<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 15:24:51"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553249" ref_strand="+" ref_description="SGN-E553249 [cTSB-3-I17]">
      <seq>acctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcatgagtacagctgttaaccctagaaggaaagctcttgccctgtatcctgtagtactcatgtatgtatctgttggatttctcattattgcaattgattgattttagttgtgcctactgcctactatatgagtgaaagatgtatgaagccgatacacaacattgaagtagggatataacttgttagagatttttgattacctcatgaaattttgttgataattctagttctactctgatatctcacaatttgtactgctgtatgaagatgttatatgcatctagttctgtctgatgtatgttatgcctcaataaggagacctattctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10264" stop="4899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9964" g_stop="9682" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="358" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5199" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="847" r_length="489" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E553249" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9964" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCCATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACATGTTGGAGATTTTTTATTACCTCATGAAAATTTGTTGATAATTCTAGTTCCACTCTGATATCTCACATTTTGTACTGCTGTAAGAAGATGTTATATACATCTAGTTCTGTCTGATGTATGTTATGCCTCAATAAGGAGACGTATTCTCT</genome_strand>
        <mrna_strand>ACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCAATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACTTGTTAGAGATTTTTGATTACCTCATGAAATTTTGTTGATAATTCTAGTTCTACTCTGATATCTCACAATTTGTACTGCTGTATGAAGATGTTATATGCATCTAGTTCTGTCTGATGTATGTTATGCCTCAATAAGGAGACCTATTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E552139" ref_strand="+" ref_description="SGN-E552139 [cTSB-2-P19]">
      <seq>acctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcatgagtacagctgttaaccctagaaggaaagctcttgccctgtatcctgtagtactcatgtatgtatctgttggatttctcattattgcaattgattgattttagttgtgcctactgcctactatatgagtgaaagatgtatgaagccgatacacaacattgaagtagggatataacttgttagagatttttgattacctcatgaaattttgttgataattctagttctactctgatatctcacaatttgtactgctgtatgaagatgttatatgcatctagttctgtctgatgtatgttatgcctcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10264" stop="4916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9964" g_stop="9682" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="358" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5216" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="830" r_length="472" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E552139" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>830</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E552139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9964" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCCATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACATGTTGGAGATTTTTTATTACCTCATGAAAATTTGTTGATAATTCTAGTTCCACTCTGATATCTCACATTTTGTACTGCTGTAAGAAGATGTTATATACATCTAGTTCTGTCTGATGTATGTTATGCCTCAAT</genome_strand>
        <mrna_strand>ACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCAATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACTTGTTAGAGATTTTTGATTACCTCATGAAATTTTGTTGATAATTCTAGTTCTACTCTGATATCTCACAATTTGTACTGCTGTATGAAGATGTTATATGCATCTAGTTCTGTCTGATGTATGTTATGCCTCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371282" ref_strand="+" ref_description="SGN-E371282 [TUS-27-I9](-)">
      <seq>tcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcatgagtacagctgttaaccctagaaggaaagctcttgccctgtatcctgtagtactcatgtatgtatctgttggatttctcattattgcaattgattgattttagttgtgcctactgcctactatatgagtgaaagatgtatgaagccgatacacaacattgaagtagggatataacttgttagagatttttgattacctcatgaaattttgttgataattctagttctactctgatatctcacaatttgtactgctgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10188" stop="4960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9888" g_stop="9682" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="282" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5256" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="714" r_length="432" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E371282" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9888" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCCATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACATGTTGGAGATTTTTTATTACCTCATGAAAATTTGTTGATAATTCTAGTTCCACTCTGATATCTCACATTTTGTACTGCTGTAAGAAGATGTT</genome_strand>
        <mrna_strand>TCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCAATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACTTGTTAGAGATTTTTGATTACCTCATGAAATTTTGTTGATAATTCTAGTTCTACTCTGATATCTCACAATTTGTACTGCTGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371283" ref_strand="+" ref_description="SGN-E371283 [TUS-27-I9]">
      <seq>aacaattacaaaccgacacctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcatgagtacagctgttaaccctagaaggaaagctcttgccctgtatcctgtagtactcatgtatgtatctgttggatttctcattattgcaattgattgattttagttgtgcctactgcctactatatgagtgaaagatgtatgaagccgatacacaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10281" stop="5067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9981" g_stop="9682" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="375" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5367" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="696" r_length="321" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E371283" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9981" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCCATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACA</genome_strand>
        <mrna_strand>AACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCAATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291603" ref_strand="+" ref_description="SGN-E291603 [cLET-6-N21]">
      <seq>ctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcatgagtaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10262" stop="5217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9962" g_stop="9682" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="356" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5517" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="527" r_length="171" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E291603" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9962" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACA</genome_strand>
        <mrna_strand>CTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270273" ref_strand="+" ref_description="SGN-E270273 [cLEM-1-O3]">
      <seq>cgacacctgttcctgccattccatctccaccacccctaccttgatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaagacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10268" stop="5224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9968" g_stop="9682" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="362" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5524" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="526" r_length="164" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E270273" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E270273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9968" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCAT</genome_strand>
        <mrna_strand>CGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTGATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAAGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E718980" ref_strand="+" ref_description="SGN-E718980 [FC06BF05]">
      <seq>gggcgattggcggccaatcggccgaattgaagcatagtgcatacccattcttcttttacaatacgcatttcctctagcaccagttaccccacccactcacccaccccccactcaaccccgccttgtcctccatctccgatcatctctgcaaatctgagagctaccggaaaaaatgtcacatggagacactatacctcttcactcctcatctcaatctgacattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccattcctgtttcatcttctcctttcatgccttccaatctacgcccaccacctccccctacatctaccacaaccaacaattacaaaccgacacctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatgttggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10631" stop="5259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10323" g_stop="9682" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="673" r_length="641" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="674" r_stop="748" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5559" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="877" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E718980" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E718980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10323" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5559"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGTGCATAACACACTCTTCTTTTACAATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCA</genome_strand>
        <mrna_strand>CATAGTGCAT-ACCCATTCTTCTTTTACAATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E601335" ref_strand="+" ref_description="SGN-E601335 [54371]">
      <seq>tttacacctcaacagggcaacaccagttacaccgcccacccaaccccgccttgtcccccatctccgatcatctctgcaaatctgagagctaccggaaaaaatgtcacacggagacactatacctcttcactcctcatcccaatccgatattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccatacctgtttcatcttctcccttcatgccttccaatcttcgcccaccacctcctcctacatctaccacaaccaccaattacaaaccgacacctgtcccttccattccatctccaccacccctaccttcatcgggacagtcgaatatagcttcgtaccggattcggatcgccgcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagcgcttcgtgattgggatctatggggacctttctttttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgttttgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccacttgatgttggtgcctttatttgcatgctaaaggacaacgtgatattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10553" stop="5283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10254" g_stop="9682" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="602" r_length="574" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="677" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5583" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="782" r_length="105" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E601335" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E601335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10254" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGC-TACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTG</genome_strand>
        <mrna_strand>ACACCGCCCACCCAACCCCGCCTTGTCCCCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACACGGAGACACTATACCTCTTCACTCCTCATCCCAATCCGATATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATACCTGTTTCATCTTCTCCCTTCATGCCTTCCAATCTTCGCCCACCACCTCCTCCTACATCTACCACAACCACCAATTACAAACCGACACCTGTCCCTTCCATTCCATCTCCACCACCCCTACCTTCATCGGGACAGTCGAATATAGCTTCGTACCGGATTCGGATCGCCGCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCGCTTCGTGATTGGGATCTATGGGGACCTTTCTTTTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTTTTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCACTTGATGTTGGTGCCTTTATTTGCATGCTAAAGGACAACGTGATATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699542" ref_strand="+" ref_description="SGN-E699542 [FA10BG11]">
      <seq>cgcactcttcttttacatacgcatttcctctagcaccagttaccccacccactcacccaccccccactcaaccccgccttgtcctccatctccgatcatctctgcaaatctgagagctaccggaaaaaatgtcacatggagacactatacctcttcactcctcatctcaatctgacattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccattcctgtttcatcttctcctttcatgccttccaatctacgcccaccacctccccctacatctaccacaaccaacaattacaaaccgacacctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10611" stop="5358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10311" g_stop="9682" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="629" r_length="629" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6069" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="704" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5687" g_stop="5658" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="734" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E699542" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10311" e_stop="9682"/>
          <exon e_start="6143" e_stop="6069"/>
          <exon e_start="5687" e_stop="5658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACACTCTTCTTTTACAATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTGGTAATGACACTTTCTCACCCTATCTTTGGTAAAACGAGAATAACCAAAGATAAAAAACACCCTAATGATGGATATGTTTAATGATTTTTAAGCAGTAAGTAGACATATTATAAAAATTCAAAGAGATATGAGATTTGAATGGATAGGAAAAAGAACAGCTAATTAGTGCATATATAGTCAAGGAATACAGTCTATAGGCACTAGTCCCGAAAAGCAAAACCATTACAGCAGCTCTTATGATGAAAGGAACTCTATTAAGCCGTCTTGTGTATCTAGGATATAGCATGTTTCCTTTTTGCAGTTCTGAAGAATATGGAGTCACGGTATTTATGTAAACAATGCTGCTTCTACTTCAGATGGATTAATGATTTTGACATGCAGGGCGGTCATATAATCTTCTTCCAAAGTCTC</genome_strand>
        <mrna_strand>CGCACTCTTCTTTTAC-ATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E721292" ref_strand="+" ref_description="SGN-E721292 [FC13BE09]">
      <seq>caaccccgccttgtcctccatctccgatcatctctgcaaatctgaaagctaccggaaaaaatgtcacatggagacactatacctcttcactcctcatctcaatctgacattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccattcctgtttcatcttctcctttcatgccttccaatctacgcccaccacctccccctacatctaccacaaccaacaattacaaaccgacacctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccaaaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattggaatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10542" stop="5770"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10242" g_stop="9682" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6070" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="635" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E721292" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10242" e_stop="9682"/>
          <exon e_start="6143" e_stop="6070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACT</genome_strand>
        <mrna_strand>CAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAAAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAAAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGAATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706448" ref_strand="+" ref_description="SGN-E706448 [FA30AA01]">
      <seq>ctcactcttcttttacaatacgcatttcctctagcaccagttaccccacccactcacccaccccccactcaaccccgccttgtcctccatctccgatcatctctgcaaatctgagagctaccggaaaaaatgtcacatggagacactatacctcttcactcctcatctcaatctgacattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccattcctgtttcatcttctcctttcatgccttccaatctacgcccaccacctccccctacatctaccacaaccaacaattacaaaccgacacctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10611" stop="5771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10311" g_stop="9682" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6071" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="703" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E706448" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10311" e_stop="9682"/>
          <exon e_start="6143" e_stop="6071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACACTCTTCTTTTACAATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTAC</genome_strand>
        <mrna_strand>CTCACTCTTCTTTTACAATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E622797" ref_strand="+" ref_description="SGN-E622797 [73168]">
      <seq>atttctaacaatacgactgggcattccctgcattacacctcaacagggcaacccgccttgtcccccatctccgatcatctctgcaaatctgagagctaccggaaaaaatgtcacacggagacactatacctcttcactcctcatcccaatcagatattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttcttctcctcgtgctgccatacccgtttcatcttctcccttcatgccttccaatcttcgccctccacctcctcctacatctaccacaaccaccaattacaaaccgacacctgtcccttccattccatctccaccacccctaccttcagcgggacagtcgaatatagctgctaccggattcggatcaccgcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagcgcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtccgaagtttttgctgttgcatttgctctgctggctgccggtgctgtcatcctgacattgaatgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10542" stop="5777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10238" g_stop="9682" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="608" r_length="557" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6081" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="671" r_length="63" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E622797" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10238" e_stop="9682"/>
          <exon e_start="6143" e_stop="6081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAAT</genome_strand>
        <mrna_strand>CCCGCCTTGTCCCCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACACGGAGACACTATACCTCTTCACTCCTCATCCCAATCAGATATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTTCTCCTCGTGCTGCCATACCCGTTTCATCTTCTCCCTTCATGCCTTCCAATCTTCGCCCTCCACCTCCTCCTACATCTACCACAACCACCAATTACAAACCGACACCTGTCCCTTCCATTCCATCTCCACCACCCCTACCTTCAGCGGGACAGTCGAATATAGCTGCTACCGGATTCGGATCACCGCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCGCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGAAGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATCCTGACATTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E600428" ref_strand="+" ref_description="SGN-E600428 [53438]">
      <seq>tttacacctcaacagggcaacaccagttacaccgcccacccaaccccgccttgtcccccatctccgatcatctctgcaaatctgagagctacgcggaaaaaatgtcacacggagacactatacctcttcactcctcatcccaatccgatattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccatacctgtttcatcttctcccttcatgccttccaatcttcgcccaccacctcctcctacatctaccacaaccaccaattacaaaccgacacctgtcccttccattccatctccaccacccctaccttcatcgggacagtcgaatatagctgctaccggattcggatcgccgcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggtttgccctaatccttatagagaagatcctggcaaagcgcttcgtgattgggatctatggggacctttcttgtgcattgtttgccttggtctcactttgtcatggtctgcttctgttcagaagtctgaggtcctcgctgttgcatttgctctgctggctggcggtgctgtcattctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10553" stop="5789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10254" g_stop="9682" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="602" r_length="574" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538">
            <donor d_prob="0.995" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6143" g_stop="6089" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="657" r_length="55" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E600428" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E600428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10254" e_stop="9682"/>
          <exon e_start="6143" e_stop="6089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTAC-CGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAGGTAACTCCCATTTACTATTTCATTGTTCAAACTATTGGTGGAGTCTAATTTACTTTCGTCTTGTGTTAGAAGGTACTGAGTTCTGAAAATGTTTTAGAAGCATTTCTTTTTGTGATTGTGCATGTTTTGTAGTTTTGATGTATAATTCTAAGTAACACTGCCACAAGGGGCACTCAATTAGATCAAGTAATAGCTGAAAAGAAAGGATAATGCTTTGGAAATTACAAGTGCCGGGGGAACAAATGAACAATCAAGAATTTTATGTATTGGCAAACAGCTCGATCAAAATTTGCAGATGTCAAAAAGATAACTTGTCATACCACCAAACAAAAGGATTATGGTGTTTGTTTCAATATCAGATGCACAACTTATTCGAAGGAAAAATGAGAAATCTGTGATTACTTTTCTCCCCTATATAAATTGTTTATGAAATGGACTTTGGACCTAAACAACCCCAGATTAACTCATGAGGGAAGGATTGTCCCATACAAGAGGTAACAATCCCATTTTCATTATCAATAGGTCACTAGTAACACTCTCTCACCAGCCTAAGATTGGACATCTATGGCATGGAAAACATAACATGATGGCCCAGTATTGGGTAAACCAAGAAAGAGGATGAGTCTAGCTTTAATACCATATGATCTTCACCCAATCCAACCCAAAAGCTAGCTTATGAGGGATGATTGCCTATGATCATAAAAGGAGAGCACACCCTATTCCCTCAATTAATATAGGACTTAATAGTTTACACTCCCCTGTAAGATGAGGAATGGACAACCGGAACGTGTATGACATTACATAGGGCTCCAACATTGAGAAGCACACCAACATGGATCAATGAGTTTTGCTTTGATACCATGGTATGACATGAATCATAAGCTACATTTTTCTTCCCTTTCTTGTTATACAGTATTGGTATGTAATGAGCCTGAATGAATCGGAATTGACCTTAGAGGATTCATTCAGCCAGCCCAACTGATCTGGGATTTGAGGGATTGTTGTTTCTTTTACAAAAAAACCAACAAATATATTTGTAGTTTCTTGCCTGTCCTTCCTCGGTCCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACTTCTAAATTGTCTCTCCATTTTACCATGAATCTCAACCATTTTATTTCTTTTACGGCTCCTCACCTAGATCCAGCCCAAAAGACAACTCTTGGAATTGCCTAATTTTCAAATTTTTGCTATCTAGCTGTCTATTTTTATTACAGTTCACATTGTAATCATGTTGGCAGCCCTACTCCTTCCCCTTAAAATCTGATGCTTTCTTGTGGCTATGTCCCATAGACTTGCTAGGGTATAGTTGGCTTGGTGTAAAAATGACTATGAAAACAACACAGTTGAATGGAAATAGTTCTATTTAGTTTGTGCACGGAAGTCCAACATGCCTAGAGTTTATATCTCTGTGGCTATTGGCACAAACTATAAATAAATCATAAATAGAATAATGTTCGCAACGTAAATGAATGTTTACTTCAGTGGATCCAAACAAAAGTATAAACAAGAGACAAAGCTAAGCTCTTTATCATCTTAGTAAGTGCCTTATGATGTTTATAACAGATATAAAATAATCTATATACTCTAATTTACACCAATAACAAAAGTTAAGAATACAATTCATCTTACGTTTTTTTAAGGAACTACAAATATCTTCGAAACACCTAGATTCCTGTTTAGAAAAAAAATAGGTACTAATATGCTCTCAGGCTCGATTAATGAGGTAGTTCCCTAAGATCCTTCTCAGACTTCTGGATACCTTCTCCGGTGTTATTCGATCGCCGAGATCTATTCTTATTCTCCTTTTCCTTCTTTTAAGTCTTTTAATGGCCATGGATAATTTTATTTATTTCAGATTTGTGGGGAAGTCGTTTGACATTATTGAGTCTAAGGCATATGAGTGAGAGATGGTATGAATGTGGAGAAGCACAAACCAGTTATTAACCTGAAAGGAATTGTTGAAATACTTGCTTATCGACCATCAAAATTGTCAACAACAAATTAAAACGTTATAACATAACTTCTTATATCACTCGTCCTGCTAGAAGCCTGCCTTACCCTTATAAGAAATGTAGTAGTAAAGGCATACTTTGACATTGTCGGCTTTAGGATTAATGTGTCCCTACAGCTTTGCATCTCCTTGATTGACTACTTATAAAATTTCTGATTCTATGATCCAAAATAAAGAAGGGATAATACGAACATATAGTGTTGGTGTGCTTGGATCTATAGTTTGGATAAAGAAGTTGCACTCTTACCACTAGACCGAGGTCTCGAGGGCAAGCTGTGTAGACTATTTATTACATCCTTAGCCTAGAAGTGGTGCACTCTTGTTGTTTCCCTCTCATGTACCAACTCTCATTTGTTGTATTGCTGGTCTCGTTAAAGATGGCTCTACTTTCTACCTGACCTTTAGTACTTTGATTTCTTGCTGTTTCATCATCTAAGTCCAGCTCAAGTGAAACCCCTTGGAATTGCCTAGATTTTCAACTTCTACTATCTTTTTTGCCAAATAATTTTCAACTTCTACTATGTAGCTTTCTATTTGCCACTATAGATCACACTGTACTCATATTGATTGTCTCAGGCAGAAAGATGGGTGAATCTTTCTCTGCTGAGCAACTTAAACTAGACATCCTCTTCAATATAGATGTCTTTTTGTGGACATGTGCCATGAACTTGATAGGGTGTCTAGATTATAGTTGCTTGGCTAAGTAATAATAACACAAATCAGAAACAGTTATACGTTTACTTTGTGCACTGAACTCGACCTTGCCTTGAATCGTGACAAGCCACTTGTACCACTCTAAATCTCTAGTGCTACTTTGACAAGTCATCTCATGGTGCGCAATTAAATAACCTGGAGTAGAAATAGATGACTACCAATAGCAGATGCTCATAGAGCAGAAGTTACAAGAATTATTGTGGCCTTTGGATAGCTTTGATTAAATGATAAAAGCAGAGAAATAAGATATTTGGTGTAGAGAAGGTATAGAAGAAGCTGAACAGTTTGTACTTTGTACATTTTCTAGGTGTAGAGAAGAAGGTATAAAGAAAACTTCGAGTCCTAAACACAAAATTGTGCAGTTTTTGTTCCTCCCAATGTGGACAAATCTTCTTCATGTCTAAACAAACCTTCAGTTACTTTGCCTTTTTGTTGCTTCTATTACGAGTTGTCTCTTATATGACTTCCTATGGACCCAAGGACAAACCATGAAGAGGTTGTATACTTTAAGTTATTTGCAGACACATTAAATACGAAAAATAATCTTGATCATTTTGAAGACTATTGAAACCTGGTCAGGCTGAATCTTTCCCAATCATAACACATTGTCTTGTTCATGCACCAAGTCTATGCACCCATGCTCTATTTTTCGAGTTCTTTAATACTTAATGCAGTTGCCTATGGTTGTATAGATGATTCACAGACTCACATTAATGCAGGTGGACTCCTGACTAATGGGTTTATTTTTCTTTCTTATTTCTTTATATTTTCTTCCAGTCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGA</genome_strand>
        <mrna_strand>ACACCGCCCACCCAACCCCGCCTTGTCCCCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACGCGGAAAAAATGTCACACGGAGACACTATACCTCTTCACTCCTCATCCCAATCCGATATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATACCTGTTTCATCTTCTCCCTTCATGCCTTCCAATCTTCGCCCACCACCTCCTCCTACATCTACCACAACCACCAATTACAAACCGACACCTGTCCCTTCCATTCCATCTCCACCACCCCTACCTTCATCGGGACAGTCGAATATAGCTGCTACCGGATTCGGATCGCCGCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTGCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCGCTTCGTGATTGGGATCTATGGGGACCTTTCTTGTGCATTGTTTGCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTCAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTCCTCGCTGTTGCATTTGCTCTGCTGGCTGGCGGTGCTGTCATTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209465" ref_strand="+" ref_description="SGN-E209465 [cLEC-54-G13]">
      <seq>cccactcaaccccgccttgtcctccatctccgatcatctctgcaaatctgagagctaccggaaaaaatgtcacatggagacactatacctcttcactcctcatctcaatctgacattgatgaaattgaaaacctcatctattccaatccttctactgtccttccagcacgccctccttctcctcctcgtgctgccattcctgtttcatcttctcctttcatgccttccaatctacgcccaccacctccccctacatctaccacaaccaacaattacaaaccgacacctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaataccctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="10548" stop="9570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10248" g_stop="9870" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E209465" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10248" e_stop="9870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTA</genome_strand>
        <mrna_strand>CCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270273" ref_strand="+" ref_description="SGN-E270273 [cLEM-1-O3]">
      <seq>cgacacctgttcctgccattccatctccaccacccctaccttgatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaagacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="+" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="18313" stop="25950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18613" g_stop="18899" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.913"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18900" i_stop="25062" i_length="6163">
            <donor d_prob="0.957" d_score="0.88"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25063" g_stop="25137" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="362" r_length="75" r_score="0.920"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25138" i_stop="25486" i_length="349">
            <donor d_prob="0.857" d_score="0.90"/>
            <acceptor a_prob="0.477" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25487" g_stop="25650" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="526" r_length="164" r_score="0.872"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="+" ref_id="SGN-E270273" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18613" e_stop="18899"/>
          <exon e_start="25063" e_stop="25137"/>
          <exon e_start="25487" e_stop="25650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATACCTGTTCCCGCCATTTCATCTCCACAACCCCTACCTTCATCGGTACAGTCGAATATAGCTGCTACTGGATTTGGATCGCCTCCCAATACCCTTATAGAACCCGTTTGGGATACCGTCAAAAGAGATCTGCCTAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAGGCTCTTCGTGATTAAGATCTATGAGGACCTTTCTTCTACATTGTTTTCATTGGTGTCACTTTGTCATGGTCTACTTTTGTTAAAAAGGTACATTGTCAAATTTTATCAACAAGCTTACCACTTTACTGTTCAAACTATCGGTTGAGTCTAATCTACTTGTGTCTTATGCTAGAAGGTACTCAATTCTGTTAATGTTTTAGAAGTATTTCTTTTGTAGTTTTGATTTATATCGTGTGTAATTCCAATTTACTCTGGCACAAGGGGCACTCATATAAGATCCAAATTATAGCTAAATAGAAAGGATAATGCTTTGAATTACAAGTGCCGGAGGAACAAATGAAAGAACTAGAGTTTTATATGTTGGCAAACAGCTGATCAAAACTTACATAGGTCAAAAGGATAACTTTAATACCATTAAATGTTTCAATACCAGGTGCATAAATTCTTCCAAGGAAAAACTAGAAGTGTGTGATTACTTTTCTTTTCAGATATAATCTTCATTGTTTATGAGGGAAAGGATTGTCCCATATAGGAGATAACATCCTGTTTTCTTAATCAATAGGTGACTAATAATACTCCCTCGCCAGCCAAAGATTGGACATCTATGGCATGGAAAACATAACATGATGACCCAATATTGGGTAAACCAAGAACGAAAATGAGTCTAACTCTAATACAATGTGAAGAAATGGATCTTCAGCCTAATCCAACCTAAAAACTAGCTTATGAGGGATGATTCCCTATGACCATATAAGGAGAGCACAACCAATTCCCTCAATCAATATCAGACTTAATAGTTAACACTTCCCCATATGATGAGGACTGGACAATTGGAGCATGTATAACATAACACAGGGATCCAACAATGAGAAGTACACCAACATAGATCAGTGAGTTTTGCTTTGATACCATGATATGACATGGCTATGCTGCCCTTCCCTTGTTCAAGAGAAAGGGAGGACTTTCTTTTAGCTACCGACAACTATGAGCTATATTTTTCTTCCTTTTCTTGTTGTATATTATTGGAATGTAATGAGCTTAAATGAATCAGAAGTGACATAAGTGGATTCATTCAGCCAGCCAACTAGTCTGGGATTTGAGGGATAGTTGTTTTTTTACTAAAAAAAACAACAACTTTATTGTAGTTTCTTGCATGTCCTTTCTTGGTTCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACATTCTTAATTGTCTCTACATTTCACCATAAACCCCAACTATTTTTTTGGCTCCTCATCTAGATCCATCTCAAAAGAGAACTCTTGGAAGTGCCTAAGTTTTCAACTTTTTGCTATCTAGCTGTGTATTTTTATCACAGTTCACATCATAATCATGTGGCAGTCCTACTCCTTCCCCTTATAAGTTTCTGTCTTCTTATGGACATGTCCTATAGACTTGCTAGGGTATAGCTAGCTTGGTCTTAAATGACTATAAAGACAACACAATTGAATGGGAGAAAATAGTTCTATTTATTTTGTGCACGGAAGTCCAACATGCATAGAGTTATATTCTGTTTGTCTATTGCCTTTATTTTTTATGACAAGGTAACAAACTATAAATAAATCATAAACACAAAAATGTTTGTAACCAAAGTGAACGTTTACATCAGTGGATCCAAACCCAAAGTATAAACAAGAGAAAGAGCTAAGCTCTTTATCATCTTGTTAAGAACCTTATGATGTCTATAACAGGAACAAAAACATCTATATACTCTAATTCACATCAATAACAAAAGTTAAGATACAATTCTCTTACGTTTTTGTAAGGAACTACTAGTATCTTCAGAACACCTAGATTCCTGTTTAGAAAAAATAAATAATAGGTACTAATATGTTATTAGGCTCAGTTAATGAGGTAGTTACCTAAGGTCCTTTTCGGACTTCTTGTATCGATACCTTCTCTGGTGGTATTCGATCGTCGAGATTTATTCTTAGTCTCATTTTCCTGCTTTTAAGTCTTTTATTGGTCATGGATAATTTTATTTATTTCAGATTTGTGAGAAAGTTGTTTGACATTATTGAGTCTAAGGTATATGAGTGAGAGATGGTATGAATGGGTGGAGAGTTTCATAGTGTGTATTAGGAGAATGTCTTCAAGTCTTGATGCCCTGCATCGGGTGTCGCAAAGGCTCAGAGAAGCATTAGATATTAGAGGTAGAGTGTACAAGACAAAGGGAAGCAGAGATAAGGCTACGAGCCTCTTCTATGCCTGAAGTTCAATAAACCTGGTCGCTTTATTTTTGTCTTTGCTGTCAAAGGGGGTTCTAGGTCAGTTACTATTGTGGCAGAGAACATATTTAATGAGGGCTACACAGTTGACTTTGGGTTCAAAGTTTGCCTGCCTCGTTAAAGATAAAGTTAGACAGGGGGCCTTAAATACCAAAAGGACAAGGGATGTCAGATTATTAAGTGATGAAAGAAGCTTTAAAGAAGTATTAAATAAATCTACATGGATCCATGATGGTGATAATGGGGAGATATGACGGCTTCCATGGGGGGAACAAAGCTGTCTCATGTTAAGAATTCCCTCTTAGAAGATGCTTAGGTTCAGTTTCGCTGAGTGCAATGAAATCCCTTCACAAGATGATGTCAAAAAATGGTCACATTAAGCTTGGATTGGAATATATAACCTCCAAGTGTTTGACATGAACGAGAGTTCATTCCTATTTGATTTTCAAAGTGTGAAGGACGCAGAGCATGTCATGAAAGAATCTTGATAAAACCAGGGAAGCAGTCTCAAGCTGGATTGGTGGTCTTCATTCATCAATAGGTAGAGCATACTCAATTAGTACCAATTTCAAATAGTATTGGATTAGGGATCTAGGTCTGCCACTTTAACTATGGTCCATTAGGGGTTATAAAGCAGATTGGAGAAAACTATGGCGGGTGGTTGGAGAAGTAGCTCAAGAATCACTTGAGATGGGCTTGAGTTAAAGTAATGGTCGCTGAAAAATGTTCGGACGTTGGTTGAGCTCAGGGATGGGGAATGGAGATTCAATTTACAAGTATGGGTAGAAGCGCCGACAAAATTTGAAAAAAGTTTTGTTGTTGAACTCTCAAGAGGGGGCAAAACTTTTCACAGAAAAGGAGTTAACAGCTTGTGTTAGTTAACTGTGGAGAAAGGGAAAACACCAAGAAAGGCGAAAGGGCTAATAGCTAGGAAAGATCTGTTGGATATTGGATACGATTGAGGTTTTTACACAATGGACAAAGATGATGTGCACGTGACTGGATGCAACAATTCAAAAGGAGTAGGGTCAGTGGATCAATTTTACTCCAGATCGCCTTCTCTTCGTTTAAATGAAAGTGGGCCTTCCTCTCATTTTAATGAGAAAATACAGAAAGGCTTAATTAAAAAGCCTACAACTGAGCCTTTCATTGAAAGCATAAACGCTCATGTGGGCATTGTATAGGGGCTGCGAATTGCGACAGGTTTTAACTATGAAGATGAAGCAAGGGATGCTCATAAGAGAAAGGGCTGAGGATCACATGTAGAGAATCGACACAAACCATGAAGCATATGTGATCATAATTCCATTAGAGTTGATCTCGGAAACTGAGTTGATTGATGCAGATGAGATAACATGAAAAACAAGGGAAGGACACAAATGCAGCTGATTCCGATTGAAGAGCCTGCACCTATCCAATATGACCTAAGTGAGTGTAATAATAAGGTGGAATCTGATGCAATATCTTGGGTGCATCAAAATACAATTACATTAAGGAAGGAATTTGAATCCATTTTAATGGTTTGGAAAAAGATGCAGAGGCCCTCTTTGAGAGGCTAGATCAAAGAAGAGAAGTTTCACAGTCAAACAAATATAACAACCTTTTGATCCCAAAAGAGGTTAGAAATTTAATCTTTGAGGTCAATTATAACGATGAGGAATGTAGGAGTGAGCTAAGAAAGGGGAGACGACCACCAATTAGAGATCAATAAAGGTTAAAACTATGTCATGACACGTGAGGGGTTTGAATGGGGCAAACAAGAGGAGGCTGGTAAAACAAGTAATTCACAAGTGGGGGGCAAACATTTGTGTTCTTTTAGAAACAAAGATTGGAGGGTAAGTAATTTAATGAGGGAGTTGTGGGCTAATGGATCAGAGAAGTACATTTGGAGGCCAGGAATAGTAGAGGAGGGATTTTGATATGTGGGATAAAAGGGAGTGGGTAGGAGAACTAGTGTAGATTTCCGGCCAGATGATAACATGTAAAATCACAGTGTTTCCTTCATTCTTAAACTCATGCCCTGTCAAACTATACAACTTTGCCACATTAATTTCAATGGAGAGATTGTGTATACCTCAATTTGTTGTTTCAAAGGTTTGAGCATCACGTTTTACCTAATTTTGATTATTGGATGGTTGACAAGTGCATAGTTACTTTCCTTGGTAAAGAACTAGTTACCTTTGATATCCTTTATGCAACAACAAGGGAAAGATTGCAGAGAAACAACTATAGTAGCCCATTCAGTATCTCGAATATCTTGACTCTTGAGATATATATGTTGATTATGAGAGACTTCCAAACTATTAAGCTGGTAAGATTCCAATTTGTGCTTTGTTAGGATGACTAGTGGTTACTGAAAAAAGGTAATGTATTCAGCTGGAGGAAGCGGAAAGAGAGGGATTTAAGTGCATTTTATCTATGCATTTTAGTTTCTTTATTGCAACTATCAATCTTATTTAGTGTATACGGGTTATATAACGAGGATGAAAACAAGATCATTTATCCTTGATTTTCTTGCTTTGTGCTTGTGAGATCTTTTCTTGTTTTTCTTGCTTTGCTTAGCTTAAAATATTCTAGAAATTTTCTTTATCAAGAAAATTTCTAGCAATTTCTTGGCTGTCCTGTGAAGGCCCTTTCTGCGTTTTTGCTTTACCTCTTCATTTTAAGTTGTTGAGGTCGAGGTTTAAGTGACTTGTGCTCAAAGTTTATATTGATGTTGTCACATGCCCTTCTTCCACTTTAATGCAGCTTCACCATCTTATCTCATGTTGGGAGATTAATTAACTTGGAGTAGATAACCGATGATCACAAAGAGGAAGTTACAAGTACTGATCTGACTTTGTCTAGCTTACTTGAATAATAAAAAAAGAGAAAATCAGATGTATATTGTTAAGAATTTACTGGTCTTAAGAAGGAGAAGCAGAAGTGGTAGAAGAAGAGAAGATGCTATGGGAGGGAATGGAGTATAAGCAGAACTCTTAACAAGGGTGCAAATTATAAACGTGTAATTCTAGTGTCAATACTCAATAGTCCTCTACTCCTCTTCTATGTAAAACTATTCAAGCTTGTATATATGATGGAAGACGAGTGTCATGGCTACTTCATAGACTTCCCAAAAATGGTTGGTCAAAACTAGGACTTACAGTGAGACTTACTTGGTCAACCAGAAAGACATCAGTGCATATTTTGCTATACCCTGGGGAAAATATGAATGAAGAAGCATGTTAAACAACCTCAAACTTTTCTGTTTCATTAACTGGAAAGATTCTTCTAAACCTGTCGGCCAAAGAGAAACCTGCACTTTTAACTTGGTATTGGTATAAATGTGATATGTCAGTCCTAAACTCAAGATCACTCAGTTCTGTCTTTTGTTTGCACACCCCAATACCTTATTCAAAAAAAAATGATCACTTAGTTTTCATGCATCTCACTGTGGATAGTTCTTATTCATGTCTAAATGAACCTTTTGCAGTTGTTTTTGCATTTCTTTATTATTTTAAATTTTTTGCTTTTTTGTTGTTACTAGTTATCTCTTATTCAACATGTTGTGAGGAGTTACCTTCCAAGTTTGTGAACAATCAGCAATGTTTCTGTGGACCCATTAACAAACCATCAAGAGATTATCGAATGTCAAGTGGAAATGTTGTTTGTCTAGACAGTTATTTTCAGACAATTTGATGTAATGAATAATTCTAGATCAGCTTTTGGACTGTTGAAACTTAGGTCCGGCCGGATCTTGCTCGATTATGGCATGTTGTCTTGTTACTGTAACGAAGTCCACAGGCAGACATTATTTTACTCTTTTCTTTTATACTTCGTTTAGTTGCCTATGGTTTTATATACCGTAACCAAAATAGCTTGGACTGTTTATATAACCAAACTGAACTAGCTGCAGCTGAAGCTTATGTGATTGATTAATTGATATTTAATTTCTTGTGGTTTGAGTGATTTTGTGATGGATTACTGACTACCGGATTTATTTTTCATCCAGTCCGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATCGTGACATTGAATATCTTGTTACTGGTAATGGAACTTTCTCAACCCATGCCTATACCAAAAATAAGGTCAAAACATGAATAACAAAAGAAAAAGAACACACCTTAATATCGTATATGGTTAAGCATCTTTAGGCAATTACTAGACATATACTAAAGATGCCAAGAGATGTCAGATAGCCAAAGGAAGCTCATTAGTGCATATATACCCAGGAATGCATTCTATAGGCTCCTGTCACTAAAATAATACCATTATACCGACACTAATGAGTGTATATGTAGATTCCTTTTCACAGTACTAAAGTAGTTGGAGTCATAGAATTAATATAAATGATGTTTCTCTTACTTTAGATGAAATTAATGAGTTTGACCTGCAGGGCGGTCACATAATCTTCTTTCAAAGCCTCATTCTTTTAGGTAACTATCTATTCCCACTTGATGTTGGCGCCTTTATTTGCATGCTAAAGGACAATGTAATATTGAAGGTGGTTGTAGTTTGTGTTGCACTAGCTTGGAGTTCTTGGGCAGCATACCCCTTCAT</genome_strand>
        <mrna_strand>CGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTGATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAAGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291603" ref_strand="+" ref_description="SGN-E291603 [cLET-6-N21]">
      <seq>ctgttcctgccattccatctccaccacccctaccttcatctggacagtcaaatatagctgctaccggattcggatcgcctcccaatacccttaccgaacccgtttgggataccgtcaaaagagatctgtccagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaagctcttcgtgattgggatctatggggacctttcttcttcattgttttccttggtctcactttgtcatggtctgcttctgttaagaagtctgaggtttttgctgttgcatttgctctgctggctgccggtgctgtcattctgacactgaatgtattgttactgggcggtcatataatcttcttccaaagtctcagtctgctgggttactgtctattcccgcttgatattggtgctttcatttgcatgctaaaggacaacgtgatattgaaggtagttgtagtatgtgttgcactagcttggagctcttgggcggcataccccttcatgagtaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="+" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="18319" stop="25957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18619" g_stop="18899" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18900" i_stop="25062" i_length="6163">
            <donor d_prob="0.957" d_score="0.88"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25063" g_stop="25137" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="356" r_length="75" r_score="0.920"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25138" i_stop="25486" i_length="349">
            <donor d_prob="0.857" d_score="0.90"/>
            <acceptor a_prob="0.477" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25487" g_stop="25657" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="527" r_length="171" r_score="0.877"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="+" ref_id="SGN-E291603" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18619" e_stop="18899"/>
          <exon e_start="25063" e_stop="25137"/>
          <exon e_start="25487" e_stop="25657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTCCCGCCATTTCATCTCCACAACCCCTACCTTCATCGGTACAGTCGAATATAGCTGCTACTGGATTTGGATCGCCTCCCAATACCCTTATAGAACCCGTTTGGGATACCGTCAAAAGAGATCTGCCTAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAGGCTCTTCGTGATTAAGATCTATGAGGACCTTTCTTCTACATTGTTTTCATTGGTGTCACTTTGTCATGGTCTACTTTTGTTAAAAAGGTACATTGTCAAATTTTATCAACAAGCTTACCACTTTACTGTTCAAACTATCGGTTGAGTCTAATCTACTTGTGTCTTATGCTAGAAGGTACTCAATTCTGTTAATGTTTTAGAAGTATTTCTTTTGTAGTTTTGATTTATATCGTGTGTAATTCCAATTTACTCTGGCACAAGGGGCACTCATATAAGATCCAAATTATAGCTAAATAGAAAGGATAATGCTTTGAATTACAAGTGCCGGAGGAACAAATGAAAGAACTAGAGTTTTATATGTTGGCAAACAGCTGATCAAAACTTACATAGGTCAAAAGGATAACTTTAATACCATTAAATGTTTCAATACCAGGTGCATAAATTCTTCCAAGGAAAAACTAGAAGTGTGTGATTACTTTTCTTTTCAGATATAATCTTCATTGTTTATGAGGGAAAGGATTGTCCCATATAGGAGATAACATCCTGTTTTCTTAATCAATAGGTGACTAATAATACTCCCTCGCCAGCCAAAGATTGGACATCTATGGCATGGAAAACATAACATGATGACCCAATATTGGGTAAACCAAGAACGAAAATGAGTCTAACTCTAATACAATGTGAAGAAATGGATCTTCAGCCTAATCCAACCTAAAAACTAGCTTATGAGGGATGATTCCCTATGACCATATAAGGAGAGCACAACCAATTCCCTCAATCAATATCAGACTTAATAGTTAACACTTCCCCATATGATGAGGACTGGACAATTGGAGCATGTATAACATAACACAGGGATCCAACAATGAGAAGTACACCAACATAGATCAGTGAGTTTTGCTTTGATACCATGATATGACATGGCTATGCTGCCCTTCCCTTGTTCAAGAGAAAGGGAGGACTTTCTTTTAGCTACCGACAACTATGAGCTATATTTTTCTTCCTTTTCTTGTTGTATATTATTGGAATGTAATGAGCTTAAATGAATCAGAAGTGACATAAGTGGATTCATTCAGCCAGCCAACTAGTCTGGGATTTGAGGGATAGTTGTTTTTTTACTAAAAAAAACAACAACTTTATTGTAGTTTCTTGCATGTCCTTTCTTGGTTCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACATTCTTAATTGTCTCTACATTTCACCATAAACCCCAACTATTTTTTTGGCTCCTCATCTAGATCCATCTCAAAAGAGAACTCTTGGAAGTGCCTAAGTTTTCAACTTTTTGCTATCTAGCTGTGTATTTTTATCACAGTTCACATCATAATCATGTGGCAGTCCTACTCCTTCCCCTTATAAGTTTCTGTCTTCTTATGGACATGTCCTATAGACTTGCTAGGGTATAGCTAGCTTGGTCTTAAATGACTATAAAGACAACACAATTGAATGGGAGAAAATAGTTCTATTTATTTTGTGCACGGAAGTCCAACATGCATAGAGTTATATTCTGTTTGTCTATTGCCTTTATTTTTTATGACAAGGTAACAAACTATAAATAAATCATAAACACAAAAATGTTTGTAACCAAAGTGAACGTTTACATCAGTGGATCCAAACCCAAAGTATAAACAAGAGAAAGAGCTAAGCTCTTTATCATCTTGTTAAGAACCTTATGATGTCTATAACAGGAACAAAAACATCTATATACTCTAATTCACATCAATAACAAAAGTTAAGATACAATTCTCTTACGTTTTTGTAAGGAACTACTAGTATCTTCAGAACACCTAGATTCCTGTTTAGAAAAAATAAATAATAGGTACTAATATGTTATTAGGCTCAGTTAATGAGGTAGTTACCTAAGGTCCTTTTCGGACTTCTTGTATCGATACCTTCTCTGGTGGTATTCGATCGTCGAGATTTATTCTTAGTCTCATTTTCCTGCTTTTAAGTCTTTTATTGGTCATGGATAATTTTATTTATTTCAGATTTGTGAGAAAGTTGTTTGACATTATTGAGTCTAAGGTATATGAGTGAGAGATGGTATGAATGGGTGGAGAGTTTCATAGTGTGTATTAGGAGAATGTCTTCAAGTCTTGATGCCCTGCATCGGGTGTCGCAAAGGCTCAGAGAAGCATTAGATATTAGAGGTAGAGTGTACAAGACAAAGGGAAGCAGAGATAAGGCTACGAGCCTCTTCTATGCCTGAAGTTCAATAAACCTGGTCGCTTTATTTTTGTCTTTGCTGTCAAAGGGGGTTCTAGGTCAGTTACTATTGTGGCAGAGAACATATTTAATGAGGGCTACACAGTTGACTTTGGGTTCAAAGTTTGCCTGCCTCGTTAAAGATAAAGTTAGACAGGGGGCCTTAAATACCAAAAGGACAAGGGATGTCAGATTATTAAGTGATGAAAGAAGCTTTAAAGAAGTATTAAATAAATCTACATGGATCCATGATGGTGATAATGGGGAGATATGACGGCTTCCATGGGGGGAACAAAGCTGTCTCATGTTAAGAATTCCCTCTTAGAAGATGCTTAGGTTCAGTTTCGCTGAGTGCAATGAAATCCCTTCACAAGATGATGTCAAAAAATGGTCACATTAAGCTTGGATTGGAATATATAACCTCCAAGTGTTTGACATGAACGAGAGTTCATTCCTATTTGATTTTCAAAGTGTGAAGGACGCAGAGCATGTCATGAAAGAATCTTGATAAAACCAGGGAAGCAGTCTCAAGCTGGATTGGTGGTCTTCATTCATCAATAGGTAGAGCATACTCAATTAGTACCAATTTCAAATAGTATTGGATTAGGGATCTAGGTCTGCCACTTTAACTATGGTCCATTAGGGGTTATAAAGCAGATTGGAGAAAACTATGGCGGGTGGTTGGAGAAGTAGCTCAAGAATCACTTGAGATGGGCTTGAGTTAAAGTAATGGTCGCTGAAAAATGTTCGGACGTTGGTTGAGCTCAGGGATGGGGAATGGAGATTCAATTTACAAGTATGGGTAGAAGCGCCGACAAAATTTGAAAAAAGTTTTGTTGTTGAACTCTCAAGAGGGGGCAAAACTTTTCACAGAAAAGGAGTTAACAGCTTGTGTTAGTTAACTGTGGAGAAAGGGAAAACACCAAGAAAGGCGAAAGGGCTAATAGCTAGGAAAGATCTGTTGGATATTGGATACGATTGAGGTTTTTACACAATGGACAAAGATGATGTGCACGTGACTGGATGCAACAATTCAAAAGGAGTAGGGTCAGTGGATCAATTTTACTCCAGATCGCCTTCTCTTCGTTTAAATGAAAGTGGGCCTTCCTCTCATTTTAATGAGAAAATACAGAAAGGCTTAATTAAAAAGCCTACAACTGAGCCTTTCATTGAAAGCATAAACGCTCATGTGGGCATTGTATAGGGGCTGCGAATTGCGACAGGTTTTAACTATGAAGATGAAGCAAGGGATGCTCATAAGAGAAAGGGCTGAGGATCACATGTAGAGAATCGACACAAACCATGAAGCATATGTGATCATAATTCCATTAGAGTTGATCTCGGAAACTGAGTTGATTGATGCAGATGAGATAACATGAAAAACAAGGGAAGGACACAAATGCAGCTGATTCCGATTGAAGAGCCTGCACCTATCCAATATGACCTAAGTGAGTGTAATAATAAGGTGGAATCTGATGCAATATCTTGGGTGCATCAAAATACAATTACATTAAGGAAGGAATTTGAATCCATTTTAATGGTTTGGAAAAAGATGCAGAGGCCCTCTTTGAGAGGCTAGATCAAAGAAGAGAAGTTTCACAGTCAAACAAATATAACAACCTTTTGATCCCAAAAGAGGTTAGAAATTTAATCTTTGAGGTCAATTATAACGATGAGGAATGTAGGAGTGAGCTAAGAAAGGGGAGACGACCACCAATTAGAGATCAATAAAGGTTAAAACTATGTCATGACACGTGAGGGGTTTGAATGGGGCAAACAAGAGGAGGCTGGTAAAACAAGTAATTCACAAGTGGGGGGCAAACATTTGTGTTCTTTTAGAAACAAAGATTGGAGGGTAAGTAATTTAATGAGGGAGTTGTGGGCTAATGGATCAGAGAAGTACATTTGGAGGCCAGGAATAGTAGAGGAGGGATTTTGATATGTGGGATAAAAGGGAGTGGGTAGGAGAACTAGTGTAGATTTCCGGCCAGATGATAACATGTAAAATCACAGTGTTTCCTTCATTCTTAAACTCATGCCCTGTCAAACTATACAACTTTGCCACATTAATTTCAATGGAGAGATTGTGTATACCTCAATTTGTTGTTTCAAAGGTTTGAGCATCACGTTTTACCTAATTTTGATTATTGGATGGTTGACAAGTGCATAGTTACTTTCCTTGGTAAAGAACTAGTTACCTTTGATATCCTTTATGCAACAACAAGGGAAAGATTGCAGAGAAACAACTATAGTAGCCCATTCAGTATCTCGAATATCTTGACTCTTGAGATATATATGTTGATTATGAGAGACTTCCAAACTATTAAGCTGGTAAGATTCCAATTTGTGCTTTGTTAGGATGACTAGTGGTTACTGAAAAAAGGTAATGTATTCAGCTGGAGGAAGCGGAAAGAGAGGGATTTAAGTGCATTTTATCTATGCATTTTAGTTTCTTTATTGCAACTATCAATCTTATTTAGTGTATACGGGTTATATAACGAGGATGAAAACAAGATCATTTATCCTTGATTTTCTTGCTTTGTGCTTGTGAGATCTTTTCTTGTTTTTCTTGCTTTGCTTAGCTTAAAATATTCTAGAAATTTTCTTTATCAAGAAAATTTCTAGCAATTTCTTGGCTGTCCTGTGAAGGCCCTTTCTGCGTTTTTGCTTTACCTCTTCATTTTAAGTTGTTGAGGTCGAGGTTTAAGTGACTTGTGCTCAAAGTTTATATTGATGTTGTCACATGCCCTTCTTCCACTTTAATGCAGCTTCACCATCTTATCTCATGTTGGGAGATTAATTAACTTGGAGTAGATAACCGATGATCACAAAGAGGAAGTTACAAGTACTGATCTGACTTTGTCTAGCTTACTTGAATAATAAAAAAAGAGAAAATCAGATGTATATTGTTAAGAATTTACTGGTCTTAAGAAGGAGAAGCAGAAGTGGTAGAAGAAGAGAAGATGCTATGGGAGGGAATGGAGTATAAGCAGAACTCTTAACAAGGGTGCAAATTATAAACGTGTAATTCTAGTGTCAATACTCAATAGTCCTCTACTCCTCTTCTATGTAAAACTATTCAAGCTTGTATATATGATGGAAGACGAGTGTCATGGCTACTTCATAGACTTCCCAAAAATGGTTGGTCAAAACTAGGACTTACAGTGAGACTTACTTGGTCAACCAGAAAGACATCAGTGCATATTTTGCTATACCCTGGGGAAAATATGAATGAAGAAGCATGTTAAACAACCTCAAACTTTTCTGTTTCATTAACTGGAAAGATTCTTCTAAACCTGTCGGCCAAAGAGAAACCTGCACTTTTAACTTGGTATTGGTATAAATGTGATATGTCAGTCCTAAACTCAAGATCACTCAGTTCTGTCTTTTGTTTGCACACCCCAATACCTTATTCAAAAAAAAATGATCACTTAGTTTTCATGCATCTCACTGTGGATAGTTCTTATTCATGTCTAAATGAACCTTTTGCAGTTGTTTTTGCATTTCTTTATTATTTTAAATTTTTTGCTTTTTTGTTGTTACTAGTTATCTCTTATTCAACATGTTGTGAGGAGTTACCTTCCAAGTTTGTGAACAATCAGCAATGTTTCTGTGGACCCATTAACAAACCATCAAGAGATTATCGAATGTCAAGTGGAAATGTTGTTTGTCTAGACAGTTATTTTCAGACAATTTGATGTAATGAATAATTCTAGATCAGCTTTTGGACTGTTGAAACTTAGGTCCGGCCGGATCTTGCTCGATTATGGCATGTTGTCTTGTTACTGTAACGAAGTCCACAGGCAGACATTATTTTACTCTTTTCTTTTATACTTCGTTTAGTTGCCTATGGTTTTATATACCGTAACCAAAATAGCTTGGACTGTTTATATAACCAAACTGAACTAGCTGCAGCTGAAGCTTATGTGATTGATTAATTGATATTTAATTTCTTGTGGTTTGAGTGATTTTGTGATGGATTACTGACTACCGGATTTATTTTTCATCCAGTCCGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATCGTGACATTGAATATCTTGTTACTGGTAATGGAACTTTCTCAACCCATGCCTATACCAAAAATAAGGTCAAAACATGAATAACAAAAGAAAAAGAACACACCTTAATATCGTATATGGTTAAGCATCTTTAGGCAATTACTAGACATATACTAAAGATGCCAAGAGATGTCAGATAGCCAAAGGAAGCTCATTAGTGCATATATACCCAGGAATGCATTCTATAGGCTCCTGTCACTAAAATAATACCATTATACCGACACTAATGAGTGTATATGTAGATTCCTTTTCACAGTACTAAAGTAGTTGGAGTCATAGAATTAATATAAATGATGTTTCTCTTACTTTAGATGAAATTAATGAGTTTGACCTGCAGGGCGGTCACATAATCTTCTTTCAAAGCCTCATTCTTTTAGGTAACTATCTATTCCCACTTGATGTTGGCGCCTTTATTTGCATGCTAAAGGACAATGTAATATTGAAGGTGGTTGTAGTTTGTGTTGCACTAGCTTGGAGTTCTTGGGCAGCATACCCCTTCATAAGTACA</genome_strand>
        <mrna_strand>CTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG.............................................................................................................................................................................................................................................................................................................................................................GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATATTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E578429" ref_strand="+" ref_description="SGN-E578429 [LE12DH05]">
      <seq>ttcccgccatttcatctccacaacccctaccttcatcggtacagtcgaatatagctgctactggatttggatcgcctcccaatacccttatagaacccgtttgggataccgtcaaaagagatctgcctagaattgttagtaatttgaagctggtggttttccctaatccttatagagaagatcctggcaaggctcttcgtgattaagatctatgaggacctttcttctacattgttttcattggtgtcactttgtcatggtctacttttgttaaaaagttatctcttattcaacatgttgtgaggagttaccttccaagtttgtgaacaatcagcaatgtttctgtggacccattaacaaaccatcaagagattatcgaatgtcaagtggaaatgttgtttgtctagacagttattttcagacaatttgatgtaatgaataattctagatcagcttttggactgttgaaacttaggtccggccggatcttgctcgattatggcatgttgtcttgttactgtaacgaagtccacaggcagacattattttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="+" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="18322" stop="25169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18622" g_stop="18899" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18900" i_stop="24597" i_length="5698">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.397" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24598" g_stop="24869" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="550" r_length="272" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="551" polyA_stop="564"/>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="+" ref_id="SGN-E578429" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18622" e_stop="18899"/>
          <exon e_start="24598" e_stop="24869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCGCCATTTCATCTCCACAACCCCTACCTTCATCGGTACAGTCGAATATAGCTGCTACTGGATTTGGATCGCCTCCCAATACCCTTATAGAACCCGTTTGGGATACCGTCAAAAGAGATCTGCCTAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAGGCTCTTCGTGATTAAGATCTATGAGGACCTTTCTTCTACATTGTTTTCATTGGTGTCACTTTGTCATGGTCTACTTTTGTTAAAAAGGTACATTGTCAAATTTTATCAACAAGCTTACCACTTTACTGTTCAAACTATCGGTTGAGTCTAATCTACTTGTGTCTTATGCTAGAAGGTACTCAATTCTGTTAATGTTTTAGAAGTATTTCTTTTGTAGTTTTGATTTATATCGTGTGTAATTCCAATTTACTCTGGCACAAGGGGCACTCATATAAGATCCAAATTATAGCTAAATAGAAAGGATAATGCTTTGAATTACAAGTGCCGGAGGAACAAATGAAAGAACTAGAGTTTTATATGTTGGCAAACAGCTGATCAAAACTTACATAGGTCAAAAGGATAACTTTAATACCATTAAATGTTTCAATACCAGGTGCATAAATTCTTCCAAGGAAAAACTAGAAGTGTGTGATTACTTTTCTTTTCAGATATAATCTTCATTGTTTATGAGGGAAAGGATTGTCCCATATAGGAGATAACATCCTGTTTTCTTAATCAATAGGTGACTAATAATACTCCCTCGCCAGCCAAAGATTGGACATCTATGGCATGGAAAACATAACATGATGACCCAATATTGGGTAAACCAAGAACGAAAATGAGTCTAACTCTAATACAATGTGAAGAAATGGATCTTCAGCCTAATCCAACCTAAAAACTAGCTTATGAGGGATGATTCCCTATGACCATATAAGGAGAGCACAACCAATTCCCTCAATCAATATCAGACTTAATAGTTAACACTTCCCCATATGATGAGGACTGGACAATTGGAGCATGTATAACATAACACAGGGATCCAACAATGAGAAGTACACCAACATAGATCAGTGAGTTTTGCTTTGATACCATGATATGACATGGCTATGCTGCCCTTCCCTTGTTCAAGAGAAAGGGAGGACTTTCTTTTAGCTACCGACAACTATGAGCTATATTTTTCTTCCTTTTCTTGTTGTATATTATTGGAATGTAATGAGCTTAAATGAATCAGAAGTGACATAAGTGGATTCATTCAGCCAGCCAACTAGTCTGGGATTTGAGGGATAGTTGTTTTTTTACTAAAAAAAACAACAACTTTATTGTAGTTTCTTGCATGTCCTTTCTTGGTTCAGTTCTCTTTTCTTCTATCTCCACTTCTTTAATGTGCTTACATTCTTAATTGTCTCTACATTTCACCATAAACCCCAACTATTTTTTTGGCTCCTCATCTAGATCCATCTCAAAAGAGAACTCTTGGAAGTGCCTAAGTTTTCAACTTTTTGCTATCTAGCTGTGTATTTTTATCACAGTTCACATCATAATCATGTGGCAGTCCTACTCCTTCCCCTTATAAGTTTCTGTCTTCTTATGGACATGTCCTATAGACTTGCTAGGGTATAGCTAGCTTGGTCTTAAATGACTATAAAGACAACACAATTGAATGGGAGAAAATAGTTCTATTTATTTTGTGCACGGAAGTCCAACATGCATAGAGTTATATTCTGTTTGTCTATTGCCTTTATTTTTTATGACAAGGTAACAAACTATAAATAAATCATAAACACAAAAATGTTTGTAACCAAAGTGAACGTTTACATCAGTGGATCCAAACCCAAAGTATAAACAAGAGAAAGAGCTAAGCTCTTTATCATCTTGTTAAGAACCTTATGATGTCTATAACAGGAACAAAAACATCTATATACTCTAATTCACATCAATAACAAAAGTTAAGATACAATTCTCTTACGTTTTTGTAAGGAACTACTAGTATCTTCAGAACACCTAGATTCCTGTTTAGAAAAAATAAATAATAGGTACTAATATGTTATTAGGCTCAGTTAATGAGGTAGTTACCTAAGGTCCTTTTCGGACTTCTTGTATCGATACCTTCTCTGGTGGTATTCGATCGTCGAGATTTATTCTTAGTCTCATTTTCCTGCTTTTAAGTCTTTTATTGGTCATGGATAATTTTATTTATTTCAGATTTGTGAGAAAGTTGTTTGACATTATTGAGTCTAAGGTATATGAGTGAGAGATGGTATGAATGGGTGGAGAGTTTCATAGTGTGTATTAGGAGAATGTCTTCAAGTCTTGATGCCCTGCATCGGGTGTCGCAAAGGCTCAGAGAAGCATTAGATATTAGAGGTAGAGTGTACAAGACAAAGGGAAGCAGAGATAAGGCTACGAGCCTCTTCTATGCCTGAAGTTCAATAAACCTGGTCGCTTTATTTTTGTCTTTGCTGTCAAAGGGGGTTCTAGGTCAGTTACTATTGTGGCAGAGAACATATTTAATGAGGGCTACACAGTTGACTTTGGGTTCAAAGTTTGCCTGCCTCGTTAAAGATAAAGTTAGACAGGGGGCCTTAAATACCAAAAGGACAAGGGATGTCAGATTATTAAGTGATGAAAGAAGCTTTAAAGAAGTATTAAATAAATCTACATGGATCCATGATGGTGATAATGGGGAGATATGACGGCTTCCATGGGGGGAACAAAGCTGTCTCATGTTAAGAATTCCCTCTTAGAAGATGCTTAGGTTCAGTTTCGCTGAGTGCAATGAAATCCCTTCACAAGATGATGTCAAAAAATGGTCACATTAAGCTTGGATTGGAATATATAACCTCCAAGTGTTTGACATGAACGAGAGTTCATTCCTATTTGATTTTCAAAGTGTGAAGGACGCAGAGCATGTCATGAAAGAATCTTGATAAAACCAGGGAAGCAGTCTCAAGCTGGATTGGTGGTCTTCATTCATCAATAGGTAGAGCATACTCAATTAGTACCAATTTCAAATAGTATTGGATTAGGGATCTAGGTCTGCCACTTTAACTATGGTCCATTAGGGGTTATAAAGCAGATTGGAGAAAACTATGGCGGGTGGTTGGAGAAGTAGCTCAAGAATCACTTGAGATGGGCTTGAGTTAAAGTAATGGTCGCTGAAAAATGTTCGGACGTTGGTTGAGCTCAGGGATGGGGAATGGAGATTCAATTTACAAGTATGGGTAGAAGCGCCGACAAAATTTGAAAAAAGTTTTGTTGTTGAACTCTCAAGAGGGGGCAAAACTTTTCACAGAAAAGGAGTTAACAGCTTGTGTTAGTTAACTGTGGAGAAAGGGAAAACACCAAGAAAGGCGAAAGGGCTAATAGCTAGGAAAGATCTGTTGGATATTGGATACGATTGAGGTTTTTACACAATGGACAAAGATGATGTGCACGTGACTGGATGCAACAATTCAAAAGGAGTAGGGTCAGTGGATCAATTTTACTCCAGATCGCCTTCTCTTCGTTTAAATGAAAGTGGGCCTTCCTCTCATTTTAATGAGAAAATACAGAAAGGCTTAATTAAAAAGCCTACAACTGAGCCTTTCATTGAAAGCATAAACGCTCATGTGGGCATTGTATAGGGGCTGCGAATTGCGACAGGTTTTAACTATGAAGATGAAGCAAGGGATGCTCATAAGAGAAAGGGCTGAGGATCACATGTAGAGAATCGACACAAACCATGAAGCATATGTGATCATAATTCCATTAGAGTTGATCTCGGAAACTGAGTTGATTGATGCAGATGAGATAACATGAAAAACAAGGGAAGGACACAAATGCAGCTGATTCCGATTGAAGAGCCTGCACCTATCCAATATGACCTAAGTGAGTGTAATAATAAGGTGGAATCTGATGCAATATCTTGGGTGCATCAAAATACAATTACATTAAGGAAGGAATTTGAATCCATTTTAATGGTTTGGAAAAAGATGCAGAGGCCCTCTTTGAGAGGCTAGATCAAAGAAGAGAAGTTTCACAGTCAAACAAATATAACAACCTTTTGATCCCAAAAGAGGTTAGAAATTTAATCTTTGAGGTCAATTATAACGATGAGGAATGTAGGAGTGAGCTAAGAAAGGGGAGACGACCACCAATTAGAGATCAATAAAGGTTAAAACTATGTCATGACACGTGAGGGGTTTGAATGGGGCAAACAAGAGGAGGCTGGTAAAACAAGTAATTCACAAGTGGGGGGCAAACATTTGTGTTCTTTTAGAAACAAAGATTGGAGGGTAAGTAATTTAATGAGGGAGTTGTGGGCTAATGGATCAGAGAAGTACATTTGGAGGCCAGGAATAGTAGAGGAGGGATTTTGATATGTGGGATAAAAGGGAGTGGGTAGGAGAACTAGTGTAGATTTCCGGCCAGATGATAACATGTAAAATCACAGTGTTTCCTTCATTCTTAAACTCATGCCCTGTCAAACTATACAACTTTGCCACATTAATTTCAATGGAGAGATTGTGTATACCTCAATTTGTTGTTTCAAAGGTTTGAGCATCACGTTTTACCTAATTTTGATTATTGGATGGTTGACAAGTGCATAGTTACTTTCCTTGGTAAAGAACTAGTTACCTTTGATATCCTTTATGCAACAACAAGGGAAAGATTGCAGAGAAACAACTATAGTAGCCCATTCAGTATCTCGAATATCTTGACTCTTGAGATATATATGTTGATTATGAGAGACTTCCAAACTATTAAGCTGGTAAGATTCCAATTTGTGCTTTGTTAGGATGACTAGTGGTTACTGAAAAAAGGTAATGTATTCAGCTGGAGGAAGCGGAAAGAGAGGGATTTAAGTGCATTTTATCTATGCATTTTAGTTTCTTTATTGCAACTATCAATCTTATTTAGTGTATACGGGTTATATAACGAGGATGAAAACAAGATCATTTATCCTTGATTTTCTTGCTTTGTGCTTGTGAGATCTTTTCTTGTTTTTCTTGCTTTGCTTAGCTTAAAATATTCTAGAAATTTTCTTTATCAAGAAAATTTCTAGCAATTTCTTGGCTGTCCTGTGAAGGCCCTTTCTGCGTTTTTGCTTTACCTCTTCATTTTAAGTTGTTGAGGTCGAGGTTTAAGTGACTTGTGCTCAAAGTTTATATTGATGTTGTCACATGCCCTTCTTCCACTTTAATGCAGCTTCACCATCTTATCTCATGTTGGGAGATTAATTAACTTGGAGTAGATAACCGATGATCACAAAGAGGAAGTTACAAGTACTGATCTGACTTTGTCTAGCTTACTTGAATAATAAAAAAAGAGAAAATCAGATGTATATTGTTAAGAATTTACTGGTCTTAAGAAGGAGAAGCAGAAGTGGTAGAAGAAGAGAAGATGCTATGGGAGGGAATGGAGTATAAGCAGAACTCTTAACAAGGGTGCAAATTATAAACGTGTAATTCTAGTGTCAATACTCAATAGTCCTCTACTCCTCTTCTATGTAAAACTATTCAAGCTTGTATATATGATGGAAGACGAGTGTCATGGCTACTTCATAGACTTCCCAAAAATGGTTGGTCAAAACTAGGACTTACAGTGAGACTTACTTGGTCAACCAGAAAGACATCAGTGCATATTTTGCTATACCCTGGGGAAAATATGAATGAAGAAGCATGTTAAACAACCTCAAACTTTTCTGTTTCATTAACTGGAAAGATTCTTCTAAACCTGTCGGCCAAAGAGAAACCTGCACTTTTAACTTGGTATTGGTATAAATGTGATATGTCAGTCCTAAACTCAAGATCACTCAGTTCTGTCTTTTGTTTGCACACCCCAATACCTTATTCAAAAAAAAATGATCACTTAGTTTTCATGCATCTCACTGTGGATAGTTCTTATTCATGTCTAAATGAACCTTTTGCAGTTGTTTTTGCATTTCTTTATTATTTTAAATTTTTTGCTTTTTTGTTGTTACTAGTTATCTCTTATTCAACATGTTGTGAGGAGTTACCTTCCAAGTTTGTGAACAATCAGCAATGTTTCTGTGGACCCATTAACAAACCATCAAGAGATTATCGAATGTCAAGTGGAAATGTTGTTTGTCTAGACAGTTATTTTCAGACAATTTGATGTAATGAATAATTCTAGATCAGCTTTTGGACTGTTGAAACTTAGGTCCGGCCGGATCTTGCTCGATTATGGCATGTTGTCTTGTTACTGTAACGAAGTCCACAGGCAGACATTATTTTA</genome_strand>
        <mrna_strand>TTCCCGCCATTTCATCTCCACAACCCCTACCTTCATCGGTACAGTCGAATATAGCTGCTACTGGATTTGGATCGCCTCCCAATACCCTTATAGAACCCGTTTGGGATACCGTCAAAAGAGATCTGCCTAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAGGCTCTTCGTGATTAAGATCTATGAGGACCTTTCTTCTACATTGTTTTCATTGGTGTCACTTTGTCATGGTCTACTTTTGTTAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCTCTTATTCAACATGTTGTGAGGAGTTACCTTCCAAGTTTGTGAACAATCAGCAATGTTTCTGTGGACCCATTAACAAACCATCAAGAGATTATCGAATGTCAAGTGGAAATGTTGTTTGTCTAGACAGTTATTTTCAGACAATTTGATGTAATGAATAATTCTAGATCAGCTTTTGGACTGTTGAAACTTAGGTCCGGCCGGATCTTGCTCGATTATGGCATGTTGTCTTGTTACTGTAACGAAGTCCACAGGCAGACATTATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549386" ref_strand="-" ref_description="SGN-E549386 [TUS-69-P2](-)">
      <seq>ttttttttttaacatcaaatggaaaatcaaataaattttttaaaaactacaaagtagatgagcaatagagataagtaatggatacaaaggagatgctcgcctttgtttggaatgaagatgaatgaacacacacttgagtctggaattgataaaattaggagaaaacatgataacagtcactatacttgagcacatgcaagacatgaccgcgactttaactttatcataaattagagctctttcttgacgttgttgttataattcttggaatgaaaatcaagaaagagcactaataatgatgcattaaaaacaataccaaaacaccatgctccaactccagtgcatccaaactcagttgtaaagtgataatacaacatcaaagccgatattataaaccctagcataaattgatatatttgacaatttgtcaccacttttttccaccatggcctttttcctatcgcggataggaaataatatgcatacattataacatgaatcgaagcattgactataagagcaagtcccaacatggactgtgcatattgaagcccaatataaccaagaaccgtcacaagtgtgtggtgatagacatgaaggaacgataaccttcttgatctagaactacttaggacgattaaaagtgtatcaataaattcaagaatttttgaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="+" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="56011" stop="57278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56037" g_stop="56043" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="0.857"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56044" i_stop="56310" i_length="267">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56311" g_stop="56978" g_length="668"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="675" r_length="668" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="+" ref_id="SGN-E549386" ref_strand="-">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549386" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="56037" e_stop="56043"/>
          <exon e_start="56311" e_stop="56978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTATATATCTTTTAAATATTTTAAATTATGATAAATAATACTTTTTAAATCATTTTAAAATAGTGCCAATAGTTCAAAATATTAAAAGTAGCCTTAAGAGTTGCAAGTTGACGACAACAACCTACTTGTAGTCTCTTTAAGTCTATCTCCTATAATAAATTATATGTCTAAGACATAAATTGAGATAAAGTAAGAGAAAAATTATCTAGCTAACAAAAAATGAAACTTGAAGTTTAATTTGAATTTAACTGAAACTTCAATAATAAGAGCATCTAACATCAAATGGAAAATCAAATAAAATTTTTAAAAACTACAAAGTAGATAAGCAATAGAGATAAGCAATGGATACAAAGGAGATGCTCGCCTTTGTTTGGAATGAAGATGAATGAACACACACTTGAGTCTGGAATTGATAAAATTAGGAGAAAACATGATAGCAGTCACTATACTTGGGCACATGCGAGACATGACCGCCACTTTAACTTAATCATAAATTAGAGCTCTTTCTTGACGTTGTTGTTATAATTCTTGGAATGAAAATCAAGAAAGAGCACTAATAATGATGCATTAAAAACAATACCAAAACACCATGCTCCAACTCCAGTGCATCCAAACTCAGTTGTAAAGTGATAATACAACATCAAAGCCGATATTATAAACCCTAGCATAAATTGATATATTTGACAATTTGTCACCACTTTTTTCCACCATGGCCTTTTTCCTATCGCGGATAGGAAATAATATGCATACATTATAACATGAATCGAAGCGTTGACTATAAGAGCAAGTCCCAACATGGACTGTGCATATTGAAGTCCAATATAGCCAAGAACCGTCACAAGTGTGTGGTGATAGACATGAAGGAATGATAACCTTCTTGATCTAGAACTACTTAGGACGATTAAAAGTGTATCAATAAATTCAAGAATTTTTGAGAGA</genome_strand>
        <mrna_strand>TTTTTTT...........................................................................................................................................................................................................................................................................TTTAACATCAAATGGAAAATCAAATAAATTTTTTAAAAACTACAAAGTAGATGAGCAATAGAGATAAGTAATGGATACAAAGGAGATGCTCGCCTTTGTTTGGAATGAAGATGAATGAACACACACTTGAGTCTGGAATTGATAAAATTAGGAGAAAACATGATAACAGTCACTATACTTGAGCACATGCAAGACATGACCGCGACTTTAACTTTATCATAAATTAGAGCTCTTTCTTGACGTTGTTGTTATAATTCTTGGAATGAAAATCAAGAAAGAGCACTAATAATGATGCATTAAAAACAATACCAAAACACCATGCTCCAACTCCAGTGCATCCAAACTCAGTTGTAAAGTGATAATACAACATCAAAGCCGATATTATAAACCCTAGCATAAATTGATATATTTGACAATTTGTCACCACTTTTTTCCACCATGGCCTTTTTCCTATCGCGGATAGGAAATAATATGCATACATTATAACATGAATCGAAGCATTGACTATAAGAGCAAGTCCCAACATGGACTGTGCATATTGAAGCCCAATATAACCAAGAACCGTCACAAGTGTGTGGTGATAGACATGAAGGAACGATAACCTTCTTGATCTAGAACTACTTAGGACGATTAAAAGTGTATCAATAAATTCAAGAATTTTTGAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265434" ref_strand="+" ref_description="SGN-E265434 [cLEI-9-F15]">
      <seq>ggacggttcttggctatattggacttcaatatgcacagtccatgttgggacttgctcttatagtcaacgcttcgattcatgttataatgtatgcatattatttcctatccgcgataggaaaaaggccatggtggaaaaaagtggtgacaaattgtcaaatatatcaatttatgctagggtttataatatcggctttgatgttgtattatcactttacaactgagtttggatgcactggagttggagcatggtgttttggtattgtttttaatgcatcattattagtgctctttcttgattttcattccaagaattataacaacaacgtcaagaaagagctctaatttatgattaagttaaagtggcggtcatgtctcgcatgtgcccaagtatagtgactgctatcatgttttctcctaattttatcaattccagactcaagtgtgtgttcattcatcttcattccaaacaaaagcgagcatctcctttgtatccattgcttatctctattgcttatctactttgtagtttttaaaaattttatttgattttccatttgatgttagatgctcttattattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="57176" stop="55996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56877" g_stop="56296" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E265434" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56877" e_stop="56296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCACTTTACAACTGAGTTTGGATGCACTGGAGTTGGAGCATGGTGTTTTGGTATTGTTTTTAATGCATCATTATTAGTGCTCTTTCTTGATTTTCATTCCAAGAATTATAACAACAACGTCAAGAAAGAGCTCTAATTTATGATTAAGTTAAAGTGGCGGTCATGTCTCGCATGTGCCCAAGTATAGTGACTGCTATCATGTTTTCTCCTAATTTTATCAATTCCAGACTCAAGTGTGTGTTCATTCATCTTCATTCCAAACAAAGGCGAGCATCTCCTTTGTATCCATTGCTTATCTCTATTGCTTATCTACTTTGTAGTTTTTAAAAATTTTATTTGATTTTCCATTTGATGTTAGATGCTCTTATTATTGA</genome_strand>
        <mrna_strand>GGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCACTTTACAACTGAGTTTGGATGCACTGGAGTTGGAGCATGGTGTTTTGGTATTGTTTTTAATGCATCATTATTAGTGCTCTTTCTTGATTTTCATTCCAAGAATTATAACAACAACGTCAAGAAAGAGCTCTAATTTATGATTAAGTTAAAGTGGCGGTCATGTCTCGCATGTGCCCAAGTATAGTGACTGCTATCATGTTTTCTCCTAATTTTATCAATTCCAGACTCAAGTGTGTGTTCATTCATCTTCATTCCAAACAAAAGCGAGCATCTCCTTTGTATCCATTGCTTATCTCTATTGCTTATCTACTTTGTAGTTTTTAAAAATTTTATTTGATTTTCCATTTGATGTTAGATGCTCTTATTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348556" ref_strand="+" ref_description="SGN-E348556 [cTOF-30-J24]">
      <seq>tcttccacgtgggcctgtgttcttttggatttatatttgttatctctcaaaaattcttgaatttattgatacacttttaatcgtcctaagtagttctaagatcaagaaggttatcattccttcatgtctatcaccacacacttgtgacggttcttggctatattggacttcaatatgcacagtccatgttgggacttgctcttatagtcaacgcttcgattcatgttataatgtatgcatattatttcctatccgcgataggaaaaaggccatggtggaaaaaagtggtgacaaattgtcaaatatatcaatttatgctagggtttataatatcggctttgatgttgtattatcactttacaactgagtttggatgcactggagttggagcatggtgttttggtattgtttttaatgcatcattattagtgctctttcttgattttcattccaagaattataacaacaacgtcaagaaagagctctaatttatgattaagttaaagtggcggtcatgtctcgcatgtgcccaagtatagtgactgctatcatgttttctcctaattttatcaattccagaactcaagtgtgtgttcattcatcttcattccaaacaaaggcgagcatctcctttgtatccattgcttatctctattgcttatctacttttgtagtttttaaaaattttatttgattttccattttgatgttagatgctcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="57320" stop="56002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57020" g_stop="56302" g_length="719"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="723" r_length="723" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E348556" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57020" e_stop="56302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCCACGTGGGCCTGTGTTCTTTTGGATTTATATTTGTTATCTCTCAAAAATTCTTGAATTTATTGATACACTTTTAATCGTCCTAAGTAGTTCT-AGATCAAGAAGGTTATCATTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCACTTTACAACTGAGTTTGGATGCACTGGAGTTGGAGCATGGTGTTTTGGTATTGTTTTTAATGCATCATTATTAGTGCTCTTTCTTGATTTTCATTCCAAGAATTATAACAACAACGTCAAGAAAGAGCTCTAATTTATGATTAAGTTAAAGTGGCGGTCATGTCTCGCATGTGCCCAAGTATAGTGACTGCTATCATGTTTTCTCCTAATTTTATCAATTCCAG-ACTCAAGTGTGTGTTCATTCATCTTCATTCCAAACAAAGGCGAGCATCTCCTTTGTATCCATTGCTTATCTCTATTGCTTATCTAC-TTTGTAGTTTTTAAAAATTTTATTTGATTTTCCA-TTTGATGTTAGATGCTCTTAT</genome_strand>
        <mrna_strand>TCTTCCACGTGGGCCTGTGTTCTTTTGGATTTATATTTGTTATCTCTCAAAAATTCTTGAATTTATTGATACACTTTTAATCGTCCTAAGTAGTTCTAAGATCAAGAAGGTTATCATTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCACTTTACAACTGAGTTTGGATGCACTGGAGTTGGAGCATGGTGTTTTGGTATTGTTTTTAATGCATCATTATTAGTGCTCTTTCTTGATTTTCATTCCAAGAATTATAACAACAACGTCAAGAAAGAGCTCTAATTTATGATTAAGTTAAAGTGGCGGTCATGTCTCGCATGTGCCCAAGTATAGTGACTGCTATCATGTTTTCTCCTAATTTTATCAATTCCAGAACTCAAGTGTGTGTTCATTCATCTTCATTCCAAACAAAGGCGAGCATCTCCTTTGTATCCATTGCTTATCTCTATTGCTTATCTACTTTTGTAGTTTTTAAAAATTTTATTTGATTTTCCATTTTGATGTTAGATGCTCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546529" ref_strand="+" ref_description="SGN-E546529 [TUS-69-P2]">
      <seq>gttgaacatccaacaatcagccaatttgaatggaaacaaggtcacacttttggttcttccatttcttttcttactatttccgtctctgtttacttatgtctgactctcttgtcgattcgtttttctacatttatccctaccctcactaccaccaccattcgcaacattaccgcgatccacagcctcattctttgtctcctctctctactcatggtcattgccggcatcctttctgtcttacaccaaatgccacctcatgattggaagtggatcgtatgttttccaggtgccaatcatactcttccacgtggacctgtgttcttttggatttatatttgttatctttcaaaaattcttgaatttattgatacacttttaatcgtcctaagtagttctagatcaagaaggttatcgttccttcatgtctatcaccacacacttgtgacggttcttggttatattgggcttcaatatgcacagtccatgttgggacttgctcttatagtcaatgcttcgattcatgttataatgtatgcatattatttcctatccgcgataggaaaaaggccatggtggaaaaaagtggtgacaaattgtcaaatatatcaatttatgctagggtttataatatcggctttgatgttgtattatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="57619" stop="56367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57319" g_stop="56667" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E546529" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57319" e_stop="56667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAACATCCAACAATAAGCCAATTTGAATGGAAACAAGGTCACACTTTTGGTTCTTCCATTTCTTTTCTTACTATTTCCGTCTCTGTTTACTTGTGTCTGACTCTCTTGTCGATTCGTTTTTCTGCATTTATCCCTACCCTTACTACCACCACCATTCGCAACATTACCGCGATCCATAGCCTCATTCTTTGTCTCCTCTCTCTACTCATGGTCATTGCCGGCATCCTTTCTGTCTTACACCAAATGCCACCTCATGATTGGAAGTGGATCGTATGTTTTCCAGGTGCCAATCATACTCTTCCACGTGGGCCTGTGTTCTTTTGGATTTATATTTGTTATCTCTCAAAAATTCTTGAATTTATTGATACACTTTTAATCGTCCTAAGTAGTTCTAGATCAAGAAGGTTATCATTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCA</genome_strand>
        <mrna_strand>GTTGAACATCCAACAATCAGCCAATTTGAATGGAAACAAGGTCACACTTTTGGTTCTTCCATTTCTTTTCTTACTATTTCCGTCTCTGTTTACTTATGTCTGACTCTCTTGTCGATTCGTTTTTCTACATTTATCCCTACCCTCACTACCACCACCATTCGCAACATTACCGCGATCCACAGCCTCATTCTTTGTCTCCTCTCTCTACTCATGGTCATTGCCGGCATCCTTTCTGTCTTACACCAAATGCCACCTCATGATTGGAAGTGGATCGTATGTTTTCCAGGTGCCAATCATACTCTTCCACGTGGACCTGTGTTCTTTTGGATTTATATTTGTTATCTTTCAAAAATTCTTGAATTTATTGATACACTTTTAATCGTCCTAAGTAGTTCTAGATCAAGAAGGTTATCGTTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGTTATATTGGGCTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAATGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E367266" ref_strand="+" ref_description="SGN-E367266 [cLPT-5-F13]">
      <seq>tttggttaatcatggaaggtctttactccaacatccattactatcttgttgaacatccaacaatcagccaatttgaatggaaacaaggtcacacttttggttcttccatttcttttcttactatttccgtctctgtttacttatgtctgactctcttgtcgattcgtttatctacatttatccctaccctcactaccaccaccattcgcaactttaccgcgatacacagcctcattctttgtctcctctctctactcatggtcattgccggcatcctttctgtcttacaccaaatgccacctcatgattggaagtggatcgtatgttttcccggtgccaatcatactcttccacgtggacctgtgttcttttggatttatatttgttatctttcaaaaattcttgaatttattgatacactcttaatcgtcctaagtagttctagatcaagaaggttatcgttccttcatgtctatcaccacacacttgtgacggttcttggttatattgggcttcaatatgcacagtccatgttgggacttgctcttatagtcaacgcttcgattcatgttataatgtatgcgtattatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="57666" stop="56474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57366" g_stop="56774" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="593" r_length="593" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E367266" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57366" e_stop="56774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTTGAACATGGACGCTCTTTACTCCAACATCCATTACTATCTTGTTGAACATCCAACAATAAGCCAATTTGAATGGAAACAAGGTCACACTTTTGGTTCTTCCATTTCTTTTCTTACTATTTCCGTCTCTGTTTACTTGTGTCTGACTCTCTTGTCGATTCGTTTTTCTGCATTTATCCCTACCCTTACTACCACCACCATTCGCAACATTACCGCGATCCATAGCCTCATTCTTTGTCTCCTCTCTCTACTCATGGTCATTGCCGGCATCCTTTCTGTCTTACACCAAATGCCACCTCATGATTGGAAGTGGATCGTATGTTTTCCAGGTGCCAATCATACTCTTCCACGTGGGCCTGTGTTCTTTTGGATTTATATTTGTTATCTCTCAAAAATTCTTGAATTTATTGATACACTTTTAATCGTCCTAAGTAGTTCTAGATCAAGAAGGTTATCATTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTC</genome_strand>
        <mrna_strand>TTTGGTTAATCATGGAAGGTCTTTACTCCAACATCCATTACTATCTTGTTGAACATCCAACAATCAGCCAATTTGAATGGAAACAAGGTCACACTTTTGGTTCTTCCATTTCTTTTCTTACTATTTCCGTCTCTGTTTACTTATGTCTGACTCTCTTGTCGATTCGTTTATCTACATTTATCCCTACCCTCACTACCACCACCATTCGCAACTTTACCGCGATACACAGCCTCATTCTTTGTCTCCTCTCTCTACTCATGGTCATTGCCGGCATCCTTTCTGTCTTACACCAAATGCCACCTCATGATTGGAAGTGGATCGTATGTTTTCCCGGTGCCAATCATACTCTTCCACGTGGACCTGTGTTCTTTTGGATTTATATTTGTTATCTTTCAAAAATTCTTGAATTTATTGATACACTCTTAATCGTCCTAAGTAGTTCTAGATCAAGAAGGTTATCGTTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGTTATATTGGGCTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCGTATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577891" ref_strand="+" ref_description="SGN-E577891 [LE08BA04]">
      <seq>ttcgtttcaaaatacttcagctcttggaatctgggtactggaatcacttctctgatcttcacgacgaacctgcaggacggaccgtcatagccatgacggaccgtcacaatcttcgtaatcccacacttggtgagacttccccatcttccttcagcagcttctctacgctgccacctacggagcgtcaaaggcacgatggaccgtcataagctcagtaggtggtctcttctacattttttcgctcaaaatctctgctttcagctttggacagatttcctgcaaaataaagagaaacttataccaaaattagcacaaaaaggcttacggacacactaaacttaaggcaaaagtattaattataccgtgaaaccacggtatatcagggacatgaactcgaaggccattgttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="80860" stop="79876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80560" g_stop="80179" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E577891" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80560" e_stop="80179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTACAAAATACTTCAACTCTTGGAATCTGGGTACTAGGATCACTTCTCTGATCTTCGCGACGAACCTGCAGGACGGACCGTCATATCCATGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTTCTTCAACAACTTCTCTACGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCA-ATTTTCGCTCAAAATCTCCGCGTTCAGCTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCACAAAAAGGCTTTCGGACACACTAAACTTAAGGAAAAAGTATTAACTATACCGTGAAACCACGGTATATCAG</genome_strand>
        <mrna_strand>TTCGTTTCAAAATACTTCAGCTCTTGGAATCTGGGTACTGGAATCACTTCTCTGATCTTCACGACGAACCTGCAGGACGGACCGTCATAGCCATGACGGACCGTCACAATCTTCGTAATCCCACACTTGGTGAGACTTCCCCATCTTCCTTCAGCAGCTTCTCTACGCTGCCACCTACGGAGCGTCAAAGGCACGATGGACCGTCATAAGCTCAGTAGGTGGTCTCTTCTACATTTTTTCGCTCAAAATCTCTGCTTTCAGCTTTGGACAGATTTCCTGCAAAATAAAGAGAAACTTATACCAAAATTAGCACAAAAAGGCTTACGGACACACTAAACTTAAGGCAAAAGTATTAATTATACCGTGAAACCACGGTATATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243969" ref_strand="+" ref_description="SGN-E243969 [cLEE-1-A19]">
      <seq>ggaaatctgccaaaacgcggcttggtcgacggaccacgcgacggaccgtcgtggactctgtcgtcccatacttggtgcaatttcttctgctgctttcttcattcccctcgacggcaagtgtaacggaccgtcataggtacaacggtctgtcgagggtcttcgtttcaaaatacttcaactcttggaatctgggtactgggatcacttctctgatcttcacgacgaacctgcaggacggaccgtcatagccatgacggaccgtcacaagcttcgtaatcccacacttggtcagacttccccatcttccttcagcagcttctctacgctaccacctacggaccgtcacaagcacgacagaccttcaaaagctccgtaggtggtctcttctgcatttttttgctcaaaatctccgctttcagcttttgacagatttcctgcaaaacaaagagaaacttatatcaaaattagcacaaaaaaggctttcggacactttaaacttaaggcaaaagtattaattatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="81036" stop="79899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80736" g_stop="80199" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E243969" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.031" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80736" e_stop="80199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATCTGCCAAAACGCGGCTGGGTCGACGGACCACGCGACGGAACGTCGTGGTCATGACGGACCGTCGTGGGCTCCGTCGCCCCATACTTGGTGCAAT-TATTCTGCTGCTTTCTTCATTCCCCTCGACGGCAAGTGTGACGGACCGTCATAGGCACGACGGTCCGTCGAGGGTCTTCGTTACAAAATACTTCAACTCTTGGAATCTGGGTACTAGGATCACTTCTCTGATCTTCGCGACGAACCTGCAGGACGGACCGTCATATCCATGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTTCTTCAACAACTTCTCTACGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCA-ATTTTCGCTCAAAATCTCCGCGTTCAGCTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCAC-AAAAAGGCTTTCGGACACACTAAACTTAAGGAAAAAGTATTAACTATACC</genome_strand>
        <mrna_strand>GGAAATCTGCCAAAACGCGGCTTGGTCGACGGACCACGCGACGG-AC--C---GTC--G-TGGA-C-TC-T--G-T-CGT---CCCATACTTGGTGCAATTTCTTCTGCTGCTTTCTTCATTCCCCTCGACGGCAAGTGTAACGGACCGTCATAGGTACAACGGTCTGTCGAGGGTCTTCGTTTCAAAATACTTCAACTCTTGGAATCTGGGTACTGGGATCACTTCTCTGATCTTCACGACGAACCTGCAGGACGGACCGTCATAGCCATGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTTCTCTACGCTACCACCTACGGACCGTCACAAGCACGACAGACCTTCAAAAGCTCCGTAGGTGGTCTCTTCTGCATTTTTTTGCTCAAAATCTCCGCTTTCAGCTTTTGACAGATTTCCTGCAAAACAAAGAGAAACTTATATCAAAATTAGCACAAAAAAGGCTTTCGGACACTTTAAACTTAAGGCAAAAGTATTAATTATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E578039" ref_strand="+" ref_description="SGN-E578039 [LE08DB10]">
      <seq>cgagggtctttgttctaatacacttcaactcttggaatttgggtactgggatcacttctctgaacttcacgacgaacctgcaggacggaccgtcagatccacgacggaccgtcacaagcttcgtaatcccacacttagtcagacttccctatcttccttcagcagctgcactacgcttccacctacggaccgtcacaagcacgacggaccgtcataagctccgtaggtggtttcttctgcatttcttcgctcaaaatctccgcattcagctttggacagatttcctgcaaaacaaagagtaacttatataaaaattagcacaaaaaggcttttggacacactaagcttaaggaaaaagtattaataataccgtgaaaccacggtatatcaacaccctcaacttaaattagttgtttgtcctcaagcgacgcactatgactcactacacaatctttgtacaatagtatccatgttttatcctttgcaatcatttggctatcaatcccgattaatctcatcaaatctatgcatgctatcactattaggtttgaattttgtgggatcagaatatgacacagacttaccatgcactaacacctatcctcttcaatttctcaccgaggtgctaacaattctagtattgcaactagtgtcctcactataagacaaaatcctcctttttcacacagtgattttagtttgagtataaggattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07SLe0099J13-mf7Bt/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07SLe0099J13.1" temp_strand="-" temp_description="C07SLe0099J13.1  AC210368.1 htgs_phase:3 submitted_to_sgn_as:C07SLe0099J13 upload_account_name:france">
        <position start="90676" stop="89363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90376" g_stop="89663" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07SLe0099J13.1" gen_strand="-" ref_id="SGN-E578039" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07SLe0099J13.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90376" e_stop="89663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGGTCTTCGTTACAAAATACTTCAACTCTTGGAATCTGGGTACTGGGATCACTTCTCTGATCTTCGCGACGGACCTGCAGGACGGACCGTCATATCCATGACAGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCATCTTCTCTACGCTGCCACCTACGGACCTTCACAAGCACGACGGACTGTCATAAGCTCCGTAGGTGGTCTCTTCTGCAATT-TTTGCTCAAAATCTCCACGTTCAGCTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCACAAAAAGGCTTTCGGACACACTAAACTTAAGGAAAAAGTATTAACTATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTATACAATAGTATTCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGACTAATCCCATCAAATCTATGCATGCTATCACTATTAGGCTCGACTTTTGTGGGTTC-GAACATGACACAGACTCACCATGCACTAACACCTATCCTCTTCAATTTCTCACCGAGGTACTAACAATTCCGGTATTGCAACTAGTGTCCTCACTTTAGAACAAAATCCTCATTTTTCACACAATGATTTCAGTTTGAGTATAAAGATTAC</genome_strand>
        <mrna_strand>CGAGGGTCTTTGTTCTAATACACTTCAACTCTTGGAATTTGGGTACTGGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGACGGACCGTCAGATCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTAGTCAGACTTCCCTATCTTCCTTCAGCAGCTGCACTACGCTTCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTTTCTTCTGCATTTCTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGTAACTTATATAAAAATTAGCACAAAAAGGCTTTTGGACACACTAAGCTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTAGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCACTATTAGGTTTGAATTTTGTGGGATCAGAATATGACACAGACTTACCATGCACTAACACCTATCCTCTTCAATTTCTCACCGAGGTGCTAACAATTCTAGTATTGCAACTAGTGTCCTCACTATAAGACAAAATCCTCCTTTTTCACACAGTGATTTTAGTTTGAGTATAAGGATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>25</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="10323" PGL_stop="5199"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10323" e_stop="9682"/>
            <exon e_start="6143" e_stop="6069"/>
            <exon e_start="5687" e_stop="5199"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="0.998"/>
          <exon-intron don_prob="0.975" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="10323" e_stop="9682" e_length="642"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="9681" i_stop="6144" i_length="3538"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="6143" e_stop="6069" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.988">
            <gDNA_intron_boundary i_start="6068" i_stop="5688" i_length="381"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="5687" e_stop="5199" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10323" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5559"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10311" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699542" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10311" stop="9682"/>
              <exon start="6143" stop="6071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10254" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E601335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10254" stop="9682"/>
              <exon start="6143" stop="6089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600428" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10248" stop="9870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10242" stop="9682"/>
              <exon start="6143" stop="6070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10238" stop="9682"/>
              <exon start="6143" stop="6081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9981" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9968" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270273" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9964" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9964" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9962" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9888" stop="9682"/>
              <exon start="6143" stop="6069"/>
              <exon start="5687" stop="5256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATAGTGCATAACACACTCTTCTTTTACAATACGCATTTCCTCTAGCACCAGTTACCCCACCCACTCACCCACCCCCCACTCAACCCCGCCTTGTCCTCCATCTCCGATCATCTCTGCAAATCTGAGAGCTACCGGAAAAAATGTCACATGGAGACACTATACCTCTTCACTCCTCATCTCAATCTGACATTGATGAAATTGAAAACCTCATCTATTCCAATCCTTCTACTGTCCTTCCAGCACGCCCTCCTTCTCCTCCTCGTGCTGCCATTCCTGTTTCATCTTCTCCTTTCATGCCTTCCAATCTACGCCCACCACCTCCCCCTACATCTACCACAACCAACAATTACAAACCGACACCTGTTCCTGCCATTCCATCTCCACCACCCCTACCTTCATCTGGACAGTCAAATATAGCTGCTACCGGATTCGGATCGCCTCCCAATACCCTTACCGAACCCGTTTGGGATACCGTCAAAAGAGATCTGTCCAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAAGCTCTTCGTGATTGGGATCTATGGGGACCTTTCTTCTTCATTGTTTTCCTTGGTCTCACTTTGTCATGGTCTGCTTCTGTTAAGAAG : TCTGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATTCTGACACTGAATGTATTGTTACTG : GGCGGTCATATAATCTTCTTCCAAAGTCTCAGTCTGCTGGGTTACTGTCTATTCCCGCTTGATGTTGGTGCTTTCATTTGCATGCTAAAGGACAACGTGATATTGAAGGTAGTTGTAGTATGTGTTGCACTAGCTTGGAGCTCTTGGGCGGCATACCCCTTCATGAGTACAGCTGTTAACCCTAGAAGGAAAGCTCTTGCCCTGTATCCTGTAGTACTCATGTATGTATCTGTTGGATTTCTCATTATTGCCATTGATTGATTTTAGTTGTGCCTACTGCCTACTATATGAGTGAAAGATGTATGAAGCCGATACACAACATTGAAGTAGGGATATAACATGTTGGAGATTTTTTATTACCTCATGAAAATTTGTTGATAATTCTAGTTCCACTCTGATATCTCACATTTTGTACTGCTGTAAGAAGATGTTATATACATCTAGTTCTGTCTGATGTATGTTATGCCTCAATAAGGAGACGTATTCTCT</gDNA_template>
            <first_frame> H  S  A  *  H  T  L  L  L  Q  Y  A  F  P  L  A  P  V  T  P  P  T  H  P  P  P  T  Q  P  R  L  V  L  H  L  R  S  S  L  Q  I  *  E  L  P  E  K  M  S  H  G  D  T  I  P  L  H  S  S  S  Q  S  D  I  D  E  I  E  N  L  I  Y  S  N  P  S  T  V  L  P  A  R  P  P  S  P  P  R  A  A  I  P  V  S  S  S  P  F  M  P  S  N  L  R  P  P  P  P  P  T  S  T  T  T  N  N  Y  K  P  T  P  V  P  A  I  P  S  P  P  P  L  P  S  S  G  Q  S  N  I  A  A  T  G  F  G  S  P  P  N  T  L  T  E  P  V  W  D  T  V  K  R  D  L  S  R  I  V  S  N  L  K  L  V  V  F  P  N  P  Y  R  E  D  P  G  K  A  L  R  D  W  D  L  W  G  P  F  F  F  I  V  F  L  G  L  T  L  S  W  S  A  S  V  K  K  :  S  E  V  F  A  V  A  F  A  L  L  A  A  G  A  V  I  L  T  L  N  V  L  L  L  :  G  G  H  I  I  F  F  Q  S  L  S  L  L  G  Y  C  L  F  P  L  D  V  G  A  F  I  C  M  L  K  D  N  V  I  L  K  V  V  V  V  C  V  A  L  A  W  S  S  W  A  A  Y  P  F  M  S  T  A  V  N  P  R  R  K  A  L  A  L  Y  P  V  V  L  M  Y  V  S  V  G  F  L  I  I  A  I  D  *  F  *  L  C  L  L  P  T  I  *  V  K  D  V  *  S  R  Y  T  T  L  K  *  G  Y  N  M  L  E  I  F  Y  Y  L  M  K  I  C  *  *  F  *  F  H  S  D  I  S  H  F  V  L  L  *  E  D  V  I  Y  I  *  F  C  L  M  Y  V  M  P  Q  *  G  D  V  F  S </first_frame>
            <second_frame>  I  V  H  N  T  L  F  F  Y  N  T  H  F  L  *  H  Q  L  P  H  P  L  T  H  P  P  L  N  P  A  L  S  S  I  S  D  H  L  C  K  S  E  S  Y  R  K  K  C  H  M  E  T  L  Y  L  F  T  P  H  L  N  L  T  L  M  K  L  K  T  S  S  I  P  I  L  L  L  S  F  Q  H  A  L  L  L  L  L  V  L  P  F  L  F  H  L  L  L  S  C  L  P  I  Y  A  H  H  L  P  L  H  L  P  Q  P  T  I  T  N  R  H  L  F  L  P  F  H  L  H  H  P  Y  L  H  L  D  S  Q  I  *  L  L  P  D  S  D  R  L  P  I  P  L  P  N  P  F  G  I  P  S  K  E  I  C  P  E  L  L  V  I  *  S  W  W  F  S  L  I  L  I  E  K  I  L  A  K  L  F  V  I  G  I  Y  G  D  L  S  S  S  L  F  S  L  V  S  L  C  H  G  L  L  L  L  R  S :   L  R  F  L  L  L  H  L  L  C  W  L  P  V  L  S  F  *  H  *  M  Y  C  Y  W :   A  V  I  *  S  S  S  K  V  S  V  C  W  V  T  V  Y  S  R  L  M  L  V  L  S  F  A  C  *  R  T  T  *  Y  *  R  *  L  *  Y  V  L  H  *  L  G  A  L  G  R  H  T  P  S  *  V  Q  L  L  T  L  E  G  K  L  L  P  C  I  L  *  Y  S  C  M  Y  L  L  D  F  S  L  L  P  L  I  D  F  S  C  A  Y  C  L  L  Y  E  *  K  M  Y  E  A  D  T  Q  H  *  S  R  D  I  T  C  W  R  F  F  I  T  S  *  K  F  V  D  N  S  S  S  T  L  I  S  H  I  L  Y  C  C  K  K  M  L  Y  T  S  S  S  V  *  C  M  L  C  L  N  K  E  T  Y  S   </second_frame>
            <third_frame>   *  C  I  T  H  S  S  F  T  I  R  I  S  S  S  T  S  Y  P  T  H  S  P  T  P  H  S  T  P  P  C  P  P  S  P  I  I  S  A  N  L  R  A  T  G  K  N  V  T  W  R  H  Y  T  S  S  L  L  I  S  I  *  H  *  *  N  *  K  P  H  L  F  Q  S  F  Y  C  P  S  S  T  P  S  F  S  S  S  C  C  H  S  C  F  I  F  S  F  H  A  F  Q  S  T  P  T  T  S  P  Y  I  Y  H  N  Q  Q  L  Q  T  D  T  C  S  C  H  S  I  S  T  T  P  T  F  I  W  T  V  K  Y  S  C  Y  R  I  R  I  A  S  Q  Y  P  Y  R  T  R  L  G  Y  R  Q  K  R  S  V  Q  N  C  *  *  F  E  A  G  G  F  P  *  S  L  *  R  R  S  W  Q  S  S  S  *  L  G  S  M  G  T  F  L  L  H  C  F  P  W  S  H  F  V  M  V  C  F  C  *  E   : V  *  G  F  C  C  C  I  C  S  A  G  C  R  C  C  H  S  D  T  E  C  I  V  T   : G  R  S  Y  N  L  L  P  K  S  Q  S  A  G  L  L  S  I  P  A  *  C  W  C  F  H  L  H  A  K  G  Q  R  D  I  E  G  S  C  S  M  C  C  T  S  L  E  L  L  G  G  I  P  L  H  E  Y  S  C  *  P  *  K  E  S  S  C  P  V  S  C  S  T  H  V  C  I  C  W  I  S  H  Y  C  H  *  L  I  L  V  V  P  T  A  Y  Y  M  S  E  R  C  M  K  P  I  H  N  I  E  V  G  I  *  H  V  G  D  F  L  L  P  H  E  N  L  L  I  I  L  V  P  L  *  Y  L  T  F  C  T  A  V  R  R  C  Y  I  H  L  V  L  S  D  V  C  Y  A  S  I  R  R  R  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10197" stop="9682"/>
                    <exon start="6143" stop="6069"/>
                    <exon start="5687" stop="5427"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELPEKMSHGDTIPLHSSSQSDIDEIENLIYSNPSTVLPARPPSPPRAAIPVSSSPFMPSNLRPPPPPTSTTTNNYKPTPVPAIPSPPPLPSSGQSNIAATGFGSPPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSWSASVKKSEVFAVAFALLAAGAVILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGAFICMLKDNVILKVVVVCVALAWSSWAAYPFMSTAVNPRRKALALYPVVLMYVSVGFLIIAID*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="18613" PGL_stop="25657"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18613" e_stop="18899"/>
            <exon e_start="25063" e_stop="25137"/>
            <exon e_start="25487" e_stop="25657"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.972" e_score="0.922"/>
          <exon-intron don_prob="0.857" acc_prob="0.477" e_score="0.920"/>
          <exon-only e_score="0.877"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="18613" e_stop="18899" e_length="287"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.972">
            <gDNA_intron_boundary i_start="18900" i_stop="25062" i_length="6163"/>
          </intron>
          <exon e_serial="2" e_score="0.920">
            <gDNA_exon_boundary e_start="25063" e_stop="25137" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.857" acc_prob="0.477">
            <gDNA_intron_boundary i_start="25138" i_stop="25486" i_length="349"/>
          </intron>
          <exon e_serial="3" e_score="0.877">
            <gDNA_exon_boundary e_start="25487" e_stop="25657" e_length="171"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18613" stop="18899"/>
              <exon start="25063" stop="25137"/>
              <exon start="25487" stop="25650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270273" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18619" stop="18899"/>
              <exon start="25063" stop="25137"/>
              <exon start="25487" stop="25657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291603" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATACCTGTTCCCGCCATTTCATCTCCACAACCCCTACCTTCATCGGTACAGTCGAATATAGCTGCTACTGGATTTGGATCGCCTCCCAATACCCTTATAGAACCCGTTTGGGATACCGTCAAAAGAGATCTGCCTAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAGGCTCTTCGTGATTAAGATCTATGAGGACCTTTCTTCTACATTGTTTTCATTGGTGTCACTTTGTCATGGTCTACTTTTGTTAAAAAG : TCCGAGGTTTTTGCTGTTGCATTTGCTCTGCTGGCTGCCGGTGCTGTCATCGTGACATTGAATATCTTGTTACTG : GGCGGTCACATAATCTTCTTTCAAAGCCTCATTCTTTTAGGTAACTATCTATTCCCACTTGATGTTGGCGCCTTTATTTGCATGCTAAAGGACAATGTAATATTGAAGGTGGTTGTAGTTTGTGTTGCACTAGCTTGGAGTTCTTGGGCAGCATACCCCTTCATAAGTACA</gDNA_template>
            <first_frame> L  Y  L  F  P  P  F  H  L  H  N  P  Y  L  H  R  Y  S  R  I  *  L  L  L  D  L  D  R  L  P  I  P  L  *  N  P  F  G  I  P  S  K  E  I  C  L  E  L  L  V  I  *  S  W  W  F  S  L  I  L  I  E  K  I  L  A  R  L  F  V  I  K  I  Y  E  D  L  S  S  T  L  F  S  L  V  S  L  C  H  G  L  L  L  L  K  S :   P  R  F  L  L  L  H  L  L  C  W  L  P  V  L  S  S  *  H  *  I  S  C  Y  W :   A  V  T  *  S  S  F  K  A  S  F  F  *  V  T  I  Y  S  H  L  M  L  A  P  L  F  A  C  *  R  T  M  *  Y  *  R  W  L  *  F  V  L  H  *  L  G  V  L  G  Q  H  T  P  S  *  V   </first_frame>
            <second_frame>  Y  T  C  S  R  H  F  I  S  T  T  P  T  F  I  G  T  V  E  Y  S  C  Y  W  I  W  I  A  S  Q  Y  P  Y  R  T  R  L  G  Y  R  Q  K  R  S  A  *  N  C  *  *  F  E  A  G  G  F  P  *  S  L  *  R  R  S  W  Q  G  S  S  *  L  R  S  M  R  T  F  L  L  H  C  F  H  W  C  H  F  V  M  V  Y  F  C  *  K   : V  R  G  F  C  C  C  I  C  S  A  G  C  R  C  C  H  R  D  I  E  Y  L  V  T   : G  R  S  H  N  L  L  S  K  P  H  S  F  R  *  L  S  I  P  T  *  C  W  R  L  Y  L  H  A  K  G  Q  C  N  I  E  G  G  C  S  L  C  C  T  S  L  E  F  L  G  S  I  P  L  H  K  Y  </second_frame>
            <third_frame>   I  P  V  P  A  I  S  S  P  Q  P  L  P  S  S  V  Q  S  N  I  A  A  T  G  F  G  S  P  P  N  T  L  I  E  P  V  W  D  T  V  K  R  D  L  P  R  I  V  S  N  L  K  L  V  V  F  P  N  P  Y  R  E  D  P  G  K  A  L  R  D  *  D  L  *  G  P  F  F  Y  I  V  F  I  G  V  T  L  S  W  S  T  F  V  K  K  :  S  E  V  F  A  V  A  F  A  L  L  A  A  G  A  V  I  V  T  L  N  I  L  L  L  :  G  G  H  I  I  F  F  Q  S  L  I  L  L  G  N  Y  L  F  P  L  D  V  G  A  F  I  C  M  L  K  D  N  V  I  L  K  V  V  V  V  C  V  A  L  A  W  S  S  W  A  A  Y  P  F  I  S  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18837" stop="18899"/>
                    <exon start="25063" stop="25137"/>
                    <exon start="25487" stop="25657"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPFFYIVFIGVTLSWSTFVKKSEVFAVAFALLAAGAVIVTLNILLLGGHIIFFQSLILLGNYLFPLDVGAFICMLKDNVILKVVVVCVALAWSSWAAYPFIST</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18615" stop="18827"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPVPAISSPQPLPSSVQSNIAATGFGSPPNTLIEPVWDTVKRDLPRIVSNLKLVVFPNPYREDPGKALRD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="18622" e_stop="18899"/>
            <exon e_start="24598" e_stop="24869"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.397" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18622" e_stop="18899" e_length="278"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.397">
            <gDNA_intron_boundary i_start="18900" i_stop="24597" i_length="5698"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24598" e_stop="24869" e_length="272"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18622" stop="18899"/>
              <exon start="24598" stop="24869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578429" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCCCGCCATTTCATCTCCACAACCCCTACCTTCATCGGTACAGTCGAATATAGCTGCTACTGGATTTGGATCGCCTCCCAATACCCTTATAGAACCCGTTTGGGATACCGTCAAAAGAGATCTGCCTAGAATTGTTAGTAATTTGAAGCTGGTGGTTTTCCCTAATCCTTATAGAGAAGATCCTGGCAAGGCTCTTCGTGATTAAGATCTATGAGGACCTTTCTTCTACATTGTTTTCATTGGTGTCACTTTGTCATGGTCTACTTTTGTTAAAAAG : TTATCTCTTATTCAACATGTTGTGAGGAGTTACCTTCCAAGTTTGTGAACAATCAGCAATGTTTCTGTGGACCCATTAACAAACCATCAAGAGATTATCGAATGTCAAGTGGAAATGTTGTTTGTCTAGACAGTTATTTTCAGACAATTTGATGTAATGAATAATTCTAGATCAGCTTTTGGACTGTTGAAACTTAGGTCCGGCCGGATCTTGCTCGATTATGGCATGTTGTCTTGTTACTGTAACGAAGTCCACAGGCAGACATTATTTTA</gDNA_template>
            <first_frame> F  P  P  F  H  L  H  N  P  Y  L  H  R  Y  S  R  I  *  L  L  L  D  L  D  R  L  P  I  P  L  *  N  P  F  G  I  P  S  K  E  I  C  L  E  L  L  V  I  *  S  W  W  F  S  L  I  L  I  E  K  I  L  A  R  L  F  V  I  K  I  Y  E  D  L  S  S  T  L  F  S  L  V  S  L  C  H  G  L  L  L  L  K  S :   Y  L  L  F  N  M  L  *  G  V  T  F  Q  V  C  E  Q  S  A  M  F  L  W  T  H  *  Q  T  I  K  R  L  S  N  V  K  W  K  C  C  L  S  R  Q  L  F  S  D  N  L  M  *  *  I  I  L  D  Q  L  L  D  C  *  N  L  G  P  A  G  S  C  S  I  M  A  C  C  L  V  T  V  T  K  S  T  G  R  H  Y  F  </first_frame>
            <second_frame>  S  R  H  F  I  S  T  T  P  T  F  I  G  T  V  E  Y  S  C  Y  W  I  W  I  A  S  Q  Y  P  Y  R  T  R  L  G  Y  R  Q  K  R  S  A  *  N  C  *  *  F  E  A  G  G  F  P  *  S  L  *  R  R  S  W  Q  G  S  S  *  L  R  S  M  R  T  F  L  L  H  C  F  H  W  C  H  F  V  M  V  Y  F  C  *  K   : V  I  S  Y  S  T  C  C  E  E  L  P  S  K  F  V  N  N  Q  Q  C  F  C  G  P  I  N  K  P  S  R  D  Y  R  M  S  S  G  N  V  V  C  L  D  S  Y  F  Q  T  I  *  C  N  E  *  F  *  I  S  F  W  T  V  E  T  *  V  R  P  D  L  A  R  L  W  H  V  V  L  L  L  *  R  S  P  Q  A  D  I  I  L </second_frame>
            <third_frame>   P  A  I  S  S  P  Q  P  L  P  S  S  V  Q  S  N  I  A  A  T  G  F  G  S  P  P  N  T  L  I  E  P  V  W  D  T  V  K  R  D  L  P  R  I  V  S  N  L  K  L  V  V  F  P  N  P  Y  R  E  D  P  G  K  A  L  R  D  *  D  L  *  G  P  F  F  Y  I  V  F  I  G  V  T  L  S  W  S  T  F  V  K  K  :  L  S  L  I  Q  H  V  V  R  S  Y  L  P  S  L  *  T  I  S  N  V  S  V  D  P  L  T  N  H  Q  E  I  I  E  C  Q  V  E  M  L  F  V  *  T  V  I  F  R  Q  F  D  V  M  N  N  S  R  S  A  F  G  L  L  K  L  R  S  G  R  I  L  L  D  Y  G  M  L  S  C  Y  C  N  E  V  H  R  Q  T  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18624" stop="18827"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PAISSPQPLPSSVQSNIAATGFGSPPNTLIEPVWDTVKRDLPRIVSNLKLVVFPNPYREDPGKALRD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="56037" PGL_stop="56978"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56037" e_stop="56043"/>
            <exon e_start="56311" e_stop="56978"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.857"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.857">
            <gDNA_exon_boundary e_start="56037" e_stop="56043" e_length="7"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="56044" i_stop="56310" i_length="267"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="56311" e_stop="56978" e_length="668"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56037" stop="56043"/>
              <exon start="56311" stop="56978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549386" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTAT : TCTAACATCAAATGGAAAATCAAATAAAATTTTTAAAAACTACAAAGTAGATAAGCAATAGAGATAAGCAATGGATACAAAGGAGATGCTCGCCTTTGTTTGGAATGAAGATGAATGAACACACACTTGAGTCTGGAATTGATAAAATTAGGAGAAAACATGATAGCAGTCACTATACTTGGGCACATGCGAGACATGACCGCCACTTTAACTTAATCATAAATTAGAGCTCTTTCTTGACGTTGTTGTTATAATTCTTGGAATGAAAATCAAGAAAGAGCACTAATAATGATGCATTAAAAACAATACCAAAACACCATGCTCCAACTCCAGTGCATCCAAACTCAGTTGTAAAGTGATAATACAACATCAAAGCCGATATTATAAACCCTAGCATAAATTGATATATTTGACAATTTGTCACCACTTTTTTCCACCATGGCCTTTTTCCTATCGCGGATAGGAAATAATATGCATACATTATAACATGAATCGAAGCGTTGACTATAAGAGCAAGTCCCAACATGGACTGTGCATATTGAAGTCCAATATAGCCAAGAACCGTCACAAGTGTGTGGTGATAGACATGAAGGAATGATAACCTTCTTGATCTAGAACTACTTAGGACGATTAAAAGTGTATCAATAAATTCAAGAATTTTTGAGAGA</gDNA_template>
            <first_frame> F  L   : F  *  H  Q  M  E  N  Q  I  K  F  L  K  T  T  K  *  I  S  N  R  D  K  Q  W  I  Q  R  R  C  S  P  L  F  G  M  K  M  N  E  H  T  L  E  S  G  I  D  K  I  R  R  K  H  D  S  S  H  Y  T  W  A  H  A  R  H  D  R  H  F  N  L  I  I  N  *  S  S  F  L  T  L  L  L  *  F  L  E  *  K  S  R  K  S  T  N  N  D  A  L  K  T  I  P  K  H  H  A  P  T  P  V  H  P  N  S  V  V  K  *  *  Y  N  I  K  A  D  I  I  N  P  S  I  N  *  Y  I  *  Q  F  V  T  T  F  F  H  H  G  L  F  P  I  A  D  R  K  *  Y  A  Y  I  I  T  *  I  E  A  L  T  I  R  A  S  P  N  M  D  C  A  Y  *  S  P  I  *  P  R  T  V  T  S  V  W  *  *  T  *  R  N  D  N  L  L  D  L  E  L  L  R  T  I  K  S  V  S  I  N  S  R  I  F  E  R </first_frame>
            <second_frame>  F  Y  :  S  N  I  K  W  K  I  K  *  N  F  *  K  L  Q  S  R  *  A  I  E  I  S  N  G  Y  K  G  D  A  R  L  C  L  E  *  R  *  M  N  T  H  L  S  L  E  L  I  K  L  G  E  N  M  I  A  V  T  I  L  G  H  M  R  D  M  T  A  T  L  T  *  S  *  I  R  A  L  S  *  R  C  C  Y  N  S  W  N  E  N  Q  E  R  A  L  I  M  M  H  *  K  Q  Y  Q  N  T  M  L  Q  L  Q  C  I  Q  T  Q  L  *  S  D  N  T  T  S  K  P  I  L  *  T  L  A  *  I  D  I  F  D  N  L  S  P  L  F  S  T  M  A  F  F  L  S  R  I  G  N  N  M  H  T  L  *  H  E  S  K  R  *  L  *  E  Q  V  P  T  W  T  V  H  I  E  V  Q  Y  S  Q  E  P  S  Q  V  C  G  D  R  H  E  G  M  I  T  F  L  I  *  N  Y  L  G  R  L  K  V  Y  Q  *  I  Q  E  F  L  R   </second_frame>
            <third_frame>   F  I :   L  T  S  N  G  K  S  N  K  I  F  K  N  Y  K  V  D  K  Q  *  R  *  A  M  D  T  K  E  M  L  A  F  V  W  N  E  D  E  *  T  H  T  *  V  W  N  *  *  N  *  E  K  T  *  *  Q  S  L  Y  L  G  T  C  E  T  *  P  P  L  *  L  N  H  K  L  E  L  F  L  D  V  V  V  I  I  L  G  M  K  I  K  K  E  H  *  *  *  C  I  K  N  N  T  K  T  P  C  S  N  S  S  A  S  K  L  S  C  K  V  I  I  Q  H  Q  S  R  Y  Y  K  P  *  H  K  L  I  Y  L  T  I  C  H  H  F  F  P  P  W  P  F  S  Y  R  G  *  E  I  I  C  I  H  Y  N  M  N  R  S  V  D  Y  K  S  K  S  Q  H  G  L  C  I  L  K  S  N  I  A  K  N  R  H  K  C  V  V  I  D  M  K  E  *  *  P  S  *  S  R  T  T  *  D  D  *  K  C  I  N  K  F  K  N  F  *  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07SLe0099J13.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="57366" PGL_stop="56296"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57366" e_stop="56296"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="57366" e_stop="56296" e_length="1071"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57366" stop="56774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57319" stop="56667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57020" stop="56302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56877" stop="56296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265434" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGGTTGAACATGGACGCTCTTTACTCCAACATCCATTACTATCTTGTTGAACATCCAACAATAAGCCAATTTGAATGGAAACAAGGTCACACTTTTGGTTCTTCCATTTCTTTTCTTACTATTTCCGTCTCTGTTTACTTGTGTCTGACTCTCTTGTCGATTCGTTTTTCTGCATTTATCCCTACCCTTACTACCACCACCATTCGCAACATTACCGCGATCCATAGCCTCATTCTTTGTCTCCTCTCTCTACTCATGGTCATTGCCGGCATCCTTTCTGTCTTACACCAAATGCCACCTCATGATTGGAAGTGGATCGTATGTTTTCCAGGTGCCAATCATACTCTTCCACGTGGGCCTGTGTTCTTTTGGATTTATATTTGTTATCTCTCAAAAATTCTTGAATTTATTGATACACTTTTAATCGTCCTAAGTAGTTCTAGATCAAGAAGGTTATCATTCCTTCATGTCTATCACCACACACTTGTGACGGTTCTTGGCTATATTGGACTTCAATATGCACAGTCCATGTTGGGACTTGCTCTTATAGTCAACGCTTCGATTCATGTTATAATGTATGCATATTATTTCCTATCCGCGATAGGAAAAAGGCCATGGTGGAAAAAAGTGGTGACAAATTGTCAAATATATCAATTTATGCTAGGGTTTATAATATCGGCTTTGATGTTGTATTATCACTTTACAACTGAGTTTGGATGCACTGGAGTTGGAGCATGGTGTTTTGGTATTGTTTTTAATGCATCATTATTAGTGCTCTTTCTTGATTTTCATTCCAAGAATTATAACAACAACGTCAAGAAAGAGCTCTAATTTATGATTAAGTTAAAGTGGCGGTCATGTCTCGCATGTGCCCAAGTATAGTGACTGCTATCATGTTTTCTCCTAATTTTATCAATTCCAGACTCAAGTGTGTGTTCATTCATCTTCATTCCAAACAAAGGCGAGCATCTCCTTTGTATCCATTGCTTATCTCTATTGCTTATCTACTTTGTAGTTTTTAAAAATTTTATTTGATTTTCCATTTGATGTTAGATGCTCTTATTATTGA</gDNA_template>
            <first_frame> F  G  *  T  W  T  L  F  T  P  T  S  I  T  I  L  L  N  I  Q  Q  *  A  N  L  N  G  N  K  V  T  L  L  V  L  P  F  L  F  L  L  F  P  S  L  F  T  C  V  *  L  S  C  R  F  V  F  L  H  L  S  L  P  L  L  P  P  P  F  A  T  L  P  R  S  I  A  S  F  F  V  S  S  L  Y  S  W  S  L  P  A  S  F  L  S  Y  T  K  C  H  L  M  I  G  S  G  S  Y  V  F  Q  V  P  I  I  L  F  H  V  G  L  C  S  F  G  F  I  F  V  I  S  Q  K  F  L  N  L  L  I  H  F  *  S  S  *  V  V  L  D  Q  E  G  Y  H  S  F  M  S  I  T  T  H  L  *  R  F  L  A  I  L  D  F  N  M  H  S  P  C  W  D  L  L  L  *  S  T  L  R  F  M  L  *  C  M  H  I  I  S  Y  P  R  *  E  K  G  H  G  G  K  K  W  *  Q  I  V  K  Y  I  N  L  C  *  G  L  *  Y  R  L  *  C  C  I  I  T  L  Q  L  S  L  D  A  L  E  L  E  H  G  V  L  V  L  F  L  M  H  H  Y  *  C  S  F  L  I  F  I  P  R  I  I  T  T  T  S  R  K  S  S  N  L  *  L  S  *  S  G  G  H  V  S  H  V  P  K  Y  S  D  C  Y  H  V  F  S  *  F  Y  Q  F  Q  T  Q  V  C  V  H  S  S  S  F  Q  T  K  A  S  I  S  F  V  S  I  A  Y  L  Y  C  L  S  T  L  *  F  L  K  I  L  F  D  F  P  F  D  V  R  C  S  Y  Y  * </first_frame>
            <second_frame>  L  V  E  H  G  R  S  L  L  Q  H  P  L  L  S  C  *  T  S  N  N  K  P  I  *  M  E  T  R  S  H  F  W  F  F  H  F  F  S  Y  Y  F  R  L  C  L  L  V  S  D  S  L  V  D  S  F  F  C  I  Y  P  Y  P  Y  Y  H  H  H  S  Q  H  Y  R  D  P  *  P  H  S  L  S  P  L  S  T  H  G  H  C  R  H  P  F  C  L  T  P  N  A  T  S  *  L  E  V  D  R  M  F  S  R  C  Q  S  Y  S  S  T  W  A  C  V  L  L  D  L  Y  L  L  S  L  K  N  S  *  I  Y  *  Y  T  F  N  R  P  K  *  F  *  I  K  K  V  I  I  P  S  C  L  S  P  H  T  C  D  G  S  W  L  Y  W  T  S  I  C  T  V  H  V  G  T  C  S  Y  S  Q  R  F  D  S  C  Y  N  V  C  I  L  F  P  I  R  D  R  K  K  A  M  V  E  K  S  G  D  K  L  S  N  I  S  I  Y  A  R  V  Y  N  I  G  F  D  V  V  L  S  L  Y  N  *  V  W  M  H  W  S  W  S  M  V  F  W  Y  C  F  *  C  I  I  I  S  A  L  S  *  F  S  F  Q  E  L  *  Q  Q  R  Q  E  R  A  L  I  Y  D  *  V  K  V  A  V  M  S  R  M  C  P  S  I  V  T  A  I  M  F  S  P  N  F  I  N  S  R  L  K  C  V  F  I  H  L  H  S  K  Q  R  R  A  S  P  L  Y  P  L  L  I  S  I  A  Y  L  L  C  S  F  *  K  F  Y  L  I  F  H  L  M  L  D  A  L  I  I   </second_frame>
            <third_frame>   W  L  N  M  D  A  L  Y  S  N  I  H  Y  Y  L  V  E  H  P  T  I  S  Q  F  E  W  K  Q  G  H  T  F  G  S  S  I  S  F  L  T  I  S  V  S  V  Y  L  C  L  T  L  L  S  I  R  F  S  A  F  I  P  T  L  T  T  T  T  I  R  N  I  T  A  I  H  S  L  I  L  C  L  L  S  L  L  M  V  I  A  G  I  L  S  V  L  H  Q  M  P  P  H  D  W  K  W  I  V  C  F  P  G  A  N  H  T  L  P  R  G  P  V  F  F  W  I  Y  I  C  Y  L  S  K  I  L  E  F  I  D  T  L  L  I  V  L  S  S  S  R  S  R  R  L  S  F  L  H  V  Y  H  H  T  L  V  T  V  L  G  Y  I  G  L  Q  Y  A  Q  S  M  L  G  L  A  L  I  V  N  A  S  I  H  V  I  M  Y  A  Y  Y  F  L  S  A  I  G  K  R  P  W  W  K  K  V  V  T  N  C  Q  I  Y  Q  F  M  L  G  F  I  I  S  A  L  M  L  Y  Y  H  F  T  T  E  F  G  C  T  G  V  G  A  W  C  F  G  I  V  F  N  A  S  L  L  V  L  F  L  D  F  H  S  K  N  Y  N  N  N  V  K  K  E  L  *  F  M  I  K  L  K  W  R  S  C  L  A  C  A  Q  V  *  *  L  L  S  C  F  L  L  I  L  S  I  P  D  S  S  V  C  S  F  I  F  I  P  N  K  G  E  H  L  L  C  I  H  C  L  S  L  L  L  I  Y  F  V  V  F  K  N  F  I  *  F  S  I  *  C  *  M  L  L  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57364" stop="56534"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>828</number_coding_nucleotides>
                  <number_encoded_amino_acids>276</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLNMDALYSNIHYYLVEHPTISQFEWKQGHTFGSSISFLTISVSVYLCLTLLSIRFSAFIPTLTTTTIRNITAIHSLILCLLSLLMVIAGILSVLHQMPPHDWKWIVCFPGANHTLPRGPVFFWIYICYLSKILEFIDTLLIVLSSSRSRRLSFLHVYHHTLVTVLGYIGLQYAQSMLGLALIVNASIHVIMYAYYFLSAIGKRPWWKKVVTNCQIYQFMLGFIISALMLYYHFTTEFGCTGVGAWCFGIVFNASLLVLFLDFHSKNYNNNVKKEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="80736" PGL_stop="80179"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80736" e_stop="80179"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="80736" e_stop="80179" e_length="558"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80736" stop="80199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80560" stop="80179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577891" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAATCTGCCAAAACGCGGCTGGGTCGACGGACCACGCGACGGAACGTCGTGGTCATGACGGACCGTCGTGGGCTCCGTCGCCCCATACTTGGTGCAATTATTCTGCTGCTTTCTTCATTCCCCTCGACGGCAAGTGTGACGGACCGTCATAGGCACGACGGTCCGTCGAGGGTCTTCGTTACAAAATACTTCAACTCTTGGAATCTGGGTACTAGGATCACTTCTCTGATCTTCGCGACGAACCTGCAGGACGGACCGTCATATCCATGACGGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTTCTTCAACAACTTCTCTACGCTGCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCAATTTTCGCTCAAAATCTCCGCGTTCAGCTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCACAAAAAGGCTTTCGGACACACTAAACTTAAGGAAAAAGTATTAACTATACCGTGAAACCACGGTATATCAG</gDNA_template>
            <first_frame> G  N  L  P  K  R  G  W  V  D  G  P  R  D  G  T  S  W  S  *  R  T  V  V  G  S  V  A  P  Y  L  V  Q  L  F  C  C  F  L  H  S  P  R  R  Q  V  *  R  T  V  I  G  T  T  V  R  R  G  S  S  L  Q  N  T  S  T  L  G  I  W  V  L  G  S  L  L  *  S  S  R  R  T  C  R  T  D  R  H  I  H  D  G  P  S  Q  A  S  *  S  H  T  W  S  D  F  P  I  F  L  Q  Q  L  L  Y  A  A  T  Y  G  P  S  Q  A  R  R  T  V  I  S  S  V  G  G  L  F  C  N  F  R  S  K  S  P  R  S  A  L  D  R  F  P  A  K  Q  R  K  T  Y  I  K  I  S  T  K  R  L  S  D  T  L  N  L  R  K  K  Y  *  L  Y  R  E  T  T  V  Y  Q </first_frame>
            <second_frame>  E  I  C  Q  N  A  A  G  S  T  D  H  A  T  E  R  R  G  H  D  G  P  S  W  A  P  S  P  H  T  W  C  N  Y  S  A  A  F  F  I  P  L  D  G  K  C  D  G  P  S  *  A  R  R  S  V  E  G  L  R  Y  K  I  L  Q  L  L  E  S  G  Y  *  D  H  F  S  D  L  R  D  E  P  A  G  R  T  V  I  S  M  T  D  R  H  K  L  R  N  P  T  L  G  Q  T  S  P  S  F  F  N  N  F  S  T  L  P  P  T  D  R  H  K  H  D  G  P  S  *  A  P  *  V  V  S  S  A  I  F  A  Q  N  L  R  V  Q  L  *  T  D  F  L  Q  N  K  E  K  L  I  S  K  L  A  Q  K  G  F  R  T  H  *  T  *  G  K  S  I  N  Y  T  V  K  P  R  Y  I   </second_frame>
            <third_frame>   K  S  A  K  T  R  L  G  R  R  T  T  R  R  N  V  V  V  M  T  D  R  R  G  L  R  R  P  I  L  G  A  I  I  L  L  L  S  S  F  P  S  T  A  S  V  T  D  R  H  R  H  D  G  P  S  R  V  F  V  T  K  Y  F  N  S  W  N  L  G  T  R  I  T  S  L  I  F  A  T  N  L  Q  D  G  P  S  Y  P  *  R  T  V  T  S  F  V  I  P  H  L  V  R  L  P  H  L  S  S  T  T  S  L  R  C  H  L  R  T  V  T  S  T  T  D  R  H  K  L  R  R  W  S  L  L  Q  F  S  L  K  I  S  A  F  S  F  R  Q  I  S  C  K  T  K  K  N  L  Y  Q  N  *  H  K  K  A  F  G  H  T  K  L  K  E  K  V  L  T  I  P  *  N  H  G  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80734" stop="80465"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSAKTRLGRRTTRRNVVVMTDRRGLRRPILGAIILLLSSFPSTASVTDRHRHDGPSRVFVTKYFNSWNLGTRITSLIFATNLQDGPSYP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80442" stop="80206"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHTWSDFPIFLQQLLYAATYGPSQARRTVISSVGGLFCNFRSKSPRSALDRFPAKQRKTYIKISTKRLSDTLNLRKKY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80464" stop="80252"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTVTSFVIPHLVRLPHLSSTTSLRCHLRTVTSTTDRHKLRRWSLLQFSLKISAFSFRQISCKTKKNLYQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="90376" PGL_stop="89663"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90376" e_stop="89663"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="90376" e_stop="89663" e_length="714"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90376" stop="89663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578039" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAGGGTCTTCGTTACAAAATACTTCAACTCTTGGAATCTGGGTACTGGGATCACTTCTCTGATCTTCGCGACGGACCTGCAGGACGGACCGTCATATCCATGACAGACCGTCACAAGCTTCGTAATCCCACACTTGGTCAGACTTCCCCATCTTCCTTCAGCATCTTCTCTACGCTGCCACCTACGGACCTTCACAAGCACGACGGACTGTCATAAGCTCCGTAGGTGGTCTCTTCTGCAATTTTTGCTCAAAATCTCCACGTTCAGCTTTAGACAGATTTCCTGCAAAACAAAGAAAAACTTATATCAAAATTAGCACAAAAAGGCTTTCGGACACACTAAACTTAAGGAAAAAGTATTAACTATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTATACAATAGTATTCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGACTAATCCCATCAAATCTATGCATGCTATCACTATTAGGCTCGACTTTTGTGGGTTCGAACATGACACAGACTCACCATGCACTAACACCTATCCTCTTCAATTTCTCACCGAGGTACTAACAATTCCGGTATTGCAACTAGTGTCCTCACTTTAGAACAAAATCCTCATTTTTCACACAATGATTTCAGTTTGAGTATAAAGATTAC</gDNA_template>
            <first_frame> R  G  S  S  L  Q  N  T  S  T  L  G  I  W  V  L  G  S  L  L  *  S  S  R  R  T  C  R  T  D  R  H  I  H  D  R  P  S  Q  A  S  *  S  H  T  W  S  D  F  P  I  F  L  Q  H  L  L  Y  A  A  T  Y  G  P  S  Q  A  R  R  T  V  I  S  S  V  G  G  L  F  C  N  F  C  S  K  S  P  R  S  A  L  D  R  F  P  A  K  Q  R  K  T  Y  I  K  I  S  T  K  R  L  S  D  T  L  N  L  R  K  K  Y  *  L  Y  R  E  T  T  V  Y  Q  H  P  Q  L  K  F  V  V  C  P  Q  A  T  H  Y  D  S  L  H  N  L  Y  T  I  V  F  M  F  Y  P  L  Q  S  F  G  Y  Q  S  R  L  I  P  S  N  L  C  M  L  S  L  L  G  S  T  F  V  G  S  N  M  T  Q  T  H  H  A  L  T  P  I  L  F  N  F  S  P  R  Y  *  Q  F  R  Y  C  N  *  C  P  H  F  R  T  K  S  S  F  F  T  Q  *  F  Q  F  E  Y  K  D  Y </first_frame>
            <second_frame>  E  G  L  R  Y  K  I  L  Q  L  L  E  S  G  Y  W  D  H  F  S  D  L  R  D  G  P  A  G  R  T  V  I  S  M  T  D  R  H  K  L  R  N  P  T  L  G  Q  T  S  P  S  S  F  S  I  F  S  T  L  P  P  T  D  L  H  K  H  D  G  L  S  *  A  P  *  V  V  S  S  A  I  F  A  Q  N  L  H  V  Q  L  *  T  D  F  L  Q  N  K  E  K  L  I  S  K  L  A  Q  K  G  F  R  T  H  *  T  *  G  K  S  I  N  Y  T  V  K  P  R  Y  I  N  T  L  N  L  N  S  L  F  V  L  K  R  R  T  M  T  H  Y  T  I  F  I  Q  *  Y  S  C  F  I  L  C  N  H  L  A  I  N  P  D  *  S  H  Q  I  Y  A  C  Y  H  Y  *  A  R  L  L  W  V  R  T  *  H  R  L  T  M  H  *  H  L  S  S  S  I  S  H  R  G  T  N  N  S  G  I  A  T  S  V  L  T  L  E  Q  N  P  H  F  S  H  N  D  F  S  L  S  I  K  I   </second_frame>
            <third_frame>   R  V  F  V  T  K  Y  F  N  S  W  N  L  G  T  G  I  T  S  L  I  F  A  T  D  L  Q  D  G  P  S  Y  P  *  Q  T  V  T  S  F  V  I  P  H  L  V  R  L  P  H  L  P  S  A  S  S  L  R  C  H  L  R  T  F  T  S  T  T  D  C  H  K  L  R  R  W  S  L  L  Q  F  L  L  K  I  S  T  F  S  F  R  Q  I  S  C  K  T  K  K  N  L  Y  Q  N  *  H  K  K  A  F  G  H  T  K  L  K  E  K  V  L  T  I  P  *  N  H  G  I  S  T  P  S  T  *  I  R  C  L  S  S  S  D  A  L  *  L  T  T  Q  S  L  Y  N  S  I  H  V  L  S  F  A  I  I  W  L  S  I  P  T  N  P  I  K  S  M  H  A  I  T  I  R  L  D  F  C  G  F  E  H  D  T  D  S  P  C  T  N  T  Y  P  L  Q  F  L  T  E  V  L  T  I  P  V  L  Q  L  V  S  S  L  *  N  K  I  L  I  F  H  T  M  I  S  V  *  V  *  R  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90013" stop="89750"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYRETTVYQHPQLKFVVCPQATHYDSLHNLYTIVFMFYPLQSFGYQSRLIPSNLCMLSLLGSTFVGSNMTQTHHALTPILFNFSPRY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90250" stop="90014"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHTWSDFPIFLQHLLYAATYGPSQARRTVISSVGGLFCNFCSKSPRSALDRFPAKQRKTYIKISTKRLSDTLNLRKKY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89939" stop="89715"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTTQSLYNSIHVLSFAIIWLSIPTNPIKSMHAITIRLDFCGFEHDTDSPCTNTYPLQFLTEVLTIPVLQLVSSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90375" stop="90160"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGLRYKILQLLESGYWDHFSDLRDGPAGRTVISMTDRHKLRNPTLGQTSPSSFSIFSTLPPTDLHKHDGLS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07SLe0099J13.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90272" stop="90060"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTVTSFVIPHLVRLPHLPSASSLRCHLRTFTSTTDCHKLRRWSLLQFLLKISTFSFRQISCKTKKNLYQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 193 chains have been computed
$ 
$ memory statistics:
$ 53032 bytes spliced alignments in total
$ 25 spliced alignments have been stored
$ 2121 bytes was the average size of a spliced alignment
$ 11752 bytes predicted gene locations in total
$ 6 predicted gene locations have been stored
$ 1958 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 224 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 15:27:24
-->
