          </intron>
          <exon e_serial="6" e_score="0.720">
            <gDNA_exon_boundary e_start="53379" e_stop="53403" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49279" stop="49303"/>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51351"/>
              <exon start="53379" stop="53403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429818" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49428" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49479" stop="49519"/>
              <exon start="49917" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E580843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49993" stop="50044"/>
              <exon start="50824" stop="50928"/>
              <exon start="51019" stop="51069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACGCTTTTACCTTGAAAAAAAGT : TGATAAGTCTCGCAAATTCGTTATGGCTTCAAAGAGGATTCAGAAGGAATTGAAGGACTTGCAGAAAGACCCCCCTGCTTCCTGCAGTGCAG : GCCCTGTAGGTCAGGATATGTTCCATTGGCAAGCTACCATAATGGGTCCATCTGACAGTCCGTTTTCTGGGGGTGTTTTCCTTGCATCTATCCATTTCCCTCCAGATTATCCTTTCAAGCCCCCAAAG : GTCTCTTTCAAAACCAAGGTTTTCCACCCAAACATCAACAGTAATGGTAGTATTTGTCTTGATATCCTAAAGGAACAATGGAGCCCTGCTCTTACTGTATCCAAG : GTGCTGCTTTCTATTTGCTCTTTGCTTACTGATCCCAATCCAGATGATCCTTTAGTGCCAGAGATTGCTCACATGTACAAGACGGATAGACCGAAGTATGAGAGTACTGCCAGATCATGGACCCAGAAATACGCAATGGGTTGAACACATCTGTTTCTACTTTCATGAATATCATCGAACCTTTATTCTATAGTAGTAAATAAACTTAGGCATGGTGCACAATTTATAGATATTGGTGTTTCTTGTTTTCTGGTATATTGCCTTTTAAGTTTTTGACTGGTTAACGATTTATCATTTGGTGAAACTTAAGATATGTTTTTGTTGACATGTGAA : AACAAACAATAAAAATATAGATAAA</gDNA_template>
            <first_frame> Q  R  F  Y  L  E  K  K   : L  I  S  L  A  N  S  L  W  L  Q  R  G  F  R  R  N  *  R  T  C  R  K  T  P  L  L  P  A  V  Q  :  A  L  *  V  R  I  C  S  I  G  K  L  P  *  W  V  H  L  T  V  R  F  L  G  V  F  S  L  H  L  S  I  S  L  Q  I  I  L  S  S  P  Q  R :   S  L  S  K  P  R  F  S  T  Q  T  S  T  V  M  V  V  F  V  L  I  S  *  R  N  N  G  A  L  L  L  L  Y  P  R :   C  C  F  L  F  A  L  C  L  L  I  P  I  Q  M  I  L  *  C  Q  R  L  L  T  C  T  R  R  I  D  R  S  M  R  V  L  P  D  H  G  P  R  N  T  Q  W  V  E  H  I  C  F  Y  F  H  E  Y  H  R  T  F  I  L  *  *  *  I  N  L  G  M  V  H  N  L  *  I  L  V  F  L  V  F  W  Y  I  A  F  *  V  F  D  W  L  T  I  Y  H  L  V  K  L  K  I  C  F  C  *  H  V  K :   T  N  N  K  N  I  D  K </first_frame>
            <second_frame>  N  A  F  T  L  K  K  S  :  *  *  V  S  Q  I  R  Y  G  F  K  E  D  S  E  G  I  E  G  L  A  E  R  P  P  C  F  L  Q  C  R :   P  C  R  S  G  Y  V  P  L  A  S  Y  H  N  G  S  I  *  Q  S  V  F  W  G  C  F  P  C  I  Y  P  F  P  S  R  L  S  F  Q  A  P  K   : G  L  F  Q  N  Q  G  F  P  P  K  H  Q  Q  *  W  *  Y  L  S  *  Y  P  K  G  T  M  E  P  C  S  Y  C  I  Q   : G  A  A  F  Y  L  L  F  A  Y  *  S  Q  S  R  *  S  F  S  A  R  D  C  S  H  V  Q  D  G  *  T  E  V  *  E  Y  C  Q  I  M  D  P  E  I  R  N  G  L  N  T  S  V  S  T  F  M  N  I  I  E  P  L  F  Y  S  S  K  *  T  *  A  W  C  T  I  Y  R  Y  W  C  F  L  F  S  G  I  L  P  F  K  F  L  T  G  *  R  F  I  I  W  *  N  L  R  Y  V  F  V  D  M  *   : K  Q  T  I  K  I  *  I   </second_frame>
            <third_frame>   T  L  L  P  *  K  K  V :   D  K  S  R  K  F  V  M  A  S  K  R  I  Q  K  E  L  K  D  L  Q  K  D  P  P  A  S  C  S  A   : G  P  V  G  Q  D  M  F  H  W  Q  A  T  I  M  G  P  S  D  S  P  F  S  G  G  V  F  L  A  S  I  H  F  P  P  D  Y  P  F  K  P  P  K  :  V  S  F  K  T  K  V  F  H  P  N  I  N  S  N  G  S  I  C  L  D  I  L  K  E  Q  W  S  P  A  L  T  V  S  K  :  V  L  L  S  I  C  S  L  L  T  D  P  N  P  D  D  P  L  V  P  E  I  A  H  M  Y  K  T  D  R  P  K  Y  E  S  T  A  R  S  W  T  Q  K  Y  A  M  G  *  T  H  L  F  L  L  S  *  I  S  S  N  L  Y  S  I  V  V  N  K  L  R  H  G  A  Q  F  I  D  I  G  V  S  C  F  L  V  Y  C  L  L  S  F  *  L  V  N  D  L  S  F  G  E  T  *  D  M  F  L  L  T  C  E  :  N  K  Q  *  K  Y  R  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49296" stop="49303"/>
                    <exon start="49428" stop="49519"/>
                    <exon start="49917" stop="50044"/>
                    <exon start="50824" stop="50928"/>
                    <exon start="51019" stop="51162"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>474</number_coding_nucleotides>
                  <number_encoded_amino_acids>158</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKVDKSRKFVMASKRIQKELKDLQKDPPASCSAGPVGQDMFHWQATIMGPSDSPFSGGVFLASIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRPKYESTARSWTQKYAMG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="57646" PGL_stop="63889"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57646" e_stop="57988"/>
            <exon e_start="58874" e_stop="58986"/>
            <exon e_start="59094" e_stop="59391"/>
            <exon e_start="59659" e_stop="59758"/>
            <exon e_start="59848" e_stop="60114"/>
            <exon e_start="60608" e_stop="60685"/>
            <exon e_start="60788" e_stop="60892"/>
            <exon e_start="60999" e_stop="61048"/>
            <exon e_start="61143" e_stop="61242"/>
            <exon e_start="61359" e_stop="61457"/>
            <exon e_start="61540" e_stop="61653"/>
            <exon e_start="61758" e_stop="61917"/>
            <exon e_start="62707" e_stop="63095"/>
            <exon e_start="63206" e_stop="63280"/>
            <exon e_start="63622" e_stop="63889"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.773" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.863" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.828" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.866" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.533" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.747" acc_prob="0.999" e_score="0.992"/>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57646" e_stop="57988" e_length="343"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.773">
            <gDNA_intron_boundary i_start="57989" i_stop="58873" i_length="885"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58874" e_stop="58986" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.866" acc_prob="0.948">
            <gDNA_intron_boundary i_start="58987" i_stop="59093" i_length="107"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="59094" e_stop="59391" e_length="298"/>
          </exon>
          <intron i_serial="3" don_prob="0.863" acc_prob="0.980">
            <gDNA_intron_boundary i_start="59392" i_stop="59658" i_length="267"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="59659" e_stop="59758" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="59759" i_stop="59847" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59848" e_stop="60114" e_length="267"/>
          </exon>
          <intron i_serial="5" don_prob="0.828" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60115" i_stop="60607" i_length="493"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="60608" e_stop="60685" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.963" acc_prob="0.995">
            <gDNA_intron_boundary i_start="60686" i_stop="60787" i_length="102"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="60788" e_stop="60892" e_length="105"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="60893" i_stop="60998" i_length="106"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="60999" e_stop="61048" e_length="50"/>
          </exon>
          <intron i_serial="8" don_prob="0.943" acc_prob="0.000">
            <gDNA_intron_boundary i_start="61049" i_stop="61142" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="61143" e_stop="61242" e_length="100"/>
          </exon>
          <intron i_serial="9" don_prob="0.991" acc_prob="0.866">
            <gDNA_intron_boundary i_start="61243" i_stop="61358" i_length="116"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="61359" e_stop="61457" e_length="99"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61458" i_stop="61539" i_length="82"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="61540" e_stop="61653" e_length="114"/>
          </exon>
          <intron i_serial="11" don_prob="0.533" acc_prob="0.969">
            <gDNA_intron_boundary i_start="61654" i_stop="61757" i_length="104"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="61758" e_stop="61917" e_length="160"/>
          </exon>
          <intron i_serial="12" don_prob="0.985" acc_prob="0.995">
            <gDNA_intron_boundary i_start="61918" i_stop="62706" i_length="789"/>
          </intron>
          <exon e_serial="13" e_score="0.992">
            <gDNA_exon_boundary e_start="62707" e_stop="63095" e_length="389"/>
          </exon>
          <intron i_serial="13" don_prob="0.747" acc_prob="0.999">
            <gDNA_intron_boundary i_start="63096" i_stop="63205" i_length="110"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="63206" e_stop="63280" e_length="75"/>
          </exon>
          <intron i_serial="14" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="63281" i_stop="63621" i_length="341"/>
          </intron>
          <exon e_serial="15" e_score="0.978">
            <gDNA_exon_boundary e_start="63622" e_stop="63889" e_length="268"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57646" stop="57988"/>
              <exon start="58874" stop="58986"/>
              <exon start="59094" stop="59391"/>
              <exon start="59659" stop="59758"/>
              <exon start="59848" stop="60114"/>
              <exon start="60608" stop="60685"/>
              <exon start="60788" stop="60892"/>
              <exon start="60999" stop="61048"/>
              <exon start="61143" stop="61242"/>
              <exon start="61359" stop="61457"/>
              <exon start="61540" stop="61653"/>
              <exon start="61758" stop="61917"/>
              <exon start="62707" stop="62981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57655" stop="57988"/>
              <exon start="58874" stop="58986"/>
              <exon start="59094" stop="59117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57655" stop="57981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58983" stop="58986"/>
              <exon start="59094" stop="59391"/>
              <exon start="59659" stop="59758"/>
              <exon start="59848" stop="60114"/>
              <exon start="60608" stop="60685"/>
              <exon start="60788" stop="60858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58983" stop="58986"/>
              <exon start="59094" stop="59391"/>
              <exon start="59659" stop="59758"/>
              <exon start="59848" stop="60102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58983" stop="58986"/>
              <exon start="59094" stop="59391"/>
              <exon start="59659" stop="59758"/>
              <exon start="59848" stop="60102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59094" stop="59391"/>
              <exon start="59659" stop="59758"/>
              <exon start="59848" stop="60114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61167" stop="61242"/>
              <exon start="61359" stop="61457"/>
              <exon start="61540" stop="61653"/>
              <exon start="61758" stop="61917"/>
              <exon start="62707" stop="63095"/>
              <exon start="63206" stop="63213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62722" stop="63095"/>
              <exon start="63206" stop="63280"/>
              <exon start="63622" stop="63769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62857" stop="63095"/>
              <exon start="63206" stop="63280"/>
              <exon start="63622" stop="63889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369548" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGAGTGAGAGACAGAAAAAGATACTCTCTCCGCATCTATACATATAGAGAGGGAAAACCTATATTTATAGAGAGAGAAACTCTAGAGAGAGAAAAAGCCATGTATGTGTATATATAGGCTATATAGATTACAGTGAAAAAAACTTTCTTTTTCATTCCTCCATTATTCGTTCATTCTCTCAGCTCAAAGACCACAGAATTTTCAAGAAATTTATGACGTTTTGAAGTTAAAGTTTTGGTTTTTTTCCAGATTTTTCTCGGAATTTATGATTTCAGAGAAAAAAAATCAATGCAAAAGCTCCGTTTAATGGTCGATTTAGCTTGCGTTTTGTTAGGGTTCAG : TAGTGAAACTTGAGCTCGGATGGTTTTCCTGCGGAACAGCATAGATTGCTTTAAACGTTAAGAGCCACATTTCCTTCGTTATTCTTACATCCTCTTTGTTGGAAGGATGTCAG : AATGGTTGGATGCATATGATGACGTAAGAGAAAGAAGATCAGACTTCGAGGTTTCAGAGGATGAAAGACGACGTTCACGAATTGGTACTTTCAAGAAAAAGGCATTACATGCTTCAAACAAGTTCACCCACTCTCTGAAGAAAAGAGGAAAAAGGAAAGTGGACTACAGGTTCCCTTCAGTTTCAATAGAGGATGTACGTGATGCAAAAGAGGAGAATGCTGTCTGTGAATTGCGTCAAAGGCTGCTAGAGCGGAATTTGTTGCCATCCATACATGATGACTACCATACATTGTTGAG : ATTCTTAAAGGCAAGAGATCTCAATGTTGAGAAAACTATTCCGATGTGGGAAGAAATGCTTAACTGGAGGAAAGAGTTTGGAGCAGACACAATATTGCAG : GATTTTGACTTTGACGAGTTAGAAGAAGTATTGCAGTTTTACCCACAAGGATATCATGGGGTTGATAGGGAGGGAAGACCTGTTTATATCGAAAGGCTTGGACAAGCTAATCCGAACAAACTAATGCGGATAACCACAATTGATCGCTACATAAAATATCATGTCCAAGAATTTGAAAGGGCACTACATGAGAAGTTCCCTGCATGTTCTGTTGCTGCAAAGAAAAGAATCTGCACAACAACTACAATTTTGGATGTGCAAGGCTTA : GGGATTAAGAATTTCACAAGGACAGCTGCTAGTCTTTTGGCGGCCATGGCAAAAATTGATAATAGCTATTATCCTGAG : ACACTGCATCGGATGTTCATTGTCAATGCTGGCCCTGGCTTCAAAAAGATGCTCTGGCCAGCAGCTCAAAAATTTCTGGATGCAAAGACTATTGCAAAGATACAG : GTGCTCGATCCCAAATCCTTGGGTAAACTACATGAAGTTATTGACCCAAG : TCAATTGCCTGACTTTTTAGGTGGCTCTTGTACCTGTTCTGACGAGGGTGGTTGCCTCAGGTCTAACAAGGGTCCATGGAGTGATCCTGAAGTAATGAAG : CTTGTCTATAATGTAGAGGCAACAACTGTGAAGGAAATCTCTAGAAAACTTGGTGACCAAAGGAAAATTGAATCCTATATACAAATACGCCCTTCAAAG : GGAAGGAGCAGAGACACATCCACAAGTGATTCAGTATCGGATGCTGCTGACTTGTGTTCACCAATTAGAGGAAATAGTAGCTCAATTTTGAGGCTGACCCCAGTAGATGAAGAA : GCTAGGTCATCAGATTCAACAGCCTATTGTAGCTGTGATGATGAATTCAGCCTGGGTGATCGAGGTGTCACTAATGAGCATGGATTGCTGCATTGGCAAGAGCAGTCTCCTGTGAGCAGTCCAATGAATCGGTCCACTAATACATTGCCTCATTCTGGAG : GTACCTGGGCAATAAATTGGTGTGAAAGAATCCAAGAGAAGATTCTGAGCAGCTGTTTCAGTTGTTTGGAAAGGAAACTGATTCCTTTCATACTTAAACTCTTTGCATTTATTCGTAGTCTTCCCTTCGAGTACTGGAGGAAACGGACAAATGTTTTTCCGACTAATGCATTGGAAGAACGACAAGGGAGCAGTTCATCCATTAATGATGAAGCAGTTCAAAGAGTAAGGGAGATCCATCCATGCATGCAGCGTCTTCATAAATTGGAAAATTTATTGGAAGAAATAAACAAAAAGCCCGCTGAGATCCCAGCAGAGAAGGATCGAATGCTTCATCAGTCACTTAACAGGATCAAGTCTGTAGAAGTTGACCTAGAAAAAACAAAAAGG : GTATTGCATGCGACGGTATTGAAGCAACTTGAAATTACAGAGTTATTGGACAACCTAAAAGAGTCGAGCTTTCAT : AGGCGGAGATTGTGGTGTTGAATATTGTAAGGTTGGAGATTTGAGTACCAGGACAACGCGATGATAACCTTTTACTGCTAACTATGCTGCGAAGGGAGATGTTAGCTTATGCACCTCCAGCAGTGGTGACAAAGTTTTCCTTTTTTTTTTTTTTGTACAATGTCCTTTACAGAACATGCAGTTGTTACTGCAAGATGATGTTTGATTATACTGTACTGTTAAACATCTTGAAGAAAAGCTTAAAAGAAAGCCCTTTGAGGGTTTAGAG</gDNA_template>
            <first_frame> V  E  *  E  T  E  K  D  T  L  S  A  S  I  H  I  E  R  E  N  L  Y  L  *  R  E  K  L  *  R  E  K  K  P  C  M  C  I  Y  R  L  Y  R  L  Q  *  K  K  L  S  F  S  F  L  H  Y  S  F  I  L  S  A  Q  R  P  Q  N  F  Q  E  I  Y  D  V  L  K  L  K  F  W  F  F  S  R  F  F  S  E  F  M  I  S  E  K  K  N  Q  C  K  S  S  V  *  W  S  I  *  L  A  F  C  *  G  S   : V  V  K  L  E  L  G  W  F  S  C  G  T  A  *  I  A  L  N  V  K  S  H  I  S  F  V  I  L  T  S  S  L  L  E  G  C  Q  :  N  G  W  M  H  M  M  T  *  E  K  E  D  Q  T  S  R  F  Q  R  M  K  D  D  V  H  E  L  V  L  S  R  K  R  H  Y  M  L  Q  T  S  S  P  T  L  *  R  K  E  E  K  G  K  W  T  T  G  S  L  Q  F  Q  *  R  M  Y  V  M  Q  K  R  R  M  L  S  V  N  C  V  K  G  C  *  S  G  I  C  C  H  P  Y  M  M  T  T  I  H  C  *   : D  S  *  R  Q  E  I  S  M  L  R  K  L  F  R  C  G  K  K  C  L  T  G  G  K  S  L  E  Q  T  Q  Y  C  R :   I  L  T  L  T  S  *  K  K  Y  C  S  F  T  H  K  D  I  M  G  L  I  G  R  E  D  L  F  I  S  K  G  L  D  K  L  I  R  T  N  *  C  G  *  P  Q  L  I  A  T  *  N  I  M  S  K  N  L  K  G  H  Y  M  R  S  S  L  H  V  L  L  L  Q  R  K  E  S  A  Q  Q  L  Q  F  W  M  C  K  A  * :   G  L  R  I  S  Q  G  Q  L  L  V  F  W  R  P  W  Q  K  L  I  I  A  I  I  L  R :   H  C  I  G  C  S  L  S  M  L  A  L  A  S  K  R  C  S  G  Q  Q  L  K  N  F  W  M  Q  R  L  L  Q  R  Y  R :   C  S  I  P  N  P  W  V  N  Y  M  K  L  L  T  Q   : V  N  C  L  T  F  *  V  A  L  V  P  V  L  T  R  V  V  A  S  G  L  T  R  V  H  G  V  I  L  K  *  *  S :   L  S  I  M  *  R  Q  Q  L  *  R  K  S  L  E  N  L  V  T  K  G  K  L  N  P  I  Y  K  Y  A  L  Q  R :   E  G  A  E  T  H  P  Q  V  I  Q  Y  R  M  L  L  T  C  V  H  Q  L  E  E  I  V  A  Q  F  *  G  *  P  Q  *  M  K  K :   L  G  H  Q  I  Q  Q  P  I  V  A  V  M  M  N  S  A  W  V  I  E  V  S  L  M  S  M  D  C  C  I  G  K  S  S  L  L  *  A  V  Q  *  I  G  P  L  I  H  C  L  I  L  E  :  V  P  G  Q  *  I  G  V  K  E  S  K  R  R  F  *  A  A  V  S  V  V  W  K  G  N  *  F  L  S  Y  L  N  S  L  H  L  F  V  V  F  P  S  S  T  G  G  N  G  Q  M  F  F  R  L  M  H  W  K  N  D  K  G  A  V  H  P  L  M  M  K  Q  F  K  E  *  G  R  S  I  H  A  C  S  V  F  I  N  W  K  I  Y  W  K  K  *  T  K  S  P  L  R  S  Q  Q  R  R  I  E  C  F  I  S  H  L  T  G  S  S  L  *  K  L  T  *  K  K  Q  K  G :   Y  C  M  R  R  Y  *  S  N  L  K  L  Q  S  Y  W  T  T  *  K  S  R  A  F  I :   G  G  D  C  G  V  E  Y  C  K  V  G  D  L  S  T  R  T  T  R  *  *  P  F  T  A  N  Y  A  A  K  G  D  V  S  L  C  T  S  S  S  G  D  K  V  F  L  F  F  F  F  V  Q  C  P  L  Q  N  M  Q  L  L  L  Q  D  D  V  *  L  Y  C  T  V  K  H  L  E  E  K  L  K  R  K  P  F  E  G  L  E </first_frame>
            <second_frame>  L  S  E  R  Q  K  K  I  L  S  P  H  L  Y  I  *  R  G  K  T  Y  I  Y  R  E  R  N  S  R  E  R  K  S  H  V  C  V  Y  I  G  Y  I  D  Y  S  E  K  N  F  L  F  H  S  S  I  I  R  S  F  S  Q  L  K  D  H  R  I  F  K  K  F  M  T  F  *  S  *  S  F  G  F  F  P  D  F  S  R  N  L  *  F  Q  R  K  K  I  N  A  K  A  P  F  N  G  R  F  S  L  R  F  V  R  V  Q  :  *  *  N  L  S  S  D  G  F  P  A  E  Q  H  R  L  L  *  T  L  R  A  T  F  P  S  L  F  L  H  P  L  C  W  K  D  V  R :   M  V  G  C  I  *  *  R  K  R  K  K  I  R  L  R  G  F  R  G  *  K  T  T  F  T  N  W  Y  F  Q  E  K  G  I  T  C  F  K  Q  V  H  P  L  S  E  E  K  R  K  K  E  S  G  L  Q  V  P  F  S  F  N  R  G  C  T  *  C  K  R  G  E  C  C  L  *  I  A  S  K  A  A  R  A  E  F  V  A  I  H  T  *  *  L  P  Y  I  V  E  :  I  L  K  G  K  R  S  Q  C  *  E  N  Y  S  D  V  G  R  N  A  *  L  E  E  R  V  W  S  R  H  N  I  A   : G  F  *  L  *  R  V  R  R  S  I  A  V  L  P  T  R  I  S  W  G  *  *  G  G  K  T  C  L  Y  R  K  A  W  T  S  *  S  E  Q  T  N  A  D  N  H  N  *  S  L  H  K  I  S  C  P  R  I  *  K  G  T  T  *  E  V  P  C  M  F  C  C  C  K  E  K  N  L  H  N  N  Y  N  F  G  C  A  R  L   : R  D  *  E  F  H  K  D  S  C  *  S  F  G  G  H  G  K  N  *  *  *  L  L  S  *   : D  T  A  S  D  V  H  C  Q  C  W  P  W  L  Q  K  D  A  L  A  S  S  S  K  I  S  G  C  K  D  Y  C  K  D  T   : G  A  R  S  Q  I  L  G  *  T  T  *  S  Y  *  P  K  :  S  I  A  *  L  F  R  W  L  L  Y  L  F  *  R  G  W  L  P  Q  V  *  Q  G  S  M  E  *  S  *  S  N  E   : A  C  L  *  C  R  G  N  N  C  E  G  N  L  *  K  T  W  *  P  K  E  N  *  I  L  Y  T  N  T  P  F  K   : G  K  E  Q  R  H  I  H  K  *  F  S  I  G  C  C  *  L  V  F  T  N  *  R  K  *  *  L  N  F  E  A  D  P  S  R  *  R   : S  *  V  I  R  F  N  S  L  L  *  L  *  *  *  I  Q  P  G  *  S  R  C  H  *  *  A  W  I  A  A  L  A  R  A  V  S  C  E  Q  S  N  E  S  V  H  *  Y  I  A  S  F  W  R :   Y  L  G  N  K  L  V  *  K  N  P  R  E  D  S  E  Q  L  F  Q  L  F  G  K  E  T  D  S  F  H  T  *  T  L  C  I  Y  S  *  S  S  L  R  V  L  E  E  T  D  K  C  F  S  D  *  C  I  G  R  T  T  R  E  Q  F  I  H  *  *  *  S  S  S  K  S  K  G  D  P  S  M  H  A  A  S  S  *  I  G  K  F  I  G  R  N  K  Q  K  A  R  *  D  P  S  R  E  G  S  N  A  S  S  V  T  *  Q  D  Q  V  C  R  S  *  P  R  K  N  K  K   : G  I  A  C  D  G  I  E  A  T  *  N  Y  R  V  I  G  Q  P  K  R  V  E  L  S   : *  A  E  I  V  V  L  N  I  V  R  L  E  I  *  V  P  G  Q  R  D  D  N  L  L  L  L  T  M  L  R  R  E  M  L  A  Y  A  P  P  A  V  V  T  K  F  S  F  F  F  F  L  Y  N  V  L  Y  R  T  C  S  C  Y  C  K  M  M  F  D  Y  T  V  L  L  N  I  L  K  K  S  L  K  E  S  P  L  R  V  *   </second_frame>
            <third_frame>   *  V  R  D  R  K  R  Y  S  L  R  I  Y  T  Y  R  E  G  K  P  I  F  I  E  R  E  T  L  E  R  E  K  A  M  Y  V  Y  I  *  A  I  *  I  T  V  K  K  T  F  F  F  I  P  P  L  F  V  H  S  L  S  S  K  T  T  E  F  S  R  N  L  *  R  F  E  V  K  V  L  V  F  F  Q  I  F  L  G  I  Y  D  F  R  E  K  K  S  M  Q  K  L  R  L  M  V  D  L  A  C  V  L  L  G  F  S :   S  E  T  *  A  R  M  V  F  L  R  N  S  I  D  C  F  K  R  *  E  P  H  F  L  R  Y  S  Y  I  L  F  V  G  R  M  S   : E  W  L  D  A  Y  D  D  V  R  E  R  R  S  D  F  E  V  S  E  D  E  R  R  R  S  R  I  G  T  F  K  K  K  A  L  H  A  S  N  K  F  T  H  S  L  K  K  R  G  K  R  K  V  D  Y  R  F  P  S  V  S  I  E  D  V  R  D  A  K  E  E  N  A  V  C  E  L  R  Q  R  L  L  E  R  N  L  L  P  S  I  H  D  D  Y  H  T  L  L  R :   F  L  K  A  R  D  L  N  V  E  K  T  I  P  M  W  E  E  M  L  N  W  R  K  E  F  G  A  D  T  I  L  Q  :  D  F  D  F  D  E  L  E  E  V  L  Q  F  Y  P  Q  G  Y  H  G  V  D  R  E  G  R  P  V  Y  I  E  R  L  G  Q  A  N  P  N  K  L  M  R  I  T  T  I  D  R  Y  I  K  Y  H  V  Q  E  F  E  R  A  L  H  E  K  F  P  A  C  S  V  A  A  K  K  R  I  C  T  T  T  T  I  L  D  V  Q  G  L  :  G  I  K  N  F  T  R  T  A  A  S  L  L  A  A  M  A  K  I  D  N  S  Y  Y  P  E  :  T  L  H  R  M  F  I  V  N  A  G  P  G  F  K  K  M  L  W  P  A  A  Q  K  F  L  D  A  K  T  I  A  K  I  Q  :  V  L  D  P  K  S  L  G  K  L  H  E  V  I  D  P  S :   Q  L  P  D  F  L  G  G  S  C  T  C  S  D  E  G  G  C  L  R  S  N  K  G  P  W  S  D  P  E  V  M  K  :  L  V  Y  N  V  E  A  T  T  V  K  E  I  S  R  K  L  G  D  Q  R  K  I  E  S  Y  I  Q  I  R  P  S  K  :  G  R  S  R  D  T  S  T  S  D  S  V  S  D  A  A  D  L  C  S  P  I  R  G  N  S  S  S  I  L  R  L  T  P  V  D  E  E  :  A  R  S  S  D  S  T  A  Y  C  S  C  D  D  E  F  S  L  G  D  R  G  V  T  N  E  H  G  L  L  H  W  Q  E  Q  S  P  V  S  S  P  M  N  R  S  T  N  T  L  P  H  S  G   : G  T  W  A  I  N  W  C  E  R  I  Q  E  K  I  L  S  S  C  F  S  C  L  E  R  K  L  I  P  F  I  L  K  L  F  A  F  I  R  S  L  P  F  E  Y  W  R  K  R  T  N  V  F  P  T  N  A  L  E  E  R  Q  G  S  S  S  S  I  N  D  E  A  V  Q  R  V  R  E  I  H  P  C  M  Q  R  L  H  K  L  E  N  L  L  E  E  I  N  K  K  P  A  E  I  P  A  E  K  D  R  M  L  H  Q  S  L  N  R  I  K  S  V  E  V  D  L  E  K  T  K  R  :  V  L  H  A  T  V  L  K  Q  L  E  I  T  E  L  L  D  N  L  K  E  S  S  F  H  :  R  R  R  L  W  C  *  I  L  *  G  W  R  F  E  Y  Q  D  N  A  M  I  T  F  Y  C  *  L  C  C  E  G  R  C  *  L  M  H  L  Q  Q  W  *  Q  S  F  P  F  F  F  F  C  T  M  S  F  T  E  H  A  V  V  T  A  R  *  C  L  I  I  L  Y  C  *  T  S  *  R  K  A  *  K  K  A  L  *  G  F  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58935" stop="58986"/>
                    <exon start="59094" stop="59391"/>
                    <exon start="59659" stop="59758"/>
                    <exon start="59848" stop="60114"/>
                    <exon start="60608" stop="60685"/>
                    <exon start="60788" stop="60892"/>
                    <exon start="60999" stop="61048"/>
                    <exon start="61143" stop="61242"/>
                    <exon start="61359" stop="61457"/>
                    <exon start="61540" stop="61653"/>
                    <exon start="61758" stop="61917"/>
                    <exon start="62707" stop="63095"/>
                    <exon start="63206" stop="63280"/>
                    <exon start="63622" stop="63642"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1905</number_coding_nucleotides>
                  <number_encoded_amino_acids>635</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPHFLRYSYILFVGRMSEWLDAYDDVRERRSDFEVSEDERRRSRIGTFKKKALHASNKFTHSLKKRGKRKVDYRFPSVSIEDVRDAKEENAVCELRQRLLERNLLPSIHDDYHTLLRFLKARDLNVEKTIPMWEEMLNWRKEFGADTILQDFDFDELEEVLQFYPQGYHGVDREGRPVYIERLGQANPNKLMRITTIDRYIKYHVQEFERALHEKFPACSVAAKKRICTTTTILDVQGLGIKNFTRTAASLLAAMAKIDNSYYPETLHRMFIVNAGPGFKKMLWPAAQKFLDAKTIAKIQVLDPKSLGKLHEVIDPSQLPDFLGGSCTCSDEGGCLRSNKGPWSDPEVMKLVYNVEATTVKEISRKLGDQRKIESYIQIRPSKGRSRDTSTSDSVSDAADLCSPIRGNSSSILRLTPVDEEARSSDSTAYCSCDDEFSLGDRGVTNEHGLLHWQEQSPVSSPMNRSTNTLPHSGGTWAINWCERIQEKILSSCFSCLERKLIPFILKLFAFIRSLPFEYWRKRTNVFPTNALEERQGSSSSINDEAVQRVREIHPCMQRLHKLENLLEEINKKPAEIPAEKDRMLHQSLNRIKSVEVDLEKTKRVLHATVLKQLEITELLDNLKESSFHRRRLWC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63666" stop="63887"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPGQRDDNLLLLTMLRREMLAYAPPAVVTKFSFFFFLYNVLYRTCSCYCKMMFDYTVLLNILKKSLKESPLRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="64757" PGL_stop="67546"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64757" e_stop="65177"/>
            <exon e_start="65263" e_stop="65319"/>
            <exon e_start="66938" e_stop="67546"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.918" e_score="1.000"/>
          <exon-only e_score="0.899"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64757" e_stop="65177" e_length="421"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65178" i_stop="65262" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65263" e_stop="65319" e_length="57"/>
          </exon>
          <intron i_serial="2" don_prob="0.899" acc_prob="0.918">
            <gDNA_intron_boundary i_start="65320" i_stop="66937" i_length="1618"/>
          </intron>
          <exon e_serial="3" e_score="0.899">
            <gDNA_exon_boundary e_start="66938" e_stop="67546" e_length="609"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64757" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702881" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64859" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64902" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64902" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205522" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64904" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270810" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64921" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64930" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64936" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64945" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65001" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65007" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65015" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65015" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65015" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65083" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65112" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434711" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65112" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65112" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409741" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65127" stop="65177"/>
              <exon start="65263" stop="65319"/>
              <exon start="66938" stop="67282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274917" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65300" stop="65319"/>
              <exon start="66938" stop="67413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67039" stop="67533"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67039" stop="67533"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67039" stop="67533"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67079" stop="67477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67079" stop="67475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67079" stop="67442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67089" stop="67546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304781" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCATGACAATTTACGCGTAGAACGGCGCTAGCTGTAGATGCTGTACCCACTCCATTTATTTTTTCTTTCTTATTATATGCTTTTAATAATTTTATGTCGTTATTAAACTCAAAATATTTTCTATTTTCTATTTCCAATATGAACTCAAACTTACTGTAAACAATTAGCTGGCAAGAACAGAGATAACCTTTGTTCAAAGGGAAAGAGAACAGATAGATCTCTTTCTATTTCTGTTTTTTTCTCAAAGATCACTTTTTTTCTGGTTCTTTGTTGAAATCTTCTTCCAAGAACTCATCTTTTAGCTTTTATATTCTGATATTTTAGCTCATTTTGCTATAATGGGGTGCAGATATTGTTTTTCTTGTATTTTTCTACTGTTTTCTTTCTTCATTTCAGCTTCAGCTTCAGCTTATTTATCAG : ATGGGATTTTTGTTAATGAAGGTTTAACTGGGAGGAATCTACTTCAAGCCAAGAAAC : CTTGTCCTATCAGCTTCGAGTTTCAAAACTACACAGTGGTCACTACCCAATGCAAAGGACCAAAATACCCAGCCAAACAATGTTGTGAAGCCCTTGCGGAGTTTGCGTGTCCCTATTCAGAATTCGTGAATGATTTGACAACTGATTGTGCCTCTACCATGTTCAGCTACATTAACCTTCACGGGAAGTACCCACCTGGTCTTTTCGCCAGTGAGTGCAATAAAGACAAAAATGGGCTACCATGTCCTGATTCTGCATCATCCGAATCTGCCAGTGCTAATAATAGTCATATGAGCTGTAGACTATCACCGATCCTGATGATTGCAACAGCTCTTACGGGCTTCTTCTTGTTGCTTCTCTGAAGATCTCTTCAAGGTTTTGGCGTAGTTTCTGTATTCTTTATTGTCAAATATTGTTTGAACTCCGGATTTTCTTCTACCATGTTACCACTGATTAACGATCAACAAGAAACTCCTCCTCTTGTAATTCTTGATATATTACAACAGCAAACTGTTGATACTTGTGTATTGAAAATGACTCTCCTTGCTAAACCAAGGATCTGTTAAATATTATTTCACTTTGTTGTATTTTGAGCATGAACGATAGTAA</gDNA_template>
            <first_frame> V  M  T  I  Y  A  *  N  G  A  S  C  R  C  C  T  H  S  I  Y  F  F  F  L  I  I  C  F  *  *  F  Y  V  V  I  K  L  K  I  F  S  I  F  Y  F  Q  Y  E  L  K  L  T  V  N  N  *  L  A  R  T  E  I  T  F  V  Q  R  E  R  E  Q  I  D  L  F  L  F  L  F  F  S  Q  R  S  L  F  F  W  F  F  V  E  I  F  F  Q  E  L  I  F  *  L  L  Y  S  D  I  L  A  H  F  A  I  M  G  C  R  Y  C  F  S  C  I  F  L  L  F  S  F  F  I  S  A  S  A  S  A  Y  L  S   : D  G  I  F  V  N  E  G  L  T  G  R  N  L  L  Q  A  K  K   : P  C  P  I  S  F  E  F  Q  N  Y  T  V  V  T  T  Q  C  K  G  P  K  Y  P  A  K  Q  C  C  E  A  L  A  E  F  A  C  P  Y  S  E  F  V  N  D  L  T  T  D  C  A  S  T  M  F  S  Y  I  N  L  H  G  K  Y  P  P  G  L  F  A  S  E  C  N  K  D  K  N  G  L  P  C  P  D  S  A  S  S  E  S  A  S  A  N  N  S  H  M  S  C  R  L  S  P  I  L  M  I  A  T  A  L  T  G  F  F  L  L  L  L  *  R  S  L  Q  G  F  G  V  V  S  V  F  F  I  V  K  Y  C  L  N  S  G  F  S  S  T  M  L  P  L  I  N  D  Q  Q  E  T  P  P  L  V  I  L  D  I  L  Q  Q  Q  T  V  D  T  C  V  L  K  M  T  L  L  A  K  P  R  I  C  *  I  L  F  H  F  V  V  F  *  A  *  T  I  V  </first_frame>
            <second_frame>  S  *  Q  F  T  R  R  T  A  L  A  V  D  A  V  P  T  P  F  I  F  S  F  L  L  Y  A  F  N  N  F  M  S  L  L  N  S  K  Y  F  L  F  S  I  S  N  M  N  S  N  L  L  *  T  I  S  W  Q  E  Q  R  *  P  L  F  K  G  K  E  N  R  *  I  S  F  Y  F  C  F  F  L  K  D  H  F  F  S  G  S  L  L  K  S  S  S  K  N  S  S  F  S  F  Y  I  L  I  F  *  L  I  L  L  *  W  G  A  D  I  V  F  L  V  F  F  Y  C  F  L  S  S  F  Q  L  Q  L  Q  L  I  Y  Q  :  M  G  F  L  L  M  K  V  *  L  G  G  I  Y  F  K  P  R  N  :  L  V  L  S  A  S  S  F  K  T  T  Q  W  S  L  P  N  A  K  D  Q  N  T  Q  P  N  N  V  V  K  P  L  R  S  L  R  V  P  I  Q  N  S  *  M  I  *  Q  L  I  V  P  L  P  C  S  A  T  L  T  F  T  G  S  T  H  L  V  F  S  P  V  S  A  I  K  T  K  M  G  Y  H  V  L  I  L  H  H  P  N  L  P  V  L  I  I  V  I  *  A  V  D  Y  H  R  S  *  *  L  Q  Q  L  L  R  A  S  S  C  C  F  S  E  D  L  F  K  V  L  A  *  F  L  Y  S  L  L  S  N  I  V  *  T  P  D  F  L  L  P  C  Y  H  *  L  T  I  N  K  K  L  L  L  L  *  F  L  I  Y  Y  N  S  K  L  L  I  L  V  Y  *  K  *  L  S  L  L  N  Q  G  S  V  K  Y  Y  F  T  L  L  Y  F  E  H  E  R  *  * </second_frame>
            <third_frame>   H  D  N  L  R  V  E  R  R  *  L  *  M  L  Y  P  L  H  L  F  F  L  S  Y  Y  M  L  L  I  I  L  C  R  Y  *  T  Q  N  I  F  Y  F  L  F  P  I  *  T  Q  T  Y  C  K  Q  L  A  G  K  N  R  D  N  L  C  S  K  G  K  R  T  D  R  S  L  S  I  S  V  F  F  S  K  I  T  F  F  L  V  L  C  *  N  L  L  P  R  T  H  L  L  A  F  I  F  *  Y  F  S  S  F  C  Y  N  G  V  Q  I  L  F  F  L  Y  F  S  T  V  F  F  L  H  F  S  F  S  F  S  L  F  I  R :   W  D  F  C  *  *  R  F  N  W  E  E  S  T  S  S  Q  E  T :   L  S  Y  Q  L  R  V  S  K  L  H  S  G  H  Y  P  M  Q  R  T  K  I  P  S  Q  T  M  L  *  S  P  C  G  V  C  V  S  L  F  R  I  R  E  *  F  D  N  *  L  C  L  Y  H  V  Q  L  H  *  P  S  R  E  V  P  T  W  S  F  R  Q  *  V  Q  *  R  Q  K  W  A  T  M  S  *  F  C  I  I  R  I  C  Q  C  *  *  *  S  Y  E  L  *  T  I  T  D  P  D  D  C  N  S  S  Y  G  L  L  L  V  A  S  L  K  I  S  S  R  F  W  R  S  F  C  I  L  Y  C  Q  I  L  F  E  L  R  I  F  F  Y  H  V  T  T  D  *  R  S  T  R  N  S  S  S  C  N  S  *  Y  I  T  T  A  N  C  *  Y  L  C  I  E  N  D  S  P  C  *  T  K  D  L  L  N  I  I  S  L  C  C  I  L  S  M  N  D  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65060" stop="65177"/>
                    <exon start="65263" stop="65319"/>
                    <exon start="66938" stop="67299"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYSDILAHFAIMGCRYCFSCIFLLFSFFISASASAYLSDGIFVNEGLTGRNLLQAKKPCPISFEFQNYTVVTTQCKGPKYPAKQCCEALAEFACPYSEFVNDLTTDCASTMFSYINLHGKYPPGLFASECNKDKNGLPCPDSASSESASANNSHMSCRLSPILMIATALTGFFLLLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67300" stop="67503"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSLQGFGVVSVFFIVKYCLNSGFSSTMLPLINDQQETPPLVILDILQQQTVDTCVLKMTLLAKPRIC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="67512" PGL_stop="66957"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67512" e_stop="66957"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="67512" e_stop="66957" e_length="556"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67512" stop="66957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290468" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATAATATTTAACAGATCCTTGGTTTAGCAAGGAGAGTCATTTTCAATACACAAGTATCAACAGTTTGCTGTTGTAATATATCAAGAATTACAAGAGGAGGAGTTTCTTGTTGATCGTTAATCAGTGGTAACATGGTAGAAGAAAATCCGGAGTTCAAACAATATTTGACAATAAAGAATACAGAAACTACGCCAAAACCTTGAAGAGATCTTCAGAGAAGCAACAAGAAGAAGCCCGTAAGAGCTGTTGCAATCATCAGGATCGGTGATAGTCTACAGCTCATATGACTATTATTAGCACTGGCAGATTCGGATGATGCAGAATCAGGACATGGTAGCCCATTTTTGTCTTTATTGCACTCACTGGCGAAAAGACCAGGTGGGTACTTCCCGTGAAGGTTAATGTAGCTGAACATGGTAGAGGCACAATCAGTTGTCAAATCATTCACGAATTCTGAATAGGGACACGCAAACTCCGCAAGGGCTTCACAACATTGTTTGGCTGGGTATTTTGGTCCTTTGCATTGGGTAGTGACCACTGTGTAGTTTTGAAAC</gDNA_template>
            <first_frame> K  *  Y  L  T  D  P  W  F  S  K  E  S  H  F  Q  Y  T  S  I  N  S  L  L  L  *  Y  I  K  N  Y  K  R  R  S  F  L  L  I  V  N  Q  W  *  H  G  R  R  K  S  G  V  Q  T  I  F  D  N  K  E  Y  R  N  Y  A  K  T  L  K  R  S  S  E  K  Q  Q  E  E  A  R  K  S  C  C  N  H  Q  D  R  *  *  S  T  A  H  M  T  I  I  S  T  G  R  F  G  *  C  R  I  R  T  W  *  P  I  F  V  F  I  A  L  T  G  E  K  T  R  W  V  L  P  V  K  V  N  V  A  E  H  G  R  G  T  I  S  C  Q  I  I  H  E  F  *  I  G  T  R  K  L  R  K  G  F  T  T  L  F  G  W  V  F  W  S  F  A  L  G  S  D  H  C  V  V  L  K  </first_frame>
            <second_frame>  N  N  I  *  Q  I  L  G  L  A  R  R  V  I  F  N  T  Q  V  S  T  V  C  C  C  N  I  S  R  I  T  R  G  G  V  S  C  *  S  L  I  S  G  N  M  V  E  E  N  P  E  F  K  Q  Y  L  T  I  K  N  T  E  T  T  P  K  P  *  R  D  L  Q  R  S  N  K  K  K  P  V  R  A  V  A  I  I  R  I  G  D  S  L  Q  L  I  *  L  L  L  A  L  A  D  S  D  D  A  E  S  G  H  G  S  P  F  L  S  L  L  H  S  L  A  K  R  P  G  G  Y  F  P  *  R  L  M  *  L  N  M  V  E  A  Q  S  V  V  K  S  F  T  N  S  E  *  G  H  A  N  S  A  R  A  S  Q  H  C  L  A  G  Y  F  G  P  L  H  W  V  V  T  T  V  *  F  *  N </second_frame>
            <third_frame>   I  I  F  N  R  S  L  V  *  Q  G  E  S  F  S  I  H  K  Y  Q  Q  F  A  V  V  I  Y  Q  E  L  Q  E  E  E  F  L  V  D  R  *  S  V  V  T  W  *  K  K  I  R  S  S  N  N  I  *  Q  *  R  I  Q  K  L  R  Q  N  L  E  E  I  F  R  E  A  T  R  R  S  P  *  E  L  L  Q  S  S  G  S  V  I  V  Y  S  S  Y  D  Y  Y  *  H  W  Q  I  R  M  M  Q  N  Q  D  M  V  A  H  F  C  L  Y  C  T  H  W  R  K  D  Q  V  G  T  S  R  E  G  *  C  S  *  T  W  *  R  H  N  Q  L  S  N  H  S  R  I  L  N  R  D  T  Q  T  P  Q  G  L  H  N  I  V  W  L  G  I  L  V  L  C  I  G  *  *  P  L  C  S  F  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0309F18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="76082" PGL_stop="69819"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76082" e_stop="75611"/>
            <exon e_start="75438" e_stop="75353"/>
            <exon e_start="75181" e_stop="75111"/>
            <exon e_start="74948" e_stop="74881"/>
            <exon e_start="74320" e_stop="74259"/>
            <exon e_start="73931" e_stop="73834"/>
            <exon e_start="72997" e_stop="72916"/>
            <exon e_start="72458" e_stop="72316"/>
            <exon e_start="71617" e_stop="71469"/>
            <exon e_start="71028" e_stop="70895"/>
            <exon e_start="70721" e_stop="70603"/>
            <exon e_start="70195" e_stop="69819"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.541" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.909" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.830" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76082" e_stop="75611" e_length="472"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.891">
            <gDNA_intron_boundary i_start="75610" i_stop="75439" i_length="172"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75438" e_stop="75353" e_length="86"/>
          </exon>
          <intron i_serial="2" don_prob="0.942" acc_prob="0.948">
            <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75181" e_stop="75111" e_length="71"/>
          </exon>
          <intron i_serial="3" don_prob="0.924" acc_prob="0.541">
            <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74948" e_stop="74881" e_length="68"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.965">
            <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74320" e_stop="74259" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.822" acc_prob="0.857">
            <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73931" e_stop="73834" e_length="98"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="73833" i_stop="72998" i_length="836"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72997" e_stop="72916" e_length="82"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.973">
            <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="72458" e_stop="72316" e_length="143"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.909">
            <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="71617" e_stop="71469" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.936" acc_prob="0.965">
            <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="71028" e_stop="70895" e_length="134"/>
          </exon>
          <intron i_serial="10" don_prob="0.986" acc_prob="0.830">
            <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="70721" e_stop="70603" e_length="119"/>
          </exon>
          <intron i_serial="11" don_prob="0.995" acc_prob="0.991">
            <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407"/>
          </intron>
          <exon e_serial="12" e_score="0.997">
            <gDNA_exon_boundary e_start="70195" e_stop="69819" e_length="377"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76082" stop="75611"/>
              <exon start="75438" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76062" stop="75611"/>
              <exon start="75438" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76020" stop="75622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76019" stop="75611"/>
              <exon start="75438" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75961" stop="75611"/>
              <exon start="75438" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75961" stop="75632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75952" stop="75611"/>
              <exon start="75438" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556819" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75898" stop="75626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75412" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75152" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75112" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261487" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72406" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71534" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71017" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70979" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412714" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70964" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325798" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70195" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70174" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTGCTCAAATCAGTGTGTGTTTGCAAACACGAGTTTCAGTTTCATGAAGAATGAGTGACTATTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAG : GACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG : GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG : GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG : GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG : ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG : GCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA : TTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAG : AACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT : GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG : AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT : TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAATACAA</gDNA_template>
            <first_frame> V  A  Q  I  S  V  C  L  Q  T  R  V  S  V  S  *  R  M  S  D  Y  S  A  K  N  C  *  T  L  S  H  F  M  T  G  A  V  P  Q  Q  P  W  L  C  C  C  A  R  Y  G  N  P  Y  L  L  V  P  L  R  A  I  P  P  Q  L  R  S  R  L  S  I  P  W  I  G  S  T  R  *  *  C  I  Y  R  R  R  P  P  E  N  L  I  G  F  R  *  I  F  S  F  K  F  *  R  F  *  G  Q  K  S  L  L  S  *  L  L  Y  V  N  P  G  N  T  L  F  P  I  I  A  Y  G  F  T  F  F  R  I  T  M  S  L  G  I  L  L  F  S  L  K  L  T  *  D  L  D  L  L   : G  R  F  Q  I  Q  Y  Q  N  C  H  S  *  V  F  M  V  N  V  L  K  C  P  V  L  L  L  L  M  :  V  G  L  A  I  A  N  L  V  G  V  S  I  V  L  R  Q  G  D  Q  R  H  F  W :   S  L  A  T  L  N  L  Q  C  I  L  D  *  D  T  S  F  Q  R  Y  T  P   : G  C  R  *  K  L  Q  H  S  R  S  L  C  P  F  R  F  A  I  M  M  :  I  L  N  L  I  K  Q  L  E  R  S  *  K  T  R  S  I  L  H  Y  L  T  *  M  F  L  L  F  V  L  S  T  R :   L  F  *  L  Y  L  L  Q  G  K  F  Q  E  *  *  S  T  L  G  L  T  R  H  L  L  F  Q  :  F  S  T  V  K  S  C  T  K  *  V  W  K  L  W  E  L  E  H  *  S  L  Q  D  S  L  R  S  R  C  N  R  R  I  F  I  L  G  H  F  T  L  C  G  L  *  K  R :   T  F  V  I  L  H  L  I  M  K  L  N  Y  P  K  I  P  T  H  L  F  R  S  G  L  K  V  A  L  H  F  Q  K  S  A  L  K  Q  E  R  F  C  S  S  L  A  L  Q  E   : C  V  L  W  V  Y  R  M  L  W  R  C  A  W  S  T  A  M  T  L  N  *  W  L  M  I  A  G  T  K  Q  *  F  W  L  G  E  V  H  V  C  L  D  *  Q  :  K  D  *  R  R  K  C  V  N  F  F  L  H  A  *  V  M  E  S  E  Y  F  L  P  H  M  A  *  I  L  L  G  M  G  L  S  *  L  A  I :   *  A  P  S  P  V  P  G  V  *  *  K  S  N  F  V  I  G  R  D  A  S  L  C  G  D  Y  C  C  S  G  T  A  G  G  I  A  K  D  Q  E  F  *  C  A  S  W  L  K  I  N  Y  C  I  N  D  *  I  I  C  *  R  Y  K  Y  K  A  I  Y  T  S  S  V  R  L  I  Y  V  V  Q  S  C  G  S  A  K  H  M  M  Y  K  I  L  D  Y  *  G  S  S  K  W  S  E  Y  L  *  V  G  L  L  D  L  *  *  R  S  T  F  F  R  L  C  V  N  T  </first_frame>
            <second_frame>  L  L  K  S  V  C  V  C  K  H  E  F  Q  F  H  E  E  *  V  T  I  Q  L  K  T  V  R  P  S  P  I  S  *  L  E  P  C  H  N  N  H  G  Y  V  V  A  Q  G  M  G  I  R  I  Y  S  F  H  F  E  Q  F  H  L  N  F  D  L  D  C  Q  F  H  G  S  V  R  P  D  D  D  V  Y  T  D  G  V  H  R  R  I  *  S  D  S  V  R  Y  F  H  S  N  F  E  D  F  R  A  K  R  V  C  *  A  D  F  C  M  *  I  L  E  I  H  C  F  R  *  S  P  M  D  L  L  S  S  E  S  P  *  A  L  G  F  Y  F  F  L  *  N  S  L  E  I  W  T  S  *  :  D  V  S  K  F  S  T  R  I  V  I  H  E  Y  L  W  S  T  C  S  S  A  R  C  Y  Y  Y  *  W :   W  V  W  L  L  Q  I  W  L  E  *  V  *  C  S  V  R  E  I  S  D  I  F   : G  V  W  Q  H  *  I  S  N  V  F  *  I  E  T  L  L  F  N  D  I  H  Q  :  D  A  G  E  N  F  N  T  A  D  H  C  V  H  S  D  L  P  L  *  * :   Y  *  I  *  *  S  S  *  N  A  V  K  R  R  D  P  F  C  I  I  *  H  E  C  S  C  C  L  C  C  Q  P   : G  C  F  S  F  I  C  C  K  E  S  F  R  N  S  S  Q  H  W  V  *  P  D  I  Y  C  S  N :   S  L  R  *  S  H  A  P  S  R  C  G  S  C  G  N  W  S  I  E  A  Y  R  I  P  *  G  A  D  A  T  E  E  Y  L  F  W  V  T  L  H  C  A  D  S  E  R   : E  P  L  L  Y  C  T  *  L  *  S  *  T  I  Q  R  Y  Q  R  I  F  S  D  R  V  *  R  L  L  Y  T  F  R  R  A  L  *  N  R  R  D  F  V  P  A  S  H  C  R  S  :  A  C  Y  G  F  T  E  C  C  G  A  V  H  G  A  L  P  *  R  *  I  N  G  *  *  *  L  V  Q  N  S  S  F  G  W  G  K  C  M  F  A  W  I  S  R :   K  I  R  E  G  S  V  *  T  S  S  S  M  H  E  *  W  N  Q  S  T  S  S  P  I  W  R  R  F  C  L  V  W  G  *  A  D  W  Q   : F  E  H  L  P  Q  F  L  V  C  D  E  K  A  I  S  S  *  V  E  T  Q  V  Y  V  V  I  T  V  A  V  A  L  Q  V  V  L  P  K  I  K  S  F  D  V  P  R  G  *  R  S  T  I  A  S  M  I  R  S  F  V  K  D  I  N  I  R  L  F  I  H  Q  V  *  D  *  F  M  S  F  S  H  A  D  L  L  S  I  *  C  T  K  S  *  I  I  E  V  V  P  N  G  V  N  I  C  K  L  D  F  *  T  Y  N  K  G  A  P  F  S  G  Y  V  L  I  Q </second_frame>
            <third_frame>   C  S  N  Q  C  V  F  A  N  T  S  F  S  F  M  K  N  E  *  L  F  S  *  K  L  L  D  P  L  P  F  H  D  W  S  R  A  T  T  T  M  A  M  L  L  R  K  V  W  E  S  V  S  T  R  S  T  S  S  N  S  T  S  T  S  I  S  T  V  N  S  M  D  R  F  D  Q  M  M  M  Y  I  Q  T  A  S  T  G  E  F  D  R  I  P  L  D  I  F  I  Q  I  L  K  I  L  G  P  K  E  S  A  K  L  T  S  V  C  K  S  W  K  Y  I  V  S  D  N  R  L  W  I  Y  F  L  Q  N  H  H  E  P  W  D  S  T  F  F  S  E  T  H  L  R  S  G  P  L  R :   T  F  P  N  S  V  P  E  L  S  F  M  S  I  Y  G  Q  R  A  Q  V  P  G  A  I  I  I  D   : G  G  S  G  Y  C  K  F  G  W  S  K  Y  S  A  P  S  G  R  S  A  T  F  L  :  E  F  G  N  I  E  S  P  M  Y  S  R  L  R  H  F  F  S  T  I  Y  T  R :   M  Q  V  K  T  S  T  Q  P  I  I  V  S  I  P  I  C  H  Y  D   : D  T  E  S  D  K  A  A  R  T  Q  L  K  D  A  I  H  S  A  L  F  D  M  N  V  P  A  V  C  A  V  N  Q  :  A  V  L  A  L  F  A  A  R  K  V  S  G  I  V  V  N  I  G  F  N  Q  T  S  I  V  P   : I  L  Y  G  K  V  M  H  Q  V  G  V  E  V  V  G  I  G  A  L  K  L  T  G  F  L  K  E  Q  M  Q  Q  K  N  I  Y  F  G  S  L  Y  T  V  R  T  L  K  E  :  N  L  C  Y  I  A  L  D  Y  E  A  E  L  S  K  D  T  N  A  S  F  Q  I  G  S  E  G  C  F  T  L  S  E  E  R  F  K  T  G  E  I  L  F  Q  P  R  I  A  G  V :   R  A  M  G  L  Q  N  A  V  A  L  C  M  E  H  C  H  D  A  E  L  M  V  D  D  S  W  Y  K  T  V  V  L  A  G  G  S  A  C  L  P  G  L  A   : E  R  L  E  K  E  V  C  E  L  L  P  P  C  M  S  N  G  I  R  V  L  P  P  P  Y  G  V  D  S  A  W  Y  G  A  K  L  I  G  N  :  L  S  T  F  P  S  S  W  C  V  M  K  K  Q  F  R  H  R  S  R  R  K  F  M  W  *  L  L  L  Q  W  H  C  R  W  Y  C  Q  R  S  R  V  L  M  C  L  V  A  E  D  Q  L  L  H  Q  *  L  D  H  L  L  K  I  *  I  *  G  Y  L  Y  I  K  C  K  T  N  L  C  R  S  V  M  R  I  C  *  A  Y  D  V  Q  N  L  R  L  L  R  *  F  Q  M  E  *  I  S  V  S  W  T  S  R  L  I  I  K  E  H  L  F  Q  V  M  C  *  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76011" stop="75611"/>
                    <exon start="75438" stop="75353"/>
                    <exon start="75181" stop="75111"/>
                    <exon start="74948" stop="74881"/>
                    <exon start="74320" stop="74259"/>
                    <exon start="73931" stop="73834"/>
                    <exon start="72997" stop="72916"/>
                    <exon start="72458" stop="72316"/>
                    <exon start="71617" stop="71469"/>
                    <exon start="71028" stop="70895"/>
                    <exon start="70721" stop="70603"/>
                    <exon start="70195" stop="70118"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1488</number_coding_nucleotides>
                  <number_encoded_amino_acids>496</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLDPLPFHDWSRATTTMAMLLRKVWESVSTRSTSSNSTSTSISTVNSMDRFDQMMMYIQTASTGEFDRIPLDIFIQILKILGPKESAKLTSVCKSWKYIVSDNRLWIYFLQNHHEPWDSTFFSETHLRSGPLRTFPNSVPELSFMSIYGQRAQVPGAIIIDGGSGYCKFGWSKYSAPSGRSATFLEFGNIESPMYSRLRHFFSTIYTRMQVKTSTQPIIVSIPICHYDDTESDKAARTQLKDAIHSALFDMNVPAVCAVNQAVLALFAARKVSGIVVNIGFNQTSIVPILYGKVMHQVGVEVVGIGALKLTGFLKEQMQQKNIYFGSLYTVRTLKENLCYIALDYEAELSKDTNASFQIGSEGCFTLSEERFKTGEILFQPRIAGVRAMGLQNAVALCMEHCHDAELMVDDSWYKTVVLAGGSACLPGLAERLEKEVCELLPPCMSNGIRVLPPPYGVDSAWYGAKLIGNLSTFPSSWCVMKKQFRHRSRRKFMW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76020" e_stop="75353"/>
            <exon e_start="75181" e_stop="75111"/>
            <exon e_start="74948" e_stop="74881"/>
            <exon e_start="74320" e_stop="74259"/>
            <exon e_start="73931" e_stop="73834"/>
            <exon e_start="72997" e_stop="72916"/>
            <exon e_start="72458" e_stop="72316"/>
            <exon e_start="71617" e_stop="71469"/>
            <exon e_start="71028" e_stop="70895"/>
            <exon e_start="70721" e_stop="70603"/>
            <exon e_start="70195" e_stop="69819"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.942" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.541" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.909" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.830" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76020" e_stop="75353" e_length="668"/>
          </exon>
          <intron i_serial="1" don_prob="0.942" acc_prob="0.948">
            <gDNA_intron_boundary i_start="75352" i_stop="75182" i_length="171"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75181" e_stop="75111" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.924" acc_prob="0.541">
            <gDNA_intron_boundary i_start="75110" i_stop="74949" i_length="162"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74948" e_stop="74881" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.965">
            <gDNA_intron_boundary i_start="74880" i_stop="74321" i_length="560"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74320" e_stop="74259" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.822" acc_prob="0.857">
            <gDNA_intron_boundary i_start="74258" i_stop="73932" i_length="327"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="73931" e_stop="73834" e_length="98"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="73833" i_stop="72998" i_length="836"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="72997" e_stop="72916" e_length="82"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.973">
            <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72458" e_stop="72316" e_length="143"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.909">
            <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="71617" e_stop="71469" e_length="149"/>
          </exon>
          <intron i_serial="8" don_prob="0.936" acc_prob="0.965">
            <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="71028" e_stop="70895" e_length="134"/>
          </exon>
          <intron i_serial="9" don_prob="0.986" acc_prob="0.830">
            <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="70721" e_stop="70603" e_length="119"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.991">
            <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407"/>
          </intron>
          <exon e_serial="11" e_score="0.997">
            <gDNA_exon_boundary e_start="70195" e_stop="69819" e_length="377"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76020" stop="75622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75961" stop="75632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75914" stop="75355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75898" stop="75626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75412" stop="75353"/>
              <exon start="75181" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75152" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75112" stop="75111"/>
              <exon start="74948" stop="74881"/>
              <exon start="74320" stop="74259"/>
              <exon start="73931" stop="73834"/>
              <exon start="72997" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261487" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72406" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71534" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71017" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70979" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412714" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70964" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325798" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70195" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70174" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAGCTAAAAACTGTTAGACCCTCTCCCATTTCATGACTGGAGCCGTGCCACAACAACCATGGCTATGTTGTTGCGCAAGGTATGGGAATCCGTATCTACTCGTTCCACTTCGAGCAATTCCACCTCAACTTCGATCTCGACTGTCAATTCCATGGATCGGTTCGACCAGATGATGATGTATATACAGACGGCGTCCACCGGAGAATTTGATCGGATTCCGTTAGATATTTTCATTCAAATTTTGAAGATTTTAGGGCCAAAAGAGTCTGCTAAGCTGACTTCTGTATGTAAATCCTGGAAATACATTGTTTCCGATAATCGCCTATGGATTTACTTTCTTCAGAATCACCATGAGCCTTGGGATTCTACTTTTTTCTCTGAAACTCACTTGAGATCTGGACCTCTTAGGTAAATTCCTTTTTACAGTTCTGCTTTTTGAATGTCAAATTAGGTGAACTTTCCAATTGGTTTAATGTAATTTAGCTGAACTAATTTGGGACGGAGGGAGTAGTAGATGAAAGAGTGAAGTATAGATGAGGATATCATGAGTAGCTGGTTTGATAAGGTGTATGATTTGTAGGACGTTTCCAAATTCAGTACCAGAATTGTCATTCATGAGTATTTATGGTCAACGTGCTCAAGTGCCCGGTGCTATTATTATTGATG : GTGGGTCTGGCTATTGCAAATTTGGTTGGAGTAAGTATAGTGCTCCGTCAGGGAGATCAGCGACATTTTTG : GAGTTTGGCAACATTGAATCTCCAATGTATTCTAGATTGAGACACTTCTTTTCAACGATATACACCAG : GATGCAGGTGAAAACTTCAACACAGCCGATCATTGTGTCCATTCCGATTTGCCATTATGATG : ATACTGAATCTGATAAAGCAGCTAGAACGCAGTTAAAAGACGCGATCCATTCTGCATTATTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAG : GCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA : TTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAG : AACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT : GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG : AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT : TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAATACAA</gDNA_template>
            <first_frame> F  S  *  K  L  L  D  P  L  P  F  H  D  W  S  R  A  T  T  T  M  A  M  L  L  R  K  V  W  E  S  V  S  T  R  S  T  S  S  N  S  T  S  T  S  I  S  T  V  N  S  M  D  R  F  D  Q  M  M  M  Y  I  Q  T  A  S  T  G  E  F  D  R  I  P  L  D  I  F  I  Q  I  L  K  I  L  G  P  K  E  S  A  K  L  T  S  V  C  K  S  W  K  Y  I  V  S  D  N  R  L  W  I  Y  F  L  Q  N  H  H  E  P  W  D  S  T  F  F  S  E  T  H  L  R  S  G  P  L  R  *  I  P  F  Y  S  S  A  F  *  M  S  N  *  V  N  F  P  I  G  L  M  *  F  S  *  T  N  L  G  R  R  E  *  *  M  K  E  *  S  I  D  E  D  I  M  S  S  W  F  D  K  V  Y  D  L  *  D  V  S  K  F  S  T  R  I  V  I  H  E  Y  L  W  S  T  C  S  S  A  R  C  Y  Y  Y  *  W :   W  V  W  L  L  Q  I  W  L  E  *  V  *  C  S  V  R  E  I  S  D  I  F   : G  V  W  Q  H  *  I  S  N  V  F  *  I  E  T  L  L  F  N  D  I  H  Q  :  D  A  G  E  N  F  N  T  A  D  H  C  V  H  S  D  L  P  L  *  * :   Y  *  I  *  *  S  S  *  N  A  V  K  R  R  D  P  F  C  I  I  *  H  E  C  S  C  C  L  C  C  Q  P   : G  C  F  S  F  I  C  C  K  E  S  F  R  N  S  S  Q  H  W  V  *  P  D  I  Y  C  S  N :   S  L  R  *  S  H  A  P  S  R  C  G  S  C  G  N  W  S  I  E  A  Y  R  I  P  *  G  A  D  A  T  E  E  Y  L  F  W  V  T  L  H  C  A  D  S  E  R   : E  P  L  L  Y  C  T  *  L  *  S  *  T  I  Q  R  Y  Q  R  I  F  S  D  R  V  *  R  L  L  Y  T  F  R  R  A  L  *  N  R  R  D  F  V  P  A  S  H  C  R  S  :  A  C  Y  G  F  T  E  C  C  G  A  V  H  G  A  L  P  *  R  *  I  N  G  *  *  *  L  V  Q  N  S  S  F  G  W  G  K  C  M  F  A  W  I  S  R :   K  I  R  E  G  S  V  *  T  S  S  S  M  H  E  *  W  N  Q  S  T  S  S  P  I  W  R  R  F  C  L  V  W  G  *  A  D  W  Q   : F  E  H  L  P  Q  F  L  V  C  D  E  K  A  I  S  S  *  V  E  T  Q  V  Y  V  V  I  T  V  A  V  A  L  Q  V  V  L  P  K  I  K  S  F  D  V  P  R  G  *  R  S  T  I  A  S  M  I  R  S  F  V  K  D  I  N  I  R  L  F  I  H  Q  V  *  D  *  F  M  S  F  S  H  A  D  L  L  S  I  *  C  T  K  S  *  I  I  E  V  V  P  N  G  V  N  I  C  K  L  D  F  *  T  Y  N  K  G  A  P  F  S  G  Y  V  L  I  Q </first_frame>
            <second_frame>  S  A  K  N  C  *  T  L  S  H  F  M  T  G  A  V  P  Q  Q  P  W  L  C  C  C  A  R  Y  G  N  P  Y  L  L  V  P  L  R  A  I  P  P  Q  L  R  S  R  L  S  I  P  W  I  G  S  T  R  *  *  C  I  Y  R  R  R  P  P  E  N  L  I  G  F  R  *  I  F  S  F  K  F  *  R  F  *  G  Q  K  S  L  L  S  *  L  L  Y  V  N  P  G  N  T  L  F  P  I  I  A  Y  G  F  T  F  F  R  I  T  M  S  L  G  I  L  L  F  S  L  K  L  T  *  D  L  D  L  L  G  K  F  L  F  T  V  L  L  F  E  C  Q  I  R  *  T  F  Q  L  V  *  C  N  L  A  E  L  I  W  D  G  G  S  S  R  *  K  S  E  V  *  M  R  I  S  *  V  A  G  L  I  R  C  M  I  C  R  T  F  P  N  S  V  P  E  L  S  F  M  S  I  Y  G  Q  R  A  Q  V  P  G  A  I  I  I  D   : G  G  S  G  Y  C  K  F  G  W  S  K  Y  S  A  P  S  G  R  S  A  T  F  L  :  E  F  G  N  I  E  S  P  M  Y  S  R  L  R  H  F  F  S  T  I  Y  T  R :   M  Q  V  K  T  S  T  Q  P  I  I  V  S  I  P  I  C  H  Y  D   : D  T  E  S  D  K  A  A  R  T  Q  L  K  D  A  I  H  S  A  L  F  D  M  N  V  P  A  V  C  A  V  N  Q  :  A  V  L  A  L  F  A  A  R  K  V  S  G  I  V  V  N  I  G  F  N  Q  T  S  I  V  P   : I  L  Y  G  K  V  M  H  Q  V  G  V  E  V  V  G  I  G  A  L  K  L  T  G  F  L  K  E  Q  M  Q  Q  K  N  I  Y  F  G  S  L  Y  T  V  R  T  L  K  E  :  N  L  C  Y  I  A  L  D  Y  E  A  E  L  S  K  D  T  N  A  S  F  Q  I  G  S  E  G  C  F  T  L  S  E  E  R  F  K  T  G  E  I  L  F  Q  P  R  I  A  G  V :   R  A  M  G  L  Q  N  A  V  A  L  C  M  E  H  C  H  D  A  E  L  M  V  D  D  S  W  Y  K  T  V  V  L  A  G  G  S  A  C  L  P  G  L  A   : E  R  L  E  K  E  V  C  E  L  L  P  P  C  M  S  N  G  I  R  V  L  P  P  P  Y  G  V  D  S  A  W  Y  G  A  K  L  I  G  N  :  L  S  T  F  P  S  S  W  C  V  M  K  K  Q  F  R  H  R  S  R  R  K  F  M  W  *  L  L  L  Q  W  H  C  R  W  Y  C  Q  R  S  R  V  L  M  C  L  V  A  E  D  Q  L  L  H  Q  *  L  D  H  L  L  K  I  *  I  *  G  Y  L  Y  I  K  C  K  T  N  L  C  R  S  V  M  R  I  C  *  A  Y  D  V  Q  N  L  R  L  L  R  *  F  Q  M  E  *  I  S  V  S  W  T  S  R  L  I  I  K  E  H  L  F  Q  V  M  C  *  Y   </second_frame>
            <third_frame>   Q  L  K  T  V  R  P  S  P  I  S  *  L  E  P  C  H  N  N  H  G  Y  V  V  A  Q  G  M  G  I  R  I  Y  S  F  H  F  E  Q  F  H  L  N  F  D  L  D  C  Q  F  H  G  S  V  R  P  D  D  D  V  Y  T  D  G  V  H  R  R  I  *  S  D  S  V  R  Y  F  H  S  N  F  E  D  F  R  A  K  R  V  C  *  A  D  F  C  M  *  I  L  E  I  H  C  F  R  *  S  P  M  D  L  L  S  S  E  S  P  *  A  L  G  F  Y  F  F  L  *  N  S  L  E  I  W  T  S  *  V  N  S  F  L  Q  F  C  F  L  N  V  K  L  G  E  L  S  N  W  F  N  V  I  *  L  N  *  F  G  T  E  G  V  V  D  E  R  V  K  Y  R  *  G  Y  H  E  *  L  V  *  *  G  V  *  F  V  G  R  F  Q  I  Q  Y  Q  N  C  H  S  *  V  F  M  V  N  V  L  K  C  P  V  L  L  L  L  M  :  V  G  L  A  I  A  N  L  V  G  V  S  I  V  L  R  Q  G  D  Q  R  H  F  W :   S  L  A  T  L  N  L  Q  C  I  L  D  *  D  T  S  F  Q  R  Y  T  P   : G  C  R  *  K  L  Q  H  S  R  S  L  C  P  F  R  F  A  I  M  M  :  I  L  N  L  I  K  Q  L  E  R  S  *  K  T  R  S  I  L  H  Y  L  T  *  M  F  L  L  F  V  L  S  T  R :   L  F  *  L  Y  L  L  Q  G  K  F  Q  E  *  *  S  T  L  G  L  T  R  H  L  L  F  Q  :  F  S  T  V  K  S  C  T  K  *  V  W  K  L  W  E  L  E  H  *  S  L  Q  D  S  L  R  S  R  C  N  R  R  I  F  I  L  G  H  F  T  L  C  G  L  *  K  R :   T  F  V  I  L  H  L  I  M  K  L  N  Y  P  K  I  P  T  H  L  F  R  S  G  L  K  V  A  L  H  F  Q  K  S  A  L  K  Q  E  R  F  C  S  S  L  A  L  Q  E   : C  V  L  W  V  Y  R  M  L  W  R  C  A  W  S  T  A  M  T  L  N  *  W  L  M  I  A  G  T  K  Q  *  F  W  L  G  E  V  H  V  C  L  D  *  Q  :  K  D  *  R  R  K  C  V  N  F  F  L  H  A  *  V  M  E  S  E  Y  F  L  P  H  M  A  *  I  L  L  G  M  G  L  S  *  L  A  I :   *  A  P  S  P  V  P  G  V  *  *  K  S  N  F  V  I  G  R  D  A  S  L  C  G  D  Y  C  C  S  G  T  A  G  G  I  A  K  D  Q  E  F  *  C  A  S  W  L  K  I  N  Y  C  I  N  D  *  I  I  C  *  R  Y  K  Y  K  A  I  Y  T  S  S  V  R  L  I  Y  V  V  Q  S  C  G  S  A  K  H  M  M  Y  K  I  L  D  Y  *  G  S  S  K  W  S  E  Y  L  *  V  G  L  L  D  L  *  *  R  S  T  F  F  R  L  C  V  N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75470" stop="75353"/>
                    <exon start="75181" stop="75111"/>
                    <exon start="74948" stop="74881"/>
                    <exon start="74320" stop="74259"/>
                    <exon start="73931" stop="73834"/>
                    <exon start="72997" stop="72916"/>
                    <exon start="72458" stop="72316"/>
                    <exon start="71617" stop="71469"/>
                    <exon start="71028" stop="70895"/>
                    <exon start="70721" stop="70603"/>
                    <exon start="70195" stop="70118"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1119</number_coding_nucleotides>
                  <number_encoded_amino_acids>373</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAGLIRCMICRTFPNSVPELSFMSIYGQRAQVPGAIIIDGGSGYCKFGWSKYSAPSGRSATFLEFGNIESPMYSRLRHFFSTIYTRMQVKTSTQPIIVSIPICHYDDTESDKAARTQLKDAIHSALFDMNVPAVCAVNQAVLALFAARKVSGIVVNIGFNQTSIVPILYGKVMHQVGVEVVGIGALKLTGFLKEQMQQKNIYFGSLYTVRTLKENLCYIALDYEAELSKDTNASFQIGSEGCFTLSEERFKTGEILFQPRIAGVRAMGLQNAVALCMEHCHDAELMVDDSWYKTVVLAGGSACLPGLAERLEKEVCELLPPCMSNGIRVLPPPYGVDSAWYGAKLIGNLSTFPSSWCVMKKQFRHRSRRKFMW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76011" stop="75607"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLDPLPFHDWSRATTTMAMLLRKVWESVSTRSTSSNSTSTSISTVNSMDRFDQMMMYIQTASTGEFDRIPLDIFIQILKILGPKESAKLTSVCKSWKYIVSDNRLWIYFLQNHHEPWDSTFFSETHLRSGPLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="73006" e_stop="72916"/>
            <exon e_start="72458" e_stop="72316"/>
            <exon e_start="71617" e_stop="71469"/>
            <exon e_start="71028" e_stop="70895"/>
            <exon e_start="70721" e_stop="70603"/>
            <exon e_start="70195" e_stop="69819"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.973" e_score="0.967"/>
          <exon-intron don_prob="0.000" acc_prob="0.909" e_score="0.972"/>
          <exon-intron don_prob="0.936" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.830" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="73006" e_stop="72916" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.973">
            <gDNA_intron_boundary i_start="72915" i_stop="72459" i_length="457"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="72458" e_stop="72316" e_length="143"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.909">
            <gDNA_intron_boundary i_start="72315" i_stop="71618" i_length="698"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71617" e_stop="71469" e_length="149"/>
          </exon>
          <intron i_serial="3" don_prob="0.936" acc_prob="0.965">
            <gDNA_intron_boundary i_start="71468" i_stop="71029" i_length="440"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71028" e_stop="70895" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.830">
            <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70721" e_stop="70603" e_length="119"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.991">
            <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="70195" e_stop="69819" e_length="377"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73006" stop="72916"/>
              <exon start="72458" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72406" stop="72316"/>
              <exon start="71617" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71536" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71534" stop="71469"/>
              <exon start="71028" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71017" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70979" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412714" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70964" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325798" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70195" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70174" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACTATAGGCTGTTTTAGCTTTATTTGCTGCAAGGAAAGTTTCAGGAATAGTAGTCAACATTGGGTTTAACCAGACATCTATTGTTCCAA : TTCTCTACGGTAAAGTCATGCACCAAGTAGGTGTGGAAGTTGTGGGAATTGGAGCATTGAAGCTTACAGGATTCCTTAAGGAGCAGATGCAACAGAAGAATATTTATTTTGGGTCACTTTACACTGTGCGGACTCTGAAAGAG : AACCTTTGTTATATTGCACTTGATTATGAAGCTGAACTATCCAAAGATACCAACGCATCTTTTCAGATCGGGTCTGAAGGTTGCTTTACACTTTCAGAAGAGCGCTTTAAAACAGGAGAGATTTTGTTCCAGCCTCGCATTGCAGGAGT : GCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG : AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT : TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAATACAA</gDNA_template>
            <first_frame> K  L  *  A  V  L  A  L  F  A  A  R  K  V  S  G  I  V  V  N  I  G  F  N  Q  T  S  I  V  P   : I  L  Y  G  K  V  M  H  Q  V  G  V  E  V  V  G  I  G  A  L  K  L  T  G  F  L  K  E  Q  M  Q  Q  K  N  I  Y  F  G  S  L  Y  T  V  R  T  L  K  E  :  N  L  C  Y  I  A  L  D  Y  E  A  E  L  S  K  D  T  N  A  S  F  Q  I  G  S  E  G  C  F  T  L  S  E  E  R  F  K  T  G  E  I  L  F  Q  P  R  I  A  G  V :   R  A  M  G  L  Q  N  A  V  A  L  C  M  E  H  C  H  D  A  E  L  M  V  D  D  S  W  Y  K  T  V  V  L  A  G  G  S  A  C  L  P  G  L  A   : E  R  L  E  K  E  V  C  E  L  L  P  P  C  M  S  N  G  I  R  V  L  P  P  P  Y  G  V  D  S  A  W  Y  G  A  K  L  I  G  N  :  L  S  T  F  P  S  S  W  C  V  M  K  K  Q  F  R  H  R  S  R  R  K  F  M  W  *  L  L  L  Q  W  H  C  R  W  Y  C  Q  R  S  R  V  L  M  C  L  V  A  E  D  Q  L  L  H  Q  *  L  D  H  L  L  K  I  *  I  *  G  Y  L  Y  I  K  C  K  T  N  L  C  R  S  V  M  R  I  C  *  A  Y  D  V  Q  N  L  R  L  L  R  *  F  Q  M  E  *  I  S  V  S  W  T  S  R  L  I  I  K  E  H  L  F  Q  V  M  C  *  Y   </first_frame>
            <second_frame>  N  Y  R  L  F  *  L  Y  L  L  Q  G  K  F  Q  E  *  *  S  T  L  G  L  T  R  H  L  L  F  Q  :  F  S  T  V  K  S  C  T  K  *  V  W  K  L  W  E  L  E  H  *  S  L  Q  D  S  L  R  S  R  C  N  R  R  I  F  I  L  G  H  F  T  L  C  G  L  *  K  R :   T  F  V  I  L  H  L  I  M  K  L  N  Y  P  K  I  P  T  H  L  F  R  S  G  L  K  V  A  L  H  F  Q  K  S  A  L  K  Q  E  R  F  C  S  S  L  A  L  Q  E   : C  V  L  W  V  Y  R  M  L  W  R  C  A  W  S  T  A  M  T  L  N  *  W  L  M  I  A  G  T  K  Q  *  F  W  L  G  E  V  H  V  C  L  D  *  Q  :  K  D  *  R  R  K  C  V  N  F  F  L  H  A  *  V  M  E  S  E  Y  F  L  P  H  M  A  *  I  L  L  G  M  G  L  S  *  L  A  I :   *  A  P  S  P  V  P  G  V  *  *  K  S  N  F  V  I  G  R  D  A  S  L  C  G  D  Y  C  C  S  G  T  A  G  G  I  A  K  D  Q  E  F  *  C  A  S  W  L  K  I  N  Y  C  I  N  D  *  I  I  C  *  R  Y  K  Y  K  A  I  Y  T  S  S  V  R  L  I  Y  V  V  Q  S  C  G  S  A  K  H  M  M  Y  K  I  L  D  Y  *  G  S  S  K  W  S  E  Y  L  *  V  G  L  L  D  L  *  *  R  S  T  F  F  R  L  C  V  N  T  </second_frame>
            <third_frame>   T  I  G  C  F  S  F  I  C  C  K  E  S  F  R  N  S  S  Q  H  W  V  *  P  D  I  Y  C  S  N :   S  L  R  *  S  H  A  P  S  R  C  G  S  C  G  N  W  S  I  E  A  Y  R  I  P  *  G  A  D  A  T  E  E  Y  L  F  W  V  T  L  H  C  A  D  S  E  R   : E  P  L  L  Y  C  T  *  L  *  S  *  T  I  Q  R  Y  Q  R  I  F  S  D  R  V  *  R  L  L  Y  T  F  R  R  A  L  *  N  R  R  D  F  V  P  A  S  H  C  R  S  :  A  C  Y  G  F  T  E  C  C  G  A  V  H  G  A  L  P  *  R  *  I  N  G  *  *  *  L  V  Q  N  S  S  F  G  W  G  K  C  M  F  A  W  I  S  R :   K  I  R  E  G  S  V  *  T  S  S  S  M  H  E  *  W  N  Q  S  T  S  S  P  I  W  R  R  F  C  L  V  W  G  *  A  D  W  Q   : F  E  H  L  P  Q  F  L  V  C  D  E  K  A  I  S  S  *  V  E  T  Q  V  Y  V  V  I  T  V  A  V  A  L  Q  V  V  L  P  K  I  K  S  F  D  V  P  R  G  *  R  S  T  I  A  S  M  I  R  S  F  V  K  D  I  N  I  R  L  F  I  H  Q  V  *  D  *  F  M  S  F  S  H  A  D  L  L  S  I  *  C  T  K  S  *  I  I  E  V  V  P  N  G  V  N  I  C  K  L  D  F  *  T  Y  N  K  G  A  P  F  S  G  Y  V  L  I  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72997" stop="72916"/>
                    <exon start="72458" stop="72316"/>
                    <exon start="71617" stop="71469"/>
                    <exon start="71028" stop="70895"/>
                    <exon start="70721" stop="70603"/>
                    <exon start="70195" stop="70118"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>702</number_coding_nucleotides>
                  <number_encoded_amino_acids>234</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVLALFAARKVSGIVVNIGFNQTSIVPILYGKVMHQVGVEVVGIGALKLTGFLKEQMQQKNIYFGSLYTVRTLKENLCYIALDYEAELSKDTNASFQIGSEGCFTLSEERFKTGEILFQPRIAGVRAMGLQNAVALCMEHCHDAELMVDDSWYKTVVLAGGSACLPGLAERLEKEVCELLPPCMSNGIRVLPPPYGVDSAWYGAKLIGNLSTFPSSWCVMKKQFRHRSRRKFMW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="71276" e_stop="70895"/>
            <exon e_start="70721" e_stop="70603"/>
            <exon e_start="70195" e_stop="69819"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.830" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71276" e_stop="70895" e_length="382"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.830">
            <gDNA_intron_boundary i_start="70894" i_stop="70722" i_length="173"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70721" e_stop="70603" e_length="119"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.991">
            <gDNA_intron_boundary i_start="70602" i_stop="70196" i_length="407"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="70195" e_stop="69819" e_length="377"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71276" stop="70922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71258" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="70146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71017" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70979" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69840"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412714" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70964" stop="70895"/>
              <exon start="70721" stop="70603"/>
              <exon start="70195" stop="69826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325798" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70195" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70174" stop="69819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCGAATGGAGAGACAGATTTGTACTCAGGGCGGGTGGGGGCAGTTCTAGACATCGTATTCTCATTTTGAGTCTACACTCTACTATGGTCAACTGATGATGCCGGTTTCTTGACTTATATCATTTAGACAAAGTGGTGTTTTTGTGGATGCAACTGGTGAAACACAACTGACCCCCACCCCCCAATTACCTCAAAAAAGAACAAGGATCTGTAGTATGGAAAATTAGTAGATTTGCGGTCTTGTTTCAGGCGTGCTATGGGTTTACAGAATGCTGTGGCGCTGTGCATGGAGCACTGCCATGACGCTGAATTAATGGTTGATGATAGCTGGTACAAAACAGTAGTTTTGGCTGGGGGAAGTGCATGTTTGCCTGGATTAGCAG : AAAGATTAGAGAAGGAAGTGTGTGAACTTCTTCCTCCATGCATGAGTAATGGAATCAGAGTACTTCCTCCCCCATATGGCGTAGATTCTGCTTGGTATGGGGCTAAGCTGATTGGCAAT : TTGAGCACCTTCCCCAGTTCCTGGTGTGTGATGAAAAAGCAATTTCGTCATAGGTCGAGACGCAAGTTTATGTGGTGATTACTGTTGCAGTGGCACTGCAGGTGGTATTGCCAAAGATCAAGAGTTTTGATGTGCCTCGTGGCTGAAGATCAACTATTGCATCAATGATTAGATCATTTGTTAAAGATATAAATATAAGGCTATTTATACATCAAGTGTAAGACTAATTTATGTCGTTCAGTCATGCGGATCTGCTAAGCATATGATGTACAAAATCTTAGATTATTGAGGTAGTTCCAAATGGAGTGAATATCTGTAAGTTGGACTTCTAGACTTATAATAAAGGAGCACCTTTTTCAGGTTATGTGTTAATACAA</gDNA_template>
            <first_frame> A  N  G  E  T  D  L  Y  S  G  R  V  G  A  V  L  D  I  V  F  S  F  *  V  Y  T  L  L  W  S  T  D  D  A  G  F  L  T  Y  I  I  *  T  K  W  C  F  C  G  C  N  W  *  N  T  T  D  P  H  P  P  I  T  S  K  K  N  K  D  L  *  Y  G  K  L  V  D  L  R  S  C  F  R  R  A  M  G  L  Q  N  A  V  A  L  C  M  E  H  C  H  D  A  E  L  M  V  D  D  S  W  Y  K  T  V  V  L  A  G  G  S  A  C  L  P  G  L  A   : E  R  L  E  K  E  V  C  E  L  L  P  P  C  M  S  N  G  I  R  V  L  P  P  P  Y  G  V  D  S  A  W  Y  G  A  K  L  I  G  N  :  L  S  T  F  P  S  S  W  C  V  M  K  K  Q  F  R  H  R  S  R  R  K  F  M  W  *  L  L  L  Q  W  H  C  R  W  Y  C  Q  R  S  R  V  L  M  C  L  V  A  E  D  Q  L  L  H  Q  *  L  D  H  L  L  K  I  *  I  *  G  Y  L  Y  I  K  C  K  T  N  L  C  R  S  V  M  R  I  C  *  A  Y  D  V  Q  N  L  R  L  L  R  *  F  Q  M  E  *  I  S  V  S  W  T  S  R  L  I  I  K  E  H  L  F  Q  V  M  C  *  Y   </first_frame>
            <second_frame>  R  M  E  R  Q  I  C  T  Q  G  G  W  G  Q  F  *  T  S  Y  S  H  F  E  S  T  L  Y  Y  G  Q  L  M  M  P  V  S  *  L  I  S  F  R  Q  S  G  V  F  V  D  A  T  G  E  T  Q  L  T  P  T  P  Q  L  P  Q  K  R  T  R  I  C  S  M  E  N  *  *  I  C  G  L  V  S  G  V  L  W  V  Y  R  M  L  W  R  C  A  W  S  T  A  M  T  L  N  *  W  L  M  I  A  G  T  K  Q  *  F  W  L  G  E  V  H  V  C  L  D  *  Q  :  K  D  *  R  R  K  C  V  N  F  F  L  H  A  *  V  M  E  S  E  Y  F  L  P  H  M  A  *  I  L  L  G  M  G  L  S  *  L  A  I :   *  A  P  S  P  V  P  G  V  *  *  K  S  N  F  V  I  G  R  D  A  S  L  C  G  D  Y  C  C  S  G  T  A  G  G  I  A  K  D  Q  E  F  *  C  A  S  W  L  K  I  N  Y  C  I  N  D  *  I  I  C  *  R  Y  K  Y  K  A  I  Y  T  S  S  V  R  L  I  Y  V  V  Q  S  C  G  S  A  K  H  M  M  Y  K  I  L  D  Y  *  G  S  S  K  W  S  E  Y  L  *  V  G  L  L  D  L  *  *  R  S  T  F  F  R  L  C  V  N  T  </second_frame>
            <third_frame>   E  W  R  D  R  F  V  L  R  A  G  G  G  S  S  R  H  R  I  L  I  L  S  L  H  S  T  M  V  N  *  *  C  R  F  L  D  L  Y  H  L  D  K  V  V  F  L  W  M  Q  L  V  K  H  N  *  P  P  P  P  N  Y  L  K  K  E  Q  G  S  V  V  W  K  I  S  R  F  A  V  L  F  Q  A  C  Y  G  F  T  E  C  C  G  A  V  H  G  A  L  P  *  R  *  I  N  G  *  *  *  L  V  Q  N  S  S  F  G  W  G  K  C  M  F  A  W  I  S  R :   K  I  R  E  G  S  V  *  T  S  S  S  M  H  E  *  W  N  Q  S  T  S  S  P  I  W  R  R  F  C  L  V  W  G  *  A  D  W  Q   : F  E  H  L  P  Q  F  L  V  C  D  E  K  A  I  S  S  *  V  E  T  Q  V  Y  V  V  I  T  V  A  V  A  L  Q  V  V  L  P  K  I  K  S  F  D  V  P  R  G  *  R  S  T  I  A  S  M  I  R  S  F  V  K  D  I  N  I  R  L  F  I  H  Q  V  *  D  *  F  M  S  F  S  H  A  D  L  L  S  I  *  C  T  K  S  *  I  I  E  V  V  P  N  G  V  N  I  C  K  L  D  F  *  T  Y  N  K  G  A  P  F  S  G  Y  V  L  I  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71063" stop="70895"/>
                    <exon start="70721" stop="70603"/>
                    <exon start="70195" stop="70118"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YGKLVDLRSCFRRAMGLQNAVALCMEHCHDAELMVDDSWYKTVVLAGGSACLPGLAERLEKEVCELLPPCMSNGIRVLPPPYGVDSAWYGAKLIGNLSTFPSSWCVMKKQFRHRSRRKFMW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="75617" PGL_stop="76057"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75617" e_stop="76057"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="75617" e_stop="76057" e_length="441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75617" stop="76057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277824" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTCCAGATCTCAAGTGAGTTTCAGAGAAAAAAGTAGAATCCCAAGGCTCATGGTGATTCTGAAGAAAGTAAATCCATAGGCGATTATCGGAAACAATGTATTTCCAGGATTTACATACAGAAGTCAGCTTAGCAGACTCTTTTGGCCCTAAAATCTTCAAAATTTGAATGAAAATATCTAACGGAATCCGATCAAATTCTCCGGTGGACGCCGTCTGTATATACATCATCATCTGGTCGAACCGATCCATGGAATTGACAGTCGAGATCGAAGTTGAGGTGGAATTGCTCGAAGTGGAACGAGTAGATACGGATTCCCATACCTTGCGCAACAACATAGCCATGGTTGTTGTGGCACGGCTCCAGTCATGAAATGGGAGAGGGTCTAACAGTTTTTAGCTGAATAGTCACTCATTCTTCATGAAACTGAAACTCGTGTTT</gDNA_template>
            <first_frame> G  P  D  L  K  *  V  S  E  K  K  V  E  S  Q  G  S  W  *  F  *  R  K  *  I  H  R  R  L  S  E  T  M  Y  F  Q  D  L  H  T  E  V  S  L  A  D  S  F  G  P  K  I  F  K  I  *  M  K  I  S  N  G  I  R  S  N  S  P  V  D  A  V  C  I  Y  I  I  I  W  S  N  R  S  M  E  L  T  V  E  I  E  V  E  V  E  L  L  E  V  E  R  V  D  T  D  S  H  T  L  R  N  N  I  A  M  V  V  V  A  R  L  Q  S  *  N  G  R  G  S  N  S  F  *  L  N  S  H  S  F  F  M  K  L  K  L  V  F </first_frame>
            <second_frame>  V  Q  I  S  S  E  F  Q  R  K  K  *  N  P  K  A  H  G  D  S  E  E  S  K  S  I  G  D  Y  R  K  Q  C  I  S  R  I  Y  I  Q  K  S  A  *  Q  T  L  L  A  L  K  S  S  K  F  E  *  K  Y  L  T  E  S  D  Q  I  L  R  W  T  P  S  V  Y  T  S  S  S  G  R  T  D  P  W  N  *  Q  S  R  S  K  L  R  W  N  C  S  K  W  N  E  *  I  R  I  P  I  P  C  A  T  T  *  P  W  L  L  W  H  G  S  S  H  E  M  G  E  G  L  T  V  F  S  *  I  V  T  H  S  S  *  N  *  N  S  C   </second_frame>
            <third_frame>   S  R  S  Q  V  S  F  R  E  K  S  R  I  P  R  L  M  V  I  L  K  K  V  N  P  *  A  I  I  G  N  N  V  F  P  G  F  T  Y  R  S  Q  L  S  R  L  F  W  P  *  N  L  Q  N  L  N  E  N  I  *  R  N  P  I  K  F  S  G  G  R  R  L  Y  I  H  H  H  L  V  E  P  I  H  G  I  D  S  R  D  R  S  *  G  G  I  A  R  S  G  T  S  R  Y  G  F  P  Y  L  A  Q  Q  H  S  H  G  C  C  G  T  A  P  V  M  K  W  E  R  V  *  Q  F  L  A  E  *  S  L  I  L  H  E  T  E  T  R  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75785" stop="75988"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKISNGIRSNSPVDAVCIYIIIWSNRSMELTVEIEVEVELLEVERVDTDSHTLRNNIAMVVVARLQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="88632" PGL_stop="91865"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88632" e_stop="89240"/>
            <exon e_start="89480" e_stop="89491"/>
            <exon e_start="89814" e_stop="89825"/>
            <exon e_start="90112" e_stop="90212"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.841" acc_prob="0.000" e_score="0.583"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.833"/>
          <exon-only e_score="0.465"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88632" e_stop="89240" e_length="609"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89241" i_stop="89479" i_length="239"/>
          </intron>
          <exon e_serial="2" e_score="0.583">
            <gDNA_exon_boundary e_start="89480" e_stop="89491" e_length="12"/>
          </exon>
          <intron i_serial="2" don_prob="0.841" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89492" i_stop="89813" i_length="322"/>
          </intron>
          <exon e_serial="3" e_score="0.833">
            <gDNA_exon_boundary e_start="89814" e_stop="89825" e_length="12"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89826" i_stop="90111" i_length="286"/>
          </intron>
          <exon e_serial="4" e_score="0.465">
            <gDNA_exon_boundary e_start="90112" e_stop="90212" e_length="101"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88632" stop="89240"/>
              <exon start="89480" stop="89491"/>
              <exon start="89814" stop="89825"/>
              <exon start="90112" stop="90212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88644" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89240"/>
              <exon start="89480" stop="89491"/>
              <exon start="89814" stop="89825"/>
              <exon start="90112" stop="90152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88708" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88725" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACTGAAATCCCCAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA : AAAATAATACTG : AAAAAATAAAAT : AATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGACGCTTTCATATATATTATGGTCACGAGAATGTGGGCAGTAAACAGTTGGGACTTAATAAT</gDNA_template>
            <first_frame> Y  *  N  P  Q  *  P  H  I  L  L  N  T  P  K  F  A  L  H  F  I  K  Q  Q  T  Q  K  M  A  S  A  L  F  S  A  P  T  F  Q  G  L  R  P  L  N  K  P  T  D  S  S  L  F  L  N  K  P  I  A  F  K  P  I  T  K  K  P  R  N  L  A  V  K  A  E  L  N  P  S  V  V  I  S  L  S  T  G  L  S  L  F  L  G  R  F  V  F  F  N  F  Q  R  E  N  V  A  K  Q  V  P  S  Q  N  G  I  S  H  F  E  A  G  D  V  R  A  K  E  Y  I  S  L  L  K  S  N  D  P  V  G  F  N  I  V  D  V  L  A  W  G  S  I  G  H  I  V  A  Y  Y  I  L  A  T  S  S  N  G  Y  D  P  S  F  F  G  *  I  S  N  K  N  I  F  T  I  C  V  F  V  N  *  F  Y  V  K  F  M  W  F  C  A  K  E  L  L  :  K  I  I  L  :  K  K  *  N  :  N  I  *  S  K  N  N  S  G  E  F  W  N  D  A  F  I  Y  I  M  V  T  R  M  W  A  V  N  S  W  D  L  I   </first_frame>
            <second_frame>  T  E  I  P  N  N  H  I  Y  S  S  T  H  P  N  L  H  C  I  S  S  N  N  K  L  K  K  W  H  Q  L  C  F  L  H  Q  L  S  K  V  S  D  L  S  T  N  P  P  T  L  P  S  S  S  T  N  P  S  P  S  N  L  S  P  K  N  P  E  I  S  L  *  K  L  N  S  I  H  P  L  S  S  V  *  A  L  G  F  R  F  S  L  E  G  S  F  S  S  I  S  R  E  K  M  *  R  N  R  C  H  L  R  M  E  F  L  T  L  K  L  E  M  L  G  L  R  N  I  *  V  C  *  N  Q  M  I  Q  L  D  S  I  L  L  M  C  L  L  G  D  L  L  D  I  L  L  L  I  I  S  L  L  L  L  A  M  D  M  I  P  V  S  L  A  E  Y  Q  T  K  I  Y  L  L  Y  V  F  L  L  T  D  F  M  *  N  S  C  G  F  V  P  K  N  Y  * :   K  *  Y  * :   K  N  K  I :   I  Y  K  V  K  I  I  V  G  N  F  G  M  T  L  S  Y  I  L  W  S  R  E  C  G  Q  *  T  V  G  T  *  *  </second_frame>
            <third_frame>   L  K  S  P  I  T  T  Y  T  P  Q  H  T  Q  I  C  I  A  F  H  Q  T  T  N  S  K  N  G  I  S  S  V  F  C  T  N  F  P  R  S  Q  T  S  Q  Q  T  H  R  L  F  P  L  P  Q  Q  T  H  R  L  Q  T  Y  H  Q  K  T  P  K  S  R  C  E  S  *  T  Q  S  I  R  C  H  Q  F  E  H  W  A  F  A  F  P  W  K  V  R  F  L  Q  F  P  E  R  K  C  S  E  T  G  A  I  S  E  W  N  F  S  L  *  S  W  R  C  *  G  *  G  I  Y  K  F  V  K  I  K  *  S  S  W  I  Q  Y  C  *  C  A  C  L  G  I  Y  W  T  Y  C  C  L  L  Y  P  C  Y  F  *  Q  W  I  *  S  Q  F  L  W  L  N  I  K  Q  K  Y  I  Y  Y  M  C  F  C  *  L  I  L  C  E  I  H  V  V  L  C  Q  R  I  T   : K  N  N  T   : E  K  I  K   : *  Y  I  K  *  K  *  *  W  G  I  L  E  *  R  F  H  I  Y  Y  G  H  E  N  V  G  S  K  Q  L  G  L  N  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88650" stop="89153"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHILLNTPKFALHFIKQQTQKMASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKPRNLAVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88644" e_stop="89295"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88644" e_stop="89295" e_length="652"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88644" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88708" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88725" stop="89295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88725" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAATTTC</gDNA_template>
            <first_frame> Q  *  P  H  I  L  L  N  T  P  K  F  A  L  H  F  I  K  Q  Q  T  Q  K  M  A  S  A  L  F  S  A  P  T  F  Q  G  L  R  P  L  N  K  P  T  D  S  S  L  F  L  N  K  P  I  A  F  K  P  I  T  K  K  P  R  N  L  A  V  K  A  E  L  N  P  S  V  V  I  S  L  S  T  G  L  S  L  F  L  G  R  F  V  F  F  N  F  Q  R  E  N  V  A  K  Q  V  P  S  Q  N  G  I  S  H  F  E  A  G  D  V  R  A  K  E  Y  I  S  L  L  K  S  N  D  P  V  G  F  N  I  V  D  V  L  A  W  G  S  I  G  H  I  V  A  Y  Y  I  L  A  T  S  S  N  G  Y  D  P  S  F  F  G  *  I  S  N  K  N  I  F  T  I  C  V  F  V  N  *  F  Y  V  K  F  M  W  F  C  A  K  E  L  L  V  L  S  L  F  S  F  A  F  E  F  D  Y  A  S  K  K  F  </first_frame>
            <second_frame>  N  N  H  I  Y  S  S  T  H  P  N  L  H  C  I  S  S  N  N  K  L  K  K  W  H  Q  L  C  F  L  H  Q  L  S  K  V  S  D  L  S  T  N  P  P  T  L  P  S  S  S  T  N  P  S  P  S  N  L  S  P  K  N  P  E  I  S  L  *  K  L  N  S  I  H  P  L  S  S  V  *  A  L  G  F  R  F  S  L  E  G  S  F  S  S  I  S  R  E  K  M  *  R  N  R  C  H  L  R  M  E  F  L  T  L  K  L  E  M  L  G  L  R  N  I  *  V  C  *  N  Q  M  I  Q  L  D  S  I  L  L  M  C  L  L  G  D  L  L  D  I  L  L  L  I  I  S  L  L  L  L  A  M  D  M  I  P  V  S  L  A  E  Y  Q  T  K  I  Y  L  L  Y  V  F  L  L  T  D  F  M  *  N  S  C  G  F  V  P  K  N  Y  *  Y  Y  L  C  F  L  L  H  L  N  S  T  M  H  P  K  N  F </second_frame>
            <third_frame>   I  T  T  Y  T  P  Q  H  T  Q  I  C  I  A  F  H  Q  T  T  N  S  K  N  G  I  S  S  V  F  C  T  N  F  P  R  S  Q  T  S  Q  Q  T  H  R  L  F  P  L  P  Q  Q  T  H  R  L  Q  T  Y  H  Q  K  T  P  K  S  R  C  E  S  *  T  Q  S  I  R  C  H  Q  F  E  H  W  A  F  A  F  P  W  K  V  R  F  L  Q  F  P  E  R  K  C  S  E  T  G  A  I  S  E  W  N  F  S  L  *  S  W  R  C  *  G  *  G  I  Y  K  F  V  K  I  K  *  S  S  W  I  Q  Y  C  *  C  A  C  L  G  I  Y  W  T  Y  C  C  L  L  Y  P  C  Y  F  *  Q  W  I  *  S  Q  F  L  W  L  N  I  K  Q  K  Y  I  Y  Y  M  C  F  C  *  L  I  L  C  E  I  H  V  V  L  C  Q  R  I  T  S  T  I  S  V  F  F  C  I  *  I  R  L  C  I  Q  K  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88650" stop="89153"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHILLNTPKFALHFIKQQTQKMASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKPRNLAVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="88644" e_stop="89291"/>
            <exon e_start="89812" e_stop="89825"/>
            <exon e_start="90112" e_stop="90172"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.714"/>
          <exon-only e_score="0.459"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88644" e_stop="89291" e_length="648"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89292" i_stop="89811" i_length="520"/>
          </intron>
          <exon e_serial="2" e_score="0.714">
            <gDNA_exon_boundary e_start="89812" e_stop="89825" e_length="14"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89826" i_stop="90111" i_length="286"/>
          </intron>
          <exon e_serial="3" e_score="0.459">
            <gDNA_exon_boundary e_start="90112" e_stop="90172" e_length="61"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88644" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88695" stop="89291"/>
              <exon start="89812" stop="89825"/>
              <exon start="90112" stop="90172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88708" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88725" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTAGTACTATCTCTGTTTTCTTTTGCATTTGAATTCGACTATGCATCCAAAAAA : TTAAAAAATAAAAT : AATATATAAAGTAAAAATAATAGTGGGGAATTTTGGAATGACGCTTTCATATATATTATGG</gDNA_template>
            <first_frame> Q  *  P  H  I  L  L  N  T  P  K  F  A  L  H  F  I  K  Q  Q  T  Q  K  M  A  S  A  L  F  S  A  P  T  F  Q  G  L  R  P  L  N  K  P  T  D  S  S  L  F  L  N  K  P  I  A  F  K  P  I  T  K  K  P  R  N  L  A  V  K  A  E  L  N  P  S  V  V  I  S  L  S  T  G  L  S  L  F  L  G  R  F  V  F  F  N  F  Q  R  E  N  V  A  K  Q  V  P  S  Q  N  G  I  S  H  F  E  A  G  D  V  R  A  K  E  Y  I  S  L  L  K  S  N  D  P  V  G  F  N  I  V  D  V  L  A  W  G  S  I  G  H  I  V  A  Y  Y  I  L  A  T  S  S  N  G  Y  D  P  S  F  F  G  *  I  S  N  K  N  I  F  T  I  C  V  F  V  N  *  F  Y  V  K  F  M  W  F  C  A  K  E  L  L  V  L  S  L  F  S  F  A  F  E  F  D  Y  A  S  K  K  :  L  K  N  K  I :   I  Y  K  V  K  I  I  V  G  N  F  G  M  T  L  S  Y  I  L  W </first_frame>
            <second_frame>  N  N  H  I  Y  S  S  T  H  P  N  L  H  C  I  S  S  N  N  K  L  K  K  W  H  Q  L  C  F  L  H  Q  L  S  K  V  S  D  L  S  T  N  P  P  T  L  P  S  S  S  T  N  P  S  P  S  N  L  S  P  K  N  P  E  I  S  L  *  K  L  N  S  I  H  P  L  S  S  V  *  A  L  G  F  R  F  S  L  E  G  S  F  S  S  I  S  R  E  K  M  *  R  N  R  C  H  L  R  M  E  F  L  T  L  K  L  E  M  L  G  L  R  N  I  *  V  C  *  N  Q  M  I  Q  L  D  S  I  L  L  M  C  L  L  G  D  L  L  D  I  L  L  L  I  I  S  L  L  L  L  A  M  D  M  I  P  V  S  L  A  E  Y  Q  T  K  I  Y  L  L  Y  V  F  L  L  T  D  F  M  *  N  S  C  G  F  V  P  K  N  Y  *  Y  Y  L  C  F  L  L  H  L  N  S  T  M  H  P  K  N :   *  K  I  K   : *  Y  I  K  *  K  *  *  W  G  I  L  E  *  R  F  H  I  Y  Y   </second_frame>
            <third_frame>   I  T  T  Y  T  P  Q  H  T  Q  I  C  I  A  F  H  Q  T  T  N  S  K  N  G  I  S  S  V  F  C  T  N  F  P  R  S  Q  T  S  Q  Q  T  H  R  L  F  P  L  P  Q  Q  T  H  R  L  Q  T  Y  H  Q  K  T  P  K  S  R  C  E  S  *  T  Q  S  I  R  C  H  Q  F  E  H  W  A  F  A  F  P  W  K  V  R  F  L  Q  F  P  E  R  K  C  S  E  T  G  A  I  S  E  W  N  F  S  L  *  S  W  R  C  *  G  *  G  I  Y  K  F  V  K  I  K  *  S  S  W  I  Q  Y  C  *  C  A  C  L  G  I  Y  W  T  Y  C  C  L  L  Y  P  C  Y  F  *  Q  W  I  *  S  Q  F  L  W  L  N  I  K  Q  K  Y  I  Y  Y  M  C  F  C  *  L  I  L  C  E  I  H  V  V  L  C  Q  R  I  T  S  T  I  S  V  F  F  C  I  *  I  R  L  C  I  Q  K   : I  K  K  *  N  :  N  I  *  S  K  N  N  S  G  E  F  W  N  D  A  F  I  Y  I  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88650" stop="89153"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHILLNTPKFALHFIKQQTQKMASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKPRNLAVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="88635" e_stop="89240"/>
            <exon e_start="91281" e_stop="91325"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88635" e_stop="89240" e_length="606"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89241" i_stop="91280" i_length="2040"/>
          </intron>
          <exon e_serial="2" e_score="0.600">
            <gDNA_exon_boundary e_start="91281" e_stop="91325" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88635" stop="89240"/>
              <exon start="91281" stop="91325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88644" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88708" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88725" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAATCCCCAATAACCACATATACTCCTCAACACACCCAAATTTGCATTGCATTTCATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGAATTACTA : ATTCAAAAAAATTAATTCTCAAATATTAATATAATAAAAAATACA</gDNA_template>
            <first_frame> *  N  P  Q  *  P  H  I  L  L  N  T  P  K  F  A  L  H  F  I  K  Q  Q  T  Q  K  M  A  S  A  L  F  S  A  P  T  F  Q  G  L  R  P  L  N  K  P  T  D  S  S  L  F  L  N  K  P  I  A  F  K  P  I  T  K  K  P  R  N  L  A  V  K  A  E  L  N  P  S  V  V  I  S  L  S  T  G  L  S  L  F  L  G  R  F  V  F  F  N  F  Q  R  E  N  V  A  K  Q  V  P  S  Q  N  G  I  S  H  F  E  A  G  D  V  R  A  K  E  Y  I  S  L  L  K  S  N  D  P  V  G  F  N  I  V  D  V  L  A  W  G  S  I  G  H  I  V  A  Y  Y  I  L  A  T  S  S  N  G  Y  D  P  S  F  F  G  *  I  S  N  K  N  I  F  T  I  C  V  F  V  N  *  F  Y  V  K  F  M  W  F  C  A  K  E  L  L  :  I  Q  K  N  *  F  S  N  I  N  I  I  K  N  T </first_frame>
            <second_frame>  E  I  P  N  N  H  I  Y  S  S  T  H  P  N  L  H  C  I  S  S  N  N  K  L  K  K  W  H  Q  L  C  F  L  H  Q  L  S  K  V  S  D  L  S  T  N  P  P  T  L  P  S  S  S  T  N  P  S  P  S  N  L  S  P  K  N  P  E  I  S  L  *  K  L  N  S  I  H  P  L  S  S  V  *  A  L  G  F  R  F  S  L  E  G  S  F  S  S  I  S  R  E  K  M  *  R  N  R  C  H  L  R  M  E  F  L  T  L  K  L  E  M  L  G  L  R  N  I  *  V  C  *  N  Q  M  I  Q  L  D  S  I  L  L  M  C  L  L  G  D  L  L  D  I  L  L  L  I  I  S  L  L  L  L  A  M  D  M  I  P  V  S  L  A  E  Y  Q  T  K  I  Y  L  L  Y  V  F  L  L  T  D  F  M  *  N  S  C  G  F  V  P  K  N  Y  * :   F  K  K  I  N  S  Q  I  L  I  *  *  K  I   </second_frame>
            <third_frame>   K  S  P  I  T  T  Y  T  P  Q  H  T  Q  I  C  I  A  F  H  Q  T  T  N  S  K  N  G  I  S  S  V  F  C  T  N  F  P  R  S  Q  T  S  Q  Q  T  H  R  L  F  P  L  P  Q  Q  T  H  R  L  Q  T  Y  H  Q  K  T  P  K  S  R  C  E  S  *  T  Q  S  I  R  C  H  Q  F  E  H  W  A  F  A  F  P  W  K  V  R  F  L  Q  F  P  E  R  K  C  S  E  T  G  A  I  S  E  W  N  F  S  L  *  S  W  R  C  *  G  *  G  I  Y  K  F  V  K  I  K  *  S  S  W  I  Q  Y  C  *  C  A  C  L  G  I  Y  W  T  Y  C  C  L  L  Y  P  C  Y  F  *  Q  W  I  *  S  Q  F  L  W  L  N  I  K  Q  K  Y  I  Y  Y  M  C  F  C  *  L  I  L  C  E  I  H  V  V  L  C  Q  R  I  T   : N  S  K  K  L  I  L  K  Y  *  Y  N  K  K  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88650" stop="89153"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHILLNTPKFALHFIKQQTQKMASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKPRNLAVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="88691" e_stop="89233"/>
            <exon e_start="91281" e_stop="91320"/>
            <exon e_start="91828" e_stop="91865"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.992"/>
          <exon-intron don_prob="0.000" acc_prob="0.682" e_score="0.600"/>
          <exon-only e_score="0.421"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="88691" e_stop="89233" e_length="543"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89234" i_stop="91280" i_length="2047"/>
          </intron>
          <exon e_serial="2" e_score="0.600">
            <gDNA_exon_boundary e_start="91281" e_stop="91320" e_length="40"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.682">
            <gDNA_intron_boundary i_start="91321" i_stop="91827" i_length="507"/>
          </intron>
          <exon e_serial="3" e_score="0.421">
            <gDNA_exon_boundary e_start="91828" e_stop="91865" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88691" stop="89218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88699" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89233"/>
              <exon start="91281" stop="91320"/>
              <exon start="91828" stop="91865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88701" stop="89175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88702" stop="89166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88708" stop="89225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88725" stop="89177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCAAACAACAAACTCAAAAAATGGCATCAGCTCTGTTTTCTGCACCAACTTTCCAAGGTCTCAGACCTCTCAACAAACCCACCGACTCTTCCCTCTTCCTCAACAAACCCATCGCCTTCAAACCTATCACCAAAAAACCCCGAAATCTCGCTGTGAAAGCTGAACTCAATCCATCCGTTGTCATCAGTTTGAGCACTGGGCTTTCGCTTTTCCTTGGAAGGTTCGTTTTCTTCAATTTCCAGAGAGAAAATGTAGCGAAACAGGTGCCATCTCAGAATGGAATTTCTCACTTTGAAGCTGGAGATGTTAGGGCTAAGGAATATATAAGTTTGTTAAAATCAAATGATCCAGTTGGATTCAATATTGTTGATGTGCTTGCTTGGGGATCTATTGGACATATTGTTGCTTATTATATCCTTGCTACTTCTAGCAATGGATATGATCCCAGTTTCTTTGGCTGAATATCAAACAAAAATATATTTACTATATGTGTTTTTGTTAACTGATTTTATGTGAAATTCATGTGGTTTTGTGCCAAAGA : ATTCAAAAAAATTAATTCTCAAATATTAATATAATAAAAA : TAAAAAGCCAGCAAATGGAGAAAGTAGCCCTCAAACAC</gDNA_template>
            <first_frame> H  Q  T  T  N  S  K  N  G  I  S  S  V  F  C  T  N  F  P  R  S  Q  T  S  Q  Q  T  H  R  L  F  P  L  P  Q  Q  T  H  R  L  Q  T  Y  H  Q  K  T  P  K  S  R  C  E  S  *  T  Q  S  I  R  C  H  Q  F  E  H  W  A  F  A  F  P  W  K  V  R  F  L  Q  F  P  E  R  K  C  S  E  T  G  A  I  S  E  W  N  F  S  L  *  S  W  R  C  *  G  *  G  I  Y  K  F  V  K  I  K  *  S  S  W  I  Q  Y  C  *  C  A  C  L  G  I  Y  W  T  Y  C  C  L  L  Y  P  C  Y  F  *  Q  W  I  *  S  Q  F  L  W  L  N  I  K  Q  K  Y  I  Y  Y  M  C  F  C  *  L  I  L  C  E  I  H  V  V  L  C  Q  R  :  I  Q  K  N  *  F  S  N  I  N  I  I  K   : I  K  S  Q  Q  M  E  K  V  A  L  K  H </first_frame>
            <second_frame>  I  K  Q  Q  T  Q  K  M  A  S  A  L  F  S  A  P  T  F  Q  G  L  R  P  L  N  K  P  T  D  S  S  L  F  L  N  K  P  I  A  F  K  P  I  T  K  K  P  R  N  L  A  V  K  A  E  L  N  P  S  V  V  I  S  L  S  T  G  L  S  L  F  L  G  R  F  V  F  F  N  F  Q  R  E  N  V  A  K  Q  V  P  S  Q  N  G  I  S  H  F  E  A  G  D  V  R  A  K  E  Y  I  S  L  L  K  S  N  D  P  V  G  F  N  I  V  D  V  L  A  W  G  S  I  G  H  I  V  A  Y  Y  I  L  A  T  S  S  N  G  Y  D  P  S  F  F  G  *  I  S  N  K  N  I  F  T  I  C  V  F  V  N  *  F  Y  V  K  F  M  W  F  C  A  K  E :   F  K  K  I  N  S  Q  I  L  I  *  *  K  :  *  K  A  S  K  W  R  K  *  P  S  N   </second_frame>
            <third_frame>   S  N  N  K  L  K  K  W  H  Q  L  C  F  L  H  Q  L  S  K  V  S  D  L  S  T  N  P  P  T  L  P  S  S  S  T  N  P  S  P  S  N  L  S  P  K  N  P  E  I  S  L  *  K  L  N  S  I  H  P  L  S  S  V  *  A  L  G  F  R  F  S  L  E  G  S  F  S  S  I  S  R  E  K  M  *  R  N  R  C  H  L  R  M  E  F  L  T  L  K  L  E  M  L  G  L  R  N  I  *  V  C  *  N  Q  M  I  Q  L  D  S  I  L  L  M  C  L  L  G  D  L  L  D  I  L  L  L  I  I  S  L  L  L  L  A  M  D  M  I  P  V  S  L  A  E  Y  Q  T  K  I  Y  L  L  Y  V  F  L  L  T  D  F  M  *  N  S  C  G  F  V  P  K   : N  S  K  K  L  I  L  K  Y  *  Y  N  K  N :   K  K  P  A  N  G  E  S  S  P  Q  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88692" stop="89153"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKQQTQKMASALFSAPTFQGLRPLNKPTDSSLFLNKPIAFKPITKKPRNLAVKAELNPSVVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="95126" PGL_stop="88644"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89489" e_stop="89473"/>
            <exon e_start="89243" e_stop="88699"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.600"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.600">
            <gDNA_exon_boundary e_start="89489" e_stop="89473" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89472" i_stop="89244" i_length="229"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="89243" e_stop="88699" e_length="545"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89489" stop="89473"/>
              <exon start="89243" stop="88725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732434" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89487" stop="89473"/>
              <exon start="89243" stop="88699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734069" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89487" stop="89473"/>
              <exon start="89243" stop="88701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740988" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89487" stop="89473"/>
              <exon start="89243" stop="88701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738530" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89487" stop="89473"/>
              <exon start="89243" stop="88702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738663" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTATTATTTTCTCTAAT : TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTT</gDNA_template>
            <first_frame> V  L  F  S  L  I :   T  S  N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V  C  </first_frame>
            <second_frame>  Y  Y  F  L  *   : L  L  V  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  V </second_frame>
            <third_frame>   I  I  F  S  N  :  Y  *  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="89488" e_stop="89473"/>
            <exon e_start="89180" e_stop="88797"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.625"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.625">
            <gDNA_exon_boundary e_start="89488" e_stop="89473" e_length="16"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89472" i_stop="89181" i_length="292"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89180" e_stop="88797" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89488" stop="89473"/>
              <exon start="89180" stop="88797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221023" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89488" stop="89473"/>
              <exon start="89180" stop="88805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220870" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTATTTTCTCTAAT : TATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTT</gDNA_template>
            <first_frame> Y  Y  F  L  *   : L  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  </first_frame>
            <second_frame>  I  I  F  S  N  :  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F </second_frame>
            <third_frame>   L  F  S  L  I :   I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88797"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="92281" e_stop="92265"/>
            <exon e_start="91868" e_stop="91799"/>
            <exon e_start="89291" e_stop="88695"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.729" acc_prob="0.711" e_score="0.529"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.500"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.529">
            <gDNA_exon_boundary e_start="92281" e_stop="92265" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.729" acc_prob="0.711">
            <gDNA_intron_boundary i_start="92264" i_stop="91869" i_length="396"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="91868" e_stop="91799" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91798" i_stop="89292" i_length="2507"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="89291" e_stop="88695" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92281" stop="92265"/>
              <exon start="91868" stop="91799"/>
              <exon start="89291" stop="88695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737267" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89289" stop="89009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284749" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTTCTGCACCAGACT : GTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTT : TTTTTTGGATGCATAGTCGAATTCAAATGCAAAAGAAAACAGAGATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTT</gDNA_template>
            <first_frame> A  F  C  T  R  L :   L  C  L  R  A  T  F  S  I  C  W  L  F  T  L  Q  *  L  I  L  I  N  F  :  F  F  G  C  I  V  E  F  K  C  K  R  K  Q  R  *  Y  *  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L  L  F </first_frame>
            <second_frame>  L  S  A  P  D   : C  C  V  *  G  L  L  S  P  F  A  G  F  L  L  Y  N  S  *  F  *  L  I  F :   F  L  D  A  *  S  N  S  N  A  K  E  N  R  D  S  T  S  N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V  C  C   </second_frame>
            <third_frame>   F  L  H  Q  T  :  V  V  F  E  G  Y  F  L  H  L  L  A  F  Y  F  T  I  V  N  F  D  *  F   : F  F  W  M  H  S  R  I  Q  M  Q  K  K  T  E  I  V  L  V  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  V  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="89486" e_stop="89473"/>
            <exon e_start="89247" e_stop="88698"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.643"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.643">
            <gDNA_exon_boundary e_start="89486" e_stop="89473" e_length="14"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89472" i_stop="89248" i_length="225"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="89247" e_stop="88698" e_length="550"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89486" stop="89473"/>
              <exon start="89247" stop="88698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733322" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTCTCTAAT : ATAGTACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTG</gDNA_template>
            <first_frame> L  F  S  L  I :   *  Y  *  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L  L </first_frame>
            <second_frame>  Y  F  L  *   : Y  S  T  S  N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V  C   </second_frame>
            <third_frame>   I  F  S  N  :  I  V  L  V  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="90133" e_stop="90098"/>
            <exon e_start="89243" e_stop="88648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.150" acc_prob="0.000" e_score="0.556"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.556">
            <gDNA_exon_boundary e_start="90133" e_stop="90098" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.150" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90097" i_stop="89244" i_length="854"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="89243" e_stop="88648" e_length="596"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90133" stop="90098"/>
              <exon start="89243" stop="88648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717807" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTATTTTTACTTTATATATTCTCATCATCGCTTG : TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTTGATGAAATGCAATGCAAATTTGGGTGTGTTGAGGAGTATATGTGGTT</gDNA_template>
            <first_frame> Y  Y  F  Y  F  I  Y  S  H  H  R  L  :  Y  *  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L  L  F  D  E  M  Q  C  K  F  G  C  V  E  E  Y  M  W   </first_frame>
            <second_frame>  I  I  F  T  L  Y  I  L  I  I  A  C :   T  S  N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V  C  C  L  M  K  C  N  A  N  L  G  V  L  R  S  I  C  G  </second_frame>
            <third_frame>   L  F  L  L  Y  I  F  S  S  S  L   : V  L  V  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  V  V  *  *  N  A  M  Q  I  W  V  C  *  G  V  Y  V  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="90147" e_stop="90098"/>
            <exon e_start="89486" e_stop="89473"/>
            <exon e_start="89237" e_stop="88699"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.150" acc_prob="0.000" e_score="0.520"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.643"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.520">
            <gDNA_exon_boundary e_start="90147" e_stop="90098" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="0.150" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90097" i_stop="89487" i_length="611"/>
          </intron>
          <exon e_serial="2" e_score="0.643">
            <gDNA_exon_boundary e_start="89486" e_stop="89473" e_length="14"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89472" i_stop="89238" i_length="235"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="89237" e_stop="88699" e_length="539"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90147" stop="90098"/>
              <exon start="89486" stop="89473"/>
              <exon start="89237" stop="88699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735722" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTG : TTATTTTCTCTAAT : TAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTT</gDNA_template>
            <first_frame> P  K  F  P  T  I  I  F  T  L  Y  I  L  I  I  A  C :   Y  F  L  *   : L  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  V </first_frame>
            <second_frame>  Q  N  S  P  L  L  F  L  L  Y  I  F  S  S  S  L   : V  I  F  S  N  :  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L   </second_frame>
            <third_frame>   K  I  P  H  Y  Y  F  Y  F  I  Y  S  H  H  R  L  :  L  F  S  L  I :   N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="90183" e_stop="90098"/>
            <exon e_start="89488" e_stop="89473"/>
            <exon e_start="89231" e_stop="88701"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.150" acc_prob="0.000" e_score="0.419"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.625"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.419">
            <gDNA_exon_boundary e_start="90183" e_stop="90098" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.150" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90097" i_stop="89489" i_length="609"/>
          </intron>
          <exon e_serial="2" e_score="0.625">
            <gDNA_exon_boundary e_start="89488" e_stop="89473" e_length="16"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="89472" i_stop="89232" i_length="241"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="89231" e_stop="88701" e_length="531"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90183" stop="90098"/>
              <exon start="89488" stop="89473"/>
              <exon start="89231" stop="88701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732195" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTCTCGTGACCATAATATATATGAAAGCGTCATTCCAAAATTCCCCACTATTATTTTTACTTTATATATTCTCATCATCGCTTG : TATTATTTTCTCTAAT : TTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</gDNA_template>
            <first_frame> H  S  R  D  H  N  I  Y  E  S  V  I  P  K  F  P  T  I  I  F  T  L  Y  I  L  I  I  A  C :   I  I  F  S  N  :  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L </first_frame>
            <second_frame>  I  L  V  T  I  I  Y  M  K  A  S  F  Q  N  S  P  L  L  F  L  L  Y  I  F  S  S  S  L   : V  L  F  S  L  I :   L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V   </second_frame>
            <third_frame>   F  S  *  P  *  Y  I  *  K  R  H  S  K  I  P  H  Y  Y  F  Y  F  I  Y  S  H  H  R  L  :  Y  Y  F  L  *   : F  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="92280" e_stop="92265"/>
            <exon e_start="91868" e_stop="91797"/>
            <exon e_start="89237" e_stop="88701"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.729" acc_prob="0.711" e_score="0.500"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.514"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.500">
            <gDNA_exon_boundary e_start="92280" e_stop="92265" e_length="16"/>
          </exon>
          <intron i_serial="1" don_prob="0.729" acc_prob="0.711">
            <gDNA_intron_boundary i_start="92264" i_stop="91869" i_length="396"/>
          </intron>
          <exon e_serial="2" e_score="0.514">
            <gDNA_exon_boundary e_start="91868" e_stop="91797" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91796" i_stop="89238" i_length="2559"/>
          </intron>
          <exon e_serial="3" e_score="0.994">
            <gDNA_exon_boundary e_start="89237" e_stop="88701" e_length="537"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92280" stop="92265"/>
              <exon start="91868" stop="91797"/>
              <exon start="89237" stop="88701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734048" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="8" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTCTGCACCAGACT : GTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTTTG : TAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</gDNA_template>
            <first_frame> L  S  A  P  D   : C  C  V  *  G  L  L  S  P  F  A  G  F  L  L  Y  N  S  *  F  *  L  I  F   : V  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  </first_frame>
            <second_frame>  F  L  H  Q  T  :  V  V  F  E  G  Y  F  L  H  L  L  A  F  Y  F  T  I  V  N  F  D  *  F  L  :  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L </second_frame>
            <third_frame>   F  C  T  R  L :   L  C  L  R  A  T  F  S  I  C  W  L  F  T  L  Q  *  L  I  L  I  N  F  C :   N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="8" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="93591" e_stop="93492"/>
            <exon e_start="90773" e_stop="90767"/>
            <exon e_start="89243" e_stop="88644"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.639" acc_prob="0.427" e_score="0.470"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.714"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.470">
            <gDNA_exon_boundary e_start="93591" e_stop="93492" e_length="100"/>
          </exon>
          <intron i_serial="1" don_prob="0.639" acc_prob="0.427">
            <gDNA_intron_boundary i_start="93491" i_stop="90774" i_length="2718"/>
          </intron>
          <exon e_serial="2" e_score="0.714">
            <gDNA_exon_boundary e_start="90773" e_stop="90767" e_length="7"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90766" i_stop="89244" i_length="1523"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89243" e_stop="88644" e_length="600"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93591" stop="93492"/>
              <exon start="90773" stop="90767"/>
              <exon start="89243" stop="88644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712137" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="9" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAACGTGACAGTCAATTTTCCACACATTAGCAGTTTTAGAATGACTCTTCCTAATCCCTTCCCTCTCTTCCTCTTCTTCTTCTCATTTTCTCATATTA : TTAATTT : TACTAGTAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTGTTGTTTGATGAAATGCAATGCAAATTTGGGTGTGTTGAGGAGTATATGTGGTTATTG</gDNA_template>
            <first_frame> E  N  V  T  V  N  F  P  H  I  S  S  F  R  M  T  L  P  N  P  F  P  L  F  L  F  F  F  S  F  S  H  I   : I  N  F :   T  S  N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V  C  C  L  M  K  C  N  A  N  L  G  V  L  R  S  I  C  G  Y   </first_frame>
            <second_frame>  R  T  *  Q  S  I  F  H  T  L  A  V  L  E  *  L  F  L  I  P  S  L  S  S  S  S  S  S  H  F  L  I  L  :  L  I   : L  L  V  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  V  V  *  *  N  A  M  Q  I  W  V  C  *  G  V  Y  V  V  I  </second_frame>
            <third_frame>   E  R  D  S  Q  F  S  T  H  *  Q  F  *  N  D  S  S  *  S  L  P  S  L  P  L  L  L  L  I  F  S  Y  Y :   *  F  :  Y  *  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L  L  F  D  E  M  Q  C  K  F  G  C  V  E  E  Y  M  W  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="9" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="10">
          <exon_coordinates>
            <exon e_start="95126" e_stop="95105"/>
            <exon e_start="91868" e_stop="91798"/>
            <exon e_start="89237" e_stop="88701"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.711" e_score="0.591"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.521"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.591">
            <gDNA_exon_boundary e_start="95126" e_stop="95105" e_length="22"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.711">
            <gDNA_intron_boundary i_start="95104" i_stop="91869" i_length="3236"/>
          </intron>
          <exon e_serial="2" e_score="0.521">
            <gDNA_exon_boundary e_start="91868" e_stop="91798" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91797" i_stop="89238" i_length="2560"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="89237" e_stop="88701" e_length="537"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95126" stop="95105"/>
              <exon start="91868" stop="91798"/>
              <exon start="89237" stop="88701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738149" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="10" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTTTTTCCTATCTTATTATA : GTTGTGTTTGAGGGCTACTTTCTCCATTTGCTGGCTTTTTACTTTACAATAGTTAATTTTGATTAATTTTT : TAATTCTTTGGCACAAAACCACATGAATTTCACATAAAATCAGTTAACAAAAACACATATAGTAAATATATTTTTGTTTGATATTCAGCCAAAGAAACTGGGATCATATCCATTGCTAGAAGTAGCAAGGATATAATAAGCAACAATATGTCCAATAGATCCCCAAGCAAGCACATCAACAATATTGAATCCAACTGGATCATTTGATTTTAACAAACTTATATATTCCTTAGCCCTAACATCTCCAGCTTCAAAGTGAGAAATTCCATTCTGAGATGGCACCTGTTTCGCTACATTTTCTCTCTGGAAATTGAAGAAAACGAACCTTCCAAGGAAAAGCGAAAGCCCAGTGCTCAAACTGATGACAACGGATGGATTGAGTTCAGCTTTCACAGCGAGATTTCGGGGTTTTTTGGTGATAGGTTTGAAGGCGATGGGTTTGTTGAGGAAGAGGGAAGAGTCGGTGGGTTTGTTGAGAGGTCTGAGACCTTGGAAAGTTGGTGCAGAAAACAGAGCTGATGCCATTTTTTGAGTTTG</gDNA_template>
            <first_frame> L  F  F  L  S  Y  Y   : S  C  V  *  G  L  L  S  P  F  A  G  F  L  L  Y  N  S  *  F  *  L  I  F  :  *  F  F  G  T  K  P  H  E  F  H  I  K  S  V  N  K  N  T  Y  S  K  Y  I  F  V  *  Y  S  A  K  E  T  G  I  I  S  I  A  R  S  S  K  D  I  I  S  N  N  M  S  N  R  S  P  S  K  H  I  N  N  I  E  S  N  W  I  I  *  F  *  Q  T  Y  I  F  L  S  P  N  I  S  S  F  K  V  R  N  S  I  L  R  W  H  L  F  R  Y  I  F  S  L  E  I  E  E  N  E  P  S  K  E  K  R  K  P  S  A  Q  T  D  D  N  G  W  I  E  F  S  F  H  S  E  I  S  G  F  F  G  D  R  F  E  G  D  G  F  V  E  E  E  G  R  V  G  G  F  V  E  R  S  E  T  L  E  S  W  C  R  K  Q  S  *  C  H  F  L  S  L </first_frame>
            <second_frame>  C  F  S  Y  L  I  I  :  V  V  F  E  G  Y  F  L  H  L  L  A  F  Y  F  T  I  V  N  F  D  *  F  F :   N  S  L  A  Q  N  H  M  N  F  T  *  N  Q  L  T  K  T  H  I  V  N  I  F  L  F  D  I  Q  P  K  K  L  G  S  Y  P  L  L  E  V  A  R  I  *  *  A  T  I  C  P  I  D  P  Q  A  S  T  S  T  I  L  N  P  T  G  S  F  D  F  N  K  L  I  Y  S  L  A  L  T  S  P  A  S  K  *  E  I  P  F  *  D  G  T  C  F  A  T  F  S  L  W  K  L  K  K  T  N  L  P  R  K  S  E  S  P  V  L  K  L  M  T  T  D  G  L  S  S  A  F  T  A  R  F  R  G  F  L  V  I  G  L  K  A  M  G  L  L  R  K  R  E  E  S  V  G  L  L  R  G  L  R  P  W  K  V  G  A  E  N  R  A  D  A  I  F  *  V   </second_frame>
            <third_frame>   V  F  P  I  L  L  * :   L  C  L  R  A  T  F  S  I  C  W  L  F  T  L  Q  *  L  I  L  I  N  F   : L  I  L  W  H  K  T  T  *  I  S  H  K  I  S  *  Q  K  H  I  *  *  I  Y  F  C  L  I  F  S  Q  R  N  W  D  H  I  H  C  *  K  *  Q  G  Y  N  K  Q  Q  Y  V  Q  *  I  P  K  Q  A  H  Q  Q  Y  *  I  Q  L  D  H  L  I  L  T  N  L  Y  I  P  *  P  *  H  L  Q  L  Q  S  E  K  F  H  S  E  M  A  P  V  S  L  H  F  L  S  G  N  *  R  K  R  T  F  Q  G  K  A  K  A  Q  C  S  N  *  *  Q  R  M  D  *  V  Q  L  S  Q  R  D  F  G  V  F  W  *  *  V  *  R  R  W  V  C  *  G  R  G  K  S  R  W  V  C  *  E  V  *  D  L  G  K  L  V  Q  K  T  E  L  M  P  F  F  E  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="10" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89024" stop="88719"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTYIFLSPNISSFKVRNSILRWHLFRYIFSLEIEENEPSKEKRKPSAQTDDNGWIEFSFHSEISGFFGDRFEGDGFVEEEGRVGGFVERSETLESWCRKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="10" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88963" stop="88706"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGTCFATFSLWKLKKTNLPRKSESPVLKLMTTDGLSSAFTARFRGFLVIGLKAMGLLRKREESVGLLRGLRPWKVGAENRADAIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="99663" PGL_stop="95156"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99663" e_stop="99508"/>
            <exon e_start="98465" e_stop="98174"/>
            <exon e_start="96531" e_stop="95410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.943" e_score="0.994"/>
          <exon-intron don_prob="0.997" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="99663" e_stop="99508" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.943">
            <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98465" e_stop="98174" e_length="292"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.974">
            <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="96531" e_stop="95410" e_length="1122"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99663" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99621" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99621" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99602" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99584" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98321" stop="98174"/>
              <exon start="96531" stop="96233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96324" stop="95634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96250" stop="95628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96250" stop="95634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96250" stop="95660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96249" stop="95628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96249" stop="95634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96076" stop="95410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321297" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGAGATAATATACAAATTGGCTAGAAACAATAAAGATAGTTGCAACAGTTCAGGCGGCTATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAG : GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTG : AAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTTCTCTCTCTTTTTTTCTTCCACTCCCTATTATCAACATCGTCATCCTTCAATGTTGAAAGTTAGATTAGTTTGTTTTTTAGATGTCTATAGATAGCTGAAATACCTACTTCTCATTTTGCTGAGTCTGTATTCAAGGGTAATCATAGAAGATGATCCGTTTTTTGCTTCTGTAAAAGGCTGTGCACTTTGAAGTTTTTTAACCTGGTCTCATATCAATACGACTTTAGACATTTCTGTTCGTGTGTGATGAACTATGTAATGGTCTAATTGGATTGTTGGAGTTGCAGAAACCTATACAACTTCAGACATTTCGGTTTGAAGTTGAAGCAAAAATGGTATGCACATGAAACATTCAACCACATGGTTGTTGAAGCTCATGTAGAAAAGCAAGCCTGAACTT</gDNA_template>
            <first_frame> R  R  *  Y  T  N  W  L  E  T  I  K  I  V  A  T  V  Q  A  A  I  N  F  P  N  L  F  P  I  L  G  F  P  *  S  Q  F  S  S  N  F  S  W  K  S  S  R  I  M  N  E  K  :  G  D  F  A  T  S  N  G  T  K  G  E  R  S  M  N  Y  D  E  E  S  S  D  E  A  Q  D  R  E  R  P  I  G  E  E  L  G  A  G  L  E  R  G  N  D  R  E  S  E  N  V  S  K  E  D  L  A  A  E  S  P  W  D  V  N  E  E  K  S  E  N  H  G  S  S  T  D  H  E  P  L  T  E  S  I  F  N  F  H  A  A  Q  E  A  L  A  S   : E  I  Q  K  F  K  E  I  G  K  D  T  N  F  G  H  S  L  E  D  V  G  I  P  S  N  F  T  S  D  D  S  D  F  P  R  S  S  T  S  V  L  S  Q  N  R  D  G  A  Q  S  S  L  N  S  L  E  S  E  V  Y  S  L  K  Q  N  I  L  L  L  Q  N  Q  V  Q  E  A  A  D  L  A  K  S  K  E  A  R  V  T  E  L  E  A  I  L  S  S  S  S  K  S  E  E  E  T  T  E  G  E  F  E  S  L  F  R  L  K  I  E  A  E  V  Q  Y  V  A  L  S  T  T  A  Q  K  L  R  S  A  A  V  Y  Q  L  T  L  L  E  E  Q  K  T  L  A  S  E  Q  A  Q  M  V  H  V  L  G  D  A  E  A  K  A  V  V  L  K  T  Q  T  K  K  L  E  T  Y  C  E  D  L  A  S  T  A  E  K  L  K  L  Q  K  K  V  C  K  Y  S  S  C  F  F  I  Q  L  V  L  L  A  V  V  V  G  L  F  L  M  Q  I  S  P  D  H  A  E  L  V  P  T  *  C  *  R  S  F  F  L  S  L  F  F  F  H  S  L  L  S  T  S  S  S  F  N  V  E  S  *  I  S  L  F  F  R  C  L  *  I  A  E  I  P  T  S  H  F  A  E  S  V  F  K  G  N  H  R  R  *  S  V  F  C  F  C  K  R  L  C  T  L  K  F  F  N  L  V  S  Y  Q  Y  D  F  R  H  F  C  S  C  V  M  N  Y  V  M  V  *  L  D  C  W  S  C  R  N  L  Y  N  F  R  H  F  G  L  K  L  K  Q  K  W  Y  A  H  E  T  F  N  H  M  V  V  E  A  H  V  E  K  Q  A  *  T  </first_frame>
            <second_frame>  G  D  N  I  Q  I  G  *  K  Q  *  R  *  L  Q  Q  F  R  R  L  L  I  S  Q  I  C  S  Q  F  *  G  F  H  N  L  N  S  L  R  I  S  L  G  N  P  A  E  *  *  M  K  R :   V  T  L  L  Q  V  M  V  Q  K  V  K  G  Q  *  T  M  M  K  N  P  V  M  K  L  R  T  E  K  G  Q  L  V  R  N  L  G  L  V  S  R  E  G  M  I  G  S  L  K  M  C  Q  K  K  I  *  L  L  N  L  R  G  M  L  M  K  R  R  V  R  I  T  V  H  P  L  I  T  S  L  *  R  N  L  S  S  T  S  M  L  L  K  K  L  L  L  V  :  K  F  R  N  S  K  K  *  G  K  I  L  T  L  V  I  H  L  R  M  L  V  Y  L  Q  I  S  R  Q  M  T  Q  I  F  L  D  Q  A  H  P  C  C  H  R  T  E  M  V  L  K  V  L  L  T  P  W  S  L  K  C  I  A  *  S  R  I  Y  Y  C  C  K  T  R  F  R  R  Q  L  T  W  L  N  P  R  K  Q  E  L  L  N  L  K  P  F  *  V  V  A  Q  R  V  K  K  R  L  L  K  V  S  S  R  V  S  S  D  *  K  L  K  L  K  F  S  M  W  H  C  Q  Q  Q  H  K  S  *  E  V  Q  Q  Y  I  N  L  P  S  W  K  N  R  R  H  *  L  Q  N  K  H  R  W  C  T  C  *  E  M  P  K  Q  R  L  *  C  S  R  H  K  P  R  S  W  K  L  T  V  K  I  *  Q  A  L  P  K  S  *  S  Y  R  R  K  S  V  S  T  V  R  V  F  S  Y  S  W  C  C  W  L  L  L  L  D  C  F  *  C  R  Y  L  L  I  M  L  N  L  Y  P  P  N  V  R  E  V  S  F  S  L  F  F  S  S  T  P  Y  Y  Q  H  R  H  P  S  M  L  K  V  R  L  V  C  F  L  D  V  Y  R  *  L  K  Y  L  L  L  I  L  L  S  L  Y  S  R  V  I  I  E  D  D  P  F  F  A  S  V  K  G  C  A  L  *  S  F  L  T  W  S  H  I  N  T  T  L  D  I  S  V  R  V  *  *  T  M  *  W  S  N  W  I  V  G  V  A  E  T  Y  T  T  S  D  I  S  V  *  S  *  S  K  N  G  M  H  M  K  H  S  T  T  W  L  L  K  L  M  *  K  S  K  P  E  L </second_frame>
            <third_frame>   E  I  I  Y  K  L  A  R  N  N  K  D  S  C  N  S  S  G  G  Y  *  F  P  K  F  V  P  N  S  R  V  S  I  I  S  I  L  F  E  F  L  L  E  I  Q  Q  N  N  E  *  K   : G  *  L  C  Y  K  *  W  Y  K  R  *  K  V  N  E  L  *  *  R  I  Q  *  *  S  S  G  Q  R  K  A  N  W  *  G  T  W  G  W  S  R  E  R  E  *  *  G  V  *  K  C  V  K  R  R  S  S  C  *  I  S  V  G  C  *  *  R  E  E  *  E  S  R  F  I  H  *  S  R  A  S  N  G  I  Y  L  Q  L  P  C  C  S  R  S  S  C  *  * :   N  S  E  I  Q  R  N  R  E  R  Y  *  L  W  S  F  T  *  G  C  W  Y  T  F  K  F  H  V  R  *  L  R  F  S  *  I  K  H  I  R  A  V  T  E  Q  R  W  C  S  K  F  S  *  L  L  G  V  *  S  V  *  P  K  A  E  Y  I  T  V  A  K  P  G  S  G  G  S  *  P  G  *  I  Q  G  S  K  S  Y  *  T  *  S  H  F  K  *  *  L  K  E  *  R  R  D  Y  *  R  *  V  R  E  S  L  Q  T  E  N  *  S  *  S  S  V  C  G  I  V  N  N  S  T  K  V  E  K  C  S  S  I  S  T  Y  P  L  G  R  T  E  D  T  S  F  R  T  S  T  D  G  A  R  A  R  R  C  R  S  K  G  C  S  A  Q  D  T  N  Q  E  V  G  N  L  L  *  R  F  S  K  H  C  R  K  A  K  A  T  E  E  S  L  *  V  Q  F  V  F  F  H  T  V  G  V  V  G  C  C  C  W  T  V  S  D  A  D  I  S  *  S  C  *  T  C  T  H  L  M  L  E  K  F  L  S  L  S  F  F  L  P  L  P  I  I  N  I  V  I  L  Q  C  *  K  L  D  *  F  V  F  *  M  S  I  D  S  *  N  T  Y  F  S  F  C  *  V  C  I  Q  G  *  S  *  K  M  I  R  F  L  L  L  *  K  A  V  H  F  E  V  F  *  P  G  L  I  S  I  R  L  *  T  F  L  F  V  C  D  E  L  C  N  G  L  I  G  L  L  E  L  Q  K  P  I  Q  L  Q  T  F  R  F  E  V  E  A  K  M  V  C  T  *  N  I  Q  P  H  G  C  *  S  S  C  R  K  A  S  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99561" stop="99508"/>
                    <exon start="98465" stop="98174"/>
                    <exon start="96531" stop="95828"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1047</number_coding_nucleotides>
                  <number_encoded_amino_acids>349</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQFSSNFSWKSSRIMNEKGDFATSNGTKGERSMNYDEESSDEAQDRERPIGEELGAGLERGNDRESENVSKEDLAAESPWDVNEEKSENHGSSTDHEPLTESIFNFHAAQEALASEIQKFKEIGKDTNFGHSLEDVGIPSNFTSDDSDFPRSSTSVLSQNRDGAQSSLNSLESEVYSLKQNILLLQNQVQEAADLAKSKEARVTELEAILSSSSKSEEETTEGEFESLFRLKIEAEVQYVALSTTAQKLRSAAVYQLTLLEEQKTLASEQAQMVHVLGDAEAKAVVLKTQTKKLETYCEDLASTAEKLKLQKKVCKYSSCFFIQLVLLAVVVGLFLMQISPDHAELVPT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="99663" e_stop="99508"/>
            <exon e_start="98465" e_stop="98174"/>
            <exon e_start="96531" e_stop="95810"/>
            <exon e_start="95175" e_stop="95156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.943" e_score="0.994"/>
          <exon-intron don_prob="0.997" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.664" e_score="0.949"/>
          <exon-only e_score="0.500"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="99663" e_stop="99508" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.943">
            <gDNA_intron_boundary i_start="99507" i_stop="98466" i_length="1042"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98465" e_stop="98174" e_length="292"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.974">
            <gDNA_intron_boundary i_start="98173" i_stop="96532" i_length="1642"/>
          </intron>
          <exon e_serial="3" e_score="0.949">
            <gDNA_exon_boundary e_start="96531" e_stop="95810" e_length="722"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.664">
            <gDNA_intron_boundary i_start="95809" i_stop="95176" i_length="634"/>
          </intron>
          <exon e_serial="4" e_score="0.500">
            <gDNA_exon_boundary e_start="95175" e_stop="95156" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99663" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99621" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99621" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99602" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358010" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99584" stop="99508"/>
              <exon start="98465" stop="98174"/>
              <exon start="96531" stop="96242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98321" stop="98174"/>
              <exon start="96531" stop="96233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98206" stop="98174"/>
              <exon start="96531" stop="95810"/>
              <exon start="95175" stop="95156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424701" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGAGATAATATACAAATTGGCTAGAAACAATAAAGATAGTTGCAACAGTTCAGGCGGCTATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAG : GGTGACTTTGCTACAAGTAATGGTACAAAAGGTGAAAGGTCAATGAACTATGATGAAGAATCCAGTGATGAAGCTCAGGACAGAGAAAGGCCAATTGGTGAGGAACTTGGGGCTGGTCTCGAGAGAGGGAATGATAGGGAGTCTGAAAATGTGTCAAAAGAAGATCTAGCTGCTGAATCTCCGTGGGATGTTAATGAAGAGAAGAGTGAGAATCACGGTTCATCCACTGATCACGAGCCTCTAACGGAATCTATCTTCAACTTCCATGCTGCTCAAGAAGCTCTTGCTAGTG : AAATTCAGAAATTCAAAGAAATAGGGAAAGATACTAACTTTGGTCATTCACTTGAGGATGTTGGTATACCTTCAAATTTCACGTCAGATGACTCAGATTTTCCTAGATCAAGCACATCCGTGCTGTCACAGAACAGAGATGGTGCTCAAAGTTCTCTTAACTCCTTGGAGTCTGAAGTGTATAGCCTAAAGCAGAATATATTACTGTTGCAAAACCAGGTTCAGGAGGCAGCTGACCTGGCTAAATCCAAGGAAGCAAGAGTTACTGAACTTGAAGCCATTTTAAGTAGTAGCTCAAAGAGTGAAGAAGAGACTACTGAAGGTGAGTTCGAGAGTCTCTTCAGACTGAAAATTGAAGCTGAAGTTCAGTATGTGGCATTGTCAACAACAGCACAAAAGTTGAGAAGTGCAGCAGTATATCAACTTACCCTCTTGGAAGAACAGAAGACACTAGCTTCAGAACAAGCACAGATGGTGCACGTGCTAGGAGATGCCGAAGCAAAGGCTGTAGTGCTCAAGACACAAACCAAGAAGTTGGAAACTTACTGTGAAGATTTAGCAAGCACTGCCGAAAAGCTAAAGCTACAGAAGAAAGTCTGTAAGTACAGTTCGTGTTTTTTCATACAGTTGGTGTTGTTGGCTGTTGTTGTTGGACTGTTTCTGATGCAGATATCTCCTGATCATGCTGAACTTGTACCCACCTAATGTTAGAGAAGTTTCTTT : AAGGAGAATACAATCTGGCC</gDNA_template>
            <first_frame> R  R  *  Y  T  N  W  L  E  T  I  K  I  V  A  T  V  Q  A  A  I  N  F  P  N  L  F  P  I  L  G  F  P  *  S  Q  F  S  S  N  F  S  W  K  S  S  R  I  M  N  E  K  :  G  D  F  A  T  S  N  G  T  K  G  E  R  S  M  N  Y  D  E  E  S  S  D  E  A  Q  D  R  E  R  P  I  G  E  E  L  G  A  G  L  E  R  G  N  D  R  E  S  E  N  V  S  K  E  D  L  A  A  E  S  P  W  D  V  N  E  E  K  S  E  N  H  G  S  S  T  D  H  E  P  L  T  E  S  I  F  N  F  H  A  A  Q  E  A  L  A  S   : E  I  Q  K  F  K  E  I  G  K  D  T  N  F  G  H  S  L  E  D  V  G  I  P  S  N  F  T  S  D  D  S  D  F  P  R  S  S  T  S  V  L  S  Q  N  R  D  G  A  Q  S  S  L  N  S  L  E  S  E  V  Y  S  L  K  Q  N  I  L  L  L  Q  N  Q  V  Q  E  A  A  D  L  A  K  S  K  E  A  R  V  T  E  L  E  A  I  L  S  S  S  S  K  S  E  E  E  T  T  E  G  E  F  E  S  L  F  R  L  K  I  E  A  E  V  Q  Y  V  A  L  S  T  T  A  Q  K  L  R  S  A  A  V  Y  Q  L  T  L  L  E  E  Q  K  T  L  A  S  E  Q  A  Q  M  V  H  V  L  G  D  A  E  A  K  A  V  V  L  K  T  Q  T  K  K  L  E  T  Y  C  E  D  L  A  S  T  A  E  K  L  K  L  Q  K  K  V  C  K  Y  S  S  C  F  F  I  Q  L  V  L  L  A  V  V  V  G  L  F  L  M  Q  I  S  P  D  H  A  E  L  V  P  T  *  C  *  R  S  F  F  :  K  E  N  T  I  W   </first_frame>
            <second_frame>  G  D  N  I  Q  I  G  *  K  Q  *  R  *  L  Q  Q  F  R  R  L  L  I  S  Q  I  C  S  Q  F  *  G  F  H  N  L  N  S  L  R  I  S  L  G  N  P  A  E  *  *  M  K  R :   V  T  L  L  Q  V  M  V  Q  K  V  K  G  Q  *  T  M  M  K  N  P  V  M  K  L  R  T  E  K  G  Q  L  V  R  N  L  G  L  V  S  R  E  G  M  I  G  S  L  K  M  C  Q  K  K  I  *  L  L  N  L  R  G  M  L  M  K  R  R  V  R  I  T  V  H  P  L  I  T  S  L  *  R  N  L  S  S  T  S  M  L  L  K  K  L  L  L  V  :  K  F  R  N  S  K  K  *  G  K  I  L  T  L  V  I  H  L  R  M  L  V  Y  L  Q  I  S  R  Q  M  T  Q  I  F  L  D  Q  A  H  P  C  C  H  R  T  E  M  V  L  K  V  L  L  T  P  W  S  L  K  C  I  A  *  S  R  I  Y  Y  C  C  K  T  R  F  R  R  Q  L  T  W  L  N  P  R  K  Q  E  L  L  N  L  K  P  F  *  V  V  A  Q  R  V  K  K  R  L  L  K  V  S  S  R  V  S  S  D  *  K  L  K  L  K  F  S  M  W  H  C  Q  Q  Q  H  K  S  *  E  V  Q  Q  Y  I  N  L  P  S  W  K  N  R  R  H  *  L  Q  N  K  H  R  W  C  T  C  *  E  M  P  K  Q  R  L  *  C  S  R  H  K  P  R  S  W  K  L  T  V  K  I  *  Q  A  L  P  K  S  *  S  Y  R  R  K  S  V  S  T  V  R  V  F  S  Y  S  W  C  C  W  L  L  L  L  D  C  F  *  C  R  Y  L  L  I  M  L  N  L  Y  P  P  N  V  R  E  V  S  L :   R  R  I  Q  S  G  </second_frame>
            <third_frame>   E  I  I  Y  K  L  A  R  N  N  K  D  S  C  N  S  S  G  G  Y  *  F  P  K  F  V  P  N  S  R  V  S  I  I  S  I  L  F  E  F  L  L  E  I  Q  Q  N  N  E  *  K   : G  *  L  C  Y  K  *  W  Y  K  R  *  K  V  N  E  L  *  *  R  I  Q  *  *  S  S  G  Q  R  K  A  N  W  *  G  T  W  G  W  S  R  E  R  E  *  *  G  V  *  K  C  V  K  R  R  S  S  C  *  I  S  V  G  C  *  *  R  E  E  *  E  S  R  F  I  H  *  S  R  A  S  N  G  I  Y  L  Q  L  P  C  C  S  R  S  S  C  *  * :   N  S  E  I  Q  R  N  R  E  R  Y  *  L  W  S  F  T  *  G  C  W  Y  T  F  K  F  H  V  R  *  L  R  F  S  *  I  K  H  I  R  A  V  T  E  Q  R  W  C  S  K  F  S  *  L  L  G  V  *  S  V  *  P  K  A  E  Y  I  T  V  A  K  P  G  S  G  G  S  *  P  G  *  I  Q  G  S  K  S  Y  *  T  *  S  H  F  K  *  *  L  K  E  *  R  R  D  Y  *  R  *  V  R  E  S  L  Q  T  E  N  *  S  *  S  S  V  C  G  I  V  N  N  S  T  K  V  E  K  C  S  S  I  S  T  Y  P  L  G  R  T  E  D  T  S  F  R  T  S  T  D  G  A  R  A  R  R  C  R  S  K  G  C  S  A  Q  D  T  N  Q  E  V  G  N  L  L  *  R  F  S  K  H  C  R  K  A  K  A  T  E  E  S  L  *  V  Q  F  V  F  F  H  T  V  G  V  V  G  C  C  C  W  T  V  S  D  A  D  I  S  *  S  C  *  T  C  T  H  L  M  L  E  K  F  L   : *  G  E  Y  N  L  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99561" stop="99508"/>
                    <exon start="98465" stop="98174"/>
                    <exon start="96531" stop="95828"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1047</number_coding_nucleotides>
                  <number_encoded_amino_acids>349</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQFSSNFSWKSSRIMNEKGDFATSNGTKGERSMNYDEESSDEAQDRERPIGEELGAGLERGNDRESENVSKEDLAAESPWDVNEEKSENHGSSTDHEPLTESIFNFHAAQEALASEIQKFKEIGKDTNFGHSLEDVGIPSNFTSDDSDFPRSSTSVLSQNRDGAQSSLNSLESEVYSLKQNILLLQNQVQEAADLAKSKEARVTELEAILSSSSKSEEETTEGEFESLFRLKIEAEVQYVALSTTAQKLRSAAVYQLTLLEEQKTLASEQAQMVHVLGDAEAKAVVLKTQTKKLETYCEDLASTAEKLKLQKKVCKYSSCFFIQLVLLAVVVGLFLMQISPDHAELVPT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="99604" e_stop="98817"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="99604" e_stop="98817" e_length="788"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99604" stop="98817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99596" stop="99055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266145" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTAATTTCCCAAATTTGTTCCCAATTCTAGGGTTTCCATAATCTCAATTCTCTTCGAATTTCTCTTGGAAATCCAGCAGAATAATGAATGAAAAGGTACGCCCAGTTACTTAATTGCTTCTCCATTTCCTAATTTTTTGCATCTGCAGTACAAGTTTTTACAATGAACGAATTCAATTTTGTTCAATATGATGATTTTTCAAGCTGCAAATTGTCGAAGCAATCATAATTGATTTTGTCGAGAAATTTTGTTTCAATTGTTATCCGTCAGCTGGAATGATGGTTGGTAGTTCTCGATCTTGATCTGGGTTCGTAAAAAAGGTTTAATTTTAATATATATTTGTCTCTAGTTATGGACTTGGAAGAACAAAATACAGCTAATAATAAGGAAATGATCACACCACCAATATTTGAAAATGCTAATCAAAGCAAGGTAGAAAGTAGTGATGGGTCTAGTCCTCCTGGGGATAATAGCAGTAATAATAATTTGGATGATGTGAAAGGCAAGGGAATTGACATTAAAGAGGTTGAGGATTATTCAACTCCCCTGGTGAAATCCTCTCCAATAACTAAGGGGTTTGGGTTGAAAAAATGGAAAAGGATGAAGCGGGATGCGCAGCGCCAGGATGGGGATAGTAGTGTTAACAGCGGTAAGCTGTTGAAACGGGGTTTGGCGAGTGAGTTTGCTAATGCAGAAAAACCTGCAACTTTTGCTGTGGGAAGGATCCAAAAAAGTGATGGATCTGTTTCATCAACGAATGCAGTATTCATGAATCCTGGAGTTCTG</gDNA_template>
            <first_frame> Y  *  F  P  K  F  V  P  N  S  R  V  S  I  I  S  I  L  F  E  F  L  L  E  I  Q  Q  N  N  E  *  K  G  T  P  S  Y  L  I  A  S  P  F  P  N  F  L  H  L  Q  Y  K  F  L  Q  *  T  N  S  I  L  F  N  M  M  I  F  Q  A  A  N  C  R  S  N  H  N  *  F  C  R  E  I  L  F  Q  L  L  S  V  S  W  N  D  G  W  *  F  S  I  L  I  W  V  R  K  K  G  L  I  L  I  Y  I  C  L  *  L  W  T  W  K  N  K  I  Q  L  I  I  R  K  *  S  H  H  Q  Y  L  K  M  L  I  K  A  R  *  K  V  V  M  G  L  V  L  L  G  I  I  A  V  I  I  I  W  M  M  *  K  A  R  E  L  T  L  K  R  L  R  I  I  Q  L  P  W  *  N  P  L  Q  *  L  R  G  L  G  *  K  N  G  K  G  *  S  G  M  R  S  A  R  M  G  I  V  V  L  T  A  V  S  C  *  N  G  V  W  R  V  S  L  L  M  Q  K  N  L  Q  L  L  L  W  E  G  S  K  K  V  M  D  L  F  H  Q  R  M  Q  Y  S  *  I  L  E  F   </first_frame>
            <second_frame>  I  N  F  P  N  L  F  P  I  L  G  F  P  *  S  Q  F  S  S  N  F  S  W  K  S  S  R  I  M  N  E  K  V  R  P  V  T  *  L  L  L  H  F  L  I  F  C  I  C  S  T  S  F  Y  N  E  R  I  Q  F  C  S  I  *  *  F  F  K  L  Q  I  V  E  A  I  I  I  D  F  V  E  K  F  C  F  N  C  Y  P  S  A  G  M  M  V  G  S  S  R  S  *  S  G  F  V  K  K  V  *  F  *  Y  I  F  V  S  S  Y  G  L  G  R  T  K  Y  S  *  *  *  G  N  D  H  T  T  N  I  *  K  C  *  S  K  Q  G  R  K  *  *  W  V  *  S  S  W  G  *  *  Q  *  *  *  F  G  *  C  E  R  Q  G  N  *  H  *  R  G  *  G  L  F  N  S  P  G  E  I  L  S  N  N  *  G  V  W  V  E  K  M  E  K  D  E  A  G  C  A  A  P  G  W  G  *  *  C  *  Q  R  *  A  V  E  T  G  F  G  E  *  V  C  *  C  R  K  T  C  N  F  C  C  G  K  D  P  K  K  *  W  I  C  F  I  N  E  C  S  I  H  E  S  W  S  S  </second_frame>
            <third_frame>   L  I  S  Q  I  C  S  Q  F  *  G  F  H  N  L  N  S  L  R  I  S  L  G  N  P  A  E  *  *  M  K  R  Y  A  Q  L  L  N  C  F  S  I  S  *  F  F  A  S  A  V  Q  V  F  T  M  N  E  F  N  F  V  Q  Y  D  D  F  S  S  C  K  L  S  K  Q  S  *  L  I  L  S  R  N  F  V  S  I  V  I  R  Q  L  E  *  W  L  V  V  L  D  L  D  L  G  S  *  K  R  F  N  F  N  I  Y  L  S  L  V  M  D  L  E  E  Q  N  T  A  N  N  K  E  M  I  T  P  P  I  F  E  N  A  N  Q  S  K  V  E  S  S  D  G  S  S  P  P  G  D  N  S  S  N  N  N  L  D  D  V  K  G  K  G  I  D  I  K  E  V  E  D  Y  S  T  P  L  V  K  S  S  P  I  T  K  G  F  G  L  K  K  W  K  R  M  K  R  D  A  Q  R  Q  D  G  D  S  S  V  N  S  G  K  L  L  K  R  G  L  A  S  E  F  A  N  A  E  K  P  A  T  F  A  V  G  R  I  Q  K  S  D  G  S  V  S  S  T  N  A  V  F  M  N  P  G  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99287" stop="98817"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRFNFNIYLSLVMDLEEQNTANNKEMITPPIFENANQSKVESSDGSSPPGDNSSNNNLDDVKGKGIDIKEVEDYSTPLVKSSPITKGFGLKKWKRMKRDAQRQDGDSSVNSGKLLKRGLASEFANAEKPATFAVGRIQKSDGSVSSTNAVFMNPGVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="95732" PGL_stop="96459"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95732" e_stop="96459"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="95732" e_stop="96459" e_length="728"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95732" stop="96459"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAACAAACTAATCTAACTTTCAACATTGAAGGATGACGATGTTGATAATAGGGAGTGGAAGAAAAAAAGAGAGAGAAAGAAACTTCTCTAACATTAGGTGGGTACAAGTTCAGCATGATCAGGAGATATCTGCATCAGAAACAGTCCAACAACAACAGCCAACAACACCAACTGTATGAAAAAACACGAACTGTACTTACAGACTTTCTTCTGTAGCTTTAGCTTTTCGGCAGTGCTTGCTAAATCTTCACAGTAAGTTTCCAACTTCTTGGTTTGTGTCTTGAGCACTACAGCCTTTGCTTCGGCATCTCCTAGCACGTGCACCATCTGTGCTTGTTCTGAAGCTAGTGTCTTCTGTTCTTCCAAGAGGGTAAGTTGATATACTGCTGCACTTCTCAACTTTTGTGCTGTTGTTGACAATGCCACATACTGAACTTCAGCTTCAATTTTCAGTCTGAAGAGACTCTCGAACTCACCTTCAGTAGTCTCTTCTTCACTCTTTGAGCTACTACTTAAAATGGCTTCAAGTTCAGTAACTCTTGCTTCCTTGGATTTAGCCAGGTCAGCTGCCTCCTGAACCTGGTTTTGCAACAGTAATATATTCTGCTTTAGGCTATACACTTCAGACTCCAAGGAGTTAAGAGAACTTTGAGCACCATCTCTGTTCTGTGACAGCACGGATGTGCTTGATCTAGGAAAATCTGAGTCATCTGACGTGAAATTTG</gDNA_template>
            <first_frame> K  K  Q  T  N  L  T  F  N  I  E  G  *  R  C  *  *  *  G  V  E  E  K  K  R  E  K  E  T  S  L  T  L  G  G  Y  K  F  S  M  I  R  R  Y  L  H  Q  K  Q  S  N  N  N  S  Q  Q  H  Q  L  Y  E  K  T  R  T  V  L  T  D  F  L  L  *  L  *  L  F  G  S  A  C  *  I  F  T  V  S  F  Q  L  L  G  L  C  L  E  H  Y  S  L  C  F  G  I  S  *  H  V  H  H  L  C  L  F  *  S  *  C  L  L  F  F  Q  E  G  K  L  I  Y  C  C  T  S  Q  L  L  C  C  C  *  Q  C  H  I  L  N  F  S  F  N  F  Q  S  E  E  T  L  E  L  T  F  S  S  L  F  F  T  L  *  A  T  T  *  N  G  F  K  F  S  N  S  C  F  L  G  F  S  Q  V  S  C  L  L  N  L  V  L  Q  Q  *  Y  I  L  L  *  A  I  H  F  R  L  Q  G  V  K  R  T  L  S  T  I  S  V  L  *  Q  H  G  C  A  *  S  R  K  I  *  V  I  *  R  E  I   </first_frame>
            <second_frame>  K  N  K  L  I  *  L  S  T  L  K  D  D  D  V  D  N  R  E  W  K  K  K  R  E  R  K  K  L  L  *  H  *  V  G  T  S  S  A  *  S  G  D  I  C  I  R  N  S  P  T  T  T  A  N  N  T  N  C  M  K  K  H  E  L  Y  L  Q  T  F  F  C  S  F  S  F  S  A  V  L  A  K  S  S  Q  *  V  S  N  F  L  V  C  V  L  S  T  T  A  F  A  S  A  S  P  S  T  C  T  I  C  A  C  S  E  A  S  V  F  C  S  S  K  R  V  S  *  Y  T  A  A  L  L  N  F  C  A  V  V  D  N  A  T  Y  *  T  S  A  S  I  F  S  L  K  R  L  S  N  S  P  S  V  V  S  S  S  L  F  E  L  L  L  K  M  A  S  S  S  V  T  L  A  S  L  D  L  A  R  S  A  A  S  *  T  W  F  C  N  S  N  I  F  C  F  R  L  Y  T  S  D  S  K  E  L  R  E  L  *  A  P  S  L  F  C  D  S  T  D  V  L  D  L  G  K  S  E  S  S  D  V  K  F  </second_frame>
            <third_frame>   K  T  N  *  S  N  F  Q  H  *  R  M  T  M  L  I  I  G  S  G  R  K  K  E  R  E  R  N  F  S  N  I  R  W  V  Q  V  Q  H  D  Q  E  I  S  A  S  E  T  V  Q  Q  Q  Q  P  T  T  P  T  V  *  K  N  T  N  C  T  Y  R  L  S  S  V  A  L  A  F  R  Q  C  L  L  N  L  H  S  K  F  P  T  S  W  F  V  S  *  A  L  Q  P  L  L  R  H  L  L  A  R  A  P  S  V  L  V  L  K  L  V  S  S  V  L  P  R  G  *  V  D  I  L  L  H  F  S  T  F  V  L  L  L  T  M  P  H  T  E  L  Q  L  Q  F  S  V  *  R  D  S  R  T  H  L  Q  *  S  L  L  H  S  L  S  Y  Y  L  K  W  L  Q  V  Q  *  L  L  L  P  W  I  *  P  G  Q  L  P  P  E  P  G  F  A  T  V  I  Y  S  A  L  G  Y  T  L  Q  T  P  R  S  *  E  N  F  E  H  H  L  C  S  V  T  A  R  M  C  L  I  *  E  N  L  S  H  L  T  *  N  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0309F18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="101093" PGL_stop="101538"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101093" e_stop="101538"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="101093" e_stop="101538" e_length="446"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101093" stop="101381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101094" stop="101538"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGTAAGAAGATATATGTTTTTCTCACTTTATACAAAGAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAGAAAATTGTATTTCACTGCAATTGTATAATTCGCAATTTTATAATTCATTGGCTTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTGTATAATTAAGTGTATAACACGAAGATATACATTTTTTCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAAAATTATACACTTCTGTGTATAAAGCGAGAGAGGCAAGCGAGAATGGAGAGTGGCGAGCGAGATTTTTGGGAGAGAGACGCTGGCAAATTTTAGCTAATGTTTGCTATGGAGCACAATTAAATCAAACCCTAGCTATTCCATTTAATTTAAGTTATTAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  V  R  R  Y  M  F  F  S  L  Y  T  K  R  N  T  I  Y  T  L  L  L  Y  K  A  R  E  N  C  I  S  L  Q  L  Y  N  S  Q  F  Y  N  S  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  V  *  L  S  V  *  H  E  D  I  H  F  F  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  N  Y  T  L  L  C  I  K  R  E  R  Q  A  R  M  E  S  G  E  R  D  F  W  E  R  D  A  G  K  F  *  L  M  F  A  M  E  H  N  *  I  K  P  *  L  F  H  L  I  *  V  I   </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  *  E  D  I  C  F  S  H  F  I  Q  R  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  I  V  F  H  C  N  C  I  I  R  N  F  I  I  H  W  L  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  S  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  K  I  I  H  F  C  V  *  S  E  R  G  K  R  E  W  R  V  A  S  E  I  F  G  R  E  T  L  A  N  F  S  *  C  L  L  W  S  T  I  K  S  N  P  S  Y  S  I  *  F  K  L  L  </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  T  L  Y  K  E  K  H  N  I  Y  T  S  V  V  *  S  *  R  K  L  Y  F  T  A  I  V  *  F  A  I  L  *  F  I  G  F  F  L  C  N  I  *  S  K  M  F  V  N  C  I  I  K  C  I  T  R  R  Y  T  F  F  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  T  K  L  Y  T  S  V  Y  K  A  R  E  A  S  E  N  G  E  W  R  A  R  F  L  G  E  R  R  W  Q  I  L  A  N  V  C  Y  G  A  Q  L  N  Q  T  L  A  I  P  F  N  L  S  Y  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101278" stop="101538"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKMFVNCIIKCITRRYTFFHVYIQFSLALYKTETKLYTSVYKAREASENGEWRARFLGERRWQILANVCYGAQLNQTLAIPFNLSY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101096" stop="101293"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NVCILHNYKCIVRRYMFFSLYTKRNTIYTLLLYKARENCISLQLYNSQFYNSLAFFSAIFEVKCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="106420" PGL_stop="107138"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106420" e_stop="107138"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="106420" e_stop="107138" e_length="719"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106420" stop="107091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405162" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106421" stop="107138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434216" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTGCCTGACAAGCCAAGCATGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTAAAACTTGGTTTGGCACGAAAAGCCAACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACACAGATTTTTGCGAAAAGGAAAGATGGACTAGTTGCTGCTAAAGCCAATATTCAAGGTGCAAGGAAACTTGGAAACCCGGTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCTGAACCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTTCCTTTGGCAATCAGCGCTTTCACAACATTCTCACGATGCAACTCGGCCTTAGAACTCTTGAAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGATTGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTGCAATCTAACCAAAGAGTGGACGAGTACGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTGCTACTAAGAGGAGGTCATTTTGATAGCGGAGAGGATCTTTGCAGAACCTGCATTAGTATCCGAACTGTAATGCTGGGACATAACCATGCTCAAACTTTGGCTGCTCAACAAACCTTAGCCAACTTAGTAAGGATGAGGAGCAAAATATGATCCCAAAAA</gDNA_template>
            <first_frame> S  A  *  Q  A  K  H  G  R  A  K  R  N  Q  H  C  Y  *  *  N  L  V  W  H  E  K  P  T  G  K  Q  D  A  G  S  N  S  I  P  S  H  R  F  L  R  K  G  K  M  D  *  L  L  L  K  P  I  F  K  V  Q  G  N  L  E  T  R  *  Q  I  L  T  I  F  G  H  V  L  S  L  C  L  V  S  S  L  N  H  Q  L  F  S  S  R  R  W  T  W  F  S  S  S  E  K  Q  L  F  L  W  Q  S  A  L  S  Q  H  S  H  D  A  T  R  P  *  N  S  *  R  S  A  Q  M  C  S  K  K  Q  R  S  H  L  F  L  K  Y  R  I  G  A  T  D  L  S  A  G  K  R  S  C  N  L  T  K  E  W  T  S  T  F  G  K  R  *  H  Y  *  K  L  P  Y  W  K  L  E  Q  S  C  Y  *  E  E  V  I  L  I  A  E  R  I  F  A  E  P  A  L  V  S  E  L  *  C  W  D  I  T  M  L  K  L  W  L  L  N  K  P  *  P  T  *  *  G  *  G  A  K  Y  D  P  K   </first_frame>
            <second_frame>  V  P  D  K  P  S  M  E  E  R  R  G  I  S  T  A  T  S  K  T  W  F  G  T  K  S  Q  Q  A  N  R  M  L  D  P  I  P  S  H  H  T  D  F  C  E  K  E  R  W  T  S  C  C  *  S  Q  Y  S  R  C  K  E  T  W  K  P  G  N  R  F  *  P  S  L  G  M  C  F  P  C  V  W  F  Q  V  *  T  T  S  C  S  A  Q  G  D  G  H  G  F  L  H  Q  K  N  S  S  S  F  G  N  Q  R  F  H  N  I  L  T  M  Q  L  G  L  R  T  L  E  G  L  H  K  C  A  R  R  S  R  E  V  I  C  F  S  N  T  G  L  V  P  R  I  S  L  L  E  K  E  A  A  I  *  P  K  S  G  R  V  R  L  A  R  G  D  I  I  E  S  Y  P  T  G  N  *  S  K  A  A  T  K  R  R  S  F  *  *  R  R  G  S  L  Q  N  L  H  *  Y  P  N  C  N  A  G  T  *  P  C  S  N  F  G  C  S  T  N  L  S  Q  L  S  K  D  E  E  Q  N  M  I  P  K  </second_frame>
            <third_frame>   C  L  T  S  Q  A  W  K  S  E  E  E  S  A  L  L  L  V  K  L  G  L  A  R  K  A  N  R  Q  T  G  C  W  I  Q  F  H  P  I  T  Q  I  F  A  K  R  K  D  G  L  V  A  A  K  A  N  I  Q  G  A  R  K  L  G  N  P  V  T  D  S  D  H  L  W  A  C  A  F  L  V  F  G  F  K  S  E  P  P  V  V  Q  L  K  A  M  D  M  V  F  F  I  R  K  T  A  L  P  L  A  I  S  A  F  T  T  F  S  R  C  N  S  A  L  E  L  L  K  V  C  T  N  V  L  E  E  A  E  K  S  F  V  S  Q  I  Q  D  W  C  H  G  S  L  C  W  K  K  K  L  Q  S  N  Q  R  V  D  E  Y  V  W  Q  E  V  T  L  L  K  A  T  L  L  E  T  R  A  K  L  L  L  R  G  G  H  F  D  S  G  E  D  L  C  R  T  C  I  S  I  R  T  V  M  L  G  H  N  H  A  Q  T  L  A  A  Q  Q  T  L  A  N  L  V  R  M  R  S  K  I  *  S  Q  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106422" stop="107129"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>705</number_coding_nucleotides>
                  <number_encoded_amino_acids>235</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CLTSQAWKSEEESALLLVKLGLARKANRQTGCWIQFHPITQIFAKRKDGLVAAKANIQGARKLGNPVTDSDHLWACAFLVFGFKSEPPVVQLKAMDMVFFIRKTALPLAISAFTTFSRCNSALELLKVCTNVLEEAEKSFVSQIQDWCHGSLCWKKKLQSNQRVDEYVWQEVTLLKATLLETRAKLLLRGGHFDSGEDLCRTCISIRTVMLGHNHAQTLAAQQTLANLVRMRSKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="107299" PGL_stop="106555"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107299" e_stop="106555"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="107299" e_stop="106555" e_length="745"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107299" stop="106555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434217" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCTTAACAAAATGAATAAATTGCTGAAATCGATATGCATTTCGTATAAGTTGAACTGATGTGGTAAAAAGTACTTGATAATGGATGATTTCTATGTTACATGAACTAAAGAGGGAATAGCTTGGTGACAGTAAACAAAACTGAGCCACCAAAAAGGTGGCTTTTTGGGATCATATTTTGCTCCTCATCCTTACTAAGTTGGCTAAGGTTTGTTGAGCAGCCAAAGTTTGAGCATGGTTATGTCCCAGCATTACAGTTCGGATACTAATGCAGGTTCTGCAAAGATCCTCTCCGCTATCAAAATGACCTCCTCTTAGTAGCAGCTTTGCTCTAGTTTCCAGTAGGGTAGCTTTCAATAATGTCACCTCTTGCCAAACGTACTCGTCCACTCTTTGGTTAGATTGCAGCTTCTTTTTCCAGCAGAGAGATCCGTGGCACCAATCCTGTATTTGAGAAACAAATGACTTCTCTGCTTCTTCGAGCACATTTGTGCAGACCTTCAAGAGTTCTAAGGCCGAGTTGCATCGTGAGAATGTTGTGAAAGCGCTGATTGCCAAAGGAAGAGCTGTTTTTCTGATGAAGAAAACCATGTCCATCGCCTTGAGCTGAACAACTGGTGGTTCAGACTTGAAACCAAACACAAGGAAAGCACATGCCCAAAGATGGTCAGAATCTGTTACCGGGTTTCCAAGTTTCCTTGCACCTTGAATATTGGCTTTAGCAGCAACTAGTCCATCTTTCCTTT</gDNA_template>
            <first_frame> C  L  T  K  *  I  N  C  *  N  R  Y  A  F  R  I  S  *  T  D  V  V  K  S  T  *  *  W  M  I  S  M  L  H  E  L  K  R  E  *  L  G  D  S  K  Q  N  *  A  T  K  K  V  A  F  W  D  H  I  L  L  L  I  L  T  K  L  A  K  V  C  *  A  A  K  V  *  A  W  L  C  P  S  I  T  V  R  I  L  M  Q  V  L  Q  R  S  S  P  L  S  K  *  P  P  L  S  S  S  F  A  L  V  S  S  R  V  A  F  N  N  V  T  S  C  Q  T  Y  S  S  T  L  W  L  D  C  S  F  F  F  Q  Q  R  D  P  W  H  Q  S  C  I  *  E  T  N  D  F  S  A  S  S  S  T  F  V  Q  T  F  K  S  S  K  A  E  L  H  R  E  N  V  V  K  A  L  I  A  K  G  R  A  V  F  L  M  K  K  T  M  S  I  A  L  S  *  T  T  G  G  S  D  L  K  P  N  T  R  K  A  H  A  Q  R  W  S  E  S  V  T  G  F  P  S  F  L  A  P  *  I  L  A  L  A  A  T  S  P  S  F  L  </first_frame>
            <second_frame>  A  *  Q  N  E  *  I  A  E  I  D  M  H  F  V  *  V  E  L  M  W  *  K  V  L  D  N  G  *  F  L  C  Y  M  N  *  R  G  N  S  L  V  T  V  N  K  T  E  P  P  K  R  W  L  F  G  I  I  F  C  S  S  S  L  L  S  W  L  R  F  V  E  Q  P  K  F  E  H  G  Y  V  P  A  L  Q  F  G  Y  *  C  R  F  C  K  D  P  L  R  Y  Q  N  D  L  L  L  V  A  A  L  L  *  F  P  V  G  *  L  S  I  M  S  P  L  A  K  R  T  R  P  L  F  G  *  I  A  A  S  F  S  S  R  E  I  R  G  T  N  P  V  F  E  K  Q  M  T  S  L  L  L  R  A  H  L  C  R  P  S  R  V  L  R  P  S  C  I  V  R  M  L  *  K  R  *  L  P  K  E  E  L  F  F  *  *  R  K  P  C  P  S  P  *  A  E  Q  L  V  V  Q  T  *  N  Q  T  Q  G  K  H  M  P  K  D  G  Q  N  L  L  P  G  F  Q  V  S  L  H  L  E  Y  W  L  *  Q  Q  L  V  H  L  S  F </second_frame>
            <third_frame>   L  N  K  M  N  K  L  L  K  S  I  C  I  S  Y  K  L  N  *  C  G  K  K  Y  L  I  M  D  D  F  Y  V  T  *  T  K  E  G  I  A  W  *  Q  *  T  K  L  S  H  Q  K  G  G  F  L  G  S  Y  F  A  P  H  P  Y  *  V  G  *  G  L  L  S  S  Q  S  L  S  M  V  M  S  Q  H  Y  S  S  D  T  N  A  G  S  A  K  I  L  S  A  I  K  M  T  S  S  *  *  Q  L  C  S  S  F  Q  *  G  S  F  Q  *  C  H  L  L  P  N  V  L  V  H  S  L  V  R  L  Q  L  L  F  P  A  E  R  S  V  A  P  I  L  Y  L  R  N  K  *  L  L  C  F  F  E  H  I  C  A  D  L  Q  E  F  *  G  R  V  A  S  *  E  C  C  E  S  A  D  C  Q  R  K  S  C  F  S  D  E  E  N  H  V  H  R  L  E  L  N  N  W  W  F  R  L  E  T  K  H  K  E  S  T  C  P  K  M  V  R  I  C  Y  R  V  S  K  F  P  C  T  L  N  I  G  F  S  S  N  *  S  I  F  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106769" stop="106569"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ECCESADCQRKSCFSDEENHVHRLELNNWWFRLETKHKESTCPKMVRICYRVSKFPCTLNIGFSSN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="107613" PGL_stop="108337"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107613" e_stop="108337"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="107613" e_stop="108337" e_length="725"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107613" stop="108337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416115" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTTCCTTACATACAAAAACCAAAACACTCGGTAAATTCACTCTCACAATCAACAAACAACTACATACCCAATATAGTCCCACGAGTGAACATGTGAGGATACAATGTACGAGAGAACTTATCTGATAAATAAAAATCAACATCCAACCAAAAAATTTATCAAATCCTTTTAACATCTTCTTGCTTTAATTCAGTAATTCACACAACTCTCAATCAACAAAAACACAAAAAAAAAAAAAAAAAAAAAAAACTAAAGAAGAATCAAATAATGTTGGTGAGTCAGTGTAATGATCCTCTTTCAGCATTTGAAATCAATCCAGAAGAAACGGCGTCGTCTTCATCAACAAACAACCCTTCTGGATTCCTCAAACTTCCATGAATCACTGATAACAAAACTCCCATCATTATACCAATCATCAAACTGTTCAAAATTCCGGTATACCAAACAACAATGGCAGAAACAGTCGCCAGACCGGAAATCACAGCTAGATCGCTAACTTGATGCCCTAGAACAACCATAGGATCCTCCCGGAAGAAGAGAAAAATCAACCACGACGCAAAAATCAAACAGAAGAAAATCAATAAAATTGGTGTTCCGATGAGTGAACAAGCTGCGCAAGCAGAGATGAGAATAGCATAATTAACGGAGAAGTACTTCAAGTTCCTGCGGACGCGAATTGCAGCATCGGAGAAGGATGTCGGAATGTCAACGGCGCTTGCGCCG</gDNA_template>
            <first_frame> L  F  L  T  Y  K  N  Q  N  T  R  *  I  H  S  H  N  Q  Q  T  T  T  Y  P  I  *  S  H  E  *  T  C  E  D  T  M  Y  E  R  T  Y  L  I  N  K  N  Q  H  P  T  K  K  F  I  K  S  F  *  H  L  L  A  L  I  Q  *  F  T  Q  L  S  I  N  K  N  T  K  K  K  K  K  K  K  N  *  R  R  I  K  *  C  W  *  V  S  V  M  I  L  F  Q  H  L  K  S  I  Q  K  K  R  R  R  L  H  Q  Q  T  T  L  L  D  S  S  N  F  H  E  S  L  I  T  K  L  P  S  L  Y  Q  S  S  N  C  S  K  F  R  Y  T  K  Q  Q  W  Q  K  Q  S  P  D  R  K  S  Q  L  D  R  *  L  D  A  L  E  Q  P  *  D  P  P  G  R  R  E  K  S  T  T  T  Q  K  S  N  R  R  K  S  I  K  L  V  F  R  *  V  N  K  L  R  K  Q  R  *  E  *  H  N  *  R  R  S  T  S  S  S  C  G  R  E  L  Q  H  R  R  R  M  S  E  C  Q  R  R  L  R   </first_frame>
            <second_frame>  S  S  L  H  T  K  T  K  T  L  G  K  F  T  L  T  I  N  K  Q  L  H  T  Q  Y  S  P  T  S  E  H  V  R  I  Q  C  T  R  E  L  I  *  *  I  K  I  N  I  Q  P  K  N  L  S  N  P  F  N  I  F  L  L  *  F  S  N  S  H  N  S  Q  S  T  K  T  Q  K  K  K  K  K  K  K  T  K  E  E  S  N  N  V  G  E  S  V  *  *  S  S  F  S  I  *  N  Q  S  R  R  N  G  V  V  F  I  N  K  Q  P  F  W  I  P  Q  T  S  M  N  H  *  *  Q  N  S  H  H  Y  T  N  H  Q  T  V  Q  N  S  G  I  P  N  N  N  G  R  N  S  R  Q  T  G  N  H  S  *  I  A  N  L  M  P  *  N  N  H  R  I  L  P  E  E  E  K  N  Q  P  R  R  K  N  Q  T  E  E  N  Q  *  N  W  C  S  D  E  *  T  S  C  A  S  R  D  E  N  S  I  I  N  G  E  V  L  Q  V  P  A  D  A  N  C  S  I  G  E  G  C  R  N  V  N  G  A  C  A  </second_frame>
            <third_frame>   L  P  Y  I  Q  K  P  K  H  S  V  N  S  L  S  Q  S  T  N  N  Y  I  P  N  I  V  P  R  V  N  M  *  G  Y  N  V  R  E  N  L  S  D  K  *  K  S  T  S  N  Q  K  I  Y  Q  I  L  L  T  S  S  C  F  N  S  V  I  H  T  T  L  N  Q  Q  K  H  K  K  K  K  K  K  K  K  L  K  K  N  Q  I  M  L  V  S  Q  C  N  D  P  L  S  A  F  E  I  N  P  E  E  T  A  S  S  S  S  T  N  N  P  S  G  F  L  K  L  P  *  I  T  D  N  K  T  P  I  I  I  P  I  I  K  L  F  K  I  P  V  Y  Q  T  T  M  A  E  T  V  A  R  P  E  I  T  A  R  S  L  T  *  C  P  R  T  T  I  G  S  S  R  K  K  R  K  I  N  H  D  A  K  I  K  Q  K  K  I  N  K  I  G  V  P  M  S  E  Q  A  A  Q  A  E  M  R  I  A  *  L  T  E  K  Y  F  K  F  L  R  T  R  I  A  A  S  E  K  D  V  G  M  S  T  A  L  A  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107747" stop="107992"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSTSNQKIYQILLTSSCFNSVIHTTLNQQKHKKKKKKKKLKKNQIMLVSQCNDPLSAFEINPEETASSSSTNNPSGFLKLP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107892" stop="108110"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSVMILFQHLKSIQKKRRRLHQQTTLLDSSNFHESLITKLPSLYQSSNCSKFRYTKQQWQKQSPDRKSQLDR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="108479" PGL_stop="108090"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108479" e_stop="108090"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="108479" e_stop="108090" e_length="390"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108479" stop="108090"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438301" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAATATGCCATCACCGCCGACCTCCGTCACCACGGCCACCTACACCACCATCCCGATCGCCGGCGGTGATGTCATCAACCGGTCCGTTCAAAATATATACACTTTCCTTTCCCGAAGTCGACCATGGCCGGAATTTATCGCCGGCGCAAGCGCCGTTGACATTCCGACATCCTTCTCCGATGCTGCAATTCGCGTCCGCAGGAACTTGAAGTACTTCTCCGTTAATTATGCTATTCTCATCTCTGCTTGCGCAGCTTGTTCACTCATCGGAACACCAATTTTATTGATTTTCTTCTGTTTGATTTTTGCGTCGTGGTTGATTTTTCTCTTCTTCCGGGAGGATCCTATGGTTGTTCTAGGGCATCAAGTTAGCGATCTAGCTGTGATTT</gDNA_template>
            <first_frame> Q  I  C  H  H  R  R  P  P  S  P  R  P  P  T  P  P  S  R  S  P  A  V  M  S  S  T  G  P  F  K  I  Y  T  L  S  F  P  E  V  D  H  G  R  N  L  S  P  A  Q  A  P  L  T  F  R  H  P  S  P  M  L  Q  F  A  S  A  G  T  *  S  T  S  P  L  I  M  L  F  S  S  L  L  A  Q  L  V  H  S  S  E  H  Q  F  Y  *  F  S  S  V  *  F  L  R  R  G  *  F  F  S  S  S  G  R  I  L  W  L  F  *  G  I  K  L  A  I  *  L  *  F </first_frame>
            <second_frame>  K  Y  A  I  T  A  D  L  R  H  H  G  H  L  H  H  H  P  D  R  R  R  *  C  H  Q  P  V  R  S  K  Y  I  H  F  P  F  P  K  S  T  M  A  G  I  Y  R  R  R  K  R  R  *  H  S  D  I  L  L  R  C  C  N  S  R  P  Q  E  L  E  V  L  L  R  *  L  C  Y  S  H  L  C  L  R  S  L  F  T  H  R  N  T  N  F  I  D  F  L  L  F  D  F  C  V  V  V  D  F  S  L  L  P  G  G  S  Y  G  C  S  R  A  S  S  *  R  S  S  C  D   </second_frame>
            <third_frame>   N  M  P  S  P  P  T  S  V  T  T  A  T  Y  T  T  I  P  I  A  G  G  D  V  I  N  R  S  V  Q  N  I  Y  T  F  L  S  R  S  R  P  W  P  E  F  I  A  G  A  S  A  V  D  I  P  T  S  F  S  D  A  A  I  R  V  R  R  N  L  K  Y  F  S  V  N  Y  A  I  L  I  S  A  C  A  A  C  S  L  I  G  T  P  I  L  L  I  F  F  C  L  I  F  A  S  W  L  I  F  L  F  F  R  E  D  P  M  V  V  L  G  H  Q  V  S  D  L  A  V  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108477" stop="108091"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NMPSPPTSVTTATYTTIPIAGGDVINRSVQNIYTFLSRSRPWPEFIAGASAVDIPTSFSDAAIRVRRNLKYFSVNYAILISACAACSLIGTPILLIFFCLIFASWLIFLFFREDPMVVLGHQVSDLAVI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="-" PGL_start="114439" PGL_stop="113728"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114439" e_stop="113728"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="114439" e_stop="113728" e_length="712"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114439" stop="113728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345276" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114324" stop="113730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349270" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAAGTACAGCCATCCCCTACATCTCCAGCCTCGTTTTTGTGTAAGAGCAGTGGCAGTGGATTGATGGGTGCCCCCTTTGGCAGACAAGACTATTTAGGTAGGGGCAACTTACATACTGTGCGAAATGGACCAAACGAGACATGTGATATGAAGAAGTTTGTAGCAACTCCCATCTCTCATTGGCAGAATGCAACTTCAGTTGGGCCAAATGCTGTCAGAGAAATTATTGTAATTGATGATTCTCCAGAAAACGAGGCTAATTCTCCATACACCATGAACTCAGGGAAAATGCAGATTAGCTCAGGCTATACCTCAAGGTTTGTGGATCTCTGTGAAAATAGACCGCGTGGTGAAACTGGAGCAGCTCAGAATGCAAATTTGCTTACTCAAGTGAATGAGCTTCCTGCTAAGACATGGAATGTCAACCCAGACGGTTGTAGTTTAGTTCATCCGAGCTCTTTCTCAGCTTCCTCATCACCTGCAGGTCCTTTTAGATCATCTTTATATTATTCTCCAGGTTTTTCATAACCAAGAAATCGTCTTTTACATCTTGACTGACAAAAGAAAACGCGGCAAAGTTGAGCAGATGAGTTTTTCTAGTTTGGGTTTTCGCTTTCATAGCGTTTGATGTTTACTCAAAACAGTACTGAAAGTTCCATAGATATATATAATATATATAAAGCAGTTTAATTACTGAAGCCAGTTGAAAGT</gDNA_template>
            <first_frame> T  S  T  A  I  P  Y  I  S  S  L  V  F  V  *  E  Q  W  Q  W  I  D  G  C  P  L  W  Q  T  R  L  F  R  *  G  Q  L  T  Y  C  A  K  W  T  K  R  D  M  *  Y  E  E  V  C  S  N  S  H  L  S  L  A  E  C  N  F  S  W  A  K  C  C  Q  R  N  Y  C  N  *  *  F  S  R  K  R  G  *  F  S  I  H  H  E  L  R  E  N  A  D  *  L  R  L  Y  L  K  V  C  G  S  L  *  K  *  T  A  W  *  N  W  S  S  S  E  C  K  F  A  Y  S  S  E  *  A  S  C  *  D  M  E  C  Q  P  R  R  L  *  F  S  S  S  E  L  F  L  S  F  L  I  T  C  R  S  F  *  I  I  F  I  L  F  S  R  F  F  I  T  K  K  S  S  F  T  S  *  L  T  K  E  N  A  A  K  L  S  R  *  V  F  L  V  W  V  F  A  F  I  A  F  D  V  Y  S  K  Q  Y  *  K  F  H  R  Y  I  *  Y  I  *  S  S  L  I  T  E  A  S  *  K  </first_frame>
            <second_frame>  Q  V  Q  P  S  P  T  S  P  A  S  F  L  C  K  S  S  G  S  G  L  M  G  A  P  F  G  R  Q  D  Y  L  G  R  G  N  L  H  T  V  R  N  G  P  N  E  T  C  D  M  K  K  F  V  A  T  P  I  S  H  W  Q  N  A  T  S  V  G  P  N  A  V  R  E  I  I  V  I  D  D  S  P  E  N  E  A  N  S  P  Y  T  M  N  S  G  K  M  Q  I  S  S  G  Y  T  S  R  F  V  D  L  C  E  N  R  P  R  G  E  T  G  A  A  Q  N  A  N  L  L  T  Q  V  N  E  L  P  A  K  T  W  N  V  N  P  D  G  C  S  L  V  H  P  S  S  F  S  A  S  S  S  P  A  G  P  F  R  S  S  L  Y  Y  S  P  G  F  S  *  P  R  N  R  L  L  H  L  D  *  Q  K  K  T  R  Q  S  *  A  D  E  F  F  *  F  G  F  S  L  S  *  R  L  M  F  T  Q  N  S  T  E  S  S  I  D  I  Y  N  I  Y  K  A  V  *  L  L  K  P  V  E  S </second_frame>
            <third_frame>   K  Y  S  H  P  L  H  L  Q  P  R  F  C  V  R  A  V  A  V  D  *  W  V  P  P  L  A  D  K  T  I  *  V  G  A  T  Y  I  L  C  E  M  D  Q  T  R  H  V  I  *  R  S  L  *  Q  L  P  S  L  I  G  R  M  Q  L  Q  L  G  Q  M  L  S  E  K  L  L  *  L  M  I  L  Q  K  T  R  L  I  L  H  T  P  *  T  Q  G  K  C  R  L  A  Q  A  I  P  Q  G  L  W  I  S  V  K  I  D  R  V  V  K  L  E  Q  L  R  M  Q  I  C  L  L  K  *  M  S  F  L  L  R  H  G  M  S  T  Q  T  V  V  V  *  F  I  R  A  L  S  Q  L  P  H  H  L  Q  V  L  L  D  H  L  Y  I  I  L  Q  V  F  H  N  Q  E  I  V  F  Y  I  L  T  D  K  R  K  R  G  K  V  E  Q  M  S  F  S  S  L  G  F  R  F  H  S  V  *  C  L  L  K  T  V  L  K  V  P  *  I  Y  I  I  Y  I  K  Q  F  N  Y  *  S  Q  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114438" stop="113911"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVQPSPTSPASFLCKSSGSGLMGAPFGRQDYLGRGNLHTVRNGPNETCDMKKFVATPISHWQNATSVGPNAVREIIVIDDSPENEANSPYTMNSGKMQISSGYTSRFVDLCENRPRGETGAAQNANLLTQVNELPAKTWNVNPDGCSLVHPSSFSASSSPAGPFRSSLYYSPGFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="-" PGL_start="117282" PGL_stop="116192"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117282" e_stop="117198"/>
            <exon e_start="116808" e_stop="116192"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="0.918"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="117282" e_stop="117198" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="117197" i_stop="116809" i_length="389"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116808" e_stop="116192" e_length="617"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117282" stop="117198"/>
              <exon start="116808" stop="116192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117215" stop="117198"/>
              <exon start="116808" stop="116192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314835" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAGAAAGAAACATCACAACCTTCTGAAATCTGCTTCTCATACTAAAAAGTTTTGCTTGTCCAAGCCAGATCACTGTCCCAAG : ATTAAGAGTGGTCAAGAGAGCACCTTTTGTCCAAGAGAAAATGTTGACAAAATGGATTGCCTAAATAAGGACCTCAGATCTGCGGACCAGATGCTATCAAATGGATTGGCAACCATAAAACAATGGGCATGTTCAAAGAGAACTGGCCTCACAAGGAAGATCAGTGATAAGGACAATCATCAGCTTTCTGGCGCTGATATGTCGACTGGCGTGCAAAGTGACAATGATGTGTTGCCTCAGACTTATCCATTTAAAAAGAGAAGCGGTCTTGTGAAATCTCCAAGATCATCTGTTTGTTTGCCTGAGAGTAGCCAAAGAATGGGGAATATGCTACTTGATCAGCCTCAAGAAGAACGTAGCGAGGAACCACCTTCTCTACACAAGAAAGTGGTGGACTTTTCATCATCTCAATCTTCACTCCCATCTAACAAGAAGAGATCCCTAGTGTTACAAAGGTGCAAAGGAAAACATTTGAAGGTAGATGGCCATTCTGTGAACAATCATCCGAAAATGACTACAGGCCATGCACTTTCTGTGAAAAATGTGAGAGTTGGAAGAAACACAGATAACTACTCTGAGGTCAACTGTGAACAGTCCACCGCTCATCCATCATTCTC</gDNA_template>
            <first_frame> E  K  K  E  T  S  Q  P  S  E  I  C  F  S  Y  *  K  V  L  L  V  Q  A  R  S  L  S  Q   : D  *  E  W  S  R  E  H  L  L  S  K  R  K  C  *  Q  N  G  L  P  K  *  G  P  Q  I  C  G  P  D  A  I  K  W  I  G  N  H  K  T  M  G  M  F  K  E  N  W  P  H  K  E  D  Q  *  *  G  Q  S  S  A  F  W  R  *  Y  V  D  W  R  A  K  *  Q  *  C  V  A  S  D  L  S  I  *  K  E  K  R  S  C  E  I  S  K  I  I  C  L  F  A  *  E  *  P  K  N  G  E  Y  A  T  *  S  A  S  R  R  T  *  R  G  T  T  F  S  T  Q  E  S  G  G  L  F  I  I  S  I  F  T  P  I  *  Q  E  E  I  P  S  V  T  K  V  Q  R  K  T  F  E  G  R  W  P  F  C  E  Q  S  S  E  N  D  Y  R  P  C  T  F  C  E  K  C  E  S  W  K  K  H  R  *  L  L  *  G  Q  L  *  T  V  H  R  S  S  I  I  L </first_frame>
            <second_frame>  K  R  K  K  H  H  N  L  L  K  S  A  S  H  T  K  K  F  C  L  S  K  P  D  H  C  P  K  :  I  K  S  G  Q  E  S  T  F  C  P  R  E  N  V  D  K  M  D  C  L  N  K  D  L  R  S  A  D  Q  M  L  S  N  G  L  A  T  I  K  Q  W  A  C  S  K  R  T  G  L  T  R  K  I  S  D  K  D  N  H  Q  L  S  G  A  D  M  S  T  G  V  Q  S  D  N  D  V  L  P  Q  T  Y  P  F  K  K  R  S  G  L  V  K  S  P  R  S  S  V  C  L  P  E  S  S  Q  R  M  G  N  M  L  L  D  Q  P  Q  E  E  R  S  E  E  P  P  S  L  H  K  K  V  V  D  F  S  S  S  Q  S  S  L  P  S  N  K  K  R  S  L  V  L  Q  R  C  K  G  K  H  L  K  V  D  G  H  S  V  N  N  H  P  K  M  T  T  G  H  A  L  S  V  K  N  V  R  V  G  R  N  T  D  N  Y  S  E  V  N  C  E  Q  S  T  A  H  P  S  F   </second_frame>
            <third_frame>   K  E  R  N  I  T  T  F  *  N  L  L  L  I  L  K  S  F  A  C  P  S  Q  I  T  V  P  R :   L  R  V  V  K  R  A  P  F  V  Q  E  K  M  L  T  K  W  I  A  *  I  R  T  S  D  L  R  T  R  C  Y  Q  M  D  W  Q  P  *  N  N  G  H  V  Q  R  E  L  A  S  Q  G  R  S  V  I  R  T  I  I  S  F  L  A  L  I  C  R  L  A  C  K  V  T  M  M  C  C  L  R  L  I  H  L  K  R  E  A  V  L  *  N  L  Q  D  H  L  F  V  C  L  R  V  A  K  E  W  G  I  C  Y  L  I  S  L  K  K  N  V  A  R  N  H  L  L  Y  T  R  K  W  W  T  F  H  H  L  N  L  H  S  H  L  T  R  R  D  P  *  C  Y  K  G  A  K  E  N  I  *  R  *  M  A  I  L  *  T  I  I  R  K  *  L  Q  A  M  H  F  L  *  K  M  *  E  L  E  E  T  Q  I  T  T  L  R  S  T  V  N  S  P  P  L  I  H  H  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="-"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117281" stop="117198"/>
                    <exon start="116808" stop="116194"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRKKHHNLLKSASHTKKFCLSKPDHCPKIKSGQESTFCPRENVDKMDCLNKDLRSADQMLSNGLATIKQWACSKRTGLTRKISDKDNHQLSGADMSTGVQSDNDVLPQTYPFKKRSGLVKSPRSSVCLPESSQRMGNMLLDQPQEERSEEPPSLHKKVVDFSSSQSSLPSNKKRSLVLQRCKGKHLKVDGHSVNNHPKMTTGHALSVKNVRVGRNTDNYSEVNCEQSTAHPSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="128510" PGL_stop="128911"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128510" e_stop="128911"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="128510" e_stop="128911" e_length="402"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128510" stop="128911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467353" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGTTAAATTTACACTCAATTTCGTAATGCATGCTGGTGGAATCGCCGGTTATCCTCCGACGAAAAGCCGGTGAAAAATTCCTCAGAAATGTCGGGAGGGGAGTACGGGGATCACAACATTTTGTTACGTTCTACTTCATCGGCGTCGGAAGGCGATGTGGAAAGCCAGTCATCGCCGAGGAGAACGAATACCAGAAGCATTAAGGATCTATTGAAGAGGTTAGATCGAGGATTTTCTGGTCGGCGATCATCGGATAGGGATCATCACCACTCCTCGTCGCCTTCGCCTTCTAATCGCCGCGGTGTTTCATCTACTGCGGATGAAATTCTAGGGGATAGTGCTCCGCCGGAATGGGCGATGTTGCTTGTTGGATGTCTCCTTGGCCTTGCTACTGGCCTTT</gDNA_template>
            <first_frame> V  V  K  F  T  L  N  F  V  M  H  A  G  G  I  A  G  Y  P  P  T  K  S  R  *  K  I  P  Q  K  C  R  E  G  S  T  G  I  T  T  F  C  Y  V  L  L  H  R  R  R  K  A  M  W  K  A  S  H  R  R  G  E  R  I  P  E  A  L  R  I  Y  *  R  G  *  I  E  D  F  L  V  G  D  H  R  I  G  I  I  T  T  P  R  R  L  R  L  L  I  A  A  V  F  H  L  L  R  M  K  F  *  G  I  V  L  R  R  N  G  R  C  C  L  L  D  V  S  L  A  L  L  L  A  F </first_frame>
            <second_frame>  L  L  N  L  H  S  I  S  *  C  M  L  V  E  S  P  V  I  L  R  R  K  A  G  E  K  F  L  R  N  V  G  R  G  V  R  G  S  Q  H  F  V  T  F  Y  F  I  G  V  G  R  R  C  G  K  P  V  I  A  E  E  N  E  Y  Q  K  H  *  G  S  I  E  E  V  R  S  R  I  F  W  S  A  I  I  G  *  G  S  S  P  L  L  V  A  F  A  F  *  S  P  R  C  F  I  Y  C  G  *  N  S  R  G  *  C  S  A  G  M  G  D  V  A  C  W  M  S  P  W  P  C  Y  W  P   </second_frame>
            <third_frame>   C  *  I  Y  T  Q  F  R  N  A  C  W  W  N  R  R  L  S  S  D  E  K  P  V  K  N  S  S  E  M  S  G  G  E  Y  G  D  H  N  I  L  L  R  S  T  S  S  A  S  E  G  D  V  E  S  Q  S  S  P  R  R  T  N  T  R  S  I  K  D  L  L  K  R  L  D  R  G  F  S  G  R  R  S  S  D  R  D  H  H  H  S  S  S  P  S  P  S  N  R  R  G  V  S  S  T  A  D  E  I  L  G  D  S  A  P  P  E  W  A  M  L  L  V  G  C  L  L  G  L  A  T  G  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0309F18.1" strand="+"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128518" stop="128910"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYTQFRNACWWNRRLSSDEKPVKNSSEMSGGEYGDHNILLRSTSSASEGDVESQSSPRRTNTRSIKDLLKRLDRGFSGRRSSDRDHHHSSSPSPSNRRGVSSTADEILGDSAPPEWAMLLVGCLLGLATGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 359 chains have been computed
$ 
$ memory statistics:
$ 1461376 bytes spliced alignments in total
$ 230 spliced alignments have been stored
$ 6353 bytes was the average size of a spliced alignment
$ 49856 bytes predicted gene locations in total
$ 28 predicted gene locations have been stored
$ 1780 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 459 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-14 23:46:00
-->
