<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-03 20:38:41"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E559172" ref_strand="+" ref_description="SGN-E559172 [18626]">
      <seq>cttttgtttgctcttctccacaaaatagagacttgcatatcgttgatgctgatcaatcaaagcccgtgcttgagggtttcattatagatgcctcaacagcaggtggagaattagatattacccagctagagatcaactatgagacgaccattcagcgtgcgagcattctggagcagatctgcaaatcagcaactgcacatacacccttgtctcatttcacatcttcttttgggtttgaccgagctcaaaatctatatcaatctttacctaatgggcttcttgagcatctggatctgagcaccttcttgtcggaggaggatgtcaacaaacaggttagggcaagtgatagctgcgtggatgaagtgaaagattctaaactggagataccttgttctgattatcaaccttcttacggatgtcaatttggagggaggtcaggaaatcaataccagtctcctgttggaaagttttgggaaaggatcccgtcacattctagcagttcagagaagggtttgaacttaaacccagagctcatgtgtttcccaattgaggaggatcccaatagtagtgaggagaatgagactgcagatgtggcagtctctgcggctgagaggtctcatgcaaggggaagtttggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="2507" stop="1167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2207" g_stop="1611" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1610" i_stop="1509" i_length="102">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.080" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1508" g_stop="1467" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="639" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E559172" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2207" e_stop="1611"/>
          <exon e_start="1508" e_stop="1467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTATTTGCTCTTCTCCACTAAATAGAGACTTGGATATCGTTGATGCTGATCAATCTAAGCCCGTGCTTGAGGGTTTCATTATAGATGCCTCAACATCAGGTGGAGAATTAGATATTACGCAGCTAGAGATCAACTATGAGACGACAATTCAGCGTGCGAGCATTCTGGAGCAGATCTGCAAATCAGCAAGTGCACGTACACCTTTATCTCATTTCACATCTTCTTTTGGGTTTGACCGTGCTCAAAATCTATATCAATCTTTACCTAATGGGCTTCTTGAGCATCTGGATCTGAGCACCTTCTTGTCGGAGGAGGATGTCAACAAACAGGTTAGGGCAAGTGATAGCTGCATAGATGAAGCGAAAGATTCTAAACTGAAGATACCTTGTTCTGATTATCAACCTTCTTACGGATGTCAATTTGGAGGGAGGTCAGGAAATCAATACCAGTCTCCTGTTGGAAAGTTTTGGGAAAGGATCTCGTCACATTCTAGCAGTTCAGAGAAGGGTTTGAACTTAAACCCAGAGCTCATGTGTTTCCCAATTGAGGAGGATCCCAATAGTAGTGAGGAGAATGAGACTGCAGATATGGCAGGTAAAATCCGTGATGAATTGGATTCAACAGTAGTGAAAAGTCATGTCAACAGACTACCACTTGCATCAATATCTAACTCATGTCTTAATCCCCCTGCTTCAGTCTCTGCGGCTGAGAGGTCTCATGCAAGGGGAAGTTTGGATT</genome_strand>
        <mrna_strand>CTTTTGTTTGCTCTTCTCCACAAAATAGAGACTTGCATATCGTTGATGCTGATCAATCAAAGCCCGTGCTTGAGGGTTTCATTATAGATGCCTCAACAGCAGGTGGAGAATTAGATATTACCCAGCTAGAGATCAACTATGAGACGACCATTCAGCGTGCGAGCATTCTGGAGCAGATCTGCAAATCAGCAACTGCACATACACCCTTGTCTCATTTCACATCTTCTTTTGGGTTTGACCGAGCTCAAAATCTATATCAATCTTTACCTAATGGGCTTCTTGAGCATCTGGATCTGAGCACCTTCTTGTCGGAGGAGGATGTCAACAAACAGGTTAGGGCAAGTGATAGCTGCGTGGATGAAGTGAAAGATTCTAAACTGGAGATACCTTGTTCTGATTATCAACCTTCTTACGGATGTCAATTTGGAGGGAGGTCAGGAAATCAATACCAGTCTCCTGTTGGAAAGTTTTGGGAAAGGATCCCGTCACATTCTAGCAGTTCAGAGAAGGGTTTGAACTTAAACCCAGAGCTCATGTGTTTCCCAATTGAGGAGGATCCCAATAGTAGTGAGGAGAATGAGACTGCAGATGTGGCAG......................................................................................................TCTCTGCGGCTGAGAGGTCTCATGCAAGGGGAAGTTTGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E415413" ref_strand="+" ref_description="SGN-E415413 [STM-21-C24]">
      <seq>gtttctaatattctcttttattttagtcccattcgccgtcccttctccacgtctcaactgctgaccggcgaccagtgaccggcgaccggcggaacaactagaaagttcccagcctattttacacgcaggccatattcttcgtggttatttatatcctcagaagcagtcgccgttgaaaatactcttcaccagcaacatgtctagtaagaccgatattgctttaccgctggataagttgtctttggatttaataaaacaaatggaggggcaacttagtcctgaaaggaggaaaaggacatatgtagttcttgtatcaacaggaagtttcaatcctccaacttatatgcacttgcgctgttttgagttggcaagagatgcattgacttcagaaggaatttgtgtgattggaggttacatgtcacctgtaaatgatgcatataagaagaagaatcttatatctgctgagcatcgtgttgcaatgtgccagttagcctgtaaaagctcagaatttgttatgacggatccctgngaggcaagtcaggatagctatcaacgatcattgacagttctctccagaataaaaaccgctatcagtggtggaagtttgacatccaccgacgacctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="10229" stop="13359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10490" g_stop="10685" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="0.867"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10686" i_stop="11243" i_length="558">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11244" g_stop="11328" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="288" r_length="85" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11329" i_stop="11881" i_length="553">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.887" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11882" g_stop="11955" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="362" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11956" i_stop="12251" i_length="296">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12252" g_stop="12337" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="448" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12338" i_stop="12681" i_length="344">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12682" g_stop="12765" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="532" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12766" i_stop="12962" i_length="197">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="12963" g_stop="13047" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="617" r_length="85" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E415413" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415413" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10490" e_stop="10685"/>
          <exon e_start="11244" e_stop="11328"/>
          <exon e_start="11882" e_stop="11955"/>
          <exon e_start="12252" e_stop="12337"/>
          <exon e_start="12682" e_stop="12765"/>
          <exon e_start="12963" e_stop="13047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTAATATTCTCTTTTATTTTAGTCCCATTCGCCGTCGCTTCTCCACGTCTCAACTGCTGACC-G-G--C---GACCGGCGACCGGCGGAACAACAAGAAAATTCCCAGCCTATTTTACACGCAGGCCATATTCGACGTGGTTA-TTATATCCTCCGAAGCAGATCTCCGTGGAAAATACTCTTCACCAGCAACATGTCTAGTAAGTACTCAATTTGCTTGTCTATAATTATTCTCCTTAAATTGATTGACGTTTCCAGTTTTGAGTTTTTGTTTGGTTAAAAACTGTGCGAATTAAGAAATTATAACGGATAGAATGGTGATATTCATGTAAAAAGATTGTTCTTTTACTTTTATCGACCATGTTATAGGCAGTGATTTAATTTAAGCCATCAATATTCATAAAATAGTACTGCTTTGTCTTGCTATCCACTCATACTAGTAGTCATAGTGTTGTTCCTCATAGTTTCTTGTTTTATTATGCTTTCACTTCCGTTACCTTTTTTTTTTCCTGGAGTACTTTGGACTGTTTCTCCATGAGCCGATGATCTATTGGAACAATTTTTTTTACATCCAAGGTAAGGGTAAGGTTTGCGTAGATATACCCTTTCCAGACCTCACTTTATGGGACTACATTGGGTATGTTTGTTGTTGTTGCTGTAAAGTGTGCGCTGTGACTAGCAGATGTGAGTCAGTATTTTTGGTTGTTGATTCTGCTCTCCAGTTGTTTTCTTGCTAACCAATCTGTTTAAATTTGTAGGTAAGACCGACATTGCTTTACCGTTGGATAAGTTGTCTTTGGATTTAATAAAACAAATGGAGGGGCAACTAAGTCCTGAAAAGAGGTAAGTTTAGTATGTGATCTTGGACTAGCCTTTCTACTGTAGTTTTGAGTGTGTGATTTAACGGCTTGTATTGTCATGTCATAGTTTCAATGTTGGCTCACTTGTTTTATAATGCCCATTTACCTTTCGTTCTCCAGAGCTGCCAATTCACAATTGTCATGAATTGTGCTTGTTTATGACAGGAACTGATATTAAGCTTCCGAAATGTTAGTTATCACCCTTTTTTTTTTAAAGAAATGTTTTGTTATTTATGTTGGGAAGGGGTATAGGTCAATCACCATAATGGACAAGATTATTACAAGGAAGTGAAGTTGAGTGGTTTCCAAGTCTACTTTCCAATGTGGAGACTCTCACAACTGAAGTAGTGTTGTAATACTTCCATGGTATATTGTAAGGCATAAATAAAAAAGTGAAAAAAAGCAAGACCTGAATATACATACTTGCCAACGTAGTTAGCTTTATTATGGATTTTATTATATTATTTATTTTTTACCCTTCTTCCTCTGATTCTATCCCTGCTGTAGATACTTGCTAACTCTCTCTTTCTTACTAGGAAAAGGACATATGCAGTTCTTGTATCAACAGGAAGTTTCAATCCTCCAACTTATATGCACTTGCGCTGTTTTGGTAAGTACTATCTAACCTCTACTATGTTTCCCCGCTGAGCTTTTTTCTTCTTTTTATCCCTTTATTCTCTATTAGGGGAGGGAGGGAGGGTTGTGGGACTGAAGCAGGTGTATTTGCGTGTGTGCCAACGAGAAGAATCTTCCATATTTTTCTTCTATTTAGATGAAAGCAGCAAACCATATATAGTCTTAAGTCCTCCAGCACATAAGCTGCTCAGAGTTAATATGTTGTTAGAATATGAAGTTTATTTAATCTGTTTATCGGGTGTTGCTAAACTTTTGGTGATATTAATTCAGAGTTGGCAAGAGATGCATTGACTTCAGAAGGAATTTGTGTGATTGGAGGTTACATGTCACCTGTAAATGATGCATATAAGAAGAAGGTATTTAGCATATCTCCAGCAGTGAAGCTGCTAAAAATGAGTAATTGGAAGTAATTAAAAGAAAACATGTACTACTAGCTTTACTATATAATCACTTTCTTCTGATCCATCTCATTTTGGATTATGAATCTTAGTCTATGTTGTTTCTGGTCTGGGACCTGAAATTTCTTTATACTAGTGCATCCTGTTCTTAGTCATGATGTTTTGTTTCTTAGTTTCTTTAGCATTTATACTGGTCAAATATATATTATTAAAAGAAATTGAACATGCTTTATATCTTGTGTCAATGTTACTGACACGCAAAAAATGATCCTTCCTAATTTATTTGCTCCTTGTTTTTGCAGAATCTTATATCTGCTGAGCATCGTGTTGCAATGTGCCAGTTAGCCTGTAAAAGCTCAGAATTTGTTATGACGGATCCCTGGGAGGTCTCTCTCTAACTACTTATCTCTTTCTCCTCCTCCTCCCCTCCAGAAAAAAATATCCCCAAAACCTCCCTTTTTAGTGTGAGTAATAAGGTCTAGTTTTATAATCGATGTATTTACACCACTGCTGCAGTCTGTGATAAACTAACTTTCCTTAATCCTGCCAATGGACAATGATTTTTCTTGTATTATTTGTGCAGGCAAGTCAGGATAGCTATCAACGAACATTGACGGTTCTCTCCAGAATAAAAAGCGCTATCAGTGGTGGAAGTTTGACATCCACCA</genome_strand>
        <mrna_strand>GTTTCTAATATTCTCTTTTATTTTAGTCCCATTCGCCGTCCCTTCTCCACGTCTCAACTGCTGACCGGCGACCAGTGACCGGCGACCGGCGGAACAACTAGAAAGTTCCCAGCCTATTTTACACGCAGGCCATATTCTTCGTGGTTATTTATATCCTCAGAAGCAG-TCGCCGTTGAAAATACTCTTCACCAGCAACATGTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGACCGATATTGCTTTACCGCTGGATAAGTTGTCTTTGGATTTAATAAAACAAATGGAGGGGCAACTTAGTCCTGAAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGACATATGTAGTTCTTGTATCAACAGGAAGTTTCAATCCTCCAACTTATATGCACTTGCGCTGTTTTG........................................................................................................................................................................................................................................................................................................AGTTGGCAAGAGATGCATTGACTTCAGAAGGAATTTGTGTGATTGGAGGTTACATGTCACCTGTAAATGATGCATATAAGAAGAAG........................................................................................................................................................................................................................................................................................................................................................AATCTTATATCTGCTGAGCATCGTGTTGCAATGTGCCAGTTAGCCTGTAAAAGCTCAGAATTTGTTATGACGGATCCCTGNGAG.....................................................................................................................................................................................................GCAAGTCAGGATAGCTATCAACGATCATTGACAGTTCTCTCCAGAATAAAAACCGCTATCAGTGGTGGAAGTTTGACATCCACCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E415414" ref_strand="-" ref_description="SGN-E415414 [STM-21-C24]">
      <seq>tgtaaaagctcagaatttgttatgacggatccctgggaggcaagtcaggatagctatcaacgatcattgacagttctctccagaataaaaaccgctatcagtggtggaagtttgacatccaccgacgacctcatggtcatgctagtatgtggttctgatctgctagaatctttcagcacacctggtgtttggatacctgagcaggtcagagccatatgtagagacttcggcttggtttgtgtccgaagaggtggccaggatgttgaaaaaatcatcaccggtgatgaaattttgaatgaatataagaagaatatccgagtcgtggatgaagtagtaccaaatgggatcagttcaacgggactaaggaactgcatctcaaaagggttatcagtgaaatacttgacagccgatgaagtaattgattatatcaatcaacacaatctttacagagggcaatgatccaacaactgactccaatcgtaacttattcttttttgtaaaataagtgcaagtacatatcctgcttcatgtgattaagaacacaaaaaaccccaagatnttcactaaaagtgcatctcgtccatttgggacttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="12427" stop="14704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12727" g_stop="12765" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12766" i_stop="12962" i_length="197">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12963" g_stop="13047" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="124" r_length="85" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13048" i_stop="13594" i_length="547">
            <donor d_prob="0.647" d_score="0.96"/>
            <acceptor a_prob="0.930" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13595" g_stop="13674" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="204" r_length="80" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13675" i_stop="13740" i_length="66">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13741" g_stop="13842" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="306" r_length="102" r_score="0.951"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13843" i_stop="14044" i_length="202">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.905" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14045" g_stop="14103" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="365" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14104" i_stop="14195" i_length="92">
            <donor d_prob="0.922" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14196" g_stop="14404" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="577" r_length="212" r_score="0.866"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="595" polyA_stop="605"/>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E415414" ref_strand="-">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415414" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12727" e_stop="12765"/>
          <exon e_start="12963" e_stop="13047"/>
          <exon e_start="13595" e_stop="13674"/>
          <exon e_start="13741" e_stop="13842"/>
          <exon e_start="14045" e_stop="14103"/>
          <exon e_start="14196" e_stop="14404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAAAAGCTCAGAATTTGTTATGACGGATCCCTGGGAGGTCTCTCTCTAACTACTTATCTCTTTCTCCTCCTCCTCCCCTCCAGAAAAAAATATCCCCAAAACCTCCCTTTTTAGTGTGAGTAATAAGGTCTAGTTTTATAATCGATGTATTTACACCACTGCTGCAGTCTGTGATAAACTAACTTTCCTTAATCCTGCCAATGGACAATGATTTTTCTTGTATTATTTGTGCAGGCAAGTCAGGATAGCTATCAACGAACATTGACGGTTCTCTCCAGAATAAAAAGCGCTATCAGTGGTGGAAGTTTGACATCCACCAGTAAGATCCACAACTGCCTTGAGTCGATCTGTGTTGGAATAGTGTTGATAGGAATTTATGGCCAATGGTTAATAAGAAACTTGCAAACTTCCTGAAACCAGCTTTTTTCTTTATGATAACGATTCTTTCTTTTTCTTGGTAATTAGACTTTTCATTAATCACCAAAGTGCTGAATTACAAATCTATAGAATGGCCAACACAGCCAGCTATCTCAAAGAAAACCAACTAGTCCACCTAACACAAAGGAACTCAAGAATACCATGTAGCAAAGGCCTTAATAGGCAGCTAGAAAGAAAACTTGTTCAAAGATTCCACTTACCGTAAATCAATGTGCATGTAAGTTACTACTTAATAAACTACTTATTACTTGGTCGCTATGCAACCCTAAGAAACTGTGCAAAAGTGAACATGCCATTCTATCTGTAAGGGAGGGAATAGTTGGTTAACATTTTAAATTTGCATTATCTATCCAAGTGAAATTGTTTTAAAGCTATTGTAAATTACGAAGTTCCATTCAAGTTCTAAACACTGGTTATTTTTCTTTCAGATGACCTCATGGTTACGCTGGTATGTGGTTCTGATCTGCTAGAATCTTTCAGCACACCTGGTGTTTGGATACCTGAGCAGGTAAAGTAATAACCTCCTTCACGTTGCACTGAAATTATGCAATATGTTCATCTGTTGGTTTTCTAGGTCAGGGCCATATGTAGAGACTTCGGCTTGGTTTGTATCCGAAGAAGTGGCCAGGATGTTGAAAAAATCATCACTGGTGACGAAATTTTGAATGAATATAAGGTAACTTCGTTTAGAACTCCATATCCTAGTCCGTTGTTCTCTCATTTCAGATGATCGACTGTTATACAGCGTCACTAGTAGTCGTACTAAATATTATTGAAATGTTAGCATGCCAAAATTCACAGACAGCTTCACACTTCCCATCCTCTTCTATATTGTCGAAGAGACATGTAACATACGGTATACTCATGTAAAATTGCAGAAGAATATCCGAGTCGTGGATGAAGTAGTACCAAACGGAATCAGTTCAACGGGACTAAGGTAAAAAAATCATCGATCTGACTAGCTAGAATGACATGAAATGAATCTAGAGTAAAAATGGTGTACAAGCTAAATTTTTTTTCTTATGTCAGGGACTGCATCTCAAAAGGGTTATCAGTGAAATACTTGACAGCTGATGAAGTAATTGATTATATCAAACAACACAATCTTTACAAAGGGCAATGATCCAACAACTGACTCCAATTATAA-TT-TT-TTTTAAAAAAATAAAGTGCAAGTACATATCCTACTTCATGTGATTAAGAACACACATAAAACCCAAG-TTCTCTTTAAAAGTGCATCT</genome_strand>
        <mrna_strand>TGTAAAAGCTCAGAATTTGTTATGACGGATCCCTGGGAG.....................................................................................................................................................................................................GCAAGTCAGGATAGCTATCAACGATCATTGACAGTTCTCTCCAGAATAAAAACCGCTATCAGTGGTGGAAGTTTGACATCCACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACCTCATGGTCATGCTAGTATGTGGTTCTGATCTGCTAGAATCTTTCAGCACACCTGGTGTTTGGATACCTGAGCAG..................................................................GTCAGAGCCATATGTAGAGACTTCGGCTTGGTTTGTGTCCGAAGAGGTGGCCAGGATGTTGAAAAAATCATCACCGGTGATGAAATTTTGAATGAATATAAG..........................................................................................................................................................................................................AAGAATATCCGAGTCGTGGATGAAGTAGTACCAAATGGGATCAGTTCAACGGGACTAAG............................................................................................GAACTGCATCTCAAAAGGGTTATCAGTGAAATACTTGACAGCCGATGAAGTAATTGATTATATCAATCAACACAATCTTTACAGAGGGCAATGATCCAACAACTGACTCCAATCGTAACTTATTCTTTTTTGTAAAATAAGTGCAAGTACATATCCTGCTTCATGTGATTAAGAACACA-AAAAACCCCAAGATNTTCACTAAAAGTGCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428143" ref_strand="-" ref_description="SGN-E428143 [STM-49-F4]">
      <seq>caggatagctatcaacgaacattgacagttctctccagaataaaaaccgctatccgtggtggaagtttgacatccaccgatgacctcatggtcatgctagtatgtggttctgatctgctagaatctttcagcacacctggtgtttggatacctgagcagagacttcggcttggtttgtgtccgaagaggtggccaggatgttgaaaaaatcatcaccggtgatgaaattttgaatgaatataagaagaatatccgagtcgtggatgaagtagtaccaaatgggatcagttcaacgggactaaggaactgcatctcaaaagggttatcagtgaaatacttgacagccgatgaagtaattgattatatcaatcaacacaatctttacagagggcaatgatccaacaactgactccaatcgtaacttattcttttttgtaaaataagtgcaagtacatatcctgcttcatgtgattaagaacacaaaaaaccccaagatttcactaaaagtgcatctggtaatattgggacttcatggacaacgattagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="12669" stop="14704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12969" g_stop="13047" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13048" i_stop="13594" i_length="547">
            <donor d_prob="0.647" d_score="0.94"/>
            <acceptor a_prob="0.930" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13595" g_stop="13674" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="159" r_length="80" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13675" i_stop="13757" i_length="83">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.298" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13758" g_stop="13842" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="244" r_length="85" r_score="0.953"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13843" i_stop="14044" i_length="202">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.905" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14045" g_stop="14103" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="303" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14104" i_stop="14195" i_length="92">
            <donor d_prob="0.922" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14196" g_stop="14404" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="514" r_length="211" r_score="0.876"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E428143" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428143" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12969" e_stop="13047"/>
          <exon e_start="13595" e_stop="13674"/>
          <exon e_start="13758" e_stop="13842"/>
          <exon e_start="14045" e_stop="14103"/>
          <exon e_start="14196" e_stop="14404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATAGCTATCAACGAACATTGACGGTTCTCTCCAGAATAAAAAGCGCTATCAGTGGTGGAAGTTTGACATCCACCAGTAAGATCCACAACTGCCTTGAGTCGATCTGTGTTGGAATAGTGTTGATAGGAATTTATGGCCAATGGTTAATAAGAAACTTGCAAACTTCCTGAAACCAGCTTTTTTCTTTATGATAACGATTCTTTCTTTTTCTTGGTAATTAGACTTTTCATTAATCACCAAAGTGCTGAATTACAAATCTATAGAATGGCCAACACAGCCAGCTATCTCAAAGAAAACCAACTAGTCCACCTAACACAAAGGAACTCAAGAATACCATGTAGCAAAGGCCTTAATAGGCAGCTAGAAAGAAAACTTGTTCAAAGATTCCACTTACCGTAAATCAATGTGCATGTAAGTTACTACTTAATAAACTACTTATTACTTGGTCGCTATGCAACCCTAAGAAACTGTGCAAAAGTGAACATGCCATTCTATCTGTAAGGGAGGGAATAGTTGGTTAACATTTTAAATTTGCATTATCTATCCAAGTGAAATTGTTTTAAAGCTATTGTAAATTACGAAGTTCCATTCAAGTTCTAAACACTGGTTATTTTTCTTTCAGATGACCTCATGGTTACGCTGGTATGTGGTTCTGATCTGCTAGAATCTTTCAGCACACCTGGTGTTTGGATACCTGAGCAGGTAAAGTAATAACCTCCTTCACGTTGCACTGAAATTATGCAATATGTTCATCTGTTGGTTTTCTAGGTCAGGGCCATATGTAGAGACTTCGGCTTGGTTTGTATCCGAAGAAGTGGCCAGGATGTTGAAAAAATCATCACTGGTGACGAAATTTTGAATGAATATAAGGTAACTTCGTTTAGAACTCCATATCCTAGTCCGTTGTTCTCTCATTTCAGATGATCGACTGTTATACAGCGTCACTAGTAGTCGTACTAAATATTATTGAAATGTTAGCATGCCAAAATTCACAGACAGCTTCACACTTCCCATCCTCTTCTATATTGTCGAAGAGACATGTAACATACGGTATACTCATGTAAAATTGCAGAAGAATATCCGAGTCGTGGATGAAGTAGTACCAAACGGAATCAGTTCAACGGGACTAAGGTAAAAAAATCATCGATCTGACTAGCTAGAATGACATGAAATGAATCTAGAGTAAAAATGGTGTACAAGCTAAATTTTTTTTCTTATGTCAGGGACTGCATCTCAAAAGGGTTATCAGTGAAATACTTGACAGCTGATGAAGTAATTGATTATATCAAACAACACAATCTTTACAAAGGGCAATGATCCAACAACTGACTCCAATTATAA-TT-TT-TTTTAAAAAAATAAAGTGCAAGTACATATCCTACTTCATGTGATTAAGAACACACATAAAACCCAAGTTCTCTTTAAAAGTGCATCT</genome_strand>
        <mrna_strand>CAGGATAGCTATCAACGAACATTGACAGTTCTCTCCAGAATAAAAACCGCTATCCGTGGTGGAAGTTTGACATCCACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCTCATGGTCATGCTAGTATGTGGTTCTGATCTGCTAGAATCTTTCAGCACACCTGGTGTTTGGATACCTGAGCAG...................................................................................AGACTTCGGCTTGGTTTGTGTCCGAAGAGGTGGCCAGGATGTTGAAAAAATCATCACCGGTGATGAAATTTTGAATGAATATAAG..........................................................................................................................................................................................................AAGAATATCCGAGTCGTGGATGAAGTAGTACCAAATGGGATCAGTTCAACGGGACTAAG............................................................................................GAACTGCATCTCAAAAGGGTTATCAGTGAAATACTTGACAGCCGATGAAGTAATTGATTATATCAATCAACACAATCTTTACAGAGGGCAATGATCCAACAACTGACTCCAATCGTAACTTATTCTTTTTTGTAAAATAAGTGCAAGTACATATCCTGCTTCATGTGATTAAGAACACA-AAAAACCCCAAGATTTCACTAAAAGTGCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331411" ref_strand="+" ref_description="SGN-E331411 [cTOD-9-L15]">
      <seq>ggaacgatgcccttcttgtggaattgagtatatgagggattttgaaatagaaactattgggttgaaggaaactgcacggcgttgttccaaggtgggctgtggtgcaagacttaaagacacagttcttgactgggaggatgctctacctccaaaggagatgaatccagctgagagacactgcaaaatggctgatgttgtgttatgtctagggacaagtttgcagatcacccctgcctgtaatttgcctctaaaatcactcaaaggcggtggaaagattgtaatagttaatcttcagaaaactcccaaggacaagaaagcaagcctactgattcatggtcttgtagacaaggttatcacaggagtcatggaattcctcagtctgcgaatcccaccttttattagaattgatcttctccagaccatttttactcaagcctcaagtcttgatgaaaaatatgtaaattggagccttgcagtggcaagcgtccatggaaatagagcaccattgccttttatcaaatctgtagaggtttctttttcagaaagtcaaaacatgaaagcggctgtcctggataaacaacctctttatctgaaaaggcggacagttaagagtacaaatccttttaacattatgatgaaattgaacttcagtgatggttgcaagtgctcatcggctgaaatcatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="35859" stop="30771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35559" g_stop="35533" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35532" i_stop="35375" i_length="158">
            <donor d_prob="0.952" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35374" g_stop="35266" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="136" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35265" i_stop="34958" i_length="308">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34957" g_stop="34878" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="216" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34877" i_stop="34710" i_length="168">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34709" g_stop="34631" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="295" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34630" i_stop="33962" i_length="669">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33961" g_stop="33908" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="349" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="33907" i_stop="33445" i_length="463">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33444" g_stop="33348" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="446" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="33347" i_stop="33126" i_length="222">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33125" g_stop="33043" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="529" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="33042" i_stop="31916" i_length="1127">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="31915" g_stop="31848" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="597" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="31847" i_stop="31161" i_length="687">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.875" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="31160" g_stop="31071" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="687" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E331411" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35559" e_stop="35533"/>
          <exon e_start="35374" e_stop="35266"/>
          <exon e_start="34957" e_stop="34878"/>
          <exon e_start="34709" e_stop="34631"/>
          <exon e_start="33961" e_stop="33908"/>
          <exon e_start="33444" e_stop="33348"/>
          <exon e_start="33125" e_stop="33043"/>
          <exon e_start="31915" e_stop="31848"/>
          <exon e_start="31160" e_stop="31071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACGATGCCCTTCTTGTGGAATTGAGTAAGATTCCGTCTTTTTATGCAGCATGCTATCCTCTGCTACTATGCATGTTCCCACATTCATGTATATTCACTCAATTTTTTTTTATTGTATGTAGTTTTTCTGGTAACATTATGGTGATTGCTTATAAGTCTGTTTTTGTGAATTGATCCATGAAGGTATATGAGGGATTTTGAAATAGAAACTATTGGGTTGAAGGAAACTGCACGGCGTTGTTCCAAGGTGGGCTGTGGTGCAAGACTTAAAGACACAGTTCTTGACTGGGAGGTAACCATAAACAGCTTTTTGTTTAATAACAAAGTCCTAGGATGAAGGATCTGGGCTTCTCTTTATAGTTGCACAGTTACATTCCATGGCCCTTTAGTAGTGACAGTTAAAGATATAGACAGAAGTTTGACAGGTTGTACCCTAATGAGCATCCAATGATTAAGAAAAAGTTGTAATAGTTTCAATGTTTTTTTTTTCGTTATCTGCTACTTCGGCCAACGCATCAAAGATTTTTTATGGCTAAAATATGATTCCACGTATCACTCTGTTGTTGACCTCATCCATTCCCCTCCTGTTTTTCTCCTCAGGATGCTCTACCTCCAAAGGAGATGAATCCAGCTGAGAGACACTGCAAAATGGCTGATGTTGTGTTATGTCTAGGGACAAGGTAAAGCTAACTAACTATTTGACTACCTCTGTAATCTGGAATTCTGATGCATGATGCTAAATGAGTTCTTACAGTGTTTGTTGACTCTAAACTGTTAAACTATTTACTTCCGTCATTCTTTGCCCTTAATCATGTCAGGAGATAAAATTACTTGTTCTACTCTTGCAGTTTGCAGATCACCCCTGCCTGTAATTTGCCTCTAAAATCACTCAAAGGCGGTGGAAAGATTGTAATAGTTAATCTTCAGGTATATTATTCCTTGGGCCAAATGTAACATCAGCAAACACATTTCCCATATTTCCATTGACCCTAGTTTTGATGATAGAAATTGCATCAGAGCCTCATAATCAAACCCCCCCCCCCCAAAAAAAAAAAAATATTTTGCATTGCTTTGTCATTTAAGATTTATCTGTTTTTAGTGTACTGCCATGTTTTAATCAAAAACAACAAATATTACTTTCTGTTCTCAAATAATTGCAGTTATTTCTCAATCACTAAATCATTTAGGCAAAGCTATCATTTTCCTTGCAATGCACATATGGGACTCCTAGCTTATTAGTCTGCTGTACTTTGCCATGATAAATGATTCAGGCCATGCTTATCAGAGCCAAAAAATAAAAGGAGATAAAGGCTTTCAGTCTCTGTAGATGCTTAATTTTGAATTTTCTACTAGGTCAAATATAAGAGGATCTCTGAGGGAATTAGAAAGTAAAGCTTTAATTATCCCGAGGATGAAAATTTCACAAGTTTCATATCAAAATGTTAAAGATAGGTGAATATTTCTTGCTCATATATTGTGACCTTGGCAGTGACTCTACTTGAAAATATTCTCTGCCGATCATCGATGGAAAATTTGTTGGATTAATAGGAGTTCATCTGTTACTTAGCTCTTATATCCTCGTCCATTATTTTGCAGAAAACTCCCAAGGACAAGAAAGCAAGCCTACTGATTCATGGTCTTGTAGACAAGGTAACATATGTTTGTTGTTGTACCTCTATGCTACTGAAAGTTGTTATCATGGTTCGTAGATTCTGAATAGTAAACATTAAATTATTGCTTGGTGAGGTTTCACATGTGGAATTGCTAATTGAAATATATAACCTTCATCTGACGACTTGGACTTAGTAGGTGCTAACTCTTTAGTTCAAAGTCAATGTTTATTCGTTAACCAGGTGCTTGGGGCATCACAAGCCCCCCCTTCCTTCCCTCCCCCCTCCCCCTCAACCTCAAATGTCCTTGAAGTGACTTACAAATGGTTTTGTTTAGGCATGTCTAATGGCTCCCATTTGATTACATGCGAATTTAGCTATCAGACCTATATGCAAATTCACATGTTCATATATTCTTTTTCTTATGGTACTTGGTCTGGAAAAAGATTTGTACTTTTGATAAATCCTGTTTCCAGAATGTTTACCAATATAGTTATGAACAGGTTATCACAGGAGTCATGGAATTCCTCAGTCTGCGAATCCCACCTTTTATTAGAATTGATCTTCTCCAGACCATTTTTACTCAAGCCTCAAGTCTTGGTAACTAACCTGAATTTGTGCCTATCTTCTTTTCATTGAACTGTCCATTTGGTGTTTTGAAGTCCTCAAGATCAAAAGACAGTTTCACTTGTACTGTTATTTTGCAAGCAATCTCAGTTTGTGTGAATGTGCACAAAGCAAGTTACAATTGATCTGGTCCTCGTTTGAGTGGGTCATTCATTGAATATGTCTTTTGATTTATCTAATTTACTTGTTTTGCAGATGAAAAATATGTAAATTGGAGCCTTGCAGTGGCAAGCGTCCATGGAAATAGAGCACCATTGCCTTTTATCAAATCTGTAGAGGTGAGTTAATGTTTATAGCTGTGTCTGCAGATTCTGCTGATTATGATGAATACACATGTATGTTCTTATAGAATATAAGTACTGTGGAGGCTCAGTGTCTTCCTCTCCTCTCACAGCAACCCCCAACCCCACGCACACTTACATTATTGCACCTCTTAATCAAGAAGTGAAGGAAAAAAATTTCGTGCCATGCCTTGCCTCGTCCTCCCTTCTTTTTTTTTTTTGCCAGGAATCACGGTTATTAAATAGAAAAAAAGTAAGCATGGAATCAATAGCTAGCAGCGGGTGCATCAATTGCATAATCACTGGCAGAGTCAGCATTATCCACTGATAAACCACGACCTTTATGAGTTATTCCTTTAATATATTTGATTAGTTATGTAGACTTGATTGAAATAAAATGATCTATCACTTTAGGACTTGGGGAAATGGCTCTGTACGCTTGCAGCAAATCAGAACATTATGACCTTCCTTTTGGAGTCTCTTCCTAAAGTAAAAGCGAATTCGTAGGTTAGCTCTTGCCTCTTTTGAGGACCTATGGCTCTGTTCACCTATCCTGTGTATCTCTTGTTTGAGGTATGCAGATCCAAGGCTTTCGGAATCTGTTCTGGTACCATATGAGCCAAGAGATGACAATGATAACAACAACATACCCCCGTATGACAATGATAAATGGGCTCTAAAAATGTGAGCAGGGACGTGGCAAGTAAAAGCGAGTGTGAATAGTCCTACTGTAAAAGTGTTGATGCTACTTCAACTTACCTCAGTTTTTTCTGTCGATTGAGTGAAGCAATTACTTTTTGTGCTGACTGTGAGTAGCTTAGACCTTTTTGACCTTTTCTTTTTGGGATGAAGTAACATGTTATCATTAAGAAGGCATCAAGAAGATGCATAAGGAACAAAAAATACAAAGAAGTTGACTGTGAGATCCTGTTGCTACAAAAAAACTATGCTAACGGAAGATGTTTGTTACGATGCTCGTTACTTGTCTCATTTGCAAAACAGTGAAATATCCTGTATTTCTTTTCCTTCAGTAAATTATTGTCATCAGTACTAGTCCTTAGCCTTCATAAACATTCTGGATCTGTTATGGTAACAGCTTTGCTTCTTTTGAAATGGAACTGTAGGTTTCTTTTTCAGAAAGTCAAAACATGAAAGCGGCTGTCCTGGATAAACAACCTCTTTATCTGAAAAGGTAGTTTTATAACTTGAAACTTGCTATGTTGAATGTGAAATATAATCTTGTTCAGTCTTTGTAATACATTTTCCTCTGGCATAGTTGCTTCCGTATATTCAAAATATTTTGCTCTTGTATTAGTAATTCAAGATTTTCTAATTGATTCATCAAAATATCATGTAGAAAAGGATGTTTAGATTATCCGACAATCTTGATCACACATTTTCCAGCTTATGGATATATTTGAAAAGAAAGATGTTTTCATTGTCAACGAAACTGTAGCATCCAAAAAATAATTTTAACAATCATTTATGTGTTCCTCTCTTGTTTGCATATCATTACCCTAGTCATAATCTAACCTACTTAAATGGAAAAATAAAGAAATATAAATTGGACAAGTAATACAATGAGAAAAGGACAATGAGAGGTAATATCATTTTAACAGTTTCCATTTTCTAGCCCAAAAAGGAAAAGAAAAGAAGACTATAGTTGATGTAAAAAGTCAGTATGCTAAACTCAAAGTCATTGATGAGGAAAAAATCGTAGCTAAGTAAAGGTGAAATCTTACCCATGTTTGAATTTATCTCAGCGGTATATGCTAGTTTTCCCTATTAGTTATTGGTGAGGGTTTATTTCATATGTTCACTGAAGTTATAAGCTCTCTCAAATCTGAGACATTCTTATTCAACTCCTATTCCTTGTCAGGCGGACAGTTAAGAGTACAAATCCTTTTAACATTATGATGAAATTGAACTTCAGTGATGGTTGCAAGTGCTCATCGGCTGAAATCATGAT</genome_strand>
        <mrna_strand>GGAACGATGCCCTTCTTGTGGAATTGA..............................................................................................................................................................GTATATGAGGGATTTTGAAATAGAAACTATTGGGTTGAAGGAAACTGCACGGCGTTGTTCCAAGGTGGGCTGTGGTGCAAGACTTAAAGACACAGTTCTTGACTGGGAG....................................................................................................................................................................................................................................................................................................................GATGCTCTACCTCCAAAGGAGATGAATCCAGCTGAGAGACACTGCAAAATGGCTGATGTTGTGTTATGTCTAGGGACAAG........................................................................................................................................................................TTTGCAGATCACCCCTGCCTGTAATTTGCCTCTAAAATCACTCAAAGGCGGTGGAAAGATTGTAATAGTTAATCTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCCCAAGGACAAGAAAGCAAGCCTACTGATTCATGGTCTTGTAGACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATCACAGGAGTCATGGAATTCCTCAGTCTGCGAATCCCACCTTTTATTAGAATTGATCTTCTCCAGACCATTTTTACTCAAGCCTCAAGTCTTG..............................................................................................................................................................................................................................ATGAAAAATATGTAAATTGGAGCCTTGCAGTGGCAAGCGTCCATGGAAATAGAGCACCATTGCCTTTTATCAAATCTGTAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTTTTTCAGAAAGTCAAAACATGAAAGCGGCTGTCCTGGATAAACAACCTCTTTATCTGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGACAGTTAAGAGTACAAATCCTTTTAACATTATGATGAAATTGAACTTCAGTGATGGTTGCAAGTGCTCATCGGCTGAAATCATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274238" ref_strand="+" ref_description="SGN-E274238 [cLEN-15-I15]">
      <seq>cacttcttggggtatacctgattttcgtggtcccaagggtatttggactcttcatagagaagggaaagcgctaccagaagcatcattgccttttcatcgtgcaactccaagcatgacacacatggccctagtggaactagagaaggcgggttttctaaagtttcttataagccagaacattgatggccttcatcttcgctctggaattccaagggagaagctttctgaattacatggggattcttttatggaacgatgcccttcttgtggaattgagtatatgaaggattttgaaatagaaactattgggttgaaggaaactgcacggagttgttccaaagtgggctgtggtgcaagacttaaagacacagttcttgactgggaggatgctctacctccaaaggagatgaatgcacctgagagacactgcaaaatggctgatgttgcgttatgtctagggacaagtttgcagatcacccctgcctgtaattagcctctaaaatcactcagaggctgtggaaagattgtaatagtgaatcttcagaaaactcccaaggacaagaaagcaagcctactgattcatggtcttgtagacaaagctatcacaggagtcatggaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="38634" stop="33591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38334" g_stop="38280" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38279" i_stop="37063" i_length="1217">
            <donor d_prob="0.936" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37062" g_stop="36943" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="175" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36942" i_stop="35634" i_length="1309">
            <donor d_prob="0.790" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35633" g_stop="35533" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="276" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35532" i_stop="35375" i_length="158">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35374" g_stop="35266" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="385" r_length="109" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="35265" i_stop="34958" i_length="308">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34957" g_stop="34878" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="465" r_length="80" r_score="0.962"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="34877" i_stop="34710" i_length="168">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.977" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="34709" g_stop="34631" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="544" r_length="79" r_score="0.949"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="34630" i_stop="33962" i_length="669">
            <donor d_prob="0.980" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="33961" g_stop="33908" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="598" r_length="54" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E274238" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38334" e_stop="38280"/>
          <exon e_start="37062" e_stop="36943"/>
          <exon e_start="35633" e_stop="35533"/>
          <exon e_start="35374" e_stop="35266"/>
          <exon e_start="34957" e_stop="34878"/>
          <exon e_start="34709" e_stop="34631"/>
          <exon e_start="33961" e_stop="33908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTCTTGTGGTATACCTGATTTTCGTGGTCCCAAGGGTATTTGGACTCTTCAGGTATTGTTGTAGTTATATCAGTGAATTGCAAGCCCCTCTTTCTAAAAGCACATTGCTTGACATGTTTCTACTGTTGATATCCATGTTAAAATGTTGATATTTGATAATTGAATGCTGCCCTTTCGACCTGATTCTAGCTTATTTGGTCAGCCATTATCTCCAATCCTTCTTTCTACCTGCAATGTCATCTTTTAGGCTGGATATTTGGGAGCTGAGAGGAGGATGTGTTGATCATCTAAAGGTGGTGCAGAGTTTTCTTTTTCTCCTTTGTGTATTTGATCTGGGAAAGTTATATAAATAAGTGGATGAACACTTTGCACAATAAAGTTGTTTGATAGATTCTATCACTTTGCTTGGTAATAATGACATGAATTAAGGAAGGTGGCCTGAAAGGAATGATCTATCTTACGATGGGGGGAGCTGTTTTCTCTTGTGCGAATATGTCAAATTTACTGACATGCATGATACACCAAAATTGTCTTTTTATGTGTTATTGTTTGTGTATAGTGTCTAGTTCTCTTATTTCATTTTTAATATTGTATTGACACTAATCTCTTTACTAAGTAGGAAGAAGCTATTAAATACACTATAGTTTATATGTGCATATGGATTGCACAAGCAGTTTTATTCTTTTCTATGTTGCTCTGGCCTCCAAAAATGATGTTGTACCCGTGTCAAATCCTTCAAAATGCATAGCATTTAGAGGATCCAACACACAACGAGCTGTATATTTGAAGTGTTCGAGTAACATAGATTTTTTTGATAACTGTGGTGTCCGGGATAGATTGTGAGCATCTCAACTATTCCACCGCGTGTTTGCTATCCCTACCACCACATGTATCGGTTAAATCTTCTCACCAAAGGCTTAGATGGATGGGAATAAACCACTAGTGTTCTGTTATCTTTGGGGGGATTTGAATCCTGGTTTCCAAGGTTTTCACTTACTTCATTGACTGCTAGTTACACCCTTAAGTGCACAAGCATTTGTATTATTATCATTCATTGAGATATGAACAGATAATTTCTATTATTCCTTAGGGCATTTGATGGACAACATTGCAGTAAAGTTGTCAGGATCAAGCAATGGTTATGATGTGAATGTCTTTATATAGTGGTGGAGCATTTTCCATGGATTAGAATAGTATAACAATTCTTTACCGCTAAAGAATTATGAGCCATATTTTATCTTCTTATCCCTTTTATTTAACTGATTGTAGAGAGAAGGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTCCAAGCATGACACACATGGCCCTAGTGGAACTAGAGAAGGCGGGTTTTCTAAAGTTTCTTATAAGCCAGGTGTGGAATTATTGGTTTCTTACTATATGGGTGTGTTTAACGTTTGTATGGTTATTAATTATATCACTTCAGCTTTGTGTTTGTAGCTAGTGCTGCTTTCTAAATGAAGTGGCAATTTCAACTTCCGATCACACTCCTGTTTTTCATTTCTTCTGATTAGTCATTTAGTTGTCCATTTCCATTCCCAGGAAAAGTTCTGTTCTGCCCCTTCCAATGTCCTATGTTGTTCCTCGCTGTTAAACGAGGTGAGAGCTGCTCTATGCTCACTCTTCTTGCTTGGGGTCTATGCCTGAAGCCACATCTATCTTTGACATGCTAATCGATAGCTAGGGCTGTCAATTGAACACACCCATTAATCTTCGACTTAGATTGCCTTGGAAGAATGTTATAGGATAGATGTATGAATTAAATCACACAACCCTTAAATAGTTTTCATATTGTTACTAGTGATTTGCACTATTAAAAGCATTTTGAGCATACTTTGCTAATCAACGATCATGGTCTACCGATGTATTAAAGTTGGATGATGGTGAGATTGAAGAGTTTACCATACAGTTTAATATGCTCTTTTGACCTATTCTCATGGCACTATTGACTGTATACACGGTCAACTCTCCTTTTTGCCAATTTTTTTACTCCTCCGTGGGAACTCTCATCCTTTAGCTCCCTTGGGGATTGAACCATGACCTTTAGAGTTGGAGGTGAGGGGTTCTTACTAAATGAGCAACTCTCTCCTGTCCCTTTTTGCCGACTTCAACTAATTCATAGTGACATAAGATTAACCAGCAATTGAATGAACGCCTACACGGTTATCATTCCACCCAAAAGATTGGAAATGTAGAGGATTCATATAGCCAACCTTAACTAGATTGGGGATTCAGGTGAAGTTGATAAATTGATGTTGTCATTTATGTTTTGCTCCGTGCTGAGTGTATTTACTGTTGACCTAACAGAAGCAACATAACAAAGACAACATTTCTGATTCCAATTTAATATTGTGTTTGAGTATACTTTATGGTAGTGGTGTGGATGAATTCCATTACTCACTGCATTTCCTTCCATCCAAAGCTTTCCCATTTCCCCCTCAGCCCGACAAAATTAGTTCAACCAATGAGAGACAGAGGGAGTATCTATGTGCTTAAAATATGACCTTTCACTTGATCAAGAGATGTTTATTCTACTTAAATTCAAAGCTTCAGATTCCATTTACTCTATGTAGTTTCAACTGTCTATTTCCAAAAAGGTTCACATTTGTATCTCTTGGTGGATGATATTAAAATGTAACATTATTCTTATTTGAAAATGGTAGAACATTGATGGCCTTCATCTTCGCTCTGGAATTCCAAGGGAGAAGCTTTCTGAATTACATGGGGATTCTTTTATGGAACGATGCCCTTCTTGTGGAATTGAGTAAGATTCCGTCTTTTTATGCAGCATGCTATCCTCTGCTACTATGCATGTTCCCACATTCATGTATATTCACTCAATTTTTTTTTATTGTATGTAGTTTTTCTGGTAACATTATGGTGATTGCTTATAAGTCTGTTTTTGTGAATTGATCCATGAAGGTATATGAGGGATTTTGAAATAGAAACTATTGGGTTGAAGGAAACTGCACGGCGTTGTTCCAAGGTGGGCTGTGGTGCAAGACTTAAAGACACAGTTCTTGACTGGGAGGTAACCATAAACAGCTTTTTGTTTAATAACAAAGTCCTAGGATGAAGGATCTGGGCTTCTCTTTATAGTTGCACAGTTACATTCCATGGCCCTTTAGTAGTGACAGTTAAAGATATAGACAGAAGTTTGACAGGTTGTACCCTAATGAGCATCCAATGATTAAGAAAAAGTTGTAATAGTTTCAATGTTTTTTTTTTCGTTATCTGCTACTTCGGCCAACGCATCAAAGATTTTTTATGGCTAAAATATGATTCCACGTATCACTCTGTTGTTGACCTCATCCATTCCCCTCCTGTTTTTCTCCTCAGGATGCTCTACCTCCAAAGGAGATGAATCCAGCTGAGAGACACTGCAAAATGGCTGATGTTGTGTTATGTCTAGGGACAAGGTAAAGCTAACTAACTATTTGACTACCTCTGTAATCTGGAATTCTGATGCATGATGCTAAATGAGTTCTTACAGTGTTTGTTGACTCTAAACTGTTAAACTATTTACTTCCGTCATTCTTTGCCCTTAATCATGTCAGGAGATAAAATTACTTGTTCTACTCTTGCAGTTTGCAGATCACCCCTGCCTGTAATTTGCCTCTAAAATCACTCAAAGGCGGTGGAAAGATTGTAATAGTTAATCTTCAGGTATATTATTCCTTGGGCCAAATGTAACATCAGCAAACACATTTCCCATATTTCCATTGACCCTAGTTTTGATGATAGAAATTGCATCAGAGCCTCATAATCAAACCCCCCCCCCCCAAAAAAAAAAAAATATTTTGCATTGCTTTGTCATTTAAGATTTATCTGTTTTTAGTGTACTGCCATGTTTTAATCAAAAACAACAAATATTACTTTCTGTTCTCAAATAATTGCAGTTATTTCTCAATCACTAAATCATTTAGGCAAAGCTATCATTTTCCTTGCAATGCACATATGGGACTCCTAGCTTATTAGTCTGCTGTACTTTGCCATGATAAATGATTCAGGCCATGCTTATCAGAGCCAAAAAATAAAAGGAGATAAAGGCTTTCAGTCTCTGTAGATGCTTAATTTTGAATTTTCTACTAGGTCAAATATAAGAGGATCTCTGAGGGAATTAGAAAGTAAAGCTTTAATTATCCCGAGGATGAAAATTTCACAAGTTTCATATCAAAATGTTAAAGATAGGTGAATATTTCTTGCTCATATATTGTGACCTTGGCAGTGACTCTACTTGAAAATATTCTCTGCCGATCATCGATGGAAAATTTGTTGGATTAATAGGAGTTCATCTGTTACTTAGCTCTTATATCCTCGTCCATTATTTTGCAGAAAACTCCCAAGGACAAGAAAGCAAGCCTACTGATTCATGGTCTTGTAGACAAG</genome_strand>
        <mrna_strand>CACTTCTTGGGGTATACCTGATTTTCGTGGTCCCAAGGGTATTTGGACTCTTCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTCCAAGCATGACACACATGGCCCTAGTGGAACTAGAGAAGGCGGGTTTTCTAAAGTTTCTTATAAGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTGATGGCCTTCATCTTCGCTCTGGAATTCCAAGGGAGAAGCTTTCTGAATTACATGGGGATTCTTTTATGGAACGATGCCCTTCTTGTGGAATTGA..............................................................................................................................................................GTATATGAAGGATTTTGAAATAGAAACTATTGGGTTGAAGGAAACTGCACGGAGTTGTTCCAAAGTGGGCTGTGGTGCAAGACTTAAAGACACAGTTCTTGACTGGGAG....................................................................................................................................................................................................................................................................................................................GATGCTCTACCTCCAAAGGAGATGAATGCACCTGAGAGACACTGCAAAATGGCTGATGTTGCGTTATGTCTAGGGACAAG........................................................................................................................................................................TTTGCAGATCACCCCTGCCTGTAATTAGCCTCTAAAATCACTCAGAGGCTGTGGAAAGATTGTAATAGTGAATCTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCCCAAGGACAAGAAAGCAAGCCTACTGATTCATGGTCTTGTAGACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269711" ref_strand="+" ref_description="SGN-E269711 [cLEM-17-M10]">
      <seq>tttgaagagtattcctctgcttctaattctttagtgatcaatcaatcttttttctcaaagagaaaattaaagaagaacagattgttcctgaagaacaaaggggaaaaaaatgtctctgggttatgctgaaaagctttcttttatagaagatgtgggcaatgttgggatgactgagtattttgacccacctctccttttgcaagacaaaattgagagacttgctgtgatgatacaaaagagtaagcatttagtggtgtttacaggagcaagaatatccacttcttgtggtatacctgattttcgtggtcccaaaggtatttggactcttcagagagaaaggaaagcgctaccagaagcatcattgccttttcatcgtgcaactccaagcatgacacacatggccctagtggaactaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="40495" stop="36677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40195" g_stop="39988" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39987" i_stop="38494" i_length="1494">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38493" g_stop="38464" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="238" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38463" i_stop="38373" i_length="91">
            <donor d_prob="0.725" d_score="0.00"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38372" g_stop="38280" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="331" r_length="93" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38279" i_stop="37063" i_length="1217">
            <donor d_prob="0.936" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="37062" g_stop="36977" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="417" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E269711" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269711" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40195" e_stop="39988"/>
          <exon e_start="38493" e_stop="38464"/>
          <exon e_start="38372" e_stop="38280"/>
          <exon e_start="37062" e_stop="36977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAGAGTATTCCTCTGCTTCTAATTCTTTAGTGATCAATCAATCTTTTTTCTCAAAGAGAAAATTAAAGAAGAACAGATTGTTCCTGAAGAACAAAGGGGAAAAAAATGTCTCTGGGTTATGCTGAAAAGCTTTCTTTTATAGAAGATGTGGGCAATGTTGGGATGACTGAGTATTTTGACCCACCTCTCCTTTTGCAAGACAAAGTGAGATTTTTTTCTCTTTTTTGGCACTTTTTTCTGCAACCCTTTACTCCTTTTGTGTTAATTGTTGTGATTTTTAACTTGTTTGAACATTTTATGTGACTGCAAATAGCCATAAAACTTGTTTAGGTTTTTGTGCTTGATTAAGAATGGAAATTTAGGAGCTGGGGGTCTTTTTGATTGCTTGGTAGTTTGCATTTAGGATTTTTCATGAGATCCAGAATTAATTCCCACATTGTTGAGCGTAACAGGACCCTGATAATCTCAATTTCATTAATCTAATTAGGGGTTGTTAAATCTCATGGGCAGTGGCAAAGTTAGGATTTTTACTATAGAAGGGGTTCGAAATATAAAAAGTAAATATCTGGAGAAGTCAAAGGAGGTTCAATGTCGACTATATATACGGAGAAATAATTTTAATCATGTATAAACGGTTTAGTTTTCTGTCAAAGGGGTTCGGATGAACCTCCTTGACTCTACCTGGGTCTGCGCCTGCTTAGGGGTGTAAACCATGAAGCATTGGGAGTTTTCTAGTTATTTTGTTCAAAAGCCTTTTGACAGTATCATGCATTGTGTTGGTCATGAGATAAATGTTATACATTGGACGATAAGTTCTTATGGTCCTTAGTCTTCTCGATTCAATTGATAATACACAATTTGCCATAAAAAATAGTATCAGTACAAGCACTTGGCAGTCCTGCACAGCGTCTTTGTCTCCACCACCAAATTTAGAGTTTTCATGTATCTTAGGGCTTCAATACTATATGGAATGAGGAATCCTTCTATTAGCAATATTATTGCAGCTTGTTGAATATCCATGCGAGTTATGCATTTGTGCTTTGATCATCGTTCCTTTTGCTATTGCATGTCTTCTATGTTAAGGTATTAAGGTCTTTCTCAAAAAAAATGTTAACTTAAGGTAGAATTAGTTAATCATTGATAAAAAAAGAAAAGGATTAGTAGGAAATCAGTATGAGTACCTAGATAGCACTCAAAAAACTTATGGTTGTTCATTTGGAATGGTATTTGGAATTTTGAAGTTCCAACCGCTGTAGAAAATATGGCTTCCAACTTTTCGTTATCTGTGGTCTAGGCAACAAAAATGATCTTAATTTTTCTGTCAGGTATATAACAATTGTTTAAATAGCATTCTGTGTCATCTTCACAATCTCCAAGTGTCCCATAGTGTTGTTTTGTCTTTGTTGGAATTCTAGGACCTAAATACATTCTCTTGTTGTCCTCACTTTAAAGTGAAATCTGATTGCTAATAAATAAAGGAGATAATTTTAAGTAGATATCGTTTGCTGAATATGTAGATTCTGGCTGTAATTTCTATCCATTGTGCTGTTTAAGATTTTCTGGAAAATCAGTACTTTCTGGTGCTGGAGGATCTTCCTTTTCCTTCAGCTGCTTGTCAAAGATCAGTTAAAAGGGGAAGAATCACTTTATTTTTCTGTGTTCTTACTAATGCTGATTTTTTAAACATAAACTTTGCAGATTGAGAGACTTGCTGTGATGATACAAAAGGTGACTCCTTTAGACAGTCTTTGTCTTAGCTAGGCCATGTATAGCTTTTCTCTTTAGAAGTAACCCATTCTAACTCTTGTTTCTTCTACAGAGTAAGCATTTAGTGGTGTTTACAGGAGCAGGAATATCCACTTCTTGTGGTATACCTGATTTTCGTGGTCCCAAGGGTATTTGGACTCTTCAGGTATTGTTGTAGTTATATCAGTGAATTGCAAGCCCCTCTTTCTAAAAGCACATTGCTTGACATGTTTCTACTGTTGATATCCATGTTAAAATGTTGATATTTGATAATTGAATGCTGCCCTTTCGACCTGATTCTAGCTTATTTGGTCAGCCATTATCTCCAATCCTTCTTTCTACCTGCAATGTCATCTTTTAGGCTGGATATTTGGGAGCTGAGAGGAGGATGTGTTGATCATCTAAAGGTGGTGCAGAGTTTTCTTTTTCTCCTTTGTGTATTTGATCTGGGAAAGTTATATAAATAAGTGGATGAACACTTTGCACAATAAAGTTGTTTGATAGATTCTATCACTTTGCTTGGTAATAATGACATGAATTAAGGAAGGTGGCCTGAAAGGAATGATCTATCTTACGATGGGGGGAGCTGTTTTCTCTTGTGCGAATATGTCAAATTTACTGACATGCATGATACACCAAAATTGTCTTTTTATGTGTTATTGTTTGTGTATAGTGTCTAGTTCTCTTATTTCATTTTTAATATTGTATTGACACTAATCTCTTTACTAAGTAGGAAGAAGCTATTAAATACACTATAGTTTATATGTGCATATGGATTGCACAAGCAGTTTTATTCTTTTCTATGTTGCTCTGGCCTCCAAAAATGATGTTGTACCCGTGTCAAATCCTTCAAAATGCATAGCATTTAGAGGATCCAACACACAACGAGCTGTATATTTGAAGTGTTCGAGTAACATAGATTTTTTTGATAACTGTGGTGTCCGGGATAGATTGTGAGCATCTCAACTATTCCACCGCGTGTTTGCTATCCCTACCACCACATGTATCGGTTAAATCTTCTCACCAAAGGCTTAGATGGATGGGAATAAACCACTAGTGTTCTGTTATCTTTGGGGGGATTTGAATCCTGGTTTCCAAGGTTTTCACTTACTTCATTGACTGCTAGTTACACCCTTAAGTGCACAAGCATTTGTATTATTATCATTCATTGAGATATGAACAGATAATTTCTATTATTCCTTAGGGCATTTGATGGACAACATTGCAGTAAAGTTGTCAGGATCAAGCAATGGTTATGATGTGAATGTCTTTATATAGTGGTGGAGCATTTTCCATGGATTAGAATAGTATAACAATTCTTTACCGCTAAAGAATTATGAGCCATATTTTATCTTCTTATCCCTTTTATTTAACTGATTGTAGAGAGAAGGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTCCAAGCATGACACACATGGCCCTAGTGGAACTAGA</genome_strand>
        <mrna_strand>TTTGAAGAGTATTCCTCTGCTTCTAATTCTTTAGTGATCAATCAATCTTTTTTCTCAAAGAGAAAATTAAAGAAGAACAGATTGTTCCTGAAGAACAAAGGGGAAAAAAATGTCTCTGGGTTATGCTGAAAAGCTTTCTTTTATAGAAGATGTGGGCAATGTTGGGATGACTGAGTATTTTGACCCACCTCTCCTTTTGCAAGACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAGACTTGCTGTGATGATACAAAAG...........................................................................................AGTAAGCATTTAGTGGTGTTTACAGGAGCAAGAATATCCACTTCTTGTGGTATACCTGATTTTCGTGGTCCCAAAGGTATTTGGACTCTTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAAGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTCCAAGCATGACACACATGGCCCTAGTGGAACTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322949" ref_strand="+" ref_description="SGN-E322949 [cTOB-30-M6]">
      <seq>gctttctttgaagagtattcctctgcttctaattctttagtgatcaatcaatcttttttctcaaagagaaaattaaagaagaacagattgttcctgaagaacaaaggggaaaaaatgtctctgggttatgctgaaaagctttcttttttanaagatgtgggcaatgttgggatgactgagtattttgacccacctctccttttgcaagacaaaattgagagacttgctgtgatgatacaaaagagtaagcattttagtggtgtttacaggagcaggaatatcccacttcttgtggtatacctgattttcgtggtcccaagggtatttggactcttcagagagaagggaaagcgctaccagaagcatcattgccttttcatcgtgcaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="40501" stop="36711"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40201" g_stop="39988" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39987" i_stop="38494" i_length="1494">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38493" g_stop="38464" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="243" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38463" i_stop="38373" i_length="91">
            <donor d_prob="0.725" d_score="0.00"/>
            <acceptor a_prob="0.912" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38372" g_stop="38280" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="338" r_length="95" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38279" i_stop="37063" i_length="1217">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="37062" g_stop="37011" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="390" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E322949" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40201" e_stop="39988"/>
          <exon e_start="38493" e_stop="38464"/>
          <exon e_start="38372" e_stop="38280"/>
          <exon e_start="37062" e_stop="37011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTCTTTGAAGAGTATTCCTCTGCTTCTAATTCTTTAGTGATCAATCAATCTTTTTTCTCAAAGAGAAAATTAAAGAAGAACAGATTGTTCCTGAAGAACAAAGGGGAAAAAAATGTCTCTGGGTTATGCTGAAAAGCTTTCTTTTATAGAAGATGTGGGCAATGTTGGGATGACTGAGTATTTTGACCCACCTCTCCTTTTGCAAGACAAAGTGAGATTTTTTTCTCTTTTTTGGCACTTTTTTCTGCAACCCTTTACTCCTTTTGTGTTAATTGTTGTGATTTTTAACTTGTTTGAACATTTTATGTGACTGCAAATAGCCATAAAACTTGTTTAGGTTTTTGTGCTTGATTAAGAATGGAAATTTAGGAGCTGGGGGTCTTTTTGATTGCTTGGTAGTTTGCATTTAGGATTTTTCATGAGATCCAGAATTAATTCCCACATTGTTGAGCGTAACAGGACCCTGATAATCTCAATTTCATTAATCTAATTAGGGGTTGTTAAATCTCATGGGCAGTGGCAAAGTTAGGATTTTTACTATAGAAGGGGTTCGAAATATAAAAAGTAAATATCTGGAGAAGTCAAAGGAGGTTCAATGTCGACTATATATACGGAGAAATAATTTTAATCATGTATAAACGGTTTAGTTTTCTGTCAAAGGGGTTCGGATGAACCTCCTTGACTCTACCTGGGTCTGCGCCTGCTTAGGGGTGTAAACCATGAAGCATTGGGAGTTTTCTAGTTATTTTGTTCAAAAGCCTTTTGACAGTATCATGCATTGTGTTGGTCATGAGATAAATGTTATACATTGGACGATAAGTTCTTATGGTCCTTAGTCTTCTCGATTCAATTGATAATACACAATTTGCCATAAAAAATAGTATCAGTACAAGCACTTGGCAGTCCTGCACAGCGTCTTTGTCTCCACCACCAAATTTAGAGTTTTCATGTATCTTAGGGCTTCAATACTATATGGAATGAGGAATCCTTCTATTAGCAATATTATTGCAGCTTGTTGAATATCCATGCGAGTTATGCATTTGTGCTTTGATCATCGTTCCTTTTGCTATTGCATGTCTTCTATGTTAAGGTATTAAGGTCTTTCTCAAAAAAAATGTTAACTTAAGGTAGAATTAGTTAATCATTGATAAAAAAAGAAAAGGATTAGTAGGAAATCAGTATGAGTACCTAGATAGCACTCAAAAAACTTATGGTTGTTCATTTGGAATGGTATTTGGAATTTTGAAGTTCCAACCGCTGTAGAAAATATGGCTTCCAACTTTTCGTTATCTGTGGTCTAGGCAACAAAAATGATCTTAATTTTTCTGTCAGGTATATAACAATTGTTTAAATAGCATTCTGTGTCATCTTCACAATCTCCAAGTGTCCCATAGTGTTGTTTTGTCTTTGTTGGAATTCTAGGACCTAAATACATTCTCTTGTTGTCCTCACTTTAAAGTGAAATCTGATTGCTAATAAATAAAGGAGATAATTTTAAGTAGATATCGTTTGCTGAATATGTAGATTCTGGCTGTAATTTCTATCCATTGTGCTGTTTAAGATTTTCTGGAAAATCAGTACTTTCTGGTGCTGGAGGATCTTCCTTTTCCTTCAGCTGCTTGTCAAAGATCAGTTAAAAGGGGAAGAATCACTTTATTTTTCTGTGTTCTTACTAATGCTGATTTTTTAAACATAAACTTTGCAGATTGAGAGACTTGCTGTGATGATACAAAAGGTGACTCCTTTAGACAGTCTTTGTCTTAGCTAGGCCATGTATAGCTTTTCTCTTTAGAAGTAACCCATTCTAACTCTTGTTTCTTCTACAGAGTAAGCA-TTTAGTGGTGTTTACAGGAGCAGGAATAT-CCACTTCTTGTGGTATACCTGATTTTCGTGGTCCCAAGGGTATTTGGACTCTTCAGGTATTGTTGTAGTTATATCAGTGAATTGCAAGCCCCTCTTTCTAAAAGCACATTGCTTGACATGTTTCTACTGTTGATATCCATGTTAAAATGTTGATATTTGATAATTGAATGCTGCCCTTTCGACCTGATTCTAGCTTATTTGGTCAGCCATTATCTCCAATCCTTCTTTCTACCTGCAATGTCATCTTTTAGGCTGGATATTTGGGAGCTGAGAGGAGGATGTGTTGATCATCTAAAGGTGGTGCAGAGTTTTCTTTTTCTCCTTTGTGTATTTGATCTGGGAAAGTTATATAAATAAGTGGATGAACACTTTGCACAATAAAGTTGTTTGATAGATTCTATCACTTTGCTTGGTAATAATGACATGAATTAAGGAAGGTGGCCTGAAAGGAATGATCTATCTTACGATGGGGGGAGCTGTTTTCTCTTGTGCGAATATGTCAAATTTACTGACATGCATGATACACCAAAATTGTCTTTTTATGTGTTATTGTTTGTGTATAGTGTCTAGTTCTCTTATTTCATTTTTAATATTGTATTGACACTAATCTCTTTACTAAGTAGGAAGAAGCTATTAAATACACTATAGTTTATATGTGCATATGGATTGCACAAGCAGTTTTATTCTTTTCTATGTTGCTCTGGCCTCCAAAAATGATGTTGTACCCGTGTCAAATCCTTCAAAATGCATAGCATTTAGAGGATCCAACACACAACGAGCTGTATATTTGAAGTGTTCGAGTAACATAGATTTTTTTGATAACTGTGGTGTCCGGGATAGATTGTGAGCATCTCAACTATTCCACCGCGTGTTTGCTATCCCTACCACCACATGTATCGGTTAAATCTTCTCACCAAAGGCTTAGATGGATGGGAATAAACCACTAGTGTTCTGTTATCTTTGGGGGGATTTGAATCCTGGTTTCCAAGGTTTTCACTTACTTCATTGACTGCTAGTTACACCCTTAAGTGCACAAGCATTTGTATTATTATCATTCATTGAGATATGAACAGATAATTTCTATTATTCCTTAGGGCATTTGATGGACAACATTGCAGTAAAGTTGTCAGGATCAAGCAATGGTTATGATGTGAATGTCTTTATATAGTGGTGGAGCATTTTCCATGGATTAGAATAGTATAACAATTCTTTACCGCTAAAGAATTATGAGCCATATTTTATCTTCTTATCCCTTTTATTTAACTGATTGTAGAGAGAAGGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTC</genome_strand>
        <mrna_strand>GCTTTCTTTGAAGAGTATTCCTCTGCTTCTAATTCTTTAGTGATCAATCAATCTTTTTTCTCAAAGAGAAAATTAAAGAAGAACAGATTGTTCCTGAAGAACAAAGGGG-AAAAAATGTCTCTGGGTTATGCTGAAAAGCTTTCTTTTTTANAAGATGTGGGCAATGTTGGGATGACTGAGTATTTTGACCCACCTCTCCTTTTGCAAGACAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAGACTTGCTGTGATGATACAAAAG...........................................................................................AGTAAGCATTTTAGTGGTGTTTACAGGAGCAGGAATATCCCACTTCTTGTGGTATACCTGATTTTCGTGGTCCCAAGGGTATTTGGACTCTTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAGGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745990" ref_strand="+" ref_description="SGN-E745990 [GI|47105412]">
      <seq>gagtcacttgagatctcacttgccccaataacaactccttgaatttcacacagtcaccggagttcttctttctcttacaacaccgacatgcagcttccgtcgtcggccaccgtggctgcggtggttctctccgtagtcctttttatttgtgccactgaagctcataacattactcacattctagccgaccataaacagttctccactttcaaccattacttaacaactacacacctcgccgctgaaattaaccgccggcaaaccatcactgtttgtgctgtagataatgccggaatgtcagatctactctccaaacaactatctatctacactataaaaaacgttctctcttttcacgtgcttctcgattacttcgacgctaaaaagcttcaccagattactaacggcacggcacttgccgccacaatgtttcaagctaccggctcagctaccggatcttctggattcgtaaacattactgatctaagaggaggtaaagtcgggctcagtccggctgattacaacggtcctcctccggctaaatttgtaaaatcaatcgccgagattccttacaacatctccgttattcaaataagtacgattttaccctcagacgaagctgaagctccgactccaggaccaagccaaatgaatctcacttctctaatgtcagctaaaggctgcaaagttttcgccgagactctattagcttctccggctgaaaaaacgtttgaggataacgttgatggcggagtaacaatattttgtccacgagatgatgcaatgaagaaatttttgcctaaatttaagaatttaacagcggaagggaagcaatcactgctcgaatatcatggaattcctatataccaatcgatttcgaatttgaaatcgaataatggagatatgaacactttagctactgacggagctaagaagtacgctgtagtcattcaaaatgacggtgaagatgttactataaaaacgaaaattgtgacggcgaagatcacggctactgtggttgataaactgccattagcgatttactcgcttgataaggtgttattacccgaggaattgttcaaggctagtcctactccggcgccggcgccggcaccggaggcacgtgctgaatctcctaagcactccaagtcaccaccggcacctgcatctccggctgagtctccagcggattctccggcggatggtcccaacggtgatgctgatgatttgacagatagcggtgctgttaagtacaatgccggagcatcacttgccgccgttttcagtttatggtttgccttcaacgtgttgatggaagtttgaaaaagaatttcatcaaattaaagttagttactgtattattagtctatttctcagtttttagatttacttctttgattctatttggaattttcattaatgtaatatgaatcattattgacttttcaaccattaattattatatgaaaaattacgcgattgagtagatttatcctcggcaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="46403" stop="44300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46104" g_stop="44601" g_length="1504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1504" r_length="1504" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1505" polyA_stop="1520"/>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E745990" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1504</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46104" e_stop="44601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTCACTTGAGATCTCACTTGCCCCAATAACAACTCCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAAAGAATTTCATCAAATTAAAGTTAGTTACTGTATTATTAGTCTATTTCTCAGTTTTTAGATTTACTTCTTTGATTCTATTTGGAATTTTCATTAATGTAATATGAATCATTATTGACTTTTCAACCATTAATTATTATATGAAAAATTACGCGATTGAGTAGATTTATCCTCGGCATAA</genome_strand>
        <mrna_strand>GAGTCACTTGAGATCTCACTTGCCCCAATAACAACTCCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAAAGAATTTCATCAAATTAAAGTTAGTTACTGTATTATTAGTCTATTTCTCAGTTTTTAGATTTACTTCTTTGATTCTATTTGGAATTTTCATTAATGTAATATGAATCATTATTGACTTTTCAACCATTAATTATTATATGAAAAATTACGCGATTGAGTAGATTTATCCTCGGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713376" ref_strand="+" ref_description="SGN-E713376 [FB08BH04]">
      <seq>ttagcttctccggctgaaaaaacgtttgaggataacgttgatggcggagtaacaatattttgtccacgagatgatgcaatgaagaaatttttgcctaaatttaagaatttaacagcggaagggaagcaatcactgctcgaatatcatggaattcctatataccaatcgatttcgaatttgaaatcgaataatggagatatgaacactttagctactgacggagctaagaagtacgctgtagtcattcaaaatgacggtgaagatgttactataaaaacgaaaattgtgacggcgaagatcacggctactgtggttgataaactgccattagcgatttactcgcttgataaggtgttattacccgaggaattgttcaaggctagtcctactccggcgccggcgccggcaccggaggcacgtgctgaatctcctaagcactccaagtcaccaccggcacctgcatctccggctgagtctccagcggattctccggcggatggtcccaacggtgatgctgatgatttgacagatagcggtgctgttaagtacaatgccggagcatcacttgccgccgttttcagtttatggtttgccttcaacgtgttgatggaagtttgaaaaagaatttcatcaaattaaagttagttactgtattattagtctatttctcagtttttagatttacttctttgattctatttggaattttcattaatgtaatatgaatcattattgacttttcaaccattaattattatatgaaaaattacgcgattgagtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="45699" stop="44317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45399" g_stop="44622" g_length="778"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="778" r_length="778" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="781" polyA_stop="791"/>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E713376" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713376" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45399" e_stop="44622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAAAGAATTTCATCAAATTAAAGTTAGTTACTGTATTATTAGTCTATTTCTCAGTTTTTAGATTTACTTCTTTGATTCTATTTGGAATTTTCATTAATGTAATATGAATCATTATTGACTTTTCAACCATTAATTATTATATGAAAAATTACGCGATTGA</genome_strand>
        <mrna_strand>TTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAAAGAATTTCATCAAATTAAAGTTAGTTACTGTATTATTAGTCTATTTCTCAGTTTTTAGATTTACTTCTTTGATTCTATTTGGAATTTTCATTAATGTAATATGAATCATTATTGACTTTTCAACCATTAATTATTATATGAAAAATTACGCGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709900" ref_strand="+" ref_description="SGN-E709900 [FA53CD06]">
      <seq>ccgaatttgtaaaatcaatcgccgagattccttacaacatctccgttattcaaataagtacgattttaccctcagacgaagctgaagctccgactccaggaccaagccaaatgaatctcacttctctaatgtcagctaaaggctgcaaagttttcgccgagactctattagcttctccggctgaaaaaacgtttgaggataacgttgatggcggagtaacaatattttgtccacgagatgatgcaatgaagaaatttttgcctaaatttaagaatttaacagcggaagggaagcaatcactgctcgaatatcatggaattcctatataccaatcgatttcgaatttgaaatcgaataatggagatatgaacactttagctactgacggagctaagaagtacgctgtagtcattcaaaatgacggtgaagatgttactataaaaacgaaaattgtgacggcgaagatcacggctactgtggttgataaactgccattagcgatttactcgcttgataaggtgttattacccgaggaattgttcaaggctagtcctactccggcgccggcgccggcaccggaggcacgtgctgaatctcctaagcactccaagtcaccaccggcacctgcatctccggctgagtctccagcggattctccggcggatggtcccaacggtgatgctgatgatttgacagatagcggtgctgttaagtacaatgccggagcatcacttgccgccgttttcagtttatggtttgccttcaacgtgttgatggaagtttgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="45863" stop="44479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45566" g_stop="44779" g_length="788"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="788" r_length="788" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E709900" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45566" e_stop="44779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAA</genome_strand>
        <mrna_strand>CCGAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707910" ref_strand="+" ref_description="SGN-E707910 [FA34BC04]">
      <seq>ctctgatctactctccaaacaactatctatctacactataaaaaacgttctctcttttcacgtgcttctcgattacttcgacgctaaaaagcttcaccagattactaacggcacggcacttgccgccacaatgtttcaagctaccggctcagctaccggatcttctggattcgtaaacattactgatctaagaggaggtaaagtcgggctcagtccggctgattacaacggtcctcctccggctaaatttgtaaaatcaatcgccgagattccttacaacatctccgttattcaaataagtacgattttaccctcagacgaagctgaagctccgactccaggaccaagccaaatgaatctcacttctctaatgtcagctaaaggctgcaaagttttcgccgagactctattagcttctccggctgaaaaaacgtttgaggataacgttgatggcggagtaacaatattttgtccacgagatgatgcaatgaagaaatttttgcctaaatttaagaatttaacagcggaagggaagcaatcactgctcgaatatcatggaattcctatataccaatcgatttcgaatttgaaatcgaataatggagatatgaacactttagctactgacggagctaagaagtacgctgtagtcattcaaaatgacggtgaagatgttactataaaaacgaaaattgtgacggcgaagatcacggctactgtggttgataaactgccattagcgatttactcgcttgataaggtgttattacccgaggaattgttcaaggctagtcctactccggcgccggcgccggcaccggaggcacgtgctgaatctcctaagcactccaagtcaccaccggcacctgcatctccggctgagtctccagcggaatctccggcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="46107" stop="44604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45808" g_stop="44904" g_length="905"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="905" r_length="905" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E707910" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>905</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45808" e_stop="44904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGG</genome_strand>
        <mrna_strand>CTCTGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGAATCTCCGGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710286" ref_strand="+" ref_description="SGN-E710286 [FA54DH06]">
      <seq>cgcataaacagttctccactttcaaccattacttaacaactacacacctcgccgctgaaattaaccgccggcaaaccatcactgtttgtgctgtagataatgccggaatgtcagatctactctccaaacaactatctatctacactataaaaaacgttctctcttttcacgtgcttctcgattacttcgacgctaaaaagcttcaccagattactaacggcacggcacttgccgccacaatgtttcaagctaccggctcagctaccggatcttctggattcgtaaacattactgatctaagaggaggtaaagtcgggctcagtccggctgattacaacggtcctcctccggctaaatttgtaaaatcaatcgccgagattccttacaacatctccgttattcaaataagtacgattttaccctcagacgaagctgaagctccgactccaggaccaagccaaatgaatctcacttctctaatgtcagctaaaggctgcaaagttttcgccgagactctattagcttctccggctgaaaaaacgtttgaggataacgttgatggcggagtaacaatattttgtccacgagatgatgcaatgaagaaatttttgcctaaatttaagaatttaacagcggaagggaagcaatccctgctcgaatatcatggaattcctatataccactcgatttcgaatttgaaatcgaataatggagatatgaaccctttagctactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="46215" stop="44882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45917" g_stop="45182" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E710286" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710286" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45917" e_stop="45182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGA</genome_strand>
        <mrna_strand>CGCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCCCTGCTCGAATATCATGGAATTCCTATATACCACTCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACCCTTTAGCTACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710814" ref_strand="+" ref_description="SGN-E710814 [FA56DC09]">
      <seq>cgcttgaatttcacacagtcaccggagttcttctttctcttacaacaccgacatgcagcttccgtcgtcggccaccgtggctgcggcggttctctccgtactcctttttatttgtgccactgaagctcataacattactcacattctagccgaccataaacagttctccactttcaaccattacttaacaactacacacctcgccgctgaaattaaccgccggcaaaccatcactgtttgtgctgtacataatgccggaatgtcacatctactctccaaacaactatctatctacactataaaaaacgttctctcttttcacgtgcttctcgattacttcgacgctaaaaagcttcaccagattactaacggcacggcacttgcccccccaatgtttcaagctaccggctcagctaccggatcttctggattcgtaaccattactgatctcagaggaggtaaagtcgggctcagtccggctgattacaacggtcctcctccggctacatttgcaaaatccatcgccgagattccttaccacatctccgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="46367" stop="45222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46069" g_stop="45521" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E710814" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46069" e_stop="45521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGT</genome_strand>
        <mrna_strand>CGCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGCGGTTCTCTCCGTACTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTACATAATGCCGGAATGTCACATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCCCCCCAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAACCATTACTGATCTCAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTACATTTGCAAAATCCATCGCCGAGATTCCTTACCACATCTCCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318407" ref_strand="+" ref_description="SGN-E318407 [cTOB-10-E5]">
      <seq>atgtgtaaaaatacattattgtataaggttcgtacctgaacaataaatttgcagtcacttgagatctcacttgccccaataacaactccttgaatttcacacagtcaccggagttcttctttctcttacaacaccgacatgcagcttccgtcgtcggccaccgtggctgcggtggttctctccgtagtcctttttatttgtgccactgaagctcataacattactcacattctagccgaccataaacagttctccactttcaaccattacttaacaactacacacctcgccgctgaaattaaccgccggcaaaccatcactgtttgtgctgtagataatgccggaatgtcagatctactctccaaacaactatctatctacactataaaaaacgttctctcttttcacgtgcttctcgattacttcgacgctaaaaagcttcaccagattactaacggcacggcacttgccgccacaatgtttcaagctaccggctcagctaccggatcttctggattcgtaaacattactgatctaagaagaggtaaagtcgggctcagtccggctgattacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="46455" stop="45281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46155" g_stop="45581" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E318407" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46155" e_stop="45581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTGTAAAAATACATTATTGTATAAGGTTCGTACCTGAACAATAAATTTGCAGTCACTTGAGATCTCACTTGCCCCAATAACAACTCCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAA</genome_strand>
        <mrna_strand>ATGTGTAAAAATACATTATTGTATAAGGTTCGTACCTGAACAATAAATTTGCAGTCACTTGAGATCTCACTTGCCCCAATAACAACTCCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAAGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E609574" ref_strand="+" ref_description="SGN-E609574 [25585]">
      <seq>ccgaaagcagcttctccagtaaccagcatctcaccagcactcactccgtcaatcagtagatctgctccggtgccatctgtggcaacttctccgccggtatcaactccggtgagcactccggcgtcttccccggcagcagcggaggttccgtccagcactgagacaccgtcagtatccccaagcattccttcaagttcagcaagtccggcttagtctgttaacggacctactacggcgccggcgaatttatcaccgggaacttcaccagcaccagttgctgatgatgtttccgctgcaatttcagtattcaaggtgccggtggttctaagtgggcttgctatttgggccgcactttcaatttgaatgcatcccgtccaatattgcacaaaattcctattattgagtcttttatcacatttattgtagtttttttgacacttttattcattcaatgtctttatttttgtattttaatttattgattatcatttataataaataattgcagtggaattttaaattccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="50163" stop="49061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49863" g_stop="49363" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="501" r_length="501" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="525" polyA_stop="534"/>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E609574" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E609574" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49863" e_stop="49363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAAAGCAGCTTCTCCAGTAACCAGCGTTTCACCCGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTTCCTTCTGTTGCAACTCCTCCGCCGGTATCAACGCCGGTGAGCACTCCGGCATCTTCCCCGGCAGCAGCGGATGTTCCGGCCAGCACTGCGACACCGTCAGTATCCCCAAGCATACCTTCAAGTTCAGCAAGTCCGGCGGAGTCTGTTGACGGACCTACTACGGCGCCGGCGAGTTTATCACCGGGAACTTCACCAGCACCCGTTGCTGATGATGTTTCCGCTGCAATTTCAGTGTTGAAAGTGCCGATGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCGGCCCAATGTTGCACAAAATTCCTATTATCGAGTCTTTTATCATATTTATTGTAATATTTTTGACACTTTTATTCATTCATTATCTTATTTGTTGTACTTTAATTTACTGATTATCATTTATAACAAATA</genome_strand>
        <mrna_strand>CCGAAAGCAGCTTCTCCAGTAACCAGCATCTCACCAGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTGCCATCTGTGGCAACTTCTCCGCCGGTATCAACTCCGGTGAGCACTCCGGCGTCTTCCCCGGCAGCAGCGGAGGTTCCGTCCAGCACTGAGACACCGTCAGTATCCCCAAGCATTCCTTCAAGTTCAGCAAGTCCGGCTTAGTCTGTTAACGGACCTACTACGGCGCCGGCGAATTTATCACCGGGAACTTCACCAGCACCAGTTGCTGATGATGTTTCCGCTGCAATTTCAGTATTCAAGGTGCCGGTGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCCGTCCAATATTGCACAAAATTCCTATTATTGAGTCTTTTATCACATTTATTGTAGTTTTTTTGACACTTTTATTCATTCAATGTCTTTATTTTTGTATTTTAATTTATTGATTATCATTTATAATAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590388" ref_strand="+" ref_description="SGN-E590388 [43982]">
      <seq>gttagcccgtctgctgcgccggtacagtcaccgaaagcagcttctccagtaaccagcgatttcaccagcactcactccgtcaatcagtagatctgctccggttccttctgttgcaactcctccgccagtatcaactccggtgaacactccggcgtcttccccgaccgcagcagatgttccgtccagtactgagacaccgtcagtatccccaagcattccttcaagttcagcaagtccggcagaatctgttaacggaccaactacggcgccggcgagtttatcaccgggaacttcaccagcaccagttgctgatgatgtttccgctgcaatttcagtattcaaggtgccggtggttctaagtgggcttgctatttgggccgcactttcaatttgaatgcatccggcccaatattgcataaaattcctattgttaagtcttttattacatttattgtaattttttttgacacttttattcattcaatgtcatttataataaataattgcagtgaaatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="50192" stop="49042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49893" g_stop="49414" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E590388" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49893" e_stop="49414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAGCCCGTCTGCAGCGCCGGTACAGTCACCGAAAGCAGCTTCTCCAGTAACCAGCG-TTTCACCCGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTTCCTTCTGTTGCAACTCCTCCGCCGGTATCAACGCCGGTGAGCACTCCGGCATCTTCCCCGGCAGCAGCGGATGTTCCGGCCAGCACTGCGACACCGTCAGTATCCCCAAGCATACCTTCAAGTTCAGCAAGTCCGGCGGAGTCTGTTGACGGACCTACTACGGCGCCGGCGAGTTTATCACCGGGAACTTCACCAGCACCCGTTGCTGATGATGTTTCCGCTGCAATTTCAGTGTTGAAAGTGCCGATGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCGGCCCAATGTTGCACAAAATTCCTATTATCGAGTCTTTTATCATATTTATTGTAA-TATTTTTGACACTTTTATTCATTC</genome_strand>
        <mrna_strand>GTTAGCCCGTCTGCTGCGCCGGTACAGTCACCGAAAGCAGCTTCTCCAGTAACCAGCGATTTCACCAGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTTCCTTCTGTTGCAACTCCTCCGCCAGTATCAACTCCGGTGAACACTCCGGCGTCTTCCCCGACCGCAGCAGATGTTCCGTCCAGTACTGAGACACCGTCAGTATCCCCAAGCATTCCTTCAAGTTCAGCAAGTCCGGCAGAATCTGTTAACGGACCAACTACGGCGCCGGCGAGTTTATCACCGGGAACTTCACCAGCACCAGTTGCTGATGATGTTTCCGCTGCAATTTCAGTATTCAAGGTGCCGGTGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCGGCCCAATATTGCATAAAATTCCTATTGTTAAGTCTTTTATTACATTTATTGTAATTTTTTTTGACACTTTTATTCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343415" ref_strand="+" ref_description="SGN-E343415 [cTOF-19-O20]">
      <seq>ttgaatattgttttccggccaccggaatattctattctttctcaatttcaccggaatattctgctctttctcattttcttagcactgcaatatgtctaaattatttggcactgttgttgtactttttctcgtgttaaattccggtgaagcgcaaaatgcaccttctcaatccccaatttcttctccctctaaatcaccggcggtaaaatcacaagcaccggtttcttccccgactaaatcaccggcagtgagatctcaagcaccggtttcttcgccctcggctcctacgattagcccgtctgcagcgccggtacagtcaccgaaagcagcttctccagtaaccagcgtttcacccgcactcactccgtcaatcagtagatctgctccggttccttctgttgcaactcctccgccggtatcaacgccggtgagcactccggcatcttccccggcagcagcggatgttccggccagcactgcgacaccgtcagtatccccaagcataccttcaagttcagcaagtccggcggagtctgttgacggacctactacggcgccggcgagtttatcaccgggaacttcaccagcacccgttgctgatgatgtttccgctgcaatttcagtgttgaaagtgccgatggttctaagtgggcttgctatttgggccgcactttcaatttgaatgcatccggcccaatgttgcacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="-" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="50482" stop="49175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50182" g_stop="49475" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="708" r_length="708" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="-" ref_id="SGN-E343415" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50182" e_stop="49475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAATATTGTTTTCCGGCCACCGGAATATTCTATTCTTTCTCAATTTCACCGGAATATTCTGCTCTTTCTCATTTTCTTAGCACTGCAATATGTCTAAATTATTTGGCACTGTTGTTGTACTTTTTCTCGTGTTAAATTCCGGTGAAGCGCAAAATGCACCTTCTCAATCCCCAATTTCTTCTCCCTCTAAATCACCGGCGGTAAAATCACAAGCACCGGTTTCTTCCCCGACTAAATCACCGGCAGTGAGATCTCAAGCACCGGTTTCTTCGCCCTCGGCTCCTACGATTAGCCCGTCTGCAGCGCCGGTACAGTCACCGAAAGCAGCTTCTCCAGTAACCAGCGTTTCACCCGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTTCCTTCTGTTGCAACTCCTCCGCCGGTATCAACGCCGGTGAGCACTCCGGCATCTTCCCCGGCAGCAGCGGATGTTCCGGCCAGCACTGCGACACCGTCAGTATCCCCAAGCATACCTTCAAGTTCAGCAAGTCCGGCGGAGTCTGTTGACGGACCTACTACGGCGCCGGCGAGTTTATCACCGGGAACTTCACCAGCACCCGTTGCTGATGATGTTTCCGCTGCAATTTCAGTGTTGAAAGTGCCGATGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCGGCCCAATGTTGCACAAA</genome_strand>
        <mrna_strand>TTGAATATTGTTTTCCGGCCACCGGAATATTCTATTCTTTCTCAATTTCACCGGAATATTCTGCTCTTTCTCATTTTCTTAGCACTGCAATATGTCTAAATTATTTGGCACTGTTGTTGTACTTTTTCTCGTGTTAAATTCCGGTGAAGCGCAAAATGCACCTTCTCAATCCCCAATTTCTTCTCCCTCTAAATCACCGGCGGTAAAATCACAAGCACCGGTTTCTTCCCCGACTAAATCACCGGCAGTGAGATCTCAAGCACCGGTTTCTTCGCCCTCGGCTCCTACGATTAGCCCGTCTGCAGCGCCGGTACAGTCACCGAAAGCAGCTTCTCCAGTAACCAGCGTTTCACCCGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTTCCTTCTGTTGCAACTCCTCCGCCGGTATCAACGCCGGTGAGCACTCCGGCATCTTCCCCGGCAGCAGCGGATGTTCCGGCCAGCACTGCGACACCGTCAGTATCCCCAAGCATACCTTCAAGTTCAGCAAGTCCGGCGGAGTCTGTTGACGGACCTACTACGGCGCCGGCGAGTTTATCACCGGGAACTTCACCAGCACCCGTTGCTGATGATGTTTCCGCTGCAATTTCAGTGTTGAAAGTGCCGATGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCGGCCCAATGTTGCACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451843" ref_strand="+" ref_description="SGN-E451843 [cSTS-14-K8]">
      <seq>gttccgcctcaggtgactggctcaaccgcctcatgctggtggtgttgcagtagctgctggaaatttgggtaatgttggaaatatggggaatgataatttgattaggcaaggaggggttaatatgaacggggcgggtaatattgttgctggagttggggtcgctagtggtggaggaggaggtggtggtggcggtggtgcgacaattctttttgttggtgatctgcattggtggaccacagatgctgagctggaaactgagttgagcaagtatggacacgtgaaggaggtgaaattttttgaagaaaaagctagtgggaagtctaaaggatattgccaggttgagtttcatgattcctcagctgccacagcttgcaaggaaagtatgaatggacacatgttcaatgggcggccatgtgtgggtgcctttgcatcatcaccgtataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="59843" stop="60878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60135" g_stop="60578" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="445" r_length="445" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E451843" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E451843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60135" e_stop="60578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCAAATCAGGTGA-TGGCTCAACAGCCTCATGGTGGTGGTGTTGCAGTAGCTGCTGGAAATCTGGGTAATGTTGGAAATATGGGGAATGATAATTTGATAAGGCAAGGAGGGGTTAATATGAACGGGGCGGGTAATATTGTTGCTGGAGTTGGGGTCGCTAGTGGTGGAGGAGGAGGTGGTGGCGGCGGTGGTGCGACAATTCTTTTTGTTGGTGATTTGCATTGGTGGACCACAGATGCTGAGCTGGAAGCTGAGCTGAGCAAGTATGGACACGTGAAGGAGGTGAAATTTTTTGAAGAAAAAGCTAGTGGGAAGTCTAAAGGATATTGCCAGGTTGAGTTTCATGATTCCTCAGCTGCCACAGCTTGCAAGGAAAGTATGAATGGACATATGTTCAATGGGCGACCATGTGTAGTCGCTTATGCATCATCACCGTATAAT</genome_strand>
        <mrna_strand>GTTCCGCCTCAGGTGACTGGCTCAACCGCCTCATGCTGGTGGTGTTGCAGTAGCTGCTGGAAATTTGGGTAATGTTGGAAATATGGGGAATGATAATTTGATTAGGCAAGGAGGGGTTAATATGAACGGGGCGGGTAATATTGTTGCTGGAGTTGGGGTCGCTAGTGGTGGAGGAGGAGGTGGTGGTGGCGGTGGTGCGACAATTCTTTTTGTTGGTGATCTGCATTGGTGGACCACAGATGCTGAGCTGGAAACTGAGTTGAGCAAGTATGGACACGTGAAGGAGGTGAAATTTTTTGAAGAAAAAGCTAGTGGGAAGTCTAAAGGATATTGCCAGGTTGAGTTTCATGATTCCTCAGCTGCCACAGCTTGCAAGGAAAGTATGAATGGACACATGTTCAATGGGCGGCCATGTGTGGGTGCCTTTGCATCATCACCGTATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332369" ref_strand="+" ref_description="SGN-E332369 [cTOD-17-C21]">
      <seq>gaagctgagctgagcaagtatggacacgtgaaggaggtgaaattttttgacgaaaaagctagtgggaagtctaaaggatattgccaggttgagtttcatgattcctcagctgccacagcttgcaaggaaagtatgaatggacatatgttcaatgggcgaccatgtgtagtcgcttatgcatcatcaccgtataatgtgaagaggatgggtgaggctcaggtgaatcgaaatcagcaggtggctcaaactgctgttccccaagcaaggcgggggcctggtgaagctgctggtaaaattggaaataacaacactcctactggtggcaattatcaaggcggcggtggtggtggggatggcaacagggggggttatggtagaggcagttggggtagaggaggtcctcaagctatgggaaatcgggggcctgtaggtcctatgagaaacaggcctggtgggattgcaggtaggggtatgatgggtaacggtggaggtggatttggacaaggtatgggtggtgcacctcctattatgcatcctcaaacaatgatgggtcaaggctttgatcctgcttttggagggcctatggggagaatgggtggttatggaggatttcctggtggtccagctccaccatttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60084" stop="61321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60384" g_stop="61021" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E332369" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60384" e_stop="61021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTGAGCTGAGCAAGTATGGACACGTGAAGGAGGTGAAATTTTTTGAAGAAAAAGCTAGTGGGAAGTCTAAAGGATATTGCCAGGTTGAGTTTCATGATTCCTCAGCTGCCACAGCTTGCAAGGAAAGTATGAATGGACATATGTTCAATGGGCGACCATGTGTAGTCGCTTATGCATCATCACCGTATAATGTGAAGAGGATGGGTGAGGCTCAGGTGAATCGAAATCAGCAGGTGGCTCAAACTGCTGTTCCCCAAGCAAGGCGGGGGCCTGGTGAAGCTGCTGGTAAAATTGGAAATAACAACACTCCTACTGGTGGCAATTATCAAGGCGGCGGTGGTGGTGGGGATGGCAACAGGGGGGGTTATGGTAGAGGCAGTTGGGGTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTAGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGTAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCC</genome_strand>
        <mrna_strand>GAAGCTGAGCTGAGCAAGTATGGACACGTGAAGGAGGTGAAATTTTTTGACGAAAAAGCTAGTGGGAAGTCTAAAGGATATTGCCAGGTTGAGTTTCATGATTCCTCAGCTGCCACAGCTTGCAAGGAAAGTATGAATGGACATATGTTCAATGGGCGACCATGTGTAGTCGCTTATGCATCATCACCGTATAATGTGAAGAGGATGGGTGAGGCTCAGGTGAATCGAAATCAGCAGGTGGCTCAAACTGCTGTTCCCCAAGCAAGGCGGGGGCCTGGTGAAGCTGCTGGTAAAATTGGAAATAACAACACTCCTACTGGTGGCAATTATCAAGGCGGCGGTGGTGGTGGGGATGGCAACAGGGGGGGTTATGGTAGAGGCAGTTGGGGTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTAGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGTAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E440670" ref_strand="+" ref_description="SGN-E440670 [cSTA-18-C21]">
      <seq>atggacacatgttcaatgggcggccatgtgtggtcgcctttgcatcatcaccgtataatgtgaagaggatgggtgaggctcaggtgaatcgaaatcagcaggtggctcaaactgctgttccccaagcaaggcgggggcctggtgaagctgctggtaaaattggaaataacaacactcctactggtggcaattatcaaggtggtggtggtggtggggatggcaacagggggggttatggtagaggaagttggggtagaggaggtcctcaagctatgggaaatcgggggcctgtgggtcctatgagaaacaggcctggtgggattgcaggaaggggtatgatgggtaacggtggaggtggatttggaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60220" stop="61186"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60520" g_stop="60886" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E440670" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E440670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60520" e_stop="60886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGACATATGTTCAATGGGCGACCATGTGTAGTCGCTTATGCATCATCACCGTATAATGTGAAGAGGATGGGTGAGGCTCAGGTGAATCGAAATCAGCAGGTGGCTCAAACTGCTGTTCCCCAAGCAAGGCGGGGGCCTGGTGAAGCTGCTGGTAAAATTGGAAATAACAACACTCCTACTGGTGGCAATTATCAAGGCGGCGGTGGTGGTGGGGATGGCAACAGGGGGGGTTATGGTAGAGGCAGTTGGGGTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTAGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGTAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACA</genome_strand>
        <mrna_strand>ATGGACACATGTTCAATGGGCGGCCATGTGTGGTCGCCTTTGCATCATCACCGTATAATGTGAAGAGGATGGGTGAGGCTCAGGTGAATCGAAATCAGCAGGTGGCTCAAACTGCTGTTCCCCAAGCAAGGCGGGGGCCTGGTGAAGCTGCTGGTAAAATTGGAAATAACAACACTCCTACTGGTGGCAATTATCAAGGTGGTGGTGGTGGTGGGGATGGCAACAGGGGGGGTTATGGTAGAGGAAGTTGGGGTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTGGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGAAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449939" ref_strand="+" ref_description="SGN-E449939 [cSTS-7-N22]">
      <seq>gtagaggaggtcctcaagctatgggaaatcgggggcctgtgggtcctatgagaaacaggcctggtgggattgcaggaaggggtatgatgggtaacggtggaggtggatttggacaaggtatgggtggtgcacctcctattatgcatcatcaaacaatgatgggtcaaggctttgatcctgcttttggagggcctatggggagaatgggtggttatggaggatttcctggtggtccagctccaccatttcctggtatgttgtcatcttttccacctgttggaggagttgggatgcctggagtagctccgcatgtaaatcctgcattctttggtagaggaatgccaatgaatggtatgggaatgatgccaggcgctggtatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcatggtggtagagcaggagagtcaagttatgcagaagaagctggttctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagatagaggatcagagcgtgattggtctggttctacagagagaaaacatcgagaaggcagagaaccttnctatgatagagacatggctcgtgaaaaggatcgggggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60472" stop="61731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60772" g_stop="61431" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E449939" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E449939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60772" e_stop="61431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTAGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGTAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACG</genome_strand>
        <mrna_strand>GTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTGGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGAAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCATCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCATGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGTTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGATAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGAGAGAAAACATCGAGAAGGCAGAGAACCTTNCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483333" ref_strand="+" ref_description="SGN-E483333 [cSTE-8-P18]">
      <seq>gcaggaaggggtatgatgggtaacggtggaggtggatttggacaaggtatgggtggtgcacctcctattatgcatcctcaaacaatgatgggtcaaggctttgatcctgcttttggagggcctatggggagaatgggtggttatggaggatttcctggtggtccagctccaccatttcctggtatgttgtcatcttttccacctgttggaggagttgggatgcctggagtagctccacatgtaaatcctgctttctttggtagaggaatgccaatgaatggtatgggaatgatgccaggcgctggtatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcatggtggtagagcaggagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagatagaggatcagagcgtgattggtctggttctacagagagaaaacatcgagaaggcagagaaccttcctatgatagagacatggctcgtgaaaaggatcgggggcatgaccaggattggccagaagaaagataccgtgatgatagagatgtcgcacgtgacagagagagggaccgggatcatgaacgttctagagaacgagggcgtgatcgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60543" stop="61836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60843" g_stop="61536" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E483333" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E483333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60843" e_stop="61536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGGTAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCG</genome_strand>
        <mrna_strand>GCAGGAAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCACATGTAAATCCTGCTTTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCATGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGATAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGAGAGAAAACATCGAGAAGGCAGAGAACCTTCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGGCATGACCAGGATTGGCCAGAAGAAAGATACCGTGATGATAGAGATGTCGCACGTGACAGAGAGAGGGACCGGGATCATGAACGTTCTAGAGAACGAGGGCGTGATCGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447440" ref_strand="+" ref_description="SGN-E447440 [cSTA-26-B17]">
      <seq>atttggacaaggtatgggtggtgcacctcctattatgcatcatcaaacaatgatgggtcaaggctttgatcctgcttttggagggcctatggggagaatgggtggttatggaggatttcctggtggtccagctccaccattttcctggtatgttgtcatcttttccacctgttggaggagttgggatgcctggagtagctccgcatgtaaatcctgcattctttggtagaggaatgccaatgaatggtatgggaatgatgccaggcgctggtatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcatggtggtagagcaggagagtcaagttatgcagaagaagctggttctgatcatcagtatggagaaacaactcacgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60578" stop="61589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60878" g_stop="61289" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E447440" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E447440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60878" e_stop="61289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCA-TTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGAT</genome_strand>
        <mrna_strand>ATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCATCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCATGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGTTCTGATCATCAGTATGGAGAAACAACTCACGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257228" ref_strand="+" ref_description="SGN-E257228 [cLEG-46-P2]">
      <seq>tttcctggtggtccagctccaccatttcctggtatgttgtcatcttttccacctgttggaggagttgggatgcctggagtagctccgcatgtaaatcctgcattctttggtagaggaatgccaatgaatggtatgggaatgatgccaggcgctggtatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcacggtggtagagcaggagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagacagaggatcagagcgtgattggtctggttctacagatagaaaacatagagaaggcagagaaccatcctatgatagagacatggctcgtgaaaaggatcggggccacgaccaggattggccagagaaaagataccgcgatgatagagatgtcgcacgagacagagagagggaccgggatcatgaacgtcctagagaacgaaggcgtgatcgcgagagggatcgtgatcgtcatagggatgatagagatagatatgctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60693" stop="61883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60993" g_stop="61583" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E257228" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60993" e_stop="61583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGAT</genome_strand>
        <mrna_strand>TTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAAGGCGTGATCGCGAGAGGGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E592480" ref_strand="+" ref_description="SGN-E592480 [46215]">
      <seq>accatttcctggtatgttgtcatcttttccacctgttggaggagttgggatgcctggagtagctccgcatgtaaatcctgcattctttggtagaggaatgccaatgaatggtatgggaatgatgccaggcgctggtatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcatggtggtagagcagagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgttaaagagaaagatagaggatcagaacgtgattggtctggttctacagagagaaaacatcgagaaggcagagaaccttcctatgatagagacatggctcgtgaaaaggatcgggggcatgaccaggattggccagagaaaagataccgtgatgatagagatgtcgcacgtgacagagagaaggaccgggatcatgaacgttctagagaacgagggcgtgatcgtgagagggatcgagatcgtgatcgtcatagggatgatagagatagatatgctgatcatcataggtacaaggaccgtgagcaagaaatatgatgatgaagaccgaggaaagatcatcaagggggaacacagtaaatccacgattatcaccatgaggaaagaccattcgatccagatacaagggatgctgattatggaaagaagcggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60713" stop="62024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61013" g_stop="61725" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E592480" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E592480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61013" e_stop="61725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGA--G---G-GATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAG-AATATGATGATGAAGACAGAGG-AAGATCATCAA-GAGG-ACACAGCAAAT-CACGATTATCA-CATGAGG-AAGACCA-TCGGTCAAGAT-CAAGGGATGCTGATTATGGAAAGAGGCGGC</genome_strand>
        <mrna_strand>ACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCATGGTGGTAGAGCA-GAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTTAAAGAGAAAGATAGAGGATCAGAACGTGATTGGTCTGGTTCTACAGAGAGAAAACATCGAGAAGGCAGAGAACCTTCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGGCATGACCAGGATTGGCCAGAGAAAAGATACCGTGATGATAGAGATGTCGCACGTGACAGAGAGAAGGACCGGGATCATGAACGTTCTAGAGAACGAGGGCGTGATCGTGAGAGGGATCGAGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCATAGGTACAAGGACCGTGAGCAAGAAATATGATGATGAAGACCGAGGAAAGATCATCAAGGGGGAACACAGTAAATCCACGATTATCACCATGAGGAAAGACCATTCGATCCAGATACAAGGGATGCTGATTATGGAAAGAAGCGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312142" ref_strand="+" ref_description="SGN-E312142 [cTOA-11-O13]">
      <seq>tgggaatgatgccaggcgctggtatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcacggtggtagagcaggagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagacagaggatcagagcgtgattggtctggttctacagatagaaaacatagagaaggcagagaaccatcctatgatagagacatggctcgtgaaaaggatcggggccacgaccaggattggccagagaaaagataccgcgatgatagagatgtcgcacgagacagagagagggaccgcgatcatgaacgtcctagagaacgagggcgtgatcgcgagagggatcgagatcgtgatcgtcatagggatgatagagatagatatgctgatcatcacaagtacaaggaccgtgagcaggaatatgatgatgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60826" stop="61890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61126" g_stop="61626" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="507" r_length="507" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E312142" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61126" e_stop="61626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATC--G-T-G--ATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAG</genome_strand>
        <mrna_strand>TGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGCGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGAGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAAGTACAAGGACCGTGAGCAGGAATATGATGATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E599415" ref_strand="+" ref_description="SGN-E599415 [52403]">
      <seq>tatggaggggcctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcatggtggtagagcaggagagtcaagttatgcagaagaagctggttctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagatagaggatcagagcgtgattggtctggttctacagagagaaaacatcgagaaggcagagaaccttcctatgatagagacatggctcgtgaaaaggatcgggggcatgaccaggattggccagagaaaagataccgtgatgatagagatgtcgcacgtgacagagagaaggaccgggatcatgaacgttctagagaacgagggcgtgatcgtgagagggatcgagatcgtgatcgtcatagggatgatagagatagatatgctgatcatcataggtacaaggaccgtgagcaagaatatgatgatgaagacagaggaagatcatcaaggggacacagtaaatcacgattatcacatgaggaagaccatcgatctagatcaagggatgctgattatggaaagaggcggcgtataacttctgagtgatctgtggccttggctgcttattttcaagggtacttcacaattgagatcgattagtagctaatctactgagggtttgccgtgtgtattcagggcttctactgggaagcttctttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60848" stop="62157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61148" g_stop="61857" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="717" r_length="717" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E599415" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E599415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61148" e_stop="61857"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGA--G---G-GATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACATGAGGAAGACCATCGGTCAAGATCAAGGGATGCTGATTATGGAAAGAGGCGGCGTATAATGTCCGAGTGATCTGTGG-CTTGGCTCCTTATTTTCAAGGGTACTTCACAA-TGAGATCGATTAGTAGCTAATCTACTGAGGGTTTACCATGTGTATCCAGGCTTTCTACTGGGAGGCTTCCTTTTCT</genome_strand>
        <mrna_strand>TATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCATGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGTTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGATAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGAGAGAAAACATCGAGAAGGCAGAGAACCTTCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGGCATGACCAGGATTGGCCAGAGAAAAGATACCGTGATGATAGAGATGTCGCACGTGACAGAGAGAAGGACCGGGATCATGAACGTTCTAGAGAACGAGGGCGTGATCGTGAGAGGGATCGAGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCATAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGGGGACACAGTAAATCACGATTATCACATGAGGAAGACCATCGATCTAGATCAAGGGATGCTGATTATGGAAAGAGGCGGCGTATAACTTCTGAGTGATCTGTGGCCTTGGCTGCTTATTTTCAAGGGTACTTCACAATTGAGATCGATTAGTAGCTAATCTACTGAGGGTTTGCCGTGTGTATTCAGGGCTTCTACTGGGAAGCTT-CTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228330" ref_strand="+" ref_description="SGN-E228330 [cLED-3-I1]">
      <seq>ctaacatggggatgtggtcagaacctaatgcgggtggatgggctggtgacgagcacggtggtagagcaggagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagacagaggatcagagcgtgattggtctggttctacagatagaaaacatagagaaggcagagaaccatcctatgatagagacatggctcgtgaaaaggatcggggccacgaccaggattggccagagaaaagataccgcgatgatagagatgtcgcacgagacagagagagggaccgcgatcatgaacgtnctagagaacgagggcgtgatcgcgagagggatcgagatcgtgatcgtcatagggatgatagagatagatatgctgatcatcacaggtacaaggaccgtgagcaggaatatgatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60859" stop="61890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61159" g_stop="61624" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E228330" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61159" e_stop="61624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATC--G-T---GATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGA</genome_strand>
        <mrna_strand>CTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGCGATCATGAACGTNCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGAGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAGGAATATGATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467641" ref_strand="+" ref_description="SGN-E467641 [cSTB-1-M2]">
      <seq>gtcagaacctaatgccggtggatgggctggtgaccagcatggtggtagagcaggagagtcaagttatgcagaagaagctggttctgatcatcagtatggagaaacaactcacgatagaggggcttggcccaataatgtgaaagagaaagatagaggatcagagcgtgattggtctggttctaccagagagaaaacatcgagaaggcagagaaccttcctatgatagagacatggctcgtgaaaaggatcgggggcatgaccaggattggcccgagaaaagataccgtgatgatagagatgtcgcacgtgacagagagaaggaccgggatcatgaacgttctagagaacgagggcgtgatcgtgagagggatcgagatcgtgatcgtcatagggatgatagagatagatatgctgatcatcataggtacaaggaccgtgagcaagaatatgatgatgaagacagaggaagatcatcaaggggacacagtaaatcacgattatcacatgaggaagaccatcgatctagatcaagggatgctgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60875" stop="62011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61175" g_stop="61711" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="544" r_length="544" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E467641" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467641" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61175" e_stop="61711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTA-CAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGA--G---G-GATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACATGAGGAAGACCATCGGTCAAGATCAAGGGATGCTGATTA</genome_strand>
        <mrna_strand>GTCAGAACCTAATGCCGGTGGATGGGCTGGTGACCAGCATGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGTTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCCAATAATGTGAAAGAGAAAGATAGAGGATCAGAGCGTGATTGGTCTGGTTCTACCAGAGAGAAAACATCGAGAAGGCAGAGAACCTTCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGGCATGACCAGGATTGGCCCGAGAAAAGATACCGTGATGATAGAGATGTCGCACGTGACAGAGAGAAGGACCGGGATCATGAACGTTCTAGAGAACGAGGGCGTGATCGTGAGAGGGATCGAGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCATAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGGGGACACAGTAAATCACGATTATCACATGAGGAAGACCATCGATCTAGATCAAGGGATGCTGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376475" ref_strand="+" ref_description="SGN-E376475 [TUS-17-L1]">
      <seq>tgggctggtgacgagcacggtggtagagcaggagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagacagaggatcagagcgtgattggtctggttctacagatagaaaacatagagaaggcagagaaccatcctatgatagagacatggctcgtgaaaaggatcggggccacgaccaggattggccagagaaaagataccgcgatgatagagatgtcgcacgagacagagagagggaccgggatcatgaacgtcctagagaacgagggcgtgatcgcgagagggatcgtgatcgtcatagggatgatagagatagatatgctgatcatcacaggtacaaggaccgtgagcaagaatatgatgatgaagacagaggaagatcatcaagaggacacagcaaatcacgattatcacatgaggaagaccatcggtcaagatcaagggatgctgattatggaaagaggcggcgtataatgtccgagtgatctgtggcttggctccttattttcaagggtacttcacaatgagatcgattagtagctaatctactgagggtttaccattgtgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60897" stop="62125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61197" g_stop="61825" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E376475" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61197" e_stop="61825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACATGAGGAAGACCATCGGTCAAGATCAAGGGATGCTGATTATGGAAAGAGGCGGCGTATAATGTCCGAGTGATCTGTGGCTTGGCTCCTTATTTTCAAGGGTACTTCACAATGAGATCGATTAGTAGCTAATCTACTGAGGGTTTACCA-TGTGTA</genome_strand>
        <mrna_strand>TGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACATGAGGAAGACCATCGGTCAAGATCAAGGGATGCTGATTATGGAAAGAGGCGGCGTATAATGTCCGAGTGATCTGTGGCTTGGCTCCTTATTTTCAAGGGTACTTCACAATGAGATCGATTAGTAGCTAATCTACTGAGGGTTTACCATTGTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210575" ref_strand="+" ref_description="SGN-E210575 [cLEC-35-P14]">
      <seq>tgggctggtgacgagcacggtggtagagcaggagagtcaagttatgcagaagaagctgggtctgatcatcagtatggagaaacaactcacgatagaggggcttggccaaataatgtgaaagagaaagacagaggatcagagcgtgattggtctggttctacagatagaaaacatagagaaggcagagaaccatcctatgatagagacatggctcgtgaaaaggatcggggccacgaccaggattggccagagaaaagataccgcgatgatagagatgtcgcacgagacagagagagggaccgggatcatgaacgtcctagagaacgagggcgtgatcgcgagagggatcgtgatcgtcatacggatgatagagatagatatgctgatcatcacaggtacaaggaccgtgagcaagaatatgatgatgaagacagaggaagatcatcaagaggacacagcaaatcacgattatcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0001N06-jmcY1/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0001N06.1" temp_strand="+" temp_description="C07HBa0001N06.1  AC210345.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0001N06 upload_account_name:france">
        <position start="60897" stop="61972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61197" g_stop="61672" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0001N06.1" gen_strand="+" ref_id="SGN-E210575" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0001N06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61197" e_stop="61672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACA</genome_strand>
        <mrna_strand>TGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGTGATCGTCATACGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>32</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2207" PGL_stop="1467"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2207" e_stop="1611"/>
            <exon e_start="1508" e_stop="1467"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.080" e_score="0.970"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="2207" e_stop="1611" e_length="597"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.080">
            <gDNA_intron_boundary i_start="1610" i_stop="1509" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1508" e_stop="1467" e_length="42"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2207" stop="1611"/>
              <exon start="1508" stop="1467"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559172" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTATTTGCTCTTCTCCACTAAATAGAGACTTGGATATCGTTGATGCTGATCAATCTAAGCCCGTGCTTGAGGGTTTCATTATAGATGCCTCAACATCAGGTGGAGAATTAGATATTACGCAGCTAGAGATCAACTATGAGACGACAATTCAGCGTGCGAGCATTCTGGAGCAGATCTGCAAATCAGCAAGTGCACGTACACCTTTATCTCATTTCACATCTTCTTTTGGGTTTGACCGTGCTCAAAATCTATATCAATCTTTACCTAATGGGCTTCTTGAGCATCTGGATCTGAGCACCTTCTTGTCGGAGGAGGATGTCAACAAACAGGTTAGGGCAAGTGATAGCTGCATAGATGAAGCGAAAGATTCTAAACTGAAGATACCTTGTTCTGATTATCAACCTTCTTACGGATGTCAATTTGGAGGGAGGTCAGGAAATCAATACCAGTCTCCTGTTGGAAAGTTTTGGGAAAGGATCTCGTCACATTCTAGCAGTTCAGAGAAGGGTTTGAACTTAAACCCAGAGCTCATGTGTTTCCCAATTGAGGAGGATCCCAATAGTAGTGAGGAGAATGAGACTGCAGATATGGCAG : TCTCTGCGGCTGAGAGGTCTCATGCAAGGGGAAGTTTGGATT</gDNA_template>
            <first_frame> L  L  F  A  L  L  H  *  I  E  T  W  I  S  L  M  L  I  N  L  S  P  C  L  R  V  S  L  *  M  P  Q  H  Q  V  E  N  *  I  L  R  S  *  R  S  T  M  R  R  Q  F  S  V  R  A  F  W  S  R  S  A  N  Q  Q  V  H  V  H  L  Y  L  I  S  H  L  L  L  G  L  T  V  L  K  I  Y  I  N  L  Y  L  M  G  F  L  S  I  W  I  *  A  P  S  C  R  R  R  M  S  T  N  R  L  G  Q  V  I  A  A  *  M  K  R  K  I  L  N  *  R  Y  L  V  L  I  I  N  L  L  T  D  V  N  L  E  G  G  Q  E  I  N  T  S  L  L  L  E  S  F  G  K  G  S  R  H  I  L  A  V  Q  R  R  V  *  T  *  T  Q  S  S  C  V  S  Q  L  R  R  I  P  I  V  V  R  R  M  R  L  Q  I  W  Q  :  S  L  R  L  R  G  L  M  Q  G  E  V  W  I </first_frame>
            <second_frame>  F  Y  L  L  F  S  T  K  *  R  L  G  Y  R  *  C  *  S  I  *  A  R  A  *  G  F  H  Y  R  C  L  N  I  R  W  R  I  R  Y  Y  A  A  R  D  Q  L  *  D  D  N  S  A  C  E  H  S  G  A  D  L  Q  I  S  K  C  T  Y  T  F  I  S  F  H  I  F  F  W  V  *  P  C  S  K  S  I  S  I  F  T  *  W  A  S  *  A  S  G  S  E  H  L  L  V  G  G  G  C  Q  Q  T  G  *  G  K  *  *  L  H  R  *  S  E  R  F  *  T  E  D  T  L  F  *  L  S  T  F  L  R  M  S  I  W  R  E  V  R  K  S  I  P  V  S  C  W  K  V  L  G  K  D  L  V  T  F  *  Q  F  R  E  G  F  E  L  K  P  R  A  H  V  F  P  N  *  G  G  S  Q  *  *  *  G  E  *  D  C  R  Y  G  S :   L  C  G  *  E  V  S  C  K  G  K  F  G   </second_frame>
            <third_frame>   F  I  C  S  S  P  L  N  R  D  L  D  I  V  D  A  D  Q  S  K  P  V  L  E  G  F  I  I  D  A  S  T  S  G  G  E  L  D  I  T  Q  L  E  I  N  Y  E  T  T  I  Q  R  A  S  I  L  E  Q  I  C  K  S  A  S  A  R  T  P  L  S  H  F  T  S  S  F  G  F  D  R  A  Q  N  L  Y  Q  S  L  P  N  G  L  L  E  H  L  D  L  S  T  F  L  S  E  E  D  V  N  K  Q  V  R  A  S  D  S  C  I  D  E  A  K  D  S  K  L  K  I  P  C  S  D  Y  Q  P  S  Y  G  C  Q  F  G  G  R  S  G  N  Q  Y  Q  S  P  V  G  K  F  W  E  R  I  S  S  H  S  S  S  S  E  K  G  L  N  L  N  P  E  L  M  C  F  P  I  E  E  D  P  N  S  S  E  E  N  E  T  A  D  M  A   : V  S  A  A  E  R  S  H  A  R  G  S  L  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2205" stop="1611"/>
                    <exon start="1508" stop="1468"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FICSSPLNRDLDIVDADQSKPVLEGFIIDASTSGGELDITQLEINYETTIQRASILEQICKSASARTPLSHFTSSFGFDRAQNLYQSLPNGLLEHLDLSTFLSEEDVNKQVRASDSCIDEAKDSKLKIPCSDYQPSYGCQFGGRSGNQYQSPVGKFWERISSHSSSSEKGLNLNPELMCFPIEEDPNSSEENETADMAVSAAERSHARGSLD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="10490" PGL_stop="14404"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10490" e_stop="10685"/>
            <exon e_start="11244" e_stop="11328"/>
            <exon e_start="11882" e_stop="11955"/>
            <exon e_start="12252" e_stop="12337"/>
            <exon e_start="12682" e_stop="12765"/>
            <exon e_start="12963" e_stop="13047"/>
            <exon e_start="13595" e_stop="13674"/>
            <exon e_start="13741" e_stop="13842"/>
            <exon e_start="14045" e_stop="14103"/>
            <exon e_start="14196" e_stop="14404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="0.867"/>
          <exon-intron don_prob="0.998" acc_prob="0.887" e_score="0.953"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.986"/>
          <exon-intron don_prob="0.864" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="0.988"/>
          <exon-intron don_prob="0.647" acc_prob="0.930" e_score="0.953"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="0.950"/>
          <exon-intron don_prob="0.994" acc_prob="0.905" e_score="0.951"/>
          <exon-intron don_prob="0.922" acc_prob="0.992" e_score="0.966"/>
          <exon-only e_score="0.866"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.867">
            <gDNA_exon_boundary e_start="10490" e_stop="10685" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="10686" i_stop="11243" i_length="558"/>
          </intron>
          <exon e_serial="2" e_score="0.953">
            <gDNA_exon_boundary e_start="11244" e_stop="11328" e_length="85"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.887">
            <gDNA_intron_boundary i_start="11329" i_stop="11881" i_length="553"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="11882" e_stop="11955" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="11956" i_stop="12251" i_length="296"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12252" e_stop="12337" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.864" acc_prob="0.987">
            <gDNA_intron_boundary i_start="12338" i_stop="12681" i_length="344"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="12682" e_stop="12765" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="12766" i_stop="12962" i_length="197"/>
          </intron>
          <exon e_serial="6" e_score="0.953">
            <gDNA_exon_boundary e_start="12963" e_stop="13047" e_length="85"/>
          </exon>
          <intron i_serial="6" don_prob="0.647" acc_prob="0.930">
            <gDNA_intron_boundary i_start="13048" i_stop="13594" i_length="547"/>
          </intron>
          <exon e_serial="7" e_score="0.950">
            <gDNA_exon_boundary e_start="13595" e_stop="13674" e_length="80"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="13675" i_stop="13740" i_length="66"/>
          </intron>
          <exon e_serial="8" e_score="0.951">
            <gDNA_exon_boundary e_start="13741" e_stop="13842" e_length="102"/>
          </exon>
          <intron i_serial="8" don_prob="0.994" acc_prob="0.905">
            <gDNA_intron_boundary i_start="13843" i_stop="14044" i_length="202"/>
          </intron>
          <exon e_serial="9" e_score="0.966">
            <gDNA_exon_boundary e_start="14045" e_stop="14103" e_length="59"/>
          </exon>
          <intron i_serial="9" don_prob="0.922" acc_prob="0.992">
            <gDNA_intron_boundary i_start="14104" i_stop="14195" i_length="92"/>
          </intron>
          <exon e_serial="10" e_score="0.866">
            <gDNA_exon_boundary e_start="14196" e_stop="14404" e_length="209"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10490" stop="10685"/>
              <exon start="11244" stop="11328"/>
              <exon start="11882" stop="11955"/>
              <exon start="12252" stop="12337"/>
              <exon start="12682" stop="12765"/>
              <exon start="12963" stop="13047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415413" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12727" stop="12765"/>
              <exon start="12963" stop="13047"/>
              <exon start="13595" stop="13674"/>
              <exon start="13741" stop="13842"/>
              <exon start="14045" stop="14103"/>
              <exon start="14196" stop="14404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415414" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTCTAATATTCTCTTTTATTTTAGTCCCATTCGCCGTCGCTTCTCCACGTCTCAACTGCTGACCGGCGACCGGCGACCGGCGGAACAACAAGAAAATTCCCAGCCTATTTTACACGCAGGCCATATTCGACGTGGTTATTATATCCTCCGAAGCAGATCTCCGTGGAAAATACTCTTCACCAGCAACATGTCTA : GTAAGACCGACATTGCTTTACCGTTGGATAAGTTGTCTTTGGATTTAATAAAACAAATGGAGGGGCAACTAAGTCCTGAAAAGAG : GAAAAGGACATATGCAGTTCTTGTATCAACAGGAAGTTTCAATCCTCCAACTTATATGCACTTGCGCTGTTTTG : AGTTGGCAAGAGATGCATTGACTTCAGAAGGAATTTGTGTGATTGGAGGTTACATGTCACCTGTAAATGATGCATATAAGAAGAAG : AATCTTATATCTGCTGAGCATCGTGTTGCAATGTGCCAGTTAGCCTGTAAAAGCTCAGAATTTGTTATGACGGATCCCTGGGAG : GCAAGTCAGGATAGCTATCAACGAACATTGACGGTTCTCTCCAGAATAAAAAGCGCTATCAGTGGTGGAAGTTTGACATCCACCA : ATGACCTCATGGTTACGCTGGTATGTGGTTCTGATCTGCTAGAATCTTTCAGCACACCTGGTGTTTGGATACCTGAGCAG : GTCAGGGCCATATGTAGAGACTTCGGCTTGGTTTGTATCCGAAGAAGTGGCCAGGATGTTGAAAAAATCATCACTGGTGACGAAATTTTGAATGAATATAAG : AAGAATATCCGAGTCGTGGATGAAGTAGTACCAAACGGAATCAGTTCAACGGGACTAAG : GGACTGCATCTCAAAAGGGTTATCAGTGAAATACTTGACAGCTGATGAAGTAATTGATTATATCAAACAACACAATCTTTACAAAGGGCAATGATCCAACAACTGACTCCAATTATAATTTTTTTTAAAAAAATAAAGTGCAAGTACATATCCTACTTCATGTGATTAAGAACACACATAAAACCCAAGTTCTCTTTAAAAGTGCATCT</gDNA_template>
            <first_frame> L  S  N  I  L  F  Y  F  S  P  I  R  R  R  F  S  T  S  Q  L  L  T  G  D  R  R  P  A  E  Q  Q  E  N  S  Q  P  I  L  H  A  G  H  I  R  R  G  Y  Y  I  L  R  S  R  S  P  W  K  I  L  F  T  S  N  M  S   : S  K  T  D  I  A  L  P  L  D  K  L  S  L  D  L  I  K  Q  M  E  G  Q  L  S  P  E  K  R :   K  R  T  Y  A  V  L  V  S  T  G  S  F  N  P  P  T  Y  M  H  L  R  C  F   : E  L  A  R  D  A  L  T  S  E  G  I  C  V  I  G  G  Y  M  S  P  V  N  D  A  Y  K  K  K  :  N  L  I  S  A  E  H  R  V  A  M  C  Q  L  A  C  K  S  S  E  F  V  M  T  D  P  W  E  :  A  S  Q  D  S  Y  Q  R  T  L  T  V  L  S  R  I  K  S  A  I  S  G  G  S  L  T  S  T   : N  D  L  M  V  T  L  V  C  G  S  D  L  L  E  S  F  S  T  P  G  V  W  I  P  E  Q  :  V  R  A  I  C  R  D  F  G  L  V  C  I  R  R  S  G  Q  D  V  E  K  I  I  T  G  D  E  I  L  N  E  Y  K  :  K  N  I  R  V  V  D  E  V  V  P  N  G  I  S  S  T  G  L  R :   D  C  I  S  K  G  L  S  V  K  Y  L  T  A  D  E  V  I  D  Y  I  K  Q  H  N  L  Y  K  G  Q  *  S  N  N  *  L  Q  L  *  F  F  L  K  K  *  S  A  S  T  Y  P  T  S  C  D  *  E  H  T  *  N  P  S  S  L  *  K  C  I  </first_frame>
            <second_frame>  F  L  I  F  S  F  I  L  V  P  F  A  V  A  S  P  R  L  N  C  *  P  A  T  G  D  R  R  N  N  K  K  I  P  S  L  F  Y  T  Q  A  I  F  D  V  V  I  I  S  S  E  A  D  L  R  G  K  Y  S  S  P  A  T  C  L  :  V  R  P  T  L  L  Y  R  W  I  S  C  L  W  I  *  *  N  K  W  R  G  N  *  V  L  K  R   : G  K  G  H  M  Q  F  L  Y  Q  Q  E  V  S  I  L  Q  L  I  C  T  C  A  V  L  :  S  W  Q  E  M  H  *  L  Q  K  E  F  V  *  L  E  V  T  C  H  L  *  M  M  H  I  R  R  R :   I  L  Y  L  L  S  I  V  L  Q  C  A  S  *  P  V  K  A  Q  N  L  L  *  R  I  P  G  R :   Q  V  R  I  A  I  N  E  H  *  R  F  S  P  E  *  K  A  L  S  V  V  E  V  *  H  P  P  :  M  T  S  W  L  R  W  Y  V  V  L  I  C  *  N  L  S  A  H  L  V  F  G  Y  L  S  R :   S  G  P  Y  V  E  T  S  A  W  F  V  S  E  E  V  A  R  M  L  K  K  S  S  L  V  T  K  F  *  M  N  I  R :   R  I  S  E  S  W  M  K  *  Y  Q  T  E  S  V  Q  R  D  *   : G  T  A  S  Q  K  G  Y  Q  *  N  T  *  Q  L  M  K  *  L  I  I  S  N  N  T  I  F  T  K  G  N  D  P  T  T  D  S  N  Y  N  F  F  *  K  N  K  V  Q  V  H  I  L  L  H  V  I  K  N  T  H  K  T  Q  V  L  F  K  S  A  S </second_frame>
            <third_frame>   F  *  Y  S  L  L  F  *  S  H  S  P  S  L  L  H  V  S  T  A  D  R  R  P  A  T  G  G  T  T  R  K  F  P  A  Y  F  T  R  R  P  Y  S  T  W  L  L  Y  P  P  K  Q  I  S  V  E  N  T  L  H  Q  Q  H  V  * :   *  D  R  H  C  F  T  V  G  *  V  V  F  G  F  N  K  T  N  G  G  A  T  K  S  *  K  E  :  E  K  D  I  C  S  S  C  I  N  R  K  F  Q  S  S  N  L  Y  A  L  A  L  F  * :   V  G  K  R  C  I  D  F  R  R  N  L  C  D  W  R  L  H  V  T  C  K  *  C  I  *  E  E   : E  S  Y  I  C  *  A  S  C  C  N  V  P  V  S  L  *  K  L  R  I  C  Y  D  G  S  L  G   : G  K  S  G  *  L  S  T  N  I  D  G  S  L  Q  N  K  K  R  Y  Q  W  W  K  F  D  I  H  Q :   *  P  H  G  Y  A  G  M  W  F  *  S  A  R  I  F  Q  H  T  W  C  L  D  T  *  A   : G  Q  G  H  M  *  R  L  R  L  G  L  Y  P  K  K  W  P  G  C  *  K  N  H  H  W  *  R  N  F  E  *  I  *   : E  E  Y  P  S  R  G  *  S  S  T  K  R  N  Q  F  N  G  T  K  :  G  L  H  L  K  R  V  I  S  E  I  L  D  S  *  *  S  N  *  L  Y  Q  T  T  Q  S  L  Q  R  A  M  I  Q  Q  L  T  P  I  I  I  F  F  K  K  I  K  C  K  Y  I  S  Y  F  M  *  L  R  T  H  I  K  P  K  F  S  L  K  V  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10490" stop="10685"/>
                    <exon start="11244" stop="11328"/>
                    <exon start="11882" stop="11955"/>
                    <exon start="12252" stop="12337"/>
                    <exon start="12682" stop="12765"/>
                    <exon start="12963" stop="13047"/>
                    <exon start="13595" stop="13674"/>
                    <exon start="13741" stop="13842"/>
                    <exon start="14045" stop="14103"/>
                    <exon start="14196" stop="14289"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>942</number_coding_nucleotides>
                  <number_encoded_amino_acids>314</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSNILFYFSPIRRRFSTSQLLTGDRRPAEQQENSQPILHAGHIRRGYYILRSRSPWKILFTSNMSSKTDIALPLDKLSLDLIKQMEGQLSPEKRKRTYAVLVSTGSFNPPTYMHLRCFELARDALTSEGICVIGGYMSPVNDAYKKKNLISAEHRVAMCQLACKSSEFVMTDPWEASQDSYQRTLTVLSRIKSAISGGSLTSTNDLMVTLVCGSDLLESFSTPGVWIPEQVRAICRDFGLVCIRRSGQDVEKIITGDEILNEYKKNIRVVDEVVPNGISSTGLRDCISKGLSVKYLTADEVIDYIKQHNLYKGQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="10490" e_stop="10685"/>
            <exon e_start="11244" e_stop="11328"/>
            <exon e_start="11882" e_stop="11955"/>
            <exon e_start="12252" e_stop="12337"/>
            <exon e_start="12682" e_stop="12765"/>
            <exon e_start="12963" e_stop="13047"/>
            <exon e_start="13595" e_stop="13674"/>
            <exon e_start="13758" e_stop="13842"/>
            <exon e_start="14045" e_stop="14103"/>
            <exon e_start="14196" e_stop="14404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="0.867"/>
          <exon-intron don_prob="0.998" acc_prob="0.887" e_score="0.953"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.986"/>
          <exon-intron don_prob="0.864" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="0.988"/>
          <exon-intron don_prob="0.647" acc_prob="0.930" e_score="0.953"/>
          <exon-intron don_prob="0.999" acc_prob="0.298" e_score="0.962"/>
          <exon-intron don_prob="0.994" acc_prob="0.905" e_score="0.953"/>
          <exon-intron don_prob="0.922" acc_prob="0.992" e_score="0.966"/>
          <exon-only e_score="0.876"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.867">
            <gDNA_exon_boundary e_start="10490" e_stop="10685" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="10686" i_stop="11243" i_length="558"/>
          </intron>
          <exon e_serial="2" e_score="0.953">
            <gDNA_exon_boundary e_start="11244" e_stop="11328" e_length="85"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.887">
            <gDNA_intron_boundary i_start="11329" i_stop="11881" i_length="553"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="11882" e_stop="11955" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="11956" i_stop="12251" i_length="296"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12252" e_stop="12337" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.864" acc_prob="0.987">
            <gDNA_intron_boundary i_start="12338" i_stop="12681" i_length="344"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="12682" e_stop="12765" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="12766" i_stop="12962" i_length="197"/>
          </intron>
          <exon e_serial="6" e_score="0.953">
            <gDNA_exon_boundary e_start="12963" e_stop="13047" e_length="85"/>
          </exon>
          <intron i_serial="6" don_prob="0.647" acc_prob="0.930">
            <gDNA_intron_boundary i_start="13048" i_stop="13594" i_length="547"/>
          </intron>
          <exon e_serial="7" e_score="0.962">
            <gDNA_exon_boundary e_start="13595" e_stop="13674" e_length="80"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.298">
            <gDNA_intron_boundary i_start="13675" i_stop="13757" i_length="83"/>
          </intron>
          <exon e_serial="8" e_score="0.953">
            <gDNA_exon_boundary e_start="13758" e_stop="13842" e_length="85"/>
          </exon>
          <intron i_serial="8" don_prob="0.994" acc_prob="0.905">
            <gDNA_intron_boundary i_start="13843" i_stop="14044" i_length="202"/>
          </intron>
          <exon e_serial="9" e_score="0.966">
            <gDNA_exon_boundary e_start="14045" e_stop="14103" e_length="59"/>
          </exon>
          <intron i_serial="9" don_prob="0.922" acc_prob="0.992">
            <gDNA_intron_boundary i_start="14104" i_stop="14195" i_length="92"/>
          </intron>
          <exon e_serial="10" e_score="0.876">
            <gDNA_exon_boundary e_start="14196" e_stop="14404" e_length="209"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10490" stop="10685"/>
              <exon start="11244" stop="11328"/>
              <exon start="11882" stop="11955"/>
              <exon start="12252" stop="12337"/>
              <exon start="12682" stop="12765"/>
              <exon start="12963" stop="13047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415413" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12969" stop="13047"/>
              <exon start="13595" stop="13674"/>
              <exon start="13758" stop="13842"/>
              <exon start="14045" stop="14103"/>
              <exon start="14196" stop="14404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428143" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTCTAATATTCTCTTTTATTTTAGTCCCATTCGCCGTCGCTTCTCCACGTCTCAACTGCTGACCGGCGACCGGCGACCGGCGGAACAACAAGAAAATTCCCAGCCTATTTTACACGCAGGCCATATTCGACGTGGTTATTATATCCTCCGAAGCAGATCTCCGTGGAAAATACTCTTCACCAGCAACATGTCTA : GTAAGACCGACATTGCTTTACCGTTGGATAAGTTGTCTTTGGATTTAATAAAACAAATGGAGGGGCAACTAAGTCCTGAAAAGAG : GAAAAGGACATATGCAGTTCTTGTATCAACAGGAAGTTTCAATCCTCCAACTTATATGCACTTGCGCTGTTTTG : AGTTGGCAAGAGATGCATTGACTTCAGAAGGAATTTGTGTGATTGGAGGTTACATGTCACCTGTAAATGATGCATATAAGAAGAAG : AATCTTATATCTGCTGAGCATCGTGTTGCAATGTGCCAGTTAGCCTGTAAAAGCTCAGAATTTGTTATGACGGATCCCTGGGAG : GCAAGTCAGGATAGCTATCAACGAACATTGACGGTTCTCTCCAGAATAAAAAGCGCTATCAGTGGTGGAAGTTTGACATCCACCA : ATGACCTCATGGTTACGCTGGTATGTGGTTCTGATCTGCTAGAATCTTTCAGCACACCTGGTGTTTGGATACCTGAGCAG : AGACTTCGGCTTGGTTTGTATCCGAAGAAGTGGCCAGGATGTTGAAAAAATCATCACTGGTGACGAAATTTTGAATGAATATAAG : AAGAATATCCGAGTCGTGGATGAAGTAGTACCAAACGGAATCAGTTCAACGGGACTAAG : GGACTGCATCTCAAAAGGGTTATCAGTGAAATACTTGACAGCTGATGAAGTAATTGATTATATCAAACAACACAATCTTTACAAAGGGCAATGATCCAACAACTGACTCCAATTATAATTTTTTTTAAAAAAATAAAGTGCAAGTACATATCCTACTTCATGTGATTAAGAACACACATAAAACCCAAGTTCTCTTTAAAAGTGCATCT</gDNA_template>
            <first_frame> L  S  N  I  L  F  Y  F  S  P  I  R  R  R  F  S  T  S  Q  L  L  T  G  D  R  R  P  A  E  Q  Q  E  N  S  Q  P  I  L  H  A  G  H  I  R  R  G  Y  Y  I  L  R  S  R  S  P  W  K  I  L  F  T  S  N  M  S   : S  K  T  D  I  A  L  P  L  D  K  L  S  L  D  L  I  K  Q  M  E  G  Q  L  S  P  E  K  R :   K  R  T  Y  A  V  L  V  S  T  G  S  F  N  P  P  T  Y  M  H  L  R  C  F   : E  L  A  R  D  A  L  T  S  E  G  I  C  V  I  G  G  Y  M  S  P  V  N  D  A  Y  K  K  K  :  N  L  I  S  A  E  H  R  V  A  M  C  Q  L  A  C  K  S  S  E  F  V  M  T  D  P  W  E  :  A  S  Q  D  S  Y  Q  R  T  L  T  V  L  S  R  I  K  S  A  I  S  G  G  S  L  T  S  T   : N  D  L  M  V  T  L  V  C  G  S  D  L  L  E  S  F  S  T  P  G  V  W  I  P  E  Q  :  R  L  R  L  G  L  Y  P  K  K  W  P  G  C  *  K  N  H  H  W  *  R  N  F  E  *  I  *   : E  E  Y  P  S  R  G  *  S  S  T  K  R  N  Q  F  N  G  T  K  :  G  L  H  L  K  R  V  I  S  E  I  L  D  S  *  *  S  N  *  L  Y  Q  T  T  Q  S  L  Q  R  A  M  I  Q  Q  L  T  P  I  I  I  F  F  K  K  I  K  C  K  Y  I  S  Y  F  M  *  L  R  T  H  I  K  P  K  F  S  L  K  V  H   </first_frame>
            <second_frame>  F  L  I  F  S  F  I  L  V  P  F  A  V  A  S  P  R  L  N  C  *  P  A  T  G  D  R  R  N  N  K  K  I  P  S  L  F  Y  T  Q  A  I  F  D  V  V  I  I  S  S  E  A  D  L  R  G  K  Y  S  S  P  A  T  C  L  :  V  R  P  T  L  L  Y  R  W  I  S  C  L  W  I  *  *  N  K  W  R  G  N  *  V  L  K  R   : G  K  G  H  M  Q  F  L  Y  Q  Q  E  V  S  I  L  Q  L  I  C  T  C  A  V  L  :  S  W  Q  E  M  H  *  L  Q  K  E  F  V  *  L  E  V  T  C  H  L  *  M  M  H  I  R  R  R :   I  L  Y  L  L  S  I  V  L  Q  C  A  S  *  P  V  K  A  Q  N  L  L  *  R  I  P  G  R :   Q  V  R  I  A  I  N  E  H  *  R  F  S  P  E  *  K  A  L  S  V  V  E  V  *  H  P  P  :  M  T  S  W  L  R  W  Y  V  V  L  I  C  *  N  L  S  A  H  L  V  F  G  Y  L  S  R :   D  F  G  L  V  C  I  R  R  S  G  Q  D  V  E  K  I  I  T  G  D  E  I  L  N  E  Y  K  :  K  N  I  R  V  V  D  E  V  V  P  N  G  I  S  S  T  G  L  R :   D  C  I  S  K  G  L  S  V  K  Y  L  T  A  D  E  V  I  D  Y  I  K  Q  H  N  L  Y  K  G  Q  *  S  N  N  *  L  Q  L  *  F  F  L  K  K  *  S  A  S  T  Y  P  T  S  C  D  *  E  H  T  *  N  P  S  S  L  *  K  C  I  </second_frame>
            <third_frame>   F  *  Y  S  L  L  F  *  S  H  S  P  S  L  L  H  V  S  T  A  D  R  R  P  A  T  G  G  T  T  R  K  F  P  A  Y  F  T  R  R  P  Y  S  T  W  L  L  Y  P  P  K  Q  I  S  V  E  N  T  L  H  Q  Q  H  V  * :   *  D  R  H  C  F  T  V  G  *  V  V  F  G  F  N  K  T  N  G  G  A  T  K  S  *  K  E  :  E  K  D  I  C  S  S  C  I  N  R  K  F  Q  S  S  N  L  Y  A  L  A  L  F  * :   V  G  K  R  C  I  D  F  R  R  N  L  C  D  W  R  L  H  V  T  C  K  *  C  I  *  E  E   : E  S  Y  I  C  *  A  S  C  C  N  V  P  V  S  L  *  K  L  R  I  C  Y  D  G  S  L  G   : G  K  S  G  *  L  S  T  N  I  D  G  S  L  Q  N  K  K  R  Y  Q  W  W  K  F  D  I  H  Q :   *  P  H  G  Y  A  G  M  W  F  *  S  A  R  I  F  Q  H  T  W  C  L  D  T  *  A   : E  T  S  A  W  F  V  S  E  E  V  A  R  M  L  K  K  S  S  L  V  T  K  F  *  M  N  I  R :   R  I  S  E  S  W  M  K  *  Y  Q  T  E  S  V  Q  R  D  *   : G  T  A  S  Q  K  G  Y  Q  *  N  T  *  Q  L  M  K  *  L  I  I  S  N  N  T  I  F  T  K  G  N  D  P  T  T  D  S  N  Y  N  F  F  *  K  N  K  V  Q  V  H  I  L  L  H  V  I  K  N  T  H  K  T  Q  V  L  F  K  S  A  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10490" stop="10685"/>
                    <exon start="11244" stop="11328"/>
                    <exon start="11882" stop="11955"/>
                    <exon start="12252" stop="12337"/>
                    <exon start="12682" stop="12765"/>
                    <exon start="12963" stop="13047"/>
                    <exon start="13595" stop="13674"/>
                    <exon start="13758" stop="13802"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSNILFYFSPIRRRFSTSQLLTGDRRPAEQQENSQPILHAGHIRRGYYILRSRSPWKILFTSNMSSKTDIALPLDKLSLDLIKQMEGQLSPEKRKRTYAVLVSTGSFNPPTYMHLRCFELARDALTSEGICVIGGYMSPVNDAYKKKNLISAEHRVAMCQLACKSSEFVMTDPWEASQDSYQRTLTVLSRIKSAISGGSLTSTNDLMVTLVCGSDLLESFSTPGVWIPEQRLRLGLYPKKWPGC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="40201" PGL_stop="31071"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40201" e_stop="39988"/>
            <exon e_start="38493" e_stop="38464"/>
            <exon e_start="38372" e_stop="38280"/>
            <exon e_start="37062" e_stop="36943"/>
            <exon e_start="35633" e_stop="35533"/>
            <exon e_start="35374" e_stop="35266"/>
            <exon e_start="34957" e_stop="34878"/>
            <exon e_start="34709" e_stop="34631"/>
            <exon e_start="33961" e_stop="33908"/>
            <exon e_start="33444" e_stop="33348"/>
            <exon e_start="33125" e_stop="33043"/>
            <exon e_start="31915" e_stop="31848"/>
            <exon e_start="31160" e_stop="31071"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.725" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.999" e_score="0.978"/>
          <exon-intron don_prob="0.790" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.875" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40201" e_stop="39988" e_length="214"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="39987" i_stop="38494" i_length="1494"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38493" e_stop="38464" e_length="30"/>
          </exon>
          <intron i_serial="2" don_prob="0.725" acc_prob="0.912">
            <gDNA_intron_boundary i_start="38463" i_stop="38373" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="38372" e_stop="38280" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.936" acc_prob="0.999">
            <gDNA_intron_boundary i_start="38279" i_stop="37063" i_length="1217"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="37062" e_stop="36943" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.790" acc_prob="0.987">
            <gDNA_intron_boundary i_start="36942" i_stop="35634" i_length="1309"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="35633" e_stop="35533" e_length="101"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.998">
            <gDNA_intron_boundary i_start="35532" i_stop="35375" i_length="158"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="35374" e_stop="35266" e_length="109"/>
          </exon>
          <intron i_serial="6" don_prob="0.992" acc_prob="0.989">
            <gDNA_intron_boundary i_start="35265" i_stop="34958" i_length="308"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="34957" e_stop="34878" e_length="80"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.977">
            <gDNA_intron_boundary i_start="34877" i_stop="34710" i_length="168"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="34709" e_stop="34631" e_length="79"/>
          </exon>
          <intron i_serial="8" don_prob="0.980" acc_prob="0.992">
            <gDNA_intron_boundary i_start="34630" i_stop="33962" i_length="669"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="33961" e_stop="33908" e_length="54"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.936">
            <gDNA_intron_boundary i_start="33907" i_stop="33445" i_length="463"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="33444" e_stop="33348" e_length="97"/>
          </exon>
          <intron i_serial="10" don_prob="0.935" acc_prob="0.999">
            <gDNA_intron_boundary i_start="33347" i_stop="33126" i_length="222"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="33125" e_stop="33043" e_length="83"/>
          </exon>
          <intron i_serial="11" don_prob="0.995" acc_prob="0.991">
            <gDNA_intron_boundary i_start="33042" i_stop="31916" i_length="1127"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="31915" e_stop="31848" e_length="68"/>
          </exon>
          <intron i_serial="12" don_prob="0.976" acc_prob="0.875">
            <gDNA_intron_boundary i_start="31847" i_stop="31161" i_length="687"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="31160" e_stop="31071" e_length="90"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40201" stop="39988"/>
              <exon start="38493" stop="38464"/>
              <exon start="38372" stop="38280"/>
              <exon start="37062" stop="37011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40195" stop="39988"/>
              <exon start="38493" stop="38464"/>
              <exon start="38372" stop="38280"/>
              <exon start="37062" stop="36977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269711" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38334" stop="38280"/>
              <exon start="37062" stop="36943"/>
              <exon start="35633" stop="35533"/>
              <exon start="35374" stop="35266"/>
              <exon start="34957" stop="34878"/>
              <exon start="34709" stop="34631"/>
              <exon start="33961" stop="33908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35559" stop="35533"/>
              <exon start="35374" stop="35266"/>
              <exon start="34957" stop="34878"/>
              <exon start="34709" stop="34631"/>
              <exon start="33961" stop="33908"/>
              <exon start="33444" stop="33348"/>
              <exon start="33125" stop="33043"/>
              <exon start="31915" stop="31848"/>
              <exon start="31160" stop="31071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331411" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTTCTTTGAAGAGTATTCCTCTGCTTCTAATTCTTTAGTGATCAATCAATCTTTTTTCTCAAAGAGAAAATTAAAGAAGAACAGATTGTTCCTGAAGAACAAAGGGGAAAAAAATGTCTCTGGGTTATGCTGAAAAGCTTTCTTTTATAGAAGATGTGGGCAATGTTGGGATGACTGAGTATTTTGACCCACCTCTCCTTTTGCAAGACAAA : ATTGAGAGACTTGCTGTGATGATACAAAAG : AGTAAGCATTTAGTGGTGTTTACAGGAGCAGGAATATCCACTTCTTGTGGTATACCTGATTTTCGTGGTCCCAAGGGTATTTGGACTCTTCAG : AGAGAAGGGAAAGCGCTACCAGAAGCATCATTGCCTTTTCATCGTGCAACTCCAAGCATGACACACATGGCCCTAGTGGAACTAGAGAAGGCGGGTTTTCTAAAGTTTCTTATAAGCCAG : AACATTGATGGCCTTCATCTTCGCTCTGGAATTCCAAGGGAGAAGCTTTCTGAATTACATGGGGATTCTTTTATGGAACGATGCCCTTCTTGTGGAATTGA : GTATATGAGGGATTTTGAAATAGAAACTATTGGGTTGAAGGAAACTGCACGGCGTTGTTCCAAGGTGGGCTGTGGTGCAAGACTTAAAGACACAGTTCTTGACTGGGAG : GATGCTCTACCTCCAAAGGAGATGAATCCAGCTGAGAGACACTGCAAAATGGCTGATGTTGTGTTATGTCTAGGGACAAG : TTTGCAGATCACCCCTGCCTGTAATTTGCCTCTAAAATCACTCAAAGGCGGTGGAAAGATTGTAATAGTTAATCTTCAG : AAAACTCCCAAGGACAAGAAAGCAAGCCTACTGATTCATGGTCTTGTAGACAAG : GTTATCACAGGAGTCATGGAATTCCTCAGTCTGCGAATCCCACCTTTTATTAGAATTGATCTTCTCCAGACCATTTTTACTCAAGCCTCAAGTCTTG : ATGAAAAATATGTAAATTGGAGCCTTGCAGTGGCAAGCGTCCATGGAAATAGAGCACCATTGCCTTTTATCAAATCTGTAGAG : GTTTCTTTTTCAGAAAGTCAAAACATGAAAGCGGCTGTCCTGGATAAACAACCTCTTTATCTGAAAAG : GCGGACAGTTAAGAGTACAAATCCTTTTAACATTATGATGAAATTGAACTTCAGTGATGGTTGCAAGTGCTCATCGGCTGAAATCATGAT</gDNA_template>
            <first_frame> A  F  F  E  E  Y  S  S  A  S  N  S  L  V  I  N  Q  S  F  F  S  K  R  K  L  K  K  N  R  L  F  L  K  N  K  G  E  K  N  V  S  G  L  C  *  K  A  F  F  Y  R  R  C  G  Q  C  W  D  D  *  V  F  *  P  T  S  P  F  A  R  Q   : N  *  E  T  C  C  D  D  T  K   : E  *  A  F  S  G  V  Y  R  S  R  N  I  H  F  L  W  Y  T  *  F  S  W  S  Q  G  Y  L  D  S  S   : E  R  R  E  S  A  T  R  S  I  I  A  F  S  S  C  N  S  K  H  D  T  H  G  P  S  G  T  R  E  G  G  F  S  K  V  S  Y  K  P   : E  H  *  W  P  S  S  S  L  W  N  S  K  G  E  A  F  *  I  T  W  G  F  F  Y  G  T  M  P  F  L  W  N  *  :  V  Y  E  G  F  *  N  R  N  Y  W  V  E  G  N  C  T  A  L  F  Q  G  G  L  W  C  K  T  *  R  H  S  S  *  L  G   : G  C  S  T  S  K  G  D  E  S  S  *  E  T  L  Q  N  G  *  C  C  V  M  S  R  D  K  :  F  A  D  H  P  C  L  *  F  A  S  K  I  T  Q  R  R  W  K  D  C  N  S  *  S  S   : E  N  S  Q  G  Q  E  S  K  P  T  D  S  W  S  C  R  Q   : G  Y  H  R  S  H  G  I  P  Q  S  A  N  P  T  F  Y  *  N  *  S  S  P  D  H  F  Y  S  S  L  K  S  * :   *  K  I  C  K  L  E  P  C  S  G  K  R  P  W  K  *  S  T  I  A  F  Y  Q  I  C  R   : G  F  F  F  R  K  S  K  H  E  S  G  C  P  G  *  T  T  S  L  S  E  K  :  A  D  S  *  E  Y  K  S  F  *  H  Y  D  E  I  E  L  Q  *  W  L  Q  V  L  I  G  *  N  H  D </first_frame>
            <second_frame>  L  S  L  K  S  I  P  L  L  L  I  L  *  *  S  I  N  L  F  S  Q  R  E  N  *  R  R  T  D  C  S  *  R  T  K  G  K  K  M  S  L  G  Y  A  E  K  L  S  F  I  E  D  V  G  N  V  G  M  T  E  Y  F  D  P  P  L  L  L  Q  D  K  :  I  E  R  L  A  V  M  I  Q  K  :  S  K  H  L  V  V  F  T  G  A  G  I  S  T  S  C  G  I  P  D  F  R  G  P  K  G  I  W  T  L  Q  :  R  E  G  K  A  L  P  E  A  S  L  P  F  H  R  A  T  P  S  M  T  H  M  A  L  V  E  L  E  K  A  G  F  L  K  F  L  I  S  Q  :  N  I  D  G  L  H  L  R  S  G  I  P  R  E  K  L  S  E  L  H  G  D  S  F  M  E  R  C  P  S  C  G  I  E :   Y  M  R  D  F  E  I  E  T  I  G  L  K  E  T  A  R  R  C  S  K  V  G  C  G  A  R  L  K  D  T  V  L  D  W  E  :  D  A  L  P  P  K  E  M  N  P  A  E  R  H  C  K  M  A  D  V  V  L  C  L  G  T  S :   L  Q  I  T  P  A  C  N  L  P  L  K  S  L  K  G  G  G  K  I  V  I  V  N  L  Q  :  K  T  P  K  D  K  K  A  S  L  L  I  H  G  L  V  D  K  :  V  I  T  G  V  M  E  F  L  S  L  R  I  P  P  F  I  R  I  D  L  L  Q  T  I  F  T  Q  A  S  S  L   : D  E  K  Y  V  N  W  S  L  A  V  A  S  V  H  G  N  R  A  P  L  P  F  I  K  S  V  E  :  V  S  F  S  E  S  Q  N  M  K  A  A  V  L  D  K  Q  P  L  Y  L  K  R :   R  T  V  K  S  T  N  P  F  N  I  M  M  K  L  N  F  S  D  G  C  K  C  S  S  A  E  I  M   </second_frame>
            <third_frame>   F  L  *  R  V  F  L  C  F  *  F  F  S  D  Q  S  I  F  F  L  K  E  K  I  K  E  E  Q  I  V  P  E  E  Q  R  G  K  K  C  L  W  V  M  L  K  S  F  L  L  *  K  M  W  A  M  L  G  *  L  S  I  L  T  H  L  S  F  C  K  T  K :   L  R  D  L  L  *  *  Y  K  R :   V  S  I  *  W  C  L  Q  E  Q  E  Y  P  L  L  V  V  Y  L  I  F  V  V  P  R  V  F  G  L  F  R :   E  K  G  K  R  Y  Q  K  H  H  C  L  F  I  V  Q  L  Q  A  *  H  T  W  P  *  W  N  *  R  R  R  V  F  *  S  F  L  *  A  R :   T  L  M  A  F  I  F  A  L  E  F  Q  G  R  S  F  L  N  Y  M  G  I  L  L  W  N  D  A  L  L  V  E  L   : S  I  *  G  I  L  K  *  K  L  L  G  *  R  K  L  H  G  V  V  P  R  W  A  V  V  Q  D  L  K  T  Q  F  L  T  G  R :   M  L  Y  L  Q  R  R  *  I  Q  L  R  D  T  A  K  W  L  M  L  C  Y  V  *  G  Q   : V  C  R  S  P  L  P  V  I  C  L  *  N  H  S  K  A  V  E  R  L  *  *  L  I  F  R :   K  L  P  R  T  R  K  Q  A  Y  *  F  M  V  L  *  T  R :   L  S  Q  E  S  W  N  S  S  V  C  E  S  H  L  L  L  E  L  I  F  S  R  P  F  L  L  K  P  Q  V  L  :  M  K  N  M  *  I  G  A  L  Q  W  Q  A  S  M  E  I  E  H  H  C  L  L  S  N  L  *  R :   F  L  F  Q  K  V  K  T  *  K  R  L  S  W  I  N  N  L  F  I  *  K   : G  G  Q  L  R  V  Q  I  L  L  T  L  *  *  N  *  T  S  V  M  V  A  S  A  H  R  L  K  S  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40104" stop="39988"/>
                    <exon start="38493" stop="38464"/>
                    <exon start="38372" stop="38280"/>
                    <exon start="37062" stop="36943"/>
                    <exon start="35633" stop="35533"/>
                    <exon start="35374" stop="35266"/>
                    <exon start="34957" stop="34878"/>
                    <exon start="34709" stop="34631"/>
                    <exon start="33961" stop="33908"/>
                    <exon start="33444" stop="33348"/>
                    <exon start="33125" stop="33043"/>
                    <exon start="31915" stop="31848"/>
                    <exon start="31160" stop="31073"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1119</number_coding_nucleotides>
                  <number_encoded_amino_acids>373</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTKGKKMSLGYAEKLSFIEDVGNVGMTEYFDPPLLLQDKIERLAVMIQKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRATPSMTHMALVELEKAGFLKFLISQNIDGLHLRSGIPREKLSELHGDSFMERCPSCGIEYMRDFEIETIGLKETARRCSKVGCGARLKDTVLDWEDALPPKEMNPAERHCKMADVVLCLGTSLQITPACNLPLKSLKGGGKIVIVNLQKTPKDKKASLLIHGLVDKVITGVMEFLSLRIPPFIRIDLLQTIFTQASSLDEKYVNWSLAVASVHGNRAPLPFIKSVEVSFSESQNMKAAVLDKQPLYLKRRTVKSTNPFNIMMKLNFSDGCKCSSAEIM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="46155" PGL_stop="44601"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46155" e_stop="44601"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="46155" e_stop="44601" e_length="1555"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46155" stop="45581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46104" stop="44601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46069" stop="45521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45917" stop="45182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45808" stop="44904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45566" stop="44779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45399" stop="44622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713376" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGTGTAAAAATACATTATTGTATAAGGTTCGTACCTGAACAATAAATTTGCAGTCACTTGAGATCTCACTTGCCCCAATAACAACTCCTTGAATTTCACACAGTCACCGGAGTTCTTCTTTCTCTTACAACACCGACATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATTTGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACTTTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATCACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATCTACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAGCTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCAGCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTCAGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATTCCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCTCCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAAGTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGATGGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTTAAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATACCAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGAGCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAAATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCGCTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCGCCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCATCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGATTTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGTTTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGAAAAAGAATTTCATCAAATTAAAGTTAGTTACTGTATTATTAGTCTATTTCTCAGTTTTTAGATTTACTTCTTTGATTCTATTTGGAATTTTCATTAATGTAATATGAATCATTATTGACTTTTCAACCATTAATTATTATATGAAAAATTACGCGATTGAGTAGATTTATCCTCGGCATAA</gDNA_template>
            <first_frame> M  C  K  N  T  L  L  Y  K  V  R  T  *  T  I  N  L  Q  S  L  E  I  S  L  A  P  I  T  T  P  *  I  S  H  S  H  R  S  S  S  F  S  Y  N  T  D  M  Q  L  P  S  S  A  T  V  A  A  V  V  L  S  V  V  L  F  I  C  A  T  E  A  H  N  I  T  H  I  L  A  D  H  K  Q  F  S  T  F  N  H  Y  L  T  T  T  H  L  A  A  E  I  N  R  R  Q  T  I  T  V  C  A  V  D  N  A  G  M  S  D  L  L  S  K  Q  L  S  I  Y  T  I  K  N  V  L  S  F  H  V  L  L  D  Y  F  D  A  K  K  L  H  Q  I  T  N  G  T  A  L  A  A  T  M  F  Q  A  T  G  S  A  T  G  S  S  G  F  V  N  I  T  D  L  R  G  G  K  V  G  L  S  P  A  D  Y  N  G  P  P  P  A  K  F  V  K  S  I  A  E  I  P  Y  N  I  S  V  I  Q  I  S  T  I  L  P  S  D  E  A  E  A  P  T  P  G  P  S  Q  M  N  L  T  S  L  M  S  A  K  G  C  K  V  F  A  E  T  L  L  A  S  P  A  E  K  T  F  E  D  N  V  D  G  G  V  T  I  F  C  P  R  D  D  A  M  K  K  F  L  P  K  F  K  N  L  T  A  E  G  K  Q  S  L  L  E  Y  H  G  I  P  I  Y  Q  S  I  S  N  L  K  S  N  N  G  D  M  N  T  L  A  T  D  G  A  K  K  Y  A  V  V  I  Q  N  D  G  E  D  V  T  I  K  T  K  I  V  T  A  K  I  T  A  T  V  V  D  K  L  P  L  A  I  Y  S  L  D  K  V  L  L  P  E  E  L  F  K  A  S  P  T  P  A  P  A  P  A  P  E  A  R  A  E  S  P  K  H  S  K  S  P  P  A  P  A  S  P  A  E  S  P  A  D  S  P  A  D  G  P  N  G  D  A  D  D  L  T  D  S  G  A  V  K  Y  N  A  G  A  S  L  A  A  V  F  S  L  W  F  A  F  N  V  L  M  E  V  *  K  R  I  S  S  N  *  S  *  L  L  Y  Y  *  S  I  S  Q  F  L  D  L  L  L  *  F  Y  L  E  F  S  L  M  *  Y  E  S  L  L  T  F  Q  P  L  I  I  I  *  K  I  T  R  L  S  R  F  I  L  G  I  </first_frame>
            <second_frame>  C  V  K  I  H  Y  C  I  R  F  V  P  E  Q  *  I  C  S  H  L  R  S  H  L  P  Q  *  Q  L  L  E  F  H  T  V  T  G  V  L  L  S  L  T  T  P  T  C  S  F  R  R  R  P  P  W  L  R  W  F  S  P  *  S  F  L  F  V  P  L  K  L  I  T  L  L  T  F  *  P  T  I  N  S  S  P  L  S  T  I  T  *  Q  L  H  T  S  P  L  K  L  T  A  G  K  P  S  L  F  V  L  *  I  M  P  E  C  Q  I  Y  S  P  N  N  Y  L  S  T  L  *  K  T  F  S  L  F  T  C  F  S  I  T  S  T  L  K  S  F  T  R  L  L  T  A  R  H  L  P  P  Q  C  F  K  L  P  A  Q  L  P  D  L  L  D  S  *  T  L  L  I  *  E  E  V  K  S  G  S  V  R  L  I  T  T  V  L  L  R  L  N  L  *  N  Q  S  P  R  F  L  T  T  S  P  L  F  K  *  V  R  F  Y  P  Q  T  K  L  K  L  R  L  Q  D  Q  A  K  *  I  S  L  L  *  C  Q  L  K  A  A  K  F  S  P  R  L  Y  *  L  L  R  L  K  K  R  L  R  I  T  L  M  A  E  *  Q  Y  F  V  H  E  M  M  Q  *  R  N  F  C  L  N  L  R  I  *  Q  R  K  G  S  N  H  C  S  N  I  M  E  F  L  Y  T  N  R  F  R  I  *  N  R  I  M  E  I  *  T  L  *  L  L  T  E  L  R  S  T  L  *  S  F  K  M  T  V  K  M  L  L  *  K  R  K  L  *  R  R  R  S  R  L  L  W  L  I  N  C  H  *  R  F  T  R  L  I  R  C  Y  Y  P  R  N  C  S  R  L  V  L  L  R  R  R  R  R  H  R  R  H  V  L  N  L  L  S  T  P  S  H  H  R  H  L  H  L  R  L  S  L  Q  R  I  L  R  R  M  V  P  T  V  M  L  M  I  *  Q  I  A  V  L  L  S  T  M  P  E  H  H  L  P  P  F  S  V  Y  G  L  P  S  T  C  *  W  K  F  E  K  E  F  H  Q  I  K  V  S  Y  C  I  I  S  L  F  L  S  F  *  I  Y  F  F  D  S  I  W  N  F  H  *  C  N  M  N  H  Y  *  L  F  N  H  *  L  L  Y  E  K  L  R  D  *  V  D  L  S  S  A  * </second_frame>
            <third_frame>   V  *  K  Y  I  I  V  *  G  S  Y  L  N  N  K  F  A  V  T  *  D  L  T  C  P  N  N  N  S  L  N  F  T  Q  S  P  E  F  F  F  L  L  Q  H  R  H  A  A  S  V  V  G  H  R  G  C  G  G  S  L  R  S  P  F  Y  L  C  H  *  S  S  *  H  Y  S  H  S  S  R  P  *  T  V  L  H  F  Q  P  L  L  N  N  Y  T  P  R  R  *  N  *  P  P  A  N  H  H  C  L  C  C  R  *  C  R  N  V  R  S  T  L  Q  T  T  I  Y  L  H  Y  K  K  R  S  L  F  S  R  A  S  R  L  L  R  R  *  K  A  S  P  D  Y  *  R  H  G  T  C  R  H  N  V  S  S  Y  R  L  S  Y  R  I  F  W  I  R  K  H  Y  *  S  K  R  R  *  S  R  A  Q  S  G  *  L  Q  R  S  S  S  G  *  I  C  K  I  N  R  R  D  S  L  Q  H  L  R  Y  S  N  K  Y  D  F  T  L  R  R  S  *  S  S  D  S  R  T  K  P  N  E  S  H  F  S  N  V  S  *  R  L  Q  S  F  R  R  D  S  I  S  F  S  G  *  K  N  V  *  G  *  R  *  W  R  S  N  N  I  L  S  T  R  *  C  N  E  E  I  F  A  *  I  *  E  F  N  S  G  R  E  A  I  T  A  R  I  S  W  N  S  Y  I  P  I  D  F  E  F  E  I  E  *  W  R  Y  E  H  F  S  Y  *  R  S  *  E  V  R  C  S  H  S  K  *  R  *  R  C  Y  Y  K  N  E  N  C  D  G  E  D  H  G  Y  C  G  *  *  T  A  I  S  D  L  L  A  *  *  G  V  I  T  R  G  I  V  Q  G  *  S  Y  S  G  A  G  A  G  T  G  G  T  C  *  I  S  *  A  L  Q  V  T  T  G  T  C  I  S  G  *  V  S  S  G  F  S  G  G  W  S  Q  R  *  C  *  *  F  D  R  *  R  C  C  *  V  Q  C  R  S  I  T  C  R  R  F  Q  F  M  V  C  L  Q  R  V  D  G  S  L  K  K  N  F  I  K  L  K  L  V  T  V  L  L  V  Y  F  S  V  F  R  F  T  S  L  I  L  F  G  I  F  I  N  V  I  *  I  I  I  D  F  S  T  I  N  Y  Y  M  K  N  Y  A  I  E  *  I  Y  P  R  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46062" stop="44782"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1278</number_coding_nucleotides>
                  <number_encoded_amino_acids>426</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISHSHRSSSFSYNTDMQLPSSATVAAVVLSVVLFICATEAHNITHILADHKQFSTFNHYLTTTHLAAEINRRQTITVCAVDNAGMSDLLSKQLSIYTIKNVLSFHVLLDYFDAKKLHQITNGTALAATMFQATGSATGSSGFVNITDLRGGKVGLSPADYNGPPPAKFVKSIAEIPYNISVIQISTILPSDEAEAPTPGPSQMNLTSLMSAKGCKVFAETLLASPAEKTFEDNVDGGVTIFCPRDDAMKKFLPKFKNLTAEGKQSLLEYHGIPIYQSISNLKSNNGDMNTLATDGAKKYAVVIQNDGEDVTIKTKIVTAKITATVVDKLPLAIYSLDKVLLPEELFKASPTPAPAPAPEARAESPKHSKSPPAPASPAESPADSPADGPNGDADDLTDSGAVKYNAGASLAAVFSLWFAFNVLMEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="50182" PGL_stop="49363"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50182" e_stop="49363"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50182" e_stop="49363" e_length="820"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50182" stop="49475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49893" stop="49414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49863" stop="49363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E609574" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAATATTGTTTTCCGGCCACCGGAATATTCTATTCTTTCTCAATTTCACCGGAATATTCTGCTCTTTCTCATTTTCTTAGCACTGCAATATGTCTAAATTATTTGGCACTGTTGTTGTACTTTTTCTCGTGTTAAATTCCGGTGAAGCGCAAAATGCACCTTCTCAATCCCCAATTTCTTCTCCCTCTAAATCACCGGCGGTAAAATCACAAGCACCGGTTTCTTCCCCGACTAAATCACCGGCAGTGAGATCTCAAGCACCGGTTTCTTCGCCCTCGGCTCCTACGATTAGCCCGTCTGCAGCGCCGGTACAGTCACCGAAAGCAGCTTCTCCAGTAACCAGCGTTTCACCCGCACTCACTCCGTCAATCAGTAGATCTGCTCCGGTTCCTTCTGTTGCAACTCCTCCGCCGGTATCAACGCCGGTGAGCACTCCGGCATCTTCCCCGGCAGCAGCGGATGTTCCGGCCAGCACTGCGACACCGTCAGTATCCCCAAGCATACCTTCAAGTTCAGCAAGTCCGGCGGAGTCTGTTGACGGACCTACTACGGCGCCGGCGAGTTTATCACCGGGAACTTCACCAGCACCCGTTGCTGATGATGTTTCCGCTGCAATTTCAGTGTTGAAAGTGCCGATGGTTCTAAGTGGGCTTGCTATTTGGGCCGCACTTTCAATTTGAATGCATCCGGCCCAATGTTGCACAAAATTCCTATTATCGAGTCTTTTATCATATTTATTGTAATATTTTTGACACTTTTATTCATTCATTATCTTATTTGTTGTACTTTAATTTACTGATTATCATTTATAACAAATA</gDNA_template>
            <first_frame> L  N  I  V  F  R  P  P  E  Y  S  I  L  S  Q  F  H  R  N  I  L  L  F  L  I  F  L  A  L  Q  Y  V  *  I  I  W  H  C  C  C  T  F  S  R  V  K  F  R  *  S  A  K  C  T  F  S  I  P  N  F  F  S  L  *  I  T  G  G  K  I  T  S  T  G  F  F  P  D  *  I  T  G  S  E  I  S  S  T  G  F  F  A  L  G  S  Y  D  *  P  V  C  S  A  G  T  V  T  E  S  S  F  S  S  N  Q  R  F  T  R  T  H  S  V  N  Q  *  I  C  S  G  S  F  C  C  N  S  S  A  G  I  N  A  G  E  H  S  G  I  F  P  G  S  S  G  C  S  G  Q  H  C  D  T  V  S  I  P  K  H  T  F  K  F  S  K  S  G  G  V  C  *  R  T  Y  Y  G  A  G  E  F  I  T  G  N  F  T  S  T  R  C  *  *  C  F  R  C  N  F  S  V  E  S  A  D  G  S  K  W  A  C  Y  L  G  R  T  F  N  L  N  A  S  G  P  M  L  H  K  I  P  I  I  E  S  F  I  I  F  I  V  I  F  L  T  L  L  F  I  H  Y  L  I  C  C  T  L  I  Y  *  L  S  F  I  T  N  </first_frame>
            <second_frame>  *  I  L  F  S  G  H  R  N  I  L  F  F  L  N  F  T  G  I  F  C  S  F  S  F  S  *  H  C  N  M  S  K  L  F  G  T  V  V  V  L  F  L  V  L  N  S  G  E  A  Q  N  A  P  S  Q  S  P  I  S  S  P  S  K  S  P  A  V  K  S  Q  A  P  V  S  S  P  T  K  S  P  A  V  R  S  Q  A  P  V  S  S  P  S  A  P  T  I  S  P  S  A  A  P  V  Q  S  P  K  A  A  S  P  V  T  S  V  S  P  A  L  T  P  S  I  S  R  S  A  P  V  P  S  V  A  T  P  P  P  V  S  T  P  V  S  T  P  A  S  S  P  A  A  A  D  V  P  A  S  T  A  T  P  S  V  S  P  S  I  P  S  S  S  A  S  P  A  E  S  V  D  G  P  T  T  A  P  A  S  L  S  P  G  T  S  P  A  P  V  A  D  D  V  S  A  A  I  S  V  L  K  V  P  M  V  L  S  G  L  A  I  W  A  A  L  S  I  *  M  H  P  A  Q  C  C  T  K  F  L  L  S  S  L  L  S  Y  L  L  *  Y  F  *  H  F  Y  S  F  I  I  L  F  V  V  L  *  F  T  D  Y  H  L  *  Q  I </second_frame>
            <third_frame>   E  Y  C  F  P  A  T  G  I  F  Y  S  F  S  I  S  P  E  Y  S  A  L  S  H  F  L  S  T  A  I  C  L  N  Y  L  A  L  L  L  Y  F  F  S  C  *  I  P  V  K  R  K  M  H  L  L  N  P  Q  F  L  L  P  L  N  H  R  R  *  N  H  K  H  R  F  L  P  R  L  N  H  R  Q  *  D  L  K  H  R  F  L  R  P  R  L  L  R  L  A  R  L  Q  R  R  Y  S  H  R  K  Q  L  L  Q  *  P  A  F  H  P  H  S  L  R  Q  S  V  D  L  L  R  F  L  L  L  Q  L  L  R  R  Y  Q  R  R  *  A  L  R  H  L  P  R  Q  Q  R  M  F  R  P  A  L  R  H  R  Q  Y  P  Q  A  Y  L  Q  V  Q  Q  V  R  R  S  L  L  T  D  L  L  R  R  R  R  V  Y  H  R  E  L  H  Q  H  P  L  L  M  M  F  P  L  Q  F  Q  C  *  K  C  R  W  F  *  V  G  L  L  F  G  P  H  F  Q  F  E  C  I  R  P  N  V  A  Q  N  S  Y  Y  R  V  F  Y  H  I  Y  C  N  I  F  D  T  F  I  H  S  L  S  Y  L  L  Y  F  N  L  L  I  I  I  Y  N  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50100" stop="49501"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HCNMSKLFGTVVVLFLVLNSGEAQNAPSQSPISSPSKSPAVKSQAPVSSPTKSPAVRSQAPVSSPSAPTISPSAAPVQSPKAASPVTSVSPALTPSISRSAPVPSVATPPPVSTPVSTPASSPAAADVPASTATPSVSPSIPSSSASPAESVDGPTTAPASLSPGTSPAPVADDVSAAISVLKVPMVLSGLAIWAALSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="60135" PGL_stop="61857"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60135" e_stop="61857"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="60135" e_stop="61857" e_length="1723"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60135" stop="60578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60384" stop="61021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60520" stop="60886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60772" stop="61431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60843" stop="61536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483333" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60878" stop="61289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60993" stop="61583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61013" stop="61725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61126" stop="61626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61148" stop="61857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E599415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61159" stop="61624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61175" stop="61711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467641" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61197" stop="61825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61197" stop="61672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210575" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCCAAATCAGGTGATGGCTCAACAGCCTCATGGTGGTGGTGTTGCAGTAGCTGCTGGAAATCTGGGTAATGTTGGAAATATGGGGAATGATAATTTGATAAGGCAAGGAGGGGTTAATATGAACGGGGCGGGTAATATTGTTGCTGGAGTTGGGGTCGCTAGTGGTGGAGGAGGAGGTGGTGGCGGCGGTGGTGCGACAATTCTTTTTGTTGGTGATTTGCATTGGTGGACCACAGATGCTGAGCTGGAAGCTGAGCTGAGCAAGTATGGACACGTGAAGGAGGTGAAATTTTTTGAAGAAAAAGCTAGTGGGAAGTCTAAAGGATATTGCCAGGTTGAGTTTCATGATTCCTCAGCTGCCACAGCTTGCAAGGAAAGTATGAATGGACATATGTTCAATGGGCGACCATGTGTAGTCGCTTATGCATCATCACCGTATAATGTGAAGAGGATGGGTGAGGCTCAGGTGAATCGAAATCAGCAGGTGGCTCAAACTGCTGTTCCCCAAGCAAGGCGGGGGCCTGGTGAAGCTGCTGGTAAAATTGGAAATAACAACACTCCTACTGGTGGCAATTATCAAGGCGGCGGTGGTGGTGGGGATGGCAACAGGGGGGGTTATGGTAGAGGCAGTTGGGGTAGAGGAGGTCCTCAAGCTATGGGAAATCGGGGGCCTGTAGGTCCTATGAGAAACAGGCCTGGTGGGATTGCAGGTAGGGGTATGATGGGTAACGGTGGAGGTGGATTTGGACAAGGTATGGGTGGTGCACCTCCTATTATGCATCCTCAAACAATGATGGGTCAAGGCTTTGATCCTGCTTTTGGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTTCCTGGTGGTCCAGCTCCACCATTTCCTGGTATGTTGTCATCTTTTCCACCTGTTGGAGGAGTTGGGATGCCTGGAGTAGCTCCGCATGTAAATCCTGCATTCTTTGGTAGAGGAATGCCAATGAATGGTATGGGAATGATGCCAGGCGCTGGTATGGAGGGGCCTAACATGGGGATGTGGTCAGAACCTAATGCGGGTGGATGGGCTGGTGACGAGCACGGTGGTAGAGCAGGAGAGTCAAGTTATGCAGAAGAAGCTGGGTCTGATCATCAGTATGGAGAAACAACTCACGATAGAGGGGCTTGGCCAAATAATGTGAAAGAGAAAGACAGAGGATCAGAGCGTGATTGGTCTGGTTCTACAGATAGAAAACATAGAGAAGGCAGAGAACCATCCTATGATAGAGACATGGCTCGTGAAAAGGATCGGGGCCACGACCAGGATTGGCCAGAGAAAAGATACCGCGATGATAGAGATGTCGCACGAGACAGAGAGAGGGACCGGGATCATGAACGTCCTAGAGAACGAGGGCGTGATCGCGAGAGGGATCGTGATCGTCATAGGGATGATAGAGATAGATATGCTGATCATCACAGGTACAAGGACCGTGAGCAAGAATATGATGATGAAGACAGAGGAAGATCATCAAGAGGACACAGCAAATCACGATTATCACATGAGGAAGACCATCGGTCAAGATCAAGGGATGCTGATTATGGAAAGAGGCGGCGTATAATGTCCGAGTGATCTGTGGCTTGGCTCCTTATTTTCAAGGGTACTTCACAATGAGATCGATTAGTAGCTAATCTACTGAGGGTTTACCATGTGTATCCAGGCTTTCTACTGGGAGGCTTCCTTTTCT</gDNA_template>
            <first_frame> V  P  N  Q  V  M  A  Q  Q  P  H  G  G  G  V  A  V  A  A  G  N  L  G  N  V  G  N  M  G  N  D  N  L  I  R  Q  G  G  V  N  M  N  G  A  G  N  I  V  A  G  V  G  V  A  S  G  G  G  G  G  G  G  G  G  G  A  T  I  L  F  V  G  D  L  H  W  W  T  T  D  A  E  L  E  A  E  L  S  K  Y  G  H  V  K  E  V  K  F  F  E  E  K  A  S  G  K  S  K  G  Y  C  Q  V  E  F  H  D  S  S  A  A  T  A  C  K  E  S  M  N  G  H  M  F  N  G  R  P  C  V  V  A  Y  A  S  S  P  Y  N  V  K  R  M  G  E  A  Q  V  N  R  N  Q  Q  V  A  Q  T  A  V  P  Q  A  R  R  G  P  G  E  A  A  G  K  I  G  N  N  N  T  P  T  G  G  N  Y  Q  G  G  G  G  G  G  D  G  N  R  G  G  Y  G  R  G  S  W  G  R  G  G  P  Q  A  M  G  N  R  G  P  V  G  P  M  R  N  R  P  G  G  I  A  G  R  G  M  M  G  N  G  G  G  G  F  G  Q  G  M  G  G  A  P  P  I  M  H  P  Q  T  M  M  G  Q  G  F  D  P  A  F  G  G  P  M  G  R  M  G  G  Y  G  G  F  P  G  G  P  A  P  P  F  P  G  M  L  S  S  F  P  P  V  G  G  V  G  M  P  G  V  A  P  H  V  N  P  A  F  F  G  R  G  M  P  M  N  G  M  G  M  M  P  G  A  G  M  E  G  P  N  M  G  M  W  S  E  P  N  A  G  G  W  A  G  D  E  H  G  G  R  A  G  E  S  S  Y  A  E  E  A  G  S  D  H  Q  Y  G  E  T  T  H  D  R  G  A  W  P  N  N  V  K  E  K  D  R  G  S  E  R  D  W  S  G  S  T  D  R  K  H  R  E  G  R  E  P  S  Y  D  R  D  M  A  R  E  K  D  R  G  H  D  Q  D  W  P  E  K  R  Y  R  D  D  R  D  V  A  R  D  R  E  R  D  R  D  H  E  R  P  R  E  R  G  R  D  R  E  R  D  R  D  R  H  R  D  D  R  D  R  Y  A  D  H  H  R  Y  K  D  R  E  Q  E  Y  D  D  E  D  R  G  R  S  S  R  G  H  S  K  S  R  L  S  H  E  E  D  H  R  S  R  S  R  D  A  D  Y  G  K  R  R  R  I  M  S  E  *  S  V  A  W  L  L  I  F  K  G  T  S  Q  *  D  R  L  V  A  N  L  L  R  V  Y  H  V  Y  P  G  F  L  L  G  G  F  L  F  </first_frame>
            <second_frame>  F  Q  I  R  *  W  L  N  S  L  M  V  V  V  L  Q  *  L  L  E  I  W  V  M  L  E  I  W  G  M  I  I  *  *  G  K  E  G  L  I  *  T  G  R  V  I  L  L  L  E  L  G  S  L  V  V  E  E  E  V  V  A  A  V  V  R  Q  F  F  L  L  V  I  C  I  G  G  P  Q  M  L  S  W  K  L  S  *  A  S  M  D  T  *  R  R  *  N  F  L  K  K  K  L  V  G  S  L  K  D  I  A  R  L  S  F  M  I  P  Q  L  P  Q  L  A  R  K  V  *  M  D  I  C  S  M  G  D  H  V  *  S  L  M  H  H  H  R  I  M  *  R  G  W  V  R  L  R  *  I  E  I  S  R  W  L  K  L  L  F  P  K  Q  G  G  G  L  V  K  L  L  V  K  L  E  I  T  T  L  L  L  V  A  I  I  K  A  A  V  V  V  G  M  A  T  G  G  V  M  V  E  A  V  G  V  E  E  V  L  K  L  W  E  I  G  G  L  *  V  L  *  E  T  G  L  V  G  L  Q  V  G  V  *  W  V  T  V  E  V  D  L  D  K  V  W  V  V  H  L  L  L  C  I  L  K  Q  *  W  V  K  A  L  I  L  L  L  E  G  L  W  G  E  W  V  V  M  E  D  F  L  V  V  Q  L  H  H  F  L  V  C  C  H  L  F  H  L  L  E  E  L  G  C  L  E  *  L  R  M  *  I  L  H  S  L  V  E  E  C  Q  *  M  V  W  E  *  C  Q  A  L  V  W  R  G  L  T  W  G  C  G  Q  N  L  M  R  V  D  G  L  V  T  S  T  V  V  E  Q  E  S  Q  V  M  Q  K  K  L  G  L  I  I  S  M  E  K  Q  L  T  I  E  G  L  G  Q  I  M  *  K  R  K  T  E  D  Q  S  V  I  G  L  V  L  Q  I  E  N  I  E  K  A  E  N  H  P  M  I  E  T  W  L  V  K  R  I  G  A  T  T  R  I  G  Q  R  K  D  T  A  M  I  E  M  S  H  E  T  E  R  G  T  G  I  M  N  V  L  E  N  E  G  V  I  A  R  G  I  V  I  V  I  G  M  I  E  I  D  M  L  I  I  T  G  T  R  T  V  S  K  N  M  M  M  K  T  E  E  D  H  Q  E  D  T  A  N  H  D  Y  H  M  R  K  T  I  G  Q  D  Q  G  M  L  I  M  E  R  G  G  V  *  C  P  S  D  L  W  L  G  S  L  F  S  R  V  L  H  N  E  I  D  *  *  L  I  Y  *  G  F  T  M  C  I  Q  A  F  Y  W  E  A  S  F  S </second_frame>
            <third_frame>   S  K  S  G  D  G  S  T  A  S  W  W  W  C  C  S  S  C  W  K  S  G  *  C  W  K  Y  G  E  *  *  F  D  K  A  R  R  G  *  Y  E  R  G  G  *  Y  C  C  W  S  W  G  R  *  W  W  R  R  R  W  W  R  R  W  C  D  N  S  F  C  W  *  F  A  L  V  D  H  R  C  *  A  G  S  *  A  E  Q  V  W  T  R  E  G  G  E  I  F  *  R  K  S  *  W  E  V  *  R  I  L  P  G  *  V  S  *  F  L  S  C  H  S  L  Q  G  K  Y  E  W  T  Y  V  Q  W  A  T  M  C  S  R  L  C  I  I  T  V  *  C  E  E  D  G  *  G  S  G  E  S  K  S  A  G  G  S  N  C  C  S  P  S  K  A  G  A  W  *  S  C  W  *  N  W  K  *  Q  H  S  Y  W  W  Q  L  S  R  R  R  W  W  W  G  W  Q  Q  G  G  L  W  *  R  Q  L  G  *  R  R  S  S  S  Y  G  K  S  G  A  C  R  S  Y  E  K  Q  A  W  W  D  C  R  *  G  Y  D  G  *  R  W  R  W  I  W  T  R  Y  G  W  C  T  S  Y  Y  A  S  S  N  N  D  G  S  R  L  *  S  C  F  W  R  A  Y  G  E  N  G  W  L  W  R  I  S  W  W  S  S  S  T  I  S  W  Y  V  V  I  F  S  T  C  W  R  S  W  D  A  W  S  S  S  A  C  K  S  C  I  L  W  *  R  N  A  N  E  W  Y  G  N  D  A  R  R  W  Y  G  G  A  *  H  G  D  V  V  R  T  *  C  G  W  M  G  W  *  R  A  R  W  *  S  R  R  V  K  L  C  R  R  S  W  V  *  S  S  V  W  R  N  N  S  R  *  R  G  L  A  K  *  C  E  R  E  R  Q  R  I  R  A  *  L  V  W  F  Y  R  *  K  T  *  R  R  Q  R  T  I  L  *  *  R  H  G  S  *  K  G  S  G  P  R  P  G  L  A  R  E  K  I  P  R  *  *  R  C  R  T  R  Q  R  E  G  P  G  S  *  T  S  *  R  T  R  A  *  S  R  E  G  S  *  S  S  *  G  *  *  R  *  I  C  *  S  S  Q  V  Q  G  P  *  A  R  I  *  *  *  R  Q  R  K  I  I  K  R  T  Q  Q  I  T  I  I  T  *  G  R  P  S  V  K  I  K  G  C  *  L  W  K  E  A  A  Y  N  V  R  V  I  C  G  L  A  P  Y  F  Q  G  Y  F  T  M  R  S  I  S  S  *  S  T  E  G  L  P  C  V  S  R  L  S  T  G  R  L  P  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0001N06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60135" stop="61742"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1605</number_coding_nucleotides>
                  <number_encoded_amino_acids>535</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPNQVMAQQPHGGGVAVAAGNLGNVGNMGNDNLIRQGGVNMNGAGNIVAGVGVASGGGGGGGGGGATILFVGDLHWWTTDAELEAELSKYGHVKEVKFFEEKASGKSKGYCQVEFHDSSAATACKESMNGHMFNGRPCVVAYASSPYNVKRMGEAQVNRNQQVAQTAVPQARRGPGEAAGKIGNNNTPTGGNYQGGGGGGDGNRGGYGRGSWGRGGPQAMGNRGPVGPMRNRPGGIAGRGMMGNGGGGFGQGMGGAPPIMHPQTMMGQGFDPAFGGPMGRMGGYGGFPGGPAPPFPGMLSSFPPVGGVGMPGVAPHVNPAFFGRGMPMNGMGMMPGAGMEGPNMGMWSEPNAGGWAGDEHGGRAGESSYAEEAGSDHQYGETTHDRGAWPNNVKEKDRGSERDWSGSTDRKHREGREPSYDRDMAREKDRGHDQDWPEKRYRDDRDVARDRERDRDHERPRERGRDRERDRDRHRDDRDRYADHHRYKDREQEYDDEDRGRSSRGHSKSRLSHEEDHRSRSRDADYGKRRRIMSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 51 chains have been computed
$ 
$ memory statistics:
$ 64896 bytes spliced alignments in total
$ 32 spliced alignments have been stored
$ 2028 bytes was the average size of a spliced alignment
$ 12552 bytes predicted gene locations in total
$ 6 predicted gene locations have been stored
$ 2092 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 57 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-03 20:40:16
-->
