<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-02-20 09:02:08"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E314940" ref_strand="+" ref_description="SGN-E314940 [cTOA-31-C11]">
      <seq>tgaaccatagaatttattagtaacactaatggagcgcgggaaatcttcagctgttgctcgaagtcggttatcggtaatcacagctcatctcgccgccgattactccgcctcctcccatggtctggaaacttcctctgtatctgcaccaaccgctgccgtgtcgccgccgcctaatctgaaaggcgccttgacaatcattgatgagaggaccggtaagaagtatcaggttccggttaccgaggaaggaactgttaaagctaccgactttaagaaaatatctactggatacaatgataagggtctcaagctttatgatccgggctatctcaacctgcancccgttcgttcatcaatatgttacatagatggtgatgcagggattctcaggtatcgaggttacccgattgaagagttggctgagagaagttccttcttagaagtggcttatctttnaatgtatggtaatttaccatctgagaaaccattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="1323" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1023" g_stop="750" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="749" i_stop="650" i_length="100">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="649" g_stop="469" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="455" r_length="181" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="468" i_stop="242" i_length="227">
            <donor d_prob="0.795" d_score="0.98"/>
            <acceptor a_prob="0.961" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="241" g_stop="209" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="488" r_length="33" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E314940" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1023" e_stop="750"/>
          <exon e_start="649" e_stop="469"/>
          <exon e_start="241" e_stop="209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACCATAGAATTTATTAGTAACACTAATGGAGCGCGGGAAATCTTCAGCTGTTGCTCGAAGTCGGTTATCGGTAATCACAGCTCATCTCGCCGCCGATTACTCCGCCTCCTCCCATGGTCTGGAAACTTCCTCTGTATCTGCACCAACCGCTGCCGTGTCGCCGCCGCCTAATCTGAAAGGCGCCTTGACAATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAAGGAACTGTTAAAGCTACCGACTTTAAGAAAGTAAGCTTCTATGCTTGTTTGCGTCGTGTAGTTAGTACTATTTGTTTTGATTATTATTTTATTTTTTTTATATATACTGTAATTGTTATTTGTTATATAGATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCA-CCCGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCTTAGAAGTGGCTTATCTTTTAAGTAAGTGTTAATAATGAAATTTACTTCATCAGATTCTTAAGCCTCACTTCTAATGCATCATTGGATTTCTTCAACTGCTTTTTGTAAATACCAGTCAATGTTCTTGTTATCTTGAAATGAGTTCGTTGCTCTGAAGGTTCTGCTTCAGAAGCTGGTTTATGTTACTTCACAGTTTTGATTCATAAGATGGTTCATATTTTATCAATGGCGTTACGTGAATTATGCAGTGTATGGTAATTTACCATCTGAGAACCAATTAT</genome_strand>
        <mrna_strand>TGAACCATAGAATTTATTAGTAACACTAATGGAGCGCGGGAAATCTTCAGCTGTTGCTCGAAGTCGGTTATCGGTAATCACAGCTCATCTCGCCGCCGATTACTCCGCCTCCTCCCATGGTCTGGAAACTTCCTCTGTATCTGCACCAACCGCTGCCGTGTCGCCGCCGCCTAATCTGAAAGGCGCCTTGACAATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAAGGAACTGTTAAAGCTACCGACTTTAAGAAA....................................................................................................ATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAAC-CTGCANCCCGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCTTAGAAGTGGCTTATCTTTNAA...................................................................................................................................................................................................................................TGTATGGTAATTTACCATCTGAGAAACCATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E394622" ref_strand="+" ref_description="SGN-E394622 [TUS-42-G1]">
      <seq>ctgccgtgtcgccccctcctaatctgaaaggcgccttgacaatcattgatgagaggaccggtaagaagtatcaggttccggttaccgaggaaggaactgttaaagctaccgactttaagaaaatatctactggatacaatgataagggtctcaagctttatgatccgggctatctcaacactgcacccgttcgttcatcaatatgttacatagatggtgatgcagggattctcaggtatcgaggttacccgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="1171" stop="218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="871" g_stop="750" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="749" i_stop="650" i_length="100">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="649" g_stop="518" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="254" r_length="132" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E394622" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>254</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="871" e_stop="750"/>
          <exon e_start="649" e_stop="518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCGTGTCGCCGCCGCCTAATCTGAAAGGCGCCTTGACAATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAAGGAACTGTTAAAGCTACCGACTTTAAGAAAGTAAGCTTCTATGCTTGTTTGCGTCGTGTAGTTAGTACTATTTGTTTTGATTATTATTTTATTTTTTTTATATATACTGTAATTGTTATTTGTTATATAGATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACCCGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATT</genome_strand>
        <mrna_strand>CTGCCGTGTCGCCCCCTCCTAATCTGAAAGGCGCCTTGACAATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAAGGAACTGTTAAAGCTACCGACTTTAAGAAA....................................................................................................ATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACCCGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E369928" ref_strand="-" ref_description="SGN-E369928 [TUS-26-B19]">
      <seq>gattgcgctaaaggtgattgagcatgtagcagatcctgctggattctgcaaatcattatcagcgttgaccattcctggtggtgctacagtgatatcaacgattaatcgttcaatgagagcatatgcaacggcaattgttgcagcagagtatctcctacattggcttccaaaaggtacacatcaatggtcaagctttctaaccccagaagaactagtcctcattcttcagcgcgcttctatatcggtgcaagagatggctggatttgtgtacaaccctttgacgggtcgctggtccttgtccgatgacatcagtgttaatttcatcgctttcggaacaaaatcagccaagaaggatgaaactctagattaagttacgatatagctgtcaattttattctgctgttaatctcttaacccattctgtatgtaatctctttttcagttttgttggatgatgaatgcaatttctatatgttagaatatgaacatccacatcacaagttcttaacttgaatgaaaatgtaccatttcgaaatttcaaatacatgtgtattatctttgattgataaaatttgtaacttcataaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="2644" stop="899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2342" g_stop="2193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="163" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2192" i_stop="1728" i_length="465">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1727" g_stop="1647" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="244" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1646" i_stop="1542" i_length="105">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1541" g_stop="1204" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="582" r_length="338" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="583" polyA_stop="607"/>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E369928" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369928" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="2342" e_stop="2193"/>
          <exon e_start="1727" e_stop="1647"/>
          <exon e_start="1541" e_stop="1204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGGGTAAATATATTTAGTGGATCTTCTAAATTGTATTGGTAATTTTTGGTTGATGCCTTGCAAAACTTAAATGATATTTGTGCATGTGAGATTTGCTAGTTCACTTTGAACAAATAGAGGAAGGTGTATGAAAGGTGTGTCTAGATAGTTCTATGTATTGTTATTCTCTCGCACAAATCGAACTTCCAATTTATGTTGGAGCATTTAATTTGATTCAAATTTGATTATGCTTCAAAGTATTCCAATTACGTTTTGAGGACTCATTTTGCTCTATTTGTTAGGATTCATCTCGATGATATATACTAGCATTATCTGTACATAATAGCAGCCATGTCAAAAGGCAATTTTCTACTAATTGTTGTGTTCTTGTCAGCCATGCTTCCTATGTCTCTGTGTGTGTGTTTCTTGCATTTCTTTTTGGAGGGTTGTACAATTGCAAATTGCTAATGTTATAACTGGACTTTACAGCTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTCTTCAGCGCGCTTCTATATCGGCAAGTGGATTAAACATGCTTCTCTGTTTTTCACCTGTATCTTAATCAAGTCAATATCTATCTGTTTGCGCCCATTTGAAACAGTAATCTTTCTGCATTTTACAGGTGCAAGAGATGGCTGGATTTGTGTACAACCCTTTGACGGGTCGCTGGTCCTTGTCCGATGACATCAGTGTTAATTTCATCGCTTTCGGAACAAAATCAGCCAAGAAGGATGAAACTCTAGATTAAGTTACGATATAGCTGTCAATTTTATTCTGCTGTTAATCTCTTAACCCATTCTGTATGTAATCTCTTTTTCAGTTTTGTTGGATGATGAATGCAATTTCTATATGTTAGAATATGAACATCCACATCACAAGTTCTTAACTTGAATGAAAATGTACCATTTCGAAATTTCAAATACATGTGTATTATCTTTGATTGATAAAATTTGTAACTTC</genome_strand>
        <mrna_strand>GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTCTTCAGCGCGCTTCTATATCG.........................................................................................................GTGCAAGAGATGGCTGGATTTGTGTACAACCCTTTGACGGGTCGCTGGTCCTTGTCCGATGACATCAGTGTTAATTTCATCGCTTTCGGAACAAAATCAGCCAAGAAGGATGAAACTCTAGATTAAGTTACGATATAGCTGTCAATTTTATTCTGCTGTTAATCTCTTAACCCATTCTGTATGTAATCTCTTTTTCAGTTTTGTTGGATGATGAATGCAATTTCTATATGTTAGAATATGAACATCCACATCACAAGTTCTTAACTTGAATGAAAATGTACCATTTCGAAATTTCAAATACATGTGTATTATCTTTGATTGATAAAATTTGTAACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E261419" ref_strand="+" ref_description="SGN-E261419 [cLEG-57-J19]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatcggtgcacaacagctgaaagcctggttgaagaacagagacaattcgatgctgtgattgcgctagaggtgattgagcatgtagcagatcctgctggattctgcaaatcattatcagcgttgaccattcctggtggtgctacagtgatatcaacgattaatcgttcaatgagagcatatgcaacggcaattgttgcagcagagtatctcctacattggcttccaaaaggtacacatcaatggtcaagctttctaaccccagaagaactagtcctcattcttcagcgcgcttctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="1351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="422" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="500" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4271" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="549" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4270" i_stop="3117" i_length="1154">
            <donor d_prob="0.852" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3116" g_stop="3067" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="599" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3066" i_stop="2343" i_length="724">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2342" g_stop="2193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="749" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="2192" i_stop="1728" i_length="465">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="1727" g_stop="1651" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="826" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E261419" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4271"/>
          <exon e_start="3116" e_stop="3067"/>
          <exon e_start="2342" e_stop="2193"/>
          <exon e_start="1727" e_stop="1651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGGTACATGCCATACTTGTTTGATGAGAATTTAGTCCAAATATTGGTGACTTCTATATGTGCATGTTAATCTTTCATCTCGATGTACAATGAACAGACATTATCTTTTCTTTTTTATCATGTTGGTGCCTTCTTTAGTAAAGAATAGGAAAACGAGTCTGCATAACATCGGTTTTTGTTATGAATCATGTTAATGATCAAGCACTGGTTTAATCATGCTCAACTTATCAAATAGAAATGAATTTTTGGCATCTTAGCAAAGCCTCACTTTCTTTCCAAAATAGTTGAAGTGACAGATGACCAACTTGTTGTATGTTATTGCAATCTCCATTTGCAATTTTTATTTGTTGTAGTTCCAATTTAAGCTGCAATAGTGTGAAATTACTGCCGTTTAGTTGCATGAACCATAACAGAGACTCCTAGGGTAATTCATGGTCAATTATTATCACTGGTTAACCTCCTCCTCCTTTATGGAGAGTATGGAAGGTGGGTAATTGGTCATGATTGCATACTAATTAGTTGCAGCTTCATGATAATTCAGCTTTGTAGTTGTTATAACCCCTAATTTCCGTTTTCACTCAACTGTGTGGTTGGTTATTTTCTCGCTGTGAAAACTTAGCTGAATTATCATGTGTTCAATGATTGGAACTGTTTTTGGACTTGCAAAAATATCAGTGTGTGAGATTCCTGGTGAAAAAAAAGATATGTGCTTTGATGATTTTGTGGTGAACTTAGTTGCTTCTGTGTCTGTGATTTAGATTCTTTAGACTCTTTTCTTTGTAGTTATGTCCTCTTTCCTGGAAAAAAAACATATCCATCTCATTTTATAGTAGAAAAAAGACCTTTTTCAAGACAACTTGTGCCTAATTAAGTTACATACCAGCTACTTAAAATGTTAAAGGAAATCATGAATCAAGCTCAAGTGTTTTAGTTATATGGAGATTAGTCTATGTCACAAGGACATGGAATTTTTAATGATTTTGTTCTTGTTTATGTTGTTACGTACTTTTCAGCTATGGTGTATAACAATTTTAGCTATTGACACATCTGTTGATTTGAAGAAAAACGAATTCTCTTGTTTTATTTAAAATCTCAATTTAGTTGAATATCAAAGATTGTTCTTCGAAGAATGACCCTATTGAATGTTATGTCGACAGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAGGTATGACTTAATAAGTGATAAGCTAACTTTGTTCAAAGATTTATTATCTTCAGTACAATCCATCTGTTTTAGTAGATTGTACTTATATCATTTGTACCTTTTGCTTTGCAAAACTTCCACTATTTATTTGAAGTTAACATAGTACATTGTATAAAAGGCTTGGTCCTTTAAGCAGTTCTATGCTTTTATAGCTTTGTTGCACTTGCTCAAGTCTAATAACTGGCACCCAGGGGTGTGGTCTAGAGGTCAATGGAGTGGGTGAAAACCTTGGAGAGTAGGAGTCAAATCCTAACAAATACCACAATGCTAGGTGATTTCTTTCTATTTGCTGAAGCCTTTGTGGGCAGAGTTACCTGATTCATGTGCTGGTGAAAGGTTGCAGGTACCCGTTGGAATAATCTAGGTCCTCTTGTAAAAGGTAGCAGGTATCTGTTAGAAAAGTCAAGGTCCGCGCAAGCTTACCTGACCATCTTTTAGAAAGTCTAGTAATTGGAGGCTTTTAGAGCTCTCACAGGTCTGTTACACAGGGACAGATACTGACACAGATGGAGGGATGTATGTGATATGATCTCTTCTAGTATGTGTATCTAAGGAATTCTGACTGGTGATGTAAAAATGTAACAACTGGGGCAATATCGAAGTATTCTAATCTCCCCTCTTAAGAGGACCCAACTTCCGATCTGATCTCTTCTAGTATGTGTATCTTATTCTGCCTCTTTTGTAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGGGTAAATATATTTAGTGGATCTTCTAAATTGTATTGGTAATTTTTGGTTGATGCCTTGCAAAACTTAAATGATATTTGTGCATGTGAGATTTGCTAGTTCACTTTGAACAAATAGAGGAAGGTGTATGAAAGGTGTGTCTAGATAGTTCTATGTATTGTTATTCTCTCGCACAAATCGAACTTCCAATTTATGTTGGAGCATTTAATTTGATTCAAATTTGATTATGCTTCAAAGTATTCCAATTACGTTTTGAGGACTCATTTTGCTCTATTTGTTAGGATTCATCTCGATGATATATACTAGCATTATCTGTACATAATAGCAGCCATGTCAAAAGGCAATTTTCTACTAATTGTTGTGTTCTTGTCAGCCATGCTTCCTATGTCTCTGTGTGTGTGTTTCTTGCATTTCTTTTTGGAGGGTTGTACAATTGCAAATTGCTAATGTTATAACTGGACTTTACAGCTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTCTTCAGCGCGCTTCTAT</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTCTTCAGCGCGCTTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E703179" ref_strand="+" ref_description="SGN-E703179 [FA20DB05]">
      <seq>ctcgttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacattgcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatcggtgcacaacagctgaaagcctggttgaagaacagagacaattcgatgctgtgattgcgctagaggtgattgagcatgtagcagatcctgctggattctgcaaatcattatcagcgttgaccattcctggtggtgctacagtgatatcaacgattaatcgttcaatgagagcatatgcaacggcaattgttgcagcagagtatctcctacattggcttccaaaaggtacacatcaatggtcaagctttctaaccccagaagaactagtcctcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7630" stop="1367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7330" g_stop="7074" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="347" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="426" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="504" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4271" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="553" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4270" i_stop="3117" i_length="1154">
            <donor d_prob="0.852" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3116" g_stop="3067" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="603" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3066" i_stop="2343" i_length="724">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2342" g_stop="2193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="753" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="2192" i_stop="1728" i_length="465">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="1727" g_stop="1667" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="814" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E703179" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7330" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4271"/>
          <exon e_start="3116" e_stop="3067"/>
          <exon e_start="2342" e_stop="2193"/>
          <exon e_start="1727" e_stop="1667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGGTACATGCCATACTTGTTTGATGAGAATTTAGTCCAAATATTGGTGACTTCTATATGTGCATGTTAATCTTTCATCTCGATGTACAATGAACAGACATTATCTTTTCTTTTTTATCATGTTGGTGCCTTCTTTAGTAAAGAATAGGAAAACGAGTCTGCATAACATCGGTTTTTGTTATGAATCATGTTAATGATCAAGCACTGGTTTAATCATGCTCAACTTATCAAATAGAAATGAATTTTTGGCATCTTAGCAAAGCCTCACTTTCTTTCCAAAATAGTTGAAGTGACAGATGACCAACTTGTTGTATGTTATTGCAATCTCCATTTGCAATTTTTATTTGTTGTAGTTCCAATTTAAGCTGCAATAGTGTGAAATTACTGCCGTTTAGTTGCATGAACCATAACAGAGACTCCTAGGGTAATTCATGGTCAATTATTATCACTGGTTAACCTCCTCCTCCTTTATGGAGAGTATGGAAGGTGGGTAATTGGTCATGATTGCATACTAATTAGTTGCAGCTTCATGATAATTCAGCTTTGTAGTTGTTATAACCCCTAATTTCCGTTTTCACTCAACTGTGTGGTTGGTTATTTTCTCGCTGTGAAAACTTAGCTGAATTATCATGTGTTCAATGATTGGAACTGTTTTTGGACTTGCAAAAATATCAGTGTGTGAGATTCCTGGTGAAAAAAAAGATATGTGCTTTGATGATTTTGTGGTGAACTTAGTTGCTTCTGTGTCTGTGATTTAGATTCTTTAGACTCTTTTCTTTGTAGTTATGTCCTCTTTCCTGGAAAAAAAACATATCCATCTCATTTTATAGTAGAAAAAAGACCTTTTTCAAGACAACTTGTGCCTAATTAAGTTACATACCAGCTACTTAAAATGTTAAAGGAAATCATGAATCAAGCTCAAGTGTTTTAGTTATATGGAGATTAGTCTATGTCACAAGGACATGGAATTTTTAATGATTTTGTTCTTGTTTATGTTGTTACGTACTTTTCAGCTATGGTGTATAACAATTTTAGCTATTGACACATCTGTTGATTTGAAGAAAAACGAATTCTCTTGTTTTATTTAAAATCTCAATTTAGTTGAATATCAAAGATTGTTCTTCGAAGAATGACCCTATTGAATGTTATGTCGACAGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAGGTATGACTTAATAAGTGATAAGCTAACTTTGTTCAAAGATTTATTATCTTCAGTACAATCCATCTGTTTTAGTAGATTGTACTTATATCATTTGTACCTTTTGCTTTGCAAAACTTCCACTATTTATTTGAAGTTAACATAGTACATTGTATAAAAGGCTTGGTCCTTTAAGCAGTTCTATGCTTTTATAGCTTTGTTGCACTTGCTCAAGTCTAATAACTGGCACCCAGGGGTGTGGTCTAGAGGTCAATGGAGTGGGTGAAAACCTTGGAGAGTAGGAGTCAAATCCTAACAAATACCACAATGCTAGGTGATTTCTTTCTATTTGCTGAAGCCTTTGTGGGCAGAGTTACCTGATTCATGTGCTGGTGAAAGGTTGCAGGTACCCGTTGGAATAATCTAGGTCCTCTTGTAAAAGGTAGCAGGTATCTGTTAGAAAAGTCAAGGTCCGCGCAAGCTTACCTGACCATCTTTTAGAAAGTCTAGTAATTGGAGGCTTTTAGAGCTCTCACAGGTCTGTTACACAGGGACAGATACTGACACAGATGGAGGGATGTATGTGATATGATCTCTTCTAGTATGTGTATCTAAGGAATTCTGACTGGTGATGTAAAAATGTAACAACTGGGGCAATATCGAAGTATTCTAATCTCCCCTCTTAAGAGGACCCAACTTCCGATCTGATCTCTTCTAGTATGTGTATCTTATTCTGCCTCTTTTGTAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGGGTAAATATATTTAGTGGATCTTCTAAATTGTATTGGTAATTTTTGGTTGATGCCTTGCAAAACTTAAATGATATTTGTGCATGTGAGATTTGCTAGTTCACTTTGAACAAATAGAGGAAGGTGTATGAAAGGTGTGTCTAGATAGTTCTATGTATTGTTATTCTCTCGCACAAATCGAACTTCCAATTTATGTTGGAGCATTTAATTTGATTCAAATTTGATTATGCTTCAAAGTATTCCAATTACGTTTTGAGGACTCATTTTGCTCTATTTGTTAGGATTCATCTCGATGATATATACTAGCATTATCTGTACATAATAGCAGCCATGTCAAAAGGCAATTTTCTACTAATTGTTGTGTTCTTGTCAGCCATGCTTCCTATGTCTCTGTGTGTGTGTTTCTTGCATTTCTTTTTGGAGGGTTGTACAATTGCAAATTGCTAATGTTATAACTGGACTTTACAGCTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTC</genome_strand>
        <mrna_strand>CTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATTGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E717802" ref_strand="+" ref_description="SGN-E717802 [FC02DB06]">
      <seq>gggcgattggcggccaatcggccgaattgatggcttcgaagctcgttttgtaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatcggtgcacaacagctgaaagcctggttgaagaacagagacaattcgatgctgtgattgcgctagaggtgattgagcatgtagcagatcctgctggattctgcaaatcattatcagcgttgaccattcctggtggtgctacagtgatatcaacgattaatcgttcaatgagagcatatgcaacggcaattgttgcagcagagtatctcctacattggcttccaaaaggtacacatcaatggtcaagctttctaacccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7645" stop="1387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7342" g_stop="7074" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="298" r_length="269" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="388" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="467" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="545" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4271" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="594" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4270" i_stop="3117" i_length="1154">
            <donor d_prob="0.852" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3116" g_stop="3067" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="644" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3066" i_stop="2343" i_length="724">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2342" g_stop="2193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="794" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="2192" i_stop="1728" i_length="465">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="1727" g_stop="1687" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="795" r_stop="835" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E717802" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717802" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7342" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4271"/>
          <exon e_start="3116" e_stop="3067"/>
          <exon e_start="2342" e_stop="2193"/>
          <exon e_start="1727" e_stop="1687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCTTCGAAGCTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGGTACATGCCATACTTGTTTGATGAGAATTTAGTCCAAATATTGGTGACTTCTATATGTGCATGTTAATCTTTCATCTCGATGTACAATGAACAGACATTATCTTTTCTTTTTTATCATGTTGGTGCCTTCTTTAGTAAAGAATAGGAAAACGAGTCTGCATAACATCGGTTTTTGTTATGAATCATGTTAATGATCAAGCACTGGTTTAATCATGCTCAACTTATCAAATAGAAATGAATTTTTGGCATCTTAGCAAAGCCTCACTTTCTTTCCAAAATAGTTGAAGTGACAGATGACCAACTTGTTGTATGTTATTGCAATCTCCATTTGCAATTTTTATTTGTTGTAGTTCCAATTTAAGCTGCAATAGTGTGAAATTACTGCCGTTTAGTTGCATGAACCATAACAGAGACTCCTAGGGTAATTCATGGTCAATTATTATCACTGGTTAACCTCCTCCTCCTTTATGGAGAGTATGGAAGGTGGGTAATTGGTCATGATTGCATACTAATTAGTTGCAGCTTCATGATAATTCAGCTTTGTAGTTGTTATAACCCCTAATTTCCGTTTTCACTCAACTGTGTGGTTGGTTATTTTCTCGCTGTGAAAACTTAGCTGAATTATCATGTGTTCAATGATTGGAACTGTTTTTGGACTTGCAAAAATATCAGTGTGTGAGATTCCTGGTGAAAAAAAAGATATGTGCTTTGATGATTTTGTGGTGAACTTAGTTGCTTCTGTGTCTGTGATTTAGATTCTTTAGACTCTTTTCTTTGTAGTTATGTCCTCTTTCCTGGAAAAAAAACATATCCATCTCATTTTATAGTAGAAAAAAGACCTTTTTCAAGACAACTTGTGCCTAATTAAGTTACATACCAGCTACTTAAAATGTTAAAGGAAATCATGAATCAAGCTCAAGTGTTTTAGTTATATGGAGATTAGTCTATGTCACAAGGACATGGAATTTTTAATGATTTTGTTCTTGTTTATGTTGTTACGTACTTTTCAGCTATGGTGTATAACAATTTTAGCTATTGACACATCTGTTGATTTGAAGAAAAACGAATTCTCTTGTTTTATTTAAAATCTCAATTTAGTTGAATATCAAAGATTGTTCTTCGAAGAATGACCCTATTGAATGTTATGTCGACAGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAGGTATGACTTAATAAGTGATAAGCTAACTTTGTTCAAAGATTTATTATCTTCAGTACAATCCATCTGTTTTAGTAGATTGTACTTATATCATTTGTACCTTTTGCTTTGCAAAACTTCCACTATTTATTTGAAGTTAACATAGTACATTGTATAAAAGGCTTGGTCCTTTAAGCAGTTCTATGCTTTTATAGCTTTGTTGCACTTGCTCAAGTCTAATAACTGGCACCCAGGGGTGTGGTCTAGAGGTCAATGGAGTGGGTGAAAACCTTGGAGAGTAGGAGTCAAATCCTAACAAATACCACAATGCTAGGTGATTTCTTTCTATTTGCTGAAGCCTTTGTGGGCAGAGTTACCTGATTCATGTGCTGGTGAAAGGTTGCAGGTACCCGTTGGAATAATCTAGGTCCTCTTGTAAAAGGTAGCAGGTATCTGTTAGAAAAGTCAAGGTCCGCGCAAGCTTACCTGACCATCTTTTAGAAAGTCTAGTAATTGGAGGCTTTTAGAGCTCTCACAGGTCTGTTACACAGGGACAGATACTGACACAGATGGAGGGATGTATGTGATATGATCTCTTCTAGTATGTGTATCTAAGGAATTCTGACTGGTGATGTAAAAATGTAACAACTGGGGCAATATCGAAGTATTCTAATCTCCCCTCTTAAGAGGACCCAACTTCCGATCTGATCTCTTCTAGTATGTGTATCTTATTCTGCCTCTTTTGTAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGGGTAAATATATTTAGTGGATCTTCTAAATTGTATTGGTAATTTTTGGTTGATGCCTTGCAAAACTTAAATGATATTTGTGCATGTGAGATTTGCTAGTTCACTTTGAACAAATAGAGGAAGGTGTATGAAAGGTGTGTCTAGATAGTTCTATGTATTGTTATTCTCTCGCACAAATCGAACTTCCAATTTATGTTGGAGCATTTAATTTGATTCAAATTTGATTATGCTTCAAAGTATTCCAATTACGTTTTGAGGACTCATTTTGCTCTATTTGTTAGGATTCATCTCGATGATATATACTAGCATTATCTGTACATAATAGCAGCCATGTCAAAAGGCAATTTTCTACTAATTGTTGTGTTCTTGTCAGCCATGCTTCCTATGTCTCTGTGTGTGTGTTTCTTGCATTTCTTTTTGGAGGGTTGTACAATTGCAAATTGCTAATGTTATAACTGGACTTTACAGCTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCC</genome_strand>
        <mrna_strand>ATGGCTTCGAAGCTCGTTTTGTACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E699647" ref_strand="+" ref_description="SGN-E699647 [FA10DB12]">
      <seq>catttttcttcatggcttcgaagctcgttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatcggtgcacaacagctgaaagcctggttgaagaacagagacaattcgatgctgtgattgcgctagaggtgattgagcatgtagcagatcctgctggattctgcaaatcattatcagcgttgaccattcctggtggtgctacagtgatatcaacgattaatcgttcaatgagagcatatgcaacggcaattgttgcagcagagtatctcctacattggcttccaaaaggtacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7653" stop="1891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7353" g_stop="7074" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="370" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="449" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="527" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4271" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="576" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4270" i_stop="3117" i_length="1154">
            <donor d_prob="0.852" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3116" g_stop="3067" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="626" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3066" i_stop="2343" i_length="724">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2342" g_stop="2193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="776" r_length="150" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E699647" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699647" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7353" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4271"/>
          <exon e_start="3116" e_stop="3067"/>
          <exon e_start="2342" e_stop="2193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTTCTTCATGGCTTCGAAGCTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGGTACATGCCATACTTGTTTGATGAGAATTTAGTCCAAATATTGGTGACTTCTATATGTGCATGTTAATCTTTCATCTCGATGTACAATGAACAGACATTATCTTTTCTTTTTTATCATGTTGGTGCCTTCTTTAGTAAAGAATAGGAAAACGAGTCTGCATAACATCGGTTTTTGTTATGAATCATGTTAATGATCAAGCACTGGTTTAATCATGCTCAACTTATCAAATAGAAATGAATTTTTGGCATCTTAGCAAAGCCTCACTTTCTTTCCAAAATAGTTGAAGTGACAGATGACCAACTTGTTGTATGTTATTGCAATCTCCATTTGCAATTTTTATTTGTTGTAGTTCCAATTTAAGCTGCAATAGTGTGAAATTACTGCCGTTTAGTTGCATGAACCATAACAGAGACTCCTAGGGTAATTCATGGTCAATTATTATCACTGGTTAACCTCCTCCTCCTTTATGGAGAGTATGGAAGGTGGGTAATTGGTCATGATTGCATACTAATTAGTTGCAGCTTCATGATAATTCAGCTTTGTAGTTGTTATAACCCCTAATTTCCGTTTTCACTCAACTGTGTGGTTGGTTATTTTCTCGCTGTGAAAACTTAGCTGAATTATCATGTGTTCAATGATTGGAACTGTTTTTGGACTTGCAAAAATATCAGTGTGTGAGATTCCTGGTGAAAAAAAAGATATGTGCTTTGATGATTTTGTGGTGAACTTAGTTGCTTCTGTGTCTGTGATTTAGATTCTTTAGACTCTTTTCTTTGTAGTTATGTCCTCTTTCCTGGAAAAAAAACATATCCATCTCATTTTATAGTAGAAAAAAGACCTTTTTCAAGACAACTTGTGCCTAATTAAGTTACATACCAGCTACTTAAAATGTTAAAGGAAATCATGAATCAAGCTCAAGTGTTTTAGTTATATGGAGATTAGTCTATGTCACAAGGACATGGAATTTTTAATGATTTTGTTCTTGTTTATGTTGTTACGTACTTTTCAGCTATGGTGTATAACAATTTTAGCTATTGACACATCTGTTGATTTGAAGAAAAACGAATTCTCTTGTTTTATTTAAAATCTCAATTTAGTTGAATATCAAAGATTGTTCTTCGAAGAATGACCCTATTGAATGTTATGTCGACAGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAGGTATGACTTAATAAGTGATAAGCTAACTTTGTTCAAAGATTTATTATCTTCAGTACAATCCATCTGTTTTAGTAGATTGTACTTATATCATTTGTACCTTTTGCTTTGCAAAACTTCCACTATTTATTTGAAGTTAACATAGTACATTGTATAAAAGGCTTGGTCCTTTAAGCAGTTCTATGCTTTTATAGCTTTGTTGCACTTGCTCAAGTCTAATAACTGGCACCCAGGGGTGTGGTCTAGAGGTCAATGGAGTGGGTGAAAACCTTGGAGAGTAGGAGTCAAATCCTAACAAATACCACAATGCTAGGTGATTTCTTTCTATTTGCTGAAGCCTTTGTGGGCAGAGTTACCTGATTCATGTGCTGGTGAAAGGTTGCAGGTACCCGTTGGAATAATCTAGGTCCTCTTGTAAAAGGTAGCAGGTATCTGTTAGAAAAGTCAAGGTCCGCGCAAGCTTACCTGACCATCTTTTAGAAAGTCTAGTAATTGGAGGCTTTTAGAGCTCTCACAGGTCTGTTACACAGGGACAGATACTGACACAGATGGAGGGATGTATGTGATATGATCTCTTCTAGTATGTGTATCTAAGGAATTCTGACTGGTGATGTAAAAATGTAACAACTGGGGCAATATCGAAGTATTCTAATCTCCCCTCTTAAGAGGACCCAACTTCCGATCTGATCTCTTCTAGTATGTGTATCTTATTCTGCCTCTTTTGTAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG</genome_strand>
        <mrna_strand>CATTTTTCTTCATGGCTTCGAAGCTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E369929" ref_strand="+" ref_description="SGN-E369929 [TUS-26-B19]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatcggtgcacaacagctgaaagcctggttgaagaacagagacaattcgatgctgtgattgcgctagaggtgattgagcatgtagcagatcctgctggattctgcaaatcattatcagcgttgaccattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="1980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="422" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="500" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4271" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="549" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4270" i_stop="3117" i_length="1154">
            <donor d_prob="0.852" d_score="1.00"/>
            <acceptor a_prob="0.751" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3116" g_stop="3067" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="599" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3066" i_stop="2343" i_length="724">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2342" g_stop="2280" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="662" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E369929" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4271"/>
          <exon e_start="3116" e_stop="3067"/>
          <exon e_start="2342" e_stop="2280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTGGTACATGCCATACTTGTTTGATGAGAATTTAGTCCAAATATTGGTGACTTCTATATGTGCATGTTAATCTTTCATCTCGATGTACAATGAACAGACATTATCTTTTCTTTTTTATCATGTTGGTGCCTTCTTTAGTAAAGAATAGGAAAACGAGTCTGCATAACATCGGTTTTTGTTATGAATCATGTTAATGATCAAGCACTGGTTTAATCATGCTCAACTTATCAAATAGAAATGAATTTTTGGCATCTTAGCAAAGCCTCACTTTCTTTCCAAAATAGTTGAAGTGACAGATGACCAACTTGTTGTATGTTATTGCAATCTCCATTTGCAATTTTTATTTGTTGTAGTTCCAATTTAAGCTGCAATAGTGTGAAATTACTGCCGTTTAGTTGCATGAACCATAACAGAGACTCCTAGGGTAATTCATGGTCAATTATTATCACTGGTTAACCTCCTCCTCCTTTATGGAGAGTATGGAAGGTGGGTAATTGGTCATGATTGCATACTAATTAGTTGCAGCTTCATGATAATTCAGCTTTGTAGTTGTTATAACCCCTAATTTCCGTTTTCACTCAACTGTGTGGTTGGTTATTTTCTCGCTGTGAAAACTTAGCTGAATTATCATGTGTTCAATGATTGGAACTGTTTTTGGACTTGCAAAAATATCAGTGTGTGAGATTCCTGGTGAAAAAAAAGATATGTGCTTTGATGATTTTGTGGTGAACTTAGTTGCTTCTGTGTCTGTGATTTAGATTCTTTAGACTCTTTTCTTTGTAGTTATGTCCTCTTTCCTGGAAAAAAAACATATCCATCTCATTTTATAGTAGAAAAAAGACCTTTTTCAAGACAACTTGTGCCTAATTAAGTTACATACCAGCTACTTAAAATGTTAAAGGAAATCATGAATCAAGCTCAAGTGTTTTAGTTATATGGAGATTAGTCTATGTCACAAGGACATGGAATTTTTAATGATTTTGTTCTTGTTTATGTTGTTACGTACTTTTCAGCTATGGTGTATAACAATTTTAGCTATTGACACATCTGTTGATTTGAAGAAAAACGAATTCTCTTGTTTTATTTAAAATCTCAATTTAGTTGAATATCAAAGATTGTTCTTCGAAGAATGACCCTATTGAATGTTATGTCGACAGAAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAGGTATGACTTAATAAGTGATAAGCTAACTTTGTTCAAAGATTTATTATCTTCAGTACAATCCATCTGTTTTAGTAGATTGTACTTATATCATTTGTACCTTTTGCTTTGCAAAACTTCCACTATTTATTTGAAGTTAACATAGTACATTGTATAAAAGGCTTGGTCCTTTAAGCAGTTCTATGCTTTTATAGCTTTGTTGCACTTGCTCAAGTCTAATAACTGGCACCCAGGGGTGTGGTCTAGAGGTCAATGGAGTGGGTGAAAACCTTGGAGAGTAGGAGTCAAATCCTAACAAATACCACAATGCTAGGTGATTTCTTTCTATTTGCTGAAGCCTTTGTGGGCAGAGTTACCTGATTCATGTGCTGGTGAAAGGTTGCAGGTACCCGTTGGAATAATCTAGGTCCTCTTGTAAAAGGTAGCAGGTATCTGTTAGAAAAGTCAAGGTCCGCGCAAGCTTACCTGACCATCTTTTAGAAAGTCTAGTAATTGGAGGCTTTTAGAGCTCTCACAGGTCTGTTACACAGGGACAGATACTGACACAGATGGAGGGATGTATGTGATATGATCTCTTCTAGTATGTGTATCTAAGGAATTCTGACTGGTGATGTAAAAATGTAACAACTGGGGCAATATCGAAGTATTCTAATCTCCCCTCTTAAGAGGACCCAACTTCCGATCTGATCTCTTCTAGTATGTGTATCTTATTCTGCCTCTTTTGTAGGTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCT</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E255315" ref_strand="+" ref_description="SGN-E255315 [cLEG-30-O1]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgatgaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="3985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="422" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="500" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4285" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="535" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E255315" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATCG</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATGAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E259067" ref_strand="+" ref_description="SGN-E259067 [cLEG-41-I10]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="3986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="422" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="500" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4286" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="534" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E259067" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATATC</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E257868" ref_strand="+" ref_description="SGN-E257868 [cLEG-39-L3]">
      <seq>acccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctgagccaactccgataaatcctccaccaccacctactccatcccctaatacttctacaacaacttcaagtgctctcaatgaatttgaactcgccaaattctgtgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattatatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatattaagattgctcgccttcatgcggatttggatccacaaacttcttcaattgaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7557" stop="3987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7257" g_stop="7074" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="274" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="353" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="431" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4319" g_stop="4287" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="464" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E257868" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7257" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
          <exon e_start="4319" e_stop="4287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCGGTATGTTTACTTGAATGTTTCCAGGATGCACCATTAAACTGCTGTTTTTTTTTTTGCTTGTCTGGTTAATGTACAGTTTAAGGATCTTCCCATACCTGAGATATCATGAGTATTGGCATCAAAATTTACTAGTCTTATATTGATTCGGAGTTTATTGGTTCCTCACCTTGAGGGACACATACAATTTTGCTTCGTCAAATTATAGTTCATTTGAAGGTCACAGTGCTTATGATGGAAGAAAAGTTAAAAATTTAGAAGGGTTTTGAACTGATAACTTGAATGTTCATTGCCTAATTATAGTTAGTCATACTGACAACAAGTGCAAGAAAAAATTCATACGATGTTTATTCATCTTGGTTCAAATCCTACTTAGAGGTCCACTAGAGATAAAAATATGTTGAAGAAACAAGATCTTTCTTTTGATTCCTTTTAGGCAATTTGAAAATTAAAGAAATGGTCAAAGCCTAGGCATCATCGGGTGGAGATGAATCAATAGATTGGGGTTCATTAGGACCAGTGTCTTGTGCTTCCAGGATAGAAATCCTGTTGTTAGTCTCACAGCCGATGTTGTACATTACTACACATTAGAAGGTCCATGGGTTGGCAAGTTACCTATTTAGTAAAGATAGAACTAGACGTTTTGTATAGATTCTGTTATATTTTAAAGAAAATGGCACAGCTCTTTTTGCCTCTTCCACTGTATGAGTTTTCCTTTTTGCACAAACTGGGAACAAGCCAGATAGTTCCTTTATGCTATTGTTTCCCTGCACTCATATATGCTGTGATGTTCTGGAGCTTCACCGACAAAATTTGCACCAAGGCGTTCCCATGGTTGATATACTAAAACCAAAAGGGTGTAAAGTTAAATCATGTTCAAAAGATCGCATTTAAGTTGCAAAAATACCTAATTTTAGTCCATGTGGCTGTGTTGTCTTGGTATTCAATATAATATGTGTAGGATATTAACTCCTGGTATATGTATTCAACCAATATTATTGACTTCCTTAATTTTTTTTATCCAAAAAAATATTTTCAGTATATCCTTATATATATAATATATGTGCTTGTCCTTCCAACAGCCTAAGCAAAACTCTTGAGCCTGTGTCAAAATTTTCAAGGACTATTGTGTCTTTATGCAACAACAGAAGTTCTAGAACCTACTAGAGCATATTCTCTAAAATAATGTTGTTGATGAAGTAGTTGAAGCAATTTCGTAGAACTAATATACTTTCATTATATACAATGGTAGGATTAGCACATATCTCAGCAATAGATTTGCTGTTTGTTAAGCTAGAGTGCTATTTTAAACAGATAGTTTTTGAATTGTGACAGTCAAACCCGTATACATTCTATATGGTGGATGCTTATGAATGCTGATATTTCTTTCAGGATTTGGATCCACAAACTTCTTCAATTGAATAT</genome_strand>
        <mrna_strand>ACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTGAGCCAACTCCGATAAATCCTCCACCACCACCTACTCCATCCCCTAATACTTCTACAACAACTTCAAGTGCTCTCAATGAATTTGAACTCGCCAAATTCTGTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTATATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGATCCACAAACTTCTTCAATTGAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E398088" ref_strand="+" ref_description="SGN-E398088 [TUS-42-J8]">
      <seq>gttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgaatgctgtggacaaaaatattaagattgctcgccttcatgcggatttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7627" stop="5402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7327" g_stop="7074" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="344" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="423" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5709" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="502" r_length="79" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E398088" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E398088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7327" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTG-ATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG</genome_strand>
        <mrna_strand>GTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGAATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E394759" ref_strand="+" ref_description="SGN-E394759 [TUS-42-H7]">
      <seq>gttttgaaccgactgatatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggaattgatgctgtggaacaaaatattaagattgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7627" stop="5420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7327" g_stop="7074" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="344" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="423" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5720" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="490" r_length="67" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E394759" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7327" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTC</genome_strand>
        <mrna_strand>GTTTTGAACCGACTGATATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAATTGATGCTGTGGAACAAAATATTAAGATTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E258901" ref_strand="+" ref_description="SGN-E258901 [cLEG-41-K6]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgagcctttggctcgaatgggagctacggtcacgggagttgatgctgtggacaaaaatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="5430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="422" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5730" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="479" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E258901" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATT</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG..............................................................................................................................................................................................................................CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E370009" ref_strand="+" ref_description="SGN-E370009 [TUS-26-B18]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctgctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagaccttttgaaggactgaagtttgttgatgttggttgtggaggcggaattttatctgaccctttggctcggaggggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="5710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6009" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="422" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5786" g_stop="5767" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="442" r_length="20" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E370009" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6009"/>
          <exon e_start="5786" e_stop="5767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGGTATACATTTGTCAAGCTTAATATTCTATTGGAGTCACCTTTACCTTTGCATATGGCAGAATATTTTTCTCCTGTGATTACCATTATTAGCCTAGTATTTTTCTAAGTGCTATTGTTAGCTTAGTTAGACTTAGACAATGTCTTTGTCACTCAATGAAGTGAATATTTATATTAAGCATGCGGCATATAGTCACACACATCTCATTTTTACTCTTAATTCAGCCTTTGGCTCGAATGGGAGC</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTGCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAC..............................................................................................................................................................................................................................CCTTTGGCTCGGAGGGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E264591" ref_strand="+" ref_description="SGN-E264591 [cLEG-67-L8]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaaggatccaaattgcactagacctttttgaagactgaaagttgttgatgttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="5734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501">
            <donor d_prob="0.373" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6087" g_stop="6034" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="397" r_length="54" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E264591" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264591" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
          <exon e_start="6087" e_stop="6034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGGTAGTATTGAGGATGTAATGTCTGAAAGATTAGATTGCATATAAAGAGTTATCTCATATTTCATTTAGTACTTGTTGGCGTTCTCTATTTTTAGGACCAATGTTTGATGCTTGTATAATAATGTTGGAGTTGAAGAGATTATGTCGCTTGTGTTAGAGAAGGATTTAGCTAGATTTGTTGTTCATATTCTTCTTTTCGCGAACTATACTTATATTTGCTCTTATGAGGGAATTTCATGATTTGAATGGACATTCTTTTGGCCTTTGCTGGTCTGAGACTAGAGGTGGTTGTTAGGAAAGGAATTAATAGTACAGTATGGGAGAAAAGGGGAAAGGAAATGTAATATGAATAGGAGCTTATAAATAGCACTATTGGATAGAGAAGGTAATGGATAAGCAAAAGGAGAGTATAGCTGAGAAAGGATCCAAATTTCCCTAGGAGCTCCACCTTATTTTCACTCTTCTTGCATCTCTGGAGGCTAAAACTTTTGTATTGTATCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGG</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGATCCAAATTGCACTAGACCTTTTTGAAGACTGAAAGTTGTTGATGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E258955" ref_strand="+" ref_description="SGN-E258955 [cLEG-41-N1]">
      <seq>ttttgaaccgactgagatctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctgctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccaaattctctgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctgatgaaccctacaagacttgcttttattaggtccactctttgtcggcacttcagaaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7626" stop="6283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7326" g_stop="7074" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6589" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E258955" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7326" e_stop="7074"/>
          <exon e_start="6678" e_stop="6589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG</genome_strand>
        <mrna_strand>TTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTGCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E442251" ref_strand="+" ref_description="SGN-E442251 [cSTA-32-B5]">
      <seq>ggcttcgaagctcgttctgaaccgactgagatctctctcaagagtctctgaactcagtgacgtccgttttgataaactcagagacccgatttccattttctccacctcacaaaatcatgttacatggcgatcttattccgaagcttctcagccaactgcgataaatactcctccaccacctccattccctaatacttctactactacttcaagttctctcaatgaattcgaacttgccaaattctccgccattgccgaaacctggtgggatgcagaaggaccctttaagccattacatctaatgaaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7640" stop="6334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7340" g_stop="7074" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6678" g_stop="6634" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="309" r_length="45" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E442251" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442251" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7340" e_stop="7074"/>
          <exon e_start="6678" e_stop="6634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTCGAAGCTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTATTTAATTTTCAAAGTTTCCGCAATTTTTTTTTTGGTATTGGAATGAATGGGCTCAAATGGAGTTGAAATGGTTATTGAGGATTCATATAATCGACCTGAACTACTTTGAAATTGAGGCGTAGATACCGATATATATATATATTTAAAAATGTAGTTTTTTCATTGTATTGACATGAGATGAACTAGTATAATTTTTGAATGTCTAAAAGTTTTAAATTTTAAACATATTTCCAATTTAGCTTTGAAATTAGTCATATTAACTCTGTAAGGAAAAATGTCCCATAAATAATGACTGAGGGGGAGTTTTGGAATTGCAATTTTGAATCTTTTTCATTTGATTTGCTTTTCCACTTTGATATACTGAATTCAATTGTGCGCCTGTGCTAAATCAGGTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCC</genome_strand>
        <mrna_strand>GGCTTCGAAGCTCGTTCTGAACCGACTGAGATCTCTCTCAAGAGTCTCTGAACTCAGTGACGTCCGTTTTGATAAACTCAGAGACCCGATTTCCATTTTCTCCACCTCACAAAATCATGTTACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTGCGATAAATACTCCTCCACCA---CCTCCATTCCCTAATACTTCTACTACTACTTCAAGTTCTCTCAATGAATTCGAACTTGCCAAATTCTCCGCCATTGCCGAAACCTG...........................................................................................................................................................................................................................................................................................................................................................................................................GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTAATGAACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E394767" ref_strand="+" ref_description="SGN-E394767 [TUS-42-J7]">
      <seq>gttttgaaccgacccctttctctctgtagagtctctcaactcagcgacgtccgttttgataaactcagagacccggtttccattttctccacctcacaaaatcaggtaacatggcgatcttattccgaagcttctcagccaactccgataaatcctccaccaccacctcctccatcccctaatacttctacaacaacttcaagttctctcaatgaatttgaacttgccgaattctctgccattgccgaaacctggagggatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="7609" stop="6773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7327" g_stop="7074" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E394767" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>254</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7327" e_stop="7074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG</genome_strand>
        <mrna_strand>GTTTTGAACCGACCCCTTTCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCGAATTCTCTGCCATTGCCGAAACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E377580" ref_strand="+" ref_description="SGN-E377580 [TUS-20-L19]">
      <seq>cgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacgatgtctattttaccattggattgtcgtttgtctgtgcctgtggccagattactggtgtttcctactgattttgtttcgttattaataatgcttaacagcttctaatgagtcgatgcaaatcctatcaatttgtaaagtttgtaccatttaaacgtaaaacttatgggtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9959" stop="8517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9659" g_stop="9609" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8817" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="682" r_length="631" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E377580" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9659" e_stop="9609"/>
          <exon e_start="9447" e_stop="8817"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTATCAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGGTCA</genome_strand>
        <mrna_strand>CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTATCAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E375127" ref_strand="+" ref_description="SGN-E375127 [TUS-36-O19]">
      <seq>cgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacgatgtctattttaccattggattgtcgtttgtctgtgcctgtggccagattactggtgtttcctactgattttgtttcgttattaataatgcttaacagcttctaatgagtcgatgcaaatcctatcaatttgtaaagtttgtaccatttaaacgtaaaacttatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9959" stop="8520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9659" g_stop="9609" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8820" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="679" r_length="628" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E375127" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9659" e_stop="9609"/>
          <exon e_start="9447" e_stop="8820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTATCAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGG</genome_strand>
        <mrna_strand>CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTATCAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E232056" ref_strand="+" ref_description="SGN-E232056 [cLED-7-D23]">
      <seq>cgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacgatgtctattttaccattggattgtcgtttgtctgtgcctgtggccagattactggtgtttcctactggatttgtttcgttattaataatgcttaacagcttcttatgagtcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9959" stop="8574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9659" g_stop="9609" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8874" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="625" r_length="574" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E232056" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9659" e_stop="9609"/>
          <exon e_start="9447" e_stop="8874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGA</genome_strand>
        <mrna_strand>CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGGATTTGTTTCGTTATTAATAATGCTTAACAGCTTCTTATGAGTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E238136" ref_strand="+" ref_description="SGN-E238136 [cLED-22-F18]">
      <seq>aacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacgatgtctattttaccattggattgtcgtttgtctgtgcctgtggccagattactggtgtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9977" stop="8626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9677" g_stop="9609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8926" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="591" r_length="522" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E238136" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9677" e_stop="9609"/>
          <exon e_start="9447" e_stop="8926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTC</genome_strand>
        <mrna_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E237886" ref_strand="+" ref_description="SGN-E237886 [cLED-18-L4]">
      <seq>aacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacgatgtctattttaccattggattgtcgtttgtctgtgcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9977" stop="8647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9677" g_stop="9609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8947" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="570" r_length="501" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E237886" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9677" e_stop="9609"/>
          <exon e_start="9447" e_stop="8947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTG</genome_strand>
        <mrna_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E238072" ref_strand="+" ref_description="SGN-E238072 [cLED-22-K19]">
      <seq>aacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacgatgtctattttaccattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9977" stop="8667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9677" g_stop="9609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8967" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="550" r_length="481" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E238072" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9677" e_stop="9609"/>
          <exon e_start="9447" e_stop="8967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGA</genome_strand>
        <mrna_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E390545" ref_strand="+" ref_description="SGN-E390545 [TUS-44-C19]">
      <seq>acgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttanaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataattttttccccacccaatcagccaagtgttactgttacaatgtctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9960" stop="8679"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9660" g_stop="9609" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="8979" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="521" r_length="469" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E390545" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9660" e_stop="9609"/>
          <exon e_start="9447" e_stop="8979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTAT</genome_strand>
        <mrna_strand>ACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTANAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACAATGTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E238224" ref_strand="+" ref_description="SGN-E238224 [cLED-22-G18]">
      <seq>aacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttcttagttaaaatagtctataatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9977" stop="8719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9677" g_stop="9609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="9019" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="498" r_length="429" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E238224" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9677" e_stop="9609"/>
          <exon e_start="9447" e_stop="9019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTT</genome_strand>
        <mrna_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E237493" ref_strand="+" ref_description="SGN-E237493 [cLED-19-E22]">
      <seq>aacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctattttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9977" stop="8745"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9677" g_stop="9609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="9045" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="472" r_length="403" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E237493" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237493" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9677" e_stop="9609"/>
          <exon e_start="9447" e_stop="9045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTC</genome_strand>
        <mrna_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E746743" ref_strand="+" ref_description="SGN-E746743 [GI|27820118]">
      <seq>gtctcagtcttctttgacaaacccccaaagcgccataaaaagagtattcatgaaaattccagtattgtgacttcgcacgcaacatctactcagccagcctccagtcgccattgttatgcccggtatggaagctgagaactcaaacgcctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcgtttgctcacaccaaattggaggaatatggaagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggagaggagctgcatatttggcaatggggaagttcaaagatgcactcaaggattttcaacaggtcaagaaattatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctaaaatttgaagaagctatttctgtcccagaatctcagaggcgttcagtagctgactctattgattatcgttctgtagaggtggagcctcaatatgctggtgcaagaatagagggagatgttgtaacattagattttgtgaagaagatgctggatgacttcaaaaaccagaagaacttgcataagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcactgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattatttgccttcaagtgcatgtgtccatcagctatacacctggcgagaggaaatcacgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccagaagaggggttaatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtgcgatctcatgaagtgaaggatgaaggttatgagattgagcatgacggcaaactcataacggtgttttccgctcccaattattgtgaccagatgggtaacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19170" stop="8750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18870" g_stop="18677" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="364" r_length="170" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="436" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="587" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="696" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="814" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="815" r_stop="962" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="11805" g_stop="11557" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="963" r_stop="1211" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1212" r_stop="1337" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1338" r_stop="1438" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1439" r_stop="1513" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="9447" g_stop="9051" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1514" r_stop="1910" r_length="397" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1911" polyA_stop="1946"/>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E746743" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1910</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18870" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCT</genome_strand>
        <mrna_strand>GTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACACCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E746456" ref_strand="+" ref_description="SGN-E746456 [GI|47104998]">
      <seq>gattcatgaaaattccagtattgtgacttcgcacgcaacatctactcagccagcctccagtcgccattgttatgcccggtatggaagctgagaactcaaacgcctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcgtttgctcacaccaaattggaggaatatggaagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggagaggagctgcatatttggcaatggggaagttcaaagatgcactcaaggattttcaacaggtcaagaaattatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctaaaatttgaagaagctatttctgtcccagaatctcagaggcgttcagtagctgactctattgattatcgttctgtaggatcaggccctggctcatcatatgttcccaccaaaacaactgctgtatcagcggcagcagcactaatgtgagttctggtggtatatatggggactaaggcagccacaatggtggcagcagcagcttcggcagccttattggtggtcttgataacatttctttggggacgttgcagtgatggtttctttaccaagagtcgaacacttgaattagaggtggagcctcaatatgctggtgcaagaatagagggagatgttgtaacattagattttgtgaagaagatgctggatgacttcaaaaaccagaagaacttgcataagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcactgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattatttgccttcaagtgcatgtgtccatcagctatacacctggcgagaggaaatcacgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccagaagaggggttaatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtgcgatctcatgaagtgaaggatgaaggttatgagattgagcatgacggcaaactcataacggtgttttccgctcccaattattgtgaccagatgggtaacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggattgtcctctgtattatttatattcctctttgtaagattgttacacttctcatttcttttagaatgttcaaattgggaaaagctttgataagtcgaattttggttttttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19125" stop="8753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18826" g_stop="18677" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="320" r_length="170" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="392" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="543" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="16550" i_length="973">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16549" g_stop="16337" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="756" r_length="213" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16336" i_stop="14734" i_length="1603">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="757" r_stop="865" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="866" r_stop="983" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="984" r_stop="1131" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="11805" g_stop="11557" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1132" r_stop="1380" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1381" r_stop="1506" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1507" r_stop="1607" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1608" r_stop="1682" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="9447" g_stop="9053" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1683" r_stop="2077" r_length="395" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2078" polyA_stop="2092"/>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E746456" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2077</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18826" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="16549" e_stop="16337"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTT</genome_strand>
        <mrna_strand>GATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACACCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGTGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E589540" ref_strand="-" ref_description="SGN-E589540 [43116]">
      <seq>tagtacatggaggtcttttttagtgtttgatggcngtgaacttctctgatattagagcaattgatcggttttgtgagcccccggaggaggggttaatgtgtgaattgttgtggagtgatccacaaccctcagctcggtagaggacctagtaaacgaggtgttggtctttctttcngggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtccgatctcatgaagtgaaggatgaaggttatgagattgaacatgatggcaaactcataacagtgttttccgctccaaactactgtgaccagatgggtaacaagggtgcttttatacggtttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcccgatgtcaagccaatggcatatgccaacaacttccttcggatgttttcttaaaactctgaaacctaacgttcagtattacaatcgattagaccttttgtcacactgaccaagagcatacgcatcaggaggcagaagagctagtacttacacagccaattagctgcagtgtcattatttggacaacttcctgacttgcccgcagcttctgaggatcctcacctcctttgttttgattaaggtgtaaacacttgtctacaataacaatgtcgtgtggtggattgtcctctgtattgtttatgttcctatttgtaagattgtcacacttctcatttctcttagataatttccaaattgggaagctttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="11943" stop="8783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11643" g_stop="11557" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="0.92"/>
            <acceptor a_prob="0.920" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="218" r_length="128" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="319" r_length="101" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="394" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9447" g_stop="9073" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="769" r_length="375" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E589540" ref_strand="-">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589540" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="11643" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTACATGGAGGTCTT-TTTAGTG-TTGATGGC-GTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAA-CCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTC-GGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTT--ACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGA-ATGTTCAAATTGGGAAAAGCTTTGAT</genome_strand>
        <mrna_strand>TAGTACATGGAGGTCTTTTTTAGTGTTTGATGGCNGTGAACTTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCCTCAGCTCGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCNGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTCCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAACATGATGGCAAACTCATAACAGTGTTTTCCGCTCCAAACTACTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGGTTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCCGATGTCAAGCCAATGGCATATGCCAACAACTTCCTTCGGATGTTTTCTT-AAAACTCTGAAACCTAACGTTCAGTATTACAATCGATTAGACCTTTTGTCACACTGACCAAGAGCATACGCATCAGGAGGCAGAAGAGCTAGTACTTACACAGCCAATTAGCTGCAGTGTCATTATTTGGACAACTTCCTGACTTGCCCGCAGCTTCTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGTGTAAACAC-TTGTCTACAATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTGTTTATGTTCCTATTTGTAAGATTGTCACACTTCTCATTTCTCTTAGATAATTTCCAAATTGG-GAAGCTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E238211" ref_strand="+" ref_description="SGN-E238211 [cLED-22-A16]">
      <seq>aacaagggtgcttttataccatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaaaaactctggaacctaacgttcagtattacaatcgatgcgaccttttgtctgactgaccaagagcatacacatcaggaggcaaaagagctagtacttacagccaattagctgcagtgtcattattcggacaacttcctgacttgcccgcagcatgtgaggatcctcacctcctttgttttgattaaggcgtaaacactttctctacgataacaatgtcgtgtggtggatttgcctctgtattatttatattcctctttgtaagattggtacacttctcatttcttttagaatgttcaaattgggaaaagctttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="9977" stop="8774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9677" g_stop="9609" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9447" g_stop="9074" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="443" r_length="374" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E238211" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9677" e_stop="9609"/>
          <exon e_start="9447" e_stop="9074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGA</genome_strand>
        <mrna_strand>AACAAGGGTGCTTTTATACCATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTTGCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGGTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E558992" ref_strand="-" ref_description="SGN-E558992 [18419]">
      <seq>gtgagcccccggaggagggtataatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtccgatctcatgaagtgaaggatgaaggttatgagattgaacatgatggcaaactcataacagtgttttccgctccaaactactgtgaccagatgggtaacaagggtgcttttatacggtttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcccgatgtcaagccaatggcatatgccaacaacttccttcggatgttttcttaaaactctgaaacctaacgttcagtattacaatcgattagaccttttgtcacactgaccaagagcatacgcatcaggaggcagaagagctagtacttacacagccaattagctgcagtgtcattatttggacaacttcctgacttgcccgcagcttctgaggatcctcacctcctttgttttgattaaggtgtaaacacttgtctacaataacaatgtcgtgtggtggattgtcctctgtattgtttatgttcctatttgtaagattgtcacacttctcatttctcttagataatttccaaattgggaagctttgatacgtcgaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="11345" stop="8783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="144" r_length="126" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="245" r_length="101" r_score="0.931"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="320" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9447" g_stop="9099" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="669" r_length="349" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="702" polyA_stop="720"/>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E558992" ref_strand="-">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558992" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9099"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTT--ACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGA</genome_strand>
        <mrna_strand>GTATAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTCCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAACATGATGGCAAACTCATAACAGTGTTTTCCGCTCCAAACTACTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGGTTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCCGATGTCAAGCCAATGGCATATGCCAACAACTTCCTTCGGATGTTTTCTT-AAAACTCTGAAACCTAACGTTCAGTATTACAATCGATTAGACCTTTTGTCACACTGACCAAGAGCATACGCATCAGGAGGCAGAAGAGCTAGTACTTACACAGCCAATTAGCTGCAGTGTCATTATTTGGACAACTTCCTGACTTGCCCGCAGCTTCTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGTGTAAACAC-TTGTCTACAATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTGTTTATGTTCCTATTTGTAAGATTGTCACACTTCTCATTTCTCTTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E613354" ref_strand="+" ref_description="SGN-E613354 [63127]">
      <seq>ttatgnagaaagtctttgtagtacatgggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccggaggaggggttaatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtccgatctcatgaagtgaaggatgaaggtttcgagatttgaaccatgatggcaaactcataacagtgttttccgctccaaattactgtgaccagatgggtaacaagggtgcttttatacggtttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcccgatgtcaagccaatggcatatgccaacaacttccttcggatgttttcttaaaactctgaaacctaacgttcattattacaatcgatgcgaccttttgtcacactgaccaagagcatacacatcaggaggcagaagagctagtacttacacagccaattagctgcagtgtcattatttgaacaanttcctgacttgcccgcatcttgtgaggatcctcacctcctttgttttgattaaggtgtaaacacttgtctacaataacaatgtcgtgtggtggattgtcctctgtattgtctatgttcctctttgtaacgattgtcacacttctcatttctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="11958" stop="8803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11661" g_stop="11557" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="232" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="335" r_length="103" r_score="0.881"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="410" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9447" g_stop="9102" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="757" r_length="347" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E613354" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E613354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11661" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATGAGAAAGTCTTTGTAGTACAT-GGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGA-TTG-AGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTT--ACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAA-GATTGTTACACTTCTCATTTCTTTT</genome_strand>
        <mrna_strand>TTATGNAGAAAGTCTTTGTAGTACATGGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTCCGATCTCATGAAGTGAAGGATGAAGGTTTCGAGATTTGAACCATGATGGCAAACTCATAACAGTGTTTTCCGCTCCAAATTACTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGGTTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCCGATGTCAAGCCAATGGCATATGCCAACAACTTCCTTCGGATGTTTTCTT-AAAACTCTGAAACCTAACGTTCATTATTACAATCGATGCGACCTTTTGTCACACTGACCAAGAGCATACACATCAGGAGGCAGAAGAGCTAGTACTTACACAGCCAATTAGCTGCAGTGTCATTATTTGAACAANTTCCTGACTTGCCCGCATCTTGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGTGTAAACAC-TTGTCTACAATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTGTCTATGTTCCTCTTTGTAACGATTGTCACACTTCTCATTTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E560254" ref_strand="+" ref_description="SGN-E560254 [19878]">
      <seq>gtgtctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccggaggaggggttaatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagttgtccgatctcatgaagtgaaggatgaaggttatgagattgaacatgatggcaaactcataacagtgttttccgctccaaattactgtgaccagatgggtaacaagggtgcttttatacggtttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcccgatgtcaagccaatggcatatgccaacaacttccttcggatgttttcttaaaactctgaaacctaacgttcattattacaatcgatgtgaccttttgtcacactgaccaagagcatacacatcaggaggcagaagagctagtacttacacagccaattagctgcagtgtcattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="11992" stop="8965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11692" g_stop="11557" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="261" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="362" r_length="101" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="437" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9447" g_stop="9265" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="621" r_length="184" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E560254" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11692" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9265"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTT--ACAGCCAATTAGCTGCAGTGTCATTAT</genome_strand>
        <mrna_strand>GTGT-CTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTTGTCCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAACATGATGGCAAACTCATAACAGTGTTTTCCGCTCCAAATTACTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGGTTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCCGATGTCAAGCCAATGGCATATGCCAACAACTTCCTTCGGATGTTTTCTT-AAAACTCTGAAACCTAACGTTCATTATTACAATCGATGTGACCTTTTGTCACACTGACCAAGAGCATACACATCAGGAGGCAGAAGAGCTAGTACTTACACAGCCAATTAGCTGCAGTGTCATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E592794" ref_strand="+" ref_description="SGN-E592794 [36010]">
      <seq>gaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggcaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccggaggaggggttaatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtccgatctcatgaagtgaaggatgaaggttttgagattgaacatgatggcaaactcataacagtgttttccggtccaaattactgtgaccagatgggtaacaagggtgcttttatacggtttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcccgatgtcaagccaatggcatatgccaacaacttccttcggatgtcttcttaagactctgaaacctaacgttcattattacaatcgatgcgaccttttgtcacactgaccaagagcatacacatcaggaggcagaagagctagtacttacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="12065" stop="8989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11765" g_stop="11557" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="336" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="437" r_length="101" r_score="0.921"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="512" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9447" g_stop="9287" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="672" r_length="160" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E592794" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E592794" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11765" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGG-AGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGC</genome_strand>
        <mrna_strand>GAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGCAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCGGAGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTCCGATCTCATGAAGTGAAGGATGAAGGTTTTGAGATTGAACATGATGGCAAACTCATAACAGTGTTTTCCGGTCCAAATTACTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGGTTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCCGATGTCAAGCCAATGGCATATGCCAACAACTTCCTTCGGATGTCTTCTT-AAGACTCTGAAACCTAACGTTCATTATTACAATCGATGCGACCTTTTGTCACACTGACCAAGAGCATACACATCAGGAGGCAGAAGAGCTAGTACTTACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E747532" ref_strand="+" ref_description="SGN-E747532 [GI|28141003]">
      <seq>atgcccggtatggaagctgagaactcaaacgcctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcgtttgctcacaccaaattggaggaatatggaagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggagaggagctgcatatttggcaatggggaagttcaaagatgcactcaaggattttcaacaggtcaagaaattatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctaaaatttgaagaagctatttctgtcccagaatctcagaggcgttcagtagctgactctattgattatcgttctgtaggatcaggccctggctcatcatatgttcccaccaaaacaactgctgtatcagcggcagcagcactaatgggagttctggtggtatatatggggactaaggcagccacaatggtggcagcagcagcttcggcagccttattggtggtcttgataacatttctttggggacgttgcagtgatggtttctttaccaagagtcgaacacttgaattagaggtggagcctcaatatgctggtgcaagaatagagggagatgttgtaacattagattttgtgaagaagatgctggatgacttcaaaaaccagaagaacttgcataagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcactgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattatttgccttcaagtgcatgtgtccatcagctatacacctggcgagaggaaatcacgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccagaagaggggttaatgtgtgaattgttgtggagtgatccacaacctcagcctggtagaggacctagtaaacgaggtgttggtctttctttcgggggagacgtaactaaaagattcttgcaggaaaataatctagatttagtggtgcgatctcatgaagtgaaggatgaaggttatgagattgagcatgacggcaaactcataacggtgttttccgctcccaattattgtgaccagatgggtaacaagggtgcttttatacgatttgaggctcccgatatgaagccaaatattgtgacattttcagcagtgccacatcctgatgtcaaaccaatggcatatgccaacaacttccttcgcatgttttcttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19055" stop="9088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18755" g_stop="18677" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="249" r_length="170" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="321" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="472" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="16550" i_length="973">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16549" g_stop="16337" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="685" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16336" i_stop="14734" i_length="1603">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="794" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="795" r_stop="912" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="913" r_stop="1060" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="11805" g_stop="11557" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1061" r_stop="1309" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="11043" g_stop="10918" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1310" r_stop="1435" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="10785" g_stop="10685" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1436" r_stop="1536" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="9683" g_stop="9609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1537" r_stop="1611" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="9447" g_stop="9388" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1612" r_stop="1671" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E747532" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18755" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="16549" e_stop="16337"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11557"/>
          <exon e_start="11043" e_stop="10918"/>
          <exon e_start="10785" e_stop="10685"/>
          <exon e_start="9683" e_stop="9609"/>
          <exon e_start="9447" e_stop="9388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGTAAGTTCTGATGCAAGTAGAGAATTGTACATGTATGATGTCCTTTCAATATGCTATATCTATACTAATTATTCTGCTTTAAGCTTCTTAATGCTCCATTAATCGTCTGATAAACTCTTCAAACAAAGCTCGGAAAAACTATTCATGCAAGTTTGTGTATCAGAACTACCATTCTCATTTGCTCGGTAGTTATCATCATTACACATTATTTCTGCAAGCCACTTTCTTGATACATGCTAATAAATACTTTTGAGTCCAGACACGACTATTATTTTGAAATAAAGGCAACTATTCTGGTCTTTATCGATGCTTTTGTTGGCCAAACAAATTGAAACTTTCTGCATTTCTGCTTGATCTCAGTTAGTATTAATGTATTGACTTACTTCTTTGATAAGTCATCATCAGTTTTCTGACTTATTAAATATATGTTGCTTATTTCTTTTTTACCTTGGTCGTACATAATAAACATCACCAAGTTGTTTAGGACCTTAGGTTTCATTTGATCTCTTTCAGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGGTACTAATCTTTTTCTTTCTCCCTTATTCTGTTGTTTGACCATGTAGAGAATTGACATTTCACTGTCTATTTTTATTCACTTAATGGATTTTAGCACAAATATTTGATGTTGACATGTGTGGGTGCTTGCAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGGTAATTTGTCTCTATGTATTCCCCTCTCAAGAGTTTATTTGAGCTCATCCTACTTTAGTTCAATTAAAATCTCAATTTGCAAGTCAAAAGAACACCTTTGCCTCAAAAGTCCCTCTAGGTTGAAATGTAGCTCTTCATCAAAATCACTGCAGAGTTTTCGGTGTGTATAGATCTTGTATATCTGTGATTTGTCGGCACTGTTGTTAAAGGCGTGCTGAAGCGAGGCTCAATACTTGTTGAGCGATTCGCCTCGCCTCGCCTCAATGTCGTCATCAAGGTTCTACGACATGCTTTTCCTTGCGAATGAGCCTCTTCCGAAGAGGCGAGACAGTTGGCATTTCACTTTATCGTAATCTTTTTGTTCATATATTTGTCATTCATGCTATAACTATTAGTCTTGGACTATATATATATATATATATATTGTTTCTCCCTTTGTGCTTTTTCTTCATTAAAGTTTATGCTTTATTTGAGCTTGAAGTCCCAACGGATCTTAGAGGTTTTTTGCTTTTAATGACACTGTTTATCGGTCAAGTTTAGTATTGACACAACTTGTAGTCCGTTGCTTCATTTAGTATTTTAAAATGATGGGAAATAATGACTTTCTGCTTCAAGGTAGATTTGGAATTTGTTAGATGTTGACTTTGTCAGTAACTTCGATAGATGGTGTTGTGGACATATTTGCACAGATGGCGTGGTGTCCAGTTTCATTGCAAGTCTTGTTTCTTAGCATCTAATATATTTTCAAGTACATAAACTGATTGCAATATGTACAGATATAGTCATAATATTTGCTACTTTTTTGTGACAATTTACGTGGACAAGTCAGTTTTATAGTAACTGGAACTGTGTTATCTATACATTTGTATTCCTGTAGTAGAGAAGGATCTTGTAATAATTTCTTTGTATGACTAATACACTGTTATATCCTATATGAAGTTTCTTTGATGTGAATGGAAATGTTTTATTCAATATCCTCAAATGCACTTCGCTGGTTGCAGATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGGTTAGTGACTTTTATCTTGAAATGACCTTTTACTCCTTGATAATTAACACTTTTATTCTCATCTCCTTTAATGGGTTGCCTCATGAGTTGTTTTTACCATGTTATCATCATAACACTGTAGATTAACTCTTGTCATCTTCATTGCGTTGCCTCGTATGCAGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAA</genome_strand>
        <mrna_strand>ATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACACCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG....................................................................................................................................ATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG.................................................................................................................................................................CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E273782" ref_strand="+" ref_description="SGN-E273782 [cLEN-7-L11]">
      <seq>agacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattatttgccttcaagtgcatgtgtccatcagctatacacctggcgagaggaaatcacgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccagaagaggggttaatgtgtgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="13062" stop="11251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12762" g_stop="12662" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11805" g_stop="11557" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="350" r_length="249" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E273782" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>350</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12762" e_stop="12662"/>
          <exon e_start="11805" e_stop="11557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG</genome_strand>
        <mrna_strand>AGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E585255" ref_strand="+" ref_description="SGN-E585255 [66975]">
      <seq>tgctgccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccatagaggtggagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaatttacacaagaggtatgcctaccaaatcgtactgcaaacaagagaaatgttgcgagcattgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattattcgccttcaagtgcatgtgtccatcagctatacaccttgcgagaggaaatcatgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttgggccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="17944" stop="11265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17644" g_stop="17523" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.92"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="231" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="349" r_length="118" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="497" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.814" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11805" g_stop="11564" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="739" r_length="242" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E585255" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17644" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCA</genome_strand>
        <mrna_strand>TGCTGCCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTACACAAGAG.................................................................................GTATGCCTACCAAATCGTACTGCAAACAAGAGAAATGTTGCGAGCATTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTCGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTTGCGAGAGGAAATCATGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGGCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E486371" ref_strand="+" ref_description="SGN-E486371 [cSTE-21-P24]">
      <seq>tgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcgttccgtagaggtagagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaatttacacaagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcattgccctcccttgttgacattgttgttcccgcagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattattcgccttcaagtgcatgtgtccatcagctatacaccttgcgagaggaaatcatgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatcggttttgtgagcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="17900" stop="11266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17600" g_stop="17523" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="187" r_length="109" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="305" r_length="118" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="453" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.814" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11805" g_stop="11566" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="693" r_length="240" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E486371" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E486371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17600" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCC</genome_strand>
        <mrna_strand>TGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCGTTCCGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTACACAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCATTGCCCTCCCTTGTTGACATTGTTGTTCCCGCAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTCGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTTGCGAGAGGAAATCATGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E306449" ref_strand="+" ref_description="SGN-E306449 [cLEX-13-E21]">
      <seq>tgacttcaaaaaccagaagaacttgcataagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcactgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacattatttgccttcaagtgcatgtgtccatcagctatacacctggcgagaggaaatcacgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatgtcataaatgagaaagtctttgtagtacatggaggtctttttagtgttgatggcgtgaagctctctgatattagagcaattgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="14957" stop="11281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14657" g_stop="14625" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="151" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="299" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11805" g_stop="11581" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="524" r_length="225" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E306449" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14657" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATC</genome_strand>
        <mrna_strand>TGACTTCAAAAACCAGAAGAACTTGCATAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E483300" ref_strand="+" ref_description="SGN-E483300 [cSTE-8-F18]">
      <seq>ggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcgttccgtagaggtagagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaatttacacaagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcattgccctcccttgttgacattgttgttcccgcagggaagcacttcactgtatgtggtgatgtacatggtcagttctatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattatgctgatagagggtctttctctctagaggtcatattgacattattcgccttcaagtgcatgtgtccatcagctatacaccttgcgagaggaaatcatgaaagcaagagcatgaacaaaatatatgggtttgagggcgaggtcagatccaagttaagtgaaatatttgtggaactctttgcagaagtgttctgttgcttacctttggcccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="18600" stop="11365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18300" g_stop="18266" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="186" r_length="151" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="295" r_length="109" r_score="0.945"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="413" r_length="118" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.954" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="561" r_length="148" r_score="0.973"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.814" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11805" g_stop="11665" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="702" r_length="141" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E483300" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E483300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18300" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATG</genome_strand>
        <mrna_strand>GGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCGTTCCGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTACACAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCATTGCCCTCCCTTGTTGACATTGTTGTTCCCGCAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTATGCTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTCGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTTGCGAGAGGAAATCATGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E268448" ref_strand="+" ref_description="SGN-E268448 [cLEI-13-H22]">
      <seq>aaattatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctaaaatgtgaagaagctatttctgtcccagaatctcagaggcgttcagtagctgactctattgattatcgttctgtagaggtggagcctcaatatgctggtgcaagaatagagggagatgttgtaacattagattttgtgaagaagatgctggatgacttcaaaaaccagaagaacttgcataagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcactgccctcccttgttgacattggtgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccggatctgttcaatggtgattttgttgatagagggtctttctctctagaggtcatattgacgttatttgccttcaagtgcatgtgtccatcagctatacacctggcgagaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="17967" stop="11484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17667" g_stop="17523" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="254" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="372" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12809" g_stop="12662" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="520" r_length="148" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.814" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11805" g_stop="11784" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="542" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E268448" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17667" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12662"/>
          <exon e_start="11805" e_stop="11784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGGTAGATCGCCTGCTCTTTTCATCTTCAATGTTGCAAGTGTGTTCTTTTATATTATTACTCCTACCTAGTATTCTTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTTTTCCAGTACCCTATTTTTTACCTTAGTTATCTGTTTGTGTTAGTATTTATTTGCCTTTACTCATTCTAGTTCTATCTCTTTTATTAATTCATGCATCAATTATACCTAACAAGTAAGTGAATGTCCTAGTATTGGTTGGGTGGAACTTGAAGGTTTTCTGGATGCAAGTCCAGTCCCCTATTTTTTACCTTAGTGATCTGTTTGAGTTAGTATTCATTTGCCTTTACTCATTTTCTGTTACTATCTCTTTATTTTTAAATTTGTAATTCAATTATACCTAACAAGTTAGTGAATGTCCGTTTTGGATCCCTTTTAGATGTAAGCTGTTTGATCATTGCTCATTTTCCTTTACTCATTTTCTTTTTCTCTCTCTTCTTTGTTTGTACATCAATTAGACCTAACAAGAAAATGAATGTCCCTTTTTGGTCACTTTTCGATGTAAGCTGTTTGAGTCATTTTTCTTTTTCCATTTCCTATTTCTATTCTTTTTTATTTGTACATCAATTAGACCTAACAGTGAATGTTCCTTTTGGGTCCCATTTAGATCTAAGTGGTGTGTTAATGCTTTTATTTGAGATTCTGATATTGCAATATATCAATCTCTAATCAAAGCTAAGATTTTGATTCCTTCTATACTAGCACGACCTAAAAAGTAGCGTGTTTTATTTTTCTTCCAATTATTCAGTCGGTGTGTAGATGTTGTTCAGATGGGTCAATTGTATCTTGCTAACAACTTTAGTTTTTCAGCTATACACCTGGCGAGAGGAAA</genome_strand>
        <mrna_strand>AAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATGTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGGTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGGATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACGTTATTTGCCTTCAAGTGCATGTGTCCATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACACCTGGCGAGAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E441118" ref_strand="+" ref_description="SGN-E441118 [cSTA-29-A8]">
      <seq>gtccaaacgacccagatgctgccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccatagaggtggagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaatttacacaagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcattgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctcctaaatattttcgagctcaatgggcttccatcagaagacaatccgtatctgttcaatggtgattatgttgatagagggtctttctctctagaggtcatattgacatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="17960" stop="12390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17660" g_stop="17523" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.92"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="247" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="365" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12809" g_stop="12690" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="485" r_length="120" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E441118" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E441118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17660" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
          <exon e_start="12809" e_stop="12690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAGGTAATGATATCCTGATGACGGATGCCTTTTTATAGCTTGTAGCTGTTATTTTTATCATTTGCTTGTCCTTTTTTTTCTCCTCCAGTTTCATTTCACCCCTCTAGAACAAGATTTTACGTCAGCATATGGTATTGACTAAGGCATGCATTTATAGAAGGCGTAGAACTATCTGGTGCTTGCTAGTGATGCTCCTACATGCAAGAATAACTAAAACAAAAAATTCTTGTTTCTTTAAAAAATTGCTGCTTGGTTCACTGATCTATTTGGAGAAACATAAAGGTTGATTCCTTTTGTCAGAAAAAAAGAGGGATGTTAGTGGCTTTTAGACGTCTTTAACCTGTAAGCAATTTGAAGGCGCTGGAACCTTTTTAAAGATCGTGGGCATGTTCCCTTTGTCGTATTTCTCCTTTTCGCCCCTCCCTAATTAAAGAATATGGTTCCTTTTGAGCTGAAATATTACTGCTATGCCATTTAGTTCGTAAGGCCTATCATACATATCTGAACCGCAGGCCCTTCCTCTTGTACTTCTCTTCCCACTTGTGAAACATCTCAGTCCCCTTCTTCACTGGAATCTGAGTTTGGATTTGTCTGATGATGCACTCGCCCACCATAAGCCTTTTCTCCCTACTTTAGGAAGCATTTTCACCTTCCCTTTAACCAGACTAGGACCTTCATATTTGGAATGCACTTTTTTTCCATTCAAGAGGAATGGTATAAAATAAAAGCTCTTGAACTTTATTGCGTTAGGAGCTGTGAAGGTCTGAAGGAGTCTGTATTTAGACTCTAAGTATCATGAACCTCCTATCCAGCTTCAATCTTGTGTCTTCTTCAACTTCGATTAACACTGGCCTGTTTCCAGAAATCCTCAGAAGCTCTGGCTCAGAACTGAACTGGCAAGGCAACCAGTCTAATCCAGACTGTATCCAACACCAACCCTGAGTGTCTGCCCGACCAGTGAGTTACTCCATACTTTTGAAACACCATCTTTGCTTGGTCTGATGGCCCGCGCCTCCTTCTGAGAGGAATTTAAGAAACCCCTCTACCTTTGAACGGTTGACAACCATGTGGATTAACCCACTTCTAGACCAATTTGATCTTCGGTTGTTTTAGGCTCTTCCCCAATCAATGTACCAAAAACCTCTATATAAAGTGTTAGCTTTTTCTCACGATACGCCCTCAACCTCCATCTCTTGCTATCCCTTGCTTTCTTTATCGGAGTTGCCAGCGGTTGTTAATATGACCAATTTGAGCAGAGTTTTGGATAACCCCTTTTACATGTACCCAAGTTTTATGAATGGAATTTTGACTTGCTTCTGTCATTGTCAAGCTAACTGGAGAACTCTTGACCAGAAAAATACGAAAGGGTAAGATTTAGTAAAGTAATTGTTTTTTCTGGTTTAATTAAGGAGCAAATCCTAAAGAACACTTGTTTGACTTTAGATATGTGCTGCAAGATATATCATTTAGTCCTTTATTCTCTCTTTCCTGCTGTTTATATATAGTGATAATACAATTTGCTGGTTCTATTTCTGTGCTTGGCGGAATGACTTGCTTCTTTTTGCCAGCTATAAGTCTCTACTGGCTGAACTGTTGTTCATCTTCTAATGTTGCTACAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTA</genome_strand>
        <mrna_strand>GTCCAAACGACCCAGATGCTGCCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTACACAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCATTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTATGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E737986" ref_strand="+" ref_description="SGN-E737986 [LC11DG03]">
      <seq>gcccggtatggaagctgagaactcaaacgcctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcgtttgctcactccaaattggaggaatatggaagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggagaggagctgcatatttggcaatggggaagttcaaagatgcactcaaggattttcaacaggtcaagaaattatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctaaaatttgaagaagctatttctgtcccagaatctcagaggcgttcagtagctgactctattgattatcgttctgtagaggtggagcctcaatatgctggtgcaagaatagagggagatgttgtaacattagattttgtgaagaagatgctggatgacttcaaaaaccagaagaacttgcataagaggtatgcctaccaaatagtactgcaaacaagagaaatgttgcgagcactgccctcccttgttgacattgttgttcccgaagggaagcacttcactgtatgtggtgatgtacatggtcagttttatgacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19053" stop="14124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18753" g_stop="18677" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="247" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="319" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="470" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="579" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14543" g_stop="14426" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="697" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E737986" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737986" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18753" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG</genome_strand>
        <mrna_strand>GCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG.................................................................................GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E487109" ref_strand="+" ref_description="SGN-E487109 [cSTE-24-C12]">
      <seq>ctttagcaaagtctcagtcttctttgacaaacccccaaagcgccataaaaagagtgttcatgaaaattccagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattctcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcacagcaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctgccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccatagaggtggagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaatttacacaagaggtatgcctaccaaatcgtactgcaaacaagagaaatgttgcgagcattgcccctcccttgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19180" stop="14182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18880" g_stop="18677" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="374" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="446" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="597" r_length="151" r_score="0.954"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.92"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="706" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14543" g_stop="14482" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="769" r_length="63" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E487109" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18880" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTAGCAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTG-CCCTCCCTTGTTG</genome_strand>
        <mrna_strand>CTTTAGCAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTGTTCATGAAAATTCCAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCTCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACAGCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTGCCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTACACAAGAG.................................................................................GTATGCCTACCAAATCGTACTGCAAACAAGAGAAATGTTGCGAGCATTGCCCCTCCCTTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E453866" ref_strand="+" ref_description="SGN-E453866 [cSTS-21-M2]">
      <seq>aaaagagtgttcatgaaaattctagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacgagcaattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcacaccaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccgtagaggtagagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaaagaatttacacaagagtatgcctaccaaatagtactgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19133" stop="14219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18833" g_stop="18677" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="327" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="399" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="550" r_length="151" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.94"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="659" r_length="109" r_score="0.917"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14543" g_stop="14519" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="684" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E453866" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18833" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAG-AAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACTGCAA</genome_strand>
        <mrna_strand>AAAAGAGTGTTCATGAAAATTCTAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACGAGCAATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACACCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAAGAATTTACACAAGA-.................................................................................GTATGCCTACCAAATAGTACTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E485250" ref_strand="+" ref_description="SGN-E485250 [cSTE-17-M17]">
      <seq>ccaaagcgccataaaaagagtgttcatgaaaattccagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattctcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcacagcaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctgccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccatagaggtggagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaatttacacaagaagtatgcctaccaaatcgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19146" stop="14320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18846" g_stop="18677" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="340" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="412" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="563" r_length="151" r_score="0.954"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.92"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="672" r_length="109" r_score="0.945"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14543" g_stop="14523" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="673" r_stop="693" r_length="21" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E485250" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18846" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTACT</genome_strand>
        <mrna_strand>CCAAAGCGCCATAAAAAGAGTGTTCATGAAAATTCCAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCTCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACAGCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTGCCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTACACAAGAA.................................................................................GTATGCCTACCAAATCGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E604137" ref_strand="+" ref_description="SGN-E604137 [67329]">
      <seq>caaagtctcagtcttctttgacaaacccccaaagcgccataaaaagagtgttcatgaaaattctagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacgagcaattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcacaccaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccgtagaggtagagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaattacacaagaggtattgctaccaaatagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19174" stop="14316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18874" g_stop="18677" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="368" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="440" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="591" r_length="151" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.94"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14625" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="699" r_length="108" r_score="0.945"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14543" g_stop="14525" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="700" r_stop="718" r_length="19" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E604137" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18874" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14625"/>
          <exon e_start="14543" e_stop="14525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGTTTCGTTTGAATGGTGTAATCTTCTCTTTATTTTTGAAACACTCTTAATCTTTCAACATTTGCTCTATTTTGACAGGTATGCCTACCAAATAGTA</genome_strand>
        <mrna_strand>CAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTGTTCATGAAAATTCTAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACGAGCAATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACACCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAA-TTACACAAGAG.................................................................................GTATTGCTACCAAATAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E467507" ref_strand="+" ref_description="SGN-E467507 [cSTB-49-M21]">
      <seq>gcgccataaaaagagtgttcatgaaaattctagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacgagcaattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcacaccaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccgtagaggtagagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaaccagaagaattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19141" stop="14334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18841" g_stop="18677" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="335" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="407" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="558" r_length="151" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.94"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14633" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="659" r_length="101" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E467507" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E467507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18841" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTG</genome_strand>
        <mrna_strand>GCGCCATAAAAAGAGTGTTCATGAAAATTCTAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACGAGCAATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACACCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAACCAGAAGAATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E269640" ref_strand="+" ref_description="SGN-E269640 [cLEM-2-H12]">
      <seq>caagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcgtttgctcactccaaattggaggaatatggaagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggagaggagctgcatatttggcaatggggaagttcaaagatgcactcaaggattttcaacaggtcaagaaattatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctaaaatttgaagaagctatttctgtcccagaatctcagaggcgttcagtagctgactctattgattatcgttctgtagaggtggagcctcaatatgctggtgcaagaatagagggagatgttgtaacattagattttgtgaagaagatgctggatgacttcaaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="18878" stop="14344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18578" g_stop="18423" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="228" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="379" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14733" g_stop="14644" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="469" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E269640" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18578" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACC</genome_strand>
        <mrna_strand>CAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E448567" ref_strand="+" ref_description="SGN-E448567 [cSTS-3-H13]">
      <seq>ctttagcaaagtctcagtcttctttgacaaacccccaaagcgccataaaaagagtgttcatgaaaattccagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacaagcaattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcactccaaattggaggaatatggcagcgcaatacatgatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggggctgcatatttggcaatggggaagttcaaagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctgccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttgaagaagctatttctgtcccagaatctcagagacgttcagtagctgactctattgattatcattccatagaggtggagcctcaatatgctggtgcaagaatagagggagatgtcgtaacattagattttgtgaagaagatgttggatgacttcaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19180" stop="14345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18880" g_stop="18677" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="374" r_length="170" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="446" r_length="72" r_score="0.958"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17523" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="597" r_length="151" r_score="0.954"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789">
            <donor d_prob="0.974" d_score="0.92"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14733" g_stop="14645" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="686" r_length="89" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E448567" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18880" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17523"/>
          <exon e_start="14733" e_stop="14645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTAGCAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGTAAGATAGCTCCAAGCTGATATTTCTTCCTTATATTATGCTCACGGAAGGTACCTTGGTCATAGAGTAAATTTCTTTGCAAAGCATGGCTTTGCACTATGTTTTCTTGTCTCATCTATGCGTATAGTTGCTGGATAAATTTCTTGCATTACATGTCATGGCATTTCATAAGGTGCAGGACATGGTTACTACAATGGAAAAATGCTTCTTTCCCTTTCCTTTCTTAATTTACTGCTGCTTGTTGCCATACACGTTTGATTCGTTAATTGAGGGATGAGAATTTCTCAATATCCTTGAAATGTTGAATTTACTGCCATGAGATTTACTTATTTGTAGAGGTTTGCACCTCTTTTGTGAAGTTTGATGCATCAGTAGTTTAGGTCTCACTTCTCAGTCTGATAGGTACTGGTTAGATGGTTTTTGTTGAAAAGTTTGAGAATGTGCGGGGGCATCAGTTTCGCCTGGGATAGATGGTAGAAAATGTTGACTTGTCCATGTGGAACTTTTCTTTTCTCTTCCCAACCTCTTCAAATGCTCTGAAGTAACCATAACAAGATAAAGAATAAATCCCTTTGATCTTTTCGACATTATCGTTTGGTTGCGAAGATGATATGTTGTTTGTTTACTATGTGCAAGTAAATAAAACATTACAAGATGTTGTTCACGAACTACTTCCAATCACTTAGTTCAAATTTAGCCATTACTTACACTTCGTGTCCCTTTCAGGAAACGCTGTAAACCTCTAACTCAAATTTTGGCAATTACTATAGTAGATTTTTAGTTAAATGACCCCCTGAATTGAACATGGGTTTGTCCTTTAGATTATTCAACAATAAACCTTCATTTGAAATAACAAGACAAAATAAGAATCTCTAAGCTTAGTCAACTTTCAACCTTTCATGTTAGTCCATATAATTTTCATTCTTATAAAAGTAAATTTTAATAGTAAAATTTACCTATTTCATCCTTATAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGGTTTGAGCCTTTATAAGAAAAATGTTGAACTAGTAGACACTCAAGTTAGTGGTAGTTCGCGAAATGGACATCCATCATAATCGGAATAGTTGAATAAGGATTAGTTGTAACCTAGAGCAAATGCTCGTATTTTATTTACATTCCATTGCGTTGCATTTGATTGAAAATTGTTCCTGTTCAATTGATATGTCCTATGTATGAAATTACTAGGAGCATGGTGTTCCAACTAAAGCCATTTTCGACCCTCTATATAGTATATTCAGCATTCTTAGTAGTTATTTGCTTCTTTTGGCCTTCTCTGAGGACCATATGAGTATGGTGTGAACTCTTCAGAAAATAGATCTCTAAAATCAGTCACAGGTTTAAGTGTTTTGCCTAGAGTACCACGTCATCCTTTGCTTTCTAACCATTAAAGTTTCTAATAAGTTAGTACTTATATTACTCAGAGCGACTTATAGATTCTTGCCCCATTATTTACGTGATACATCTCAATTCTTGGCACATCTGCTATTGTATTTTATGGGGAAGATTCTCTTTGGTAAGTAAGACAGTAGCGTTTTGCTCTGTGGGTCTCCTTTTAAACTTCAGGCTTAGAGTTCTTAGCTGCCCCTTGCTGAAGACATTCATCCCTTGCCTTATGCTTTTCGGGGTTGTTTGGTTTAGAGACAAAATTTTCAGGGGTTAGTAATGTAAGGATTAAGTAACAAAGAGATTAATAATCCAAGAATTTTTTCTTCTTGTATGTTTAGTTTGATATTTTTCCAAATAGTGTAAAATGTATATCATGAAATATGTTTTTACTTCTTAAAACCAAAAAAAAAAAATAGCTTATTTGTTATTATGATGTCGTTTTAATGTTTTTAGTCCATGGATTACTAATCCCCACATTCTTATTCCACATCATATCTGGTATAAAATAATTCATAGATTCCCGCATAACTTGTGTCTTATGCAAATATTATTTATGAGAAAAACATAAGTAGCAAAAAAGTTTATGCCAAAAACATAAGTAGCAACCAAGCATTGTCTAAATTAATGCTGGATTTTATGCAAAGGTTAAATTTCTTGACAGTAATTAGGGATTCAATCAGTTTCAAAAAAATTAGGGATTCAATCAGGATCTTATTCTGTAATTATACACTTACCAAAATCATTTACGTTGTAATTGCTATAAATTCCCATTTCAAACTATCCCTTGCTGTGTTAGCTTTATGTATGCACTATGCAGTAATTGCTAGTTTGCTGGTTCTATTTTGCCTTTCTTACCTTTAAATTTGGAGACTCTTTTAGGATGATTGGGCATGTGGCTGTCTGCATGTCTTGATCCTTGTCATTCTGACTCTTCCTTGCTTTTATGTGTCAGTACTGTTTTACATATCATATTGAGAAATCTGAGAGTTTGCGTGACATTTTTTTTGTACCCCATGATTTGTGTCTCTAACATAGTAAGACCACCTCTTGGTGTCAAGACTGTGCTGGGGAACTTGCATTCAGTGGTTTAATCTTTATTAATACTCTCTACTTCATCTAATCCAGTTAATGAGAAATCTGCTCGCTTTGTTTCACCTGAATTTACATGCCAGTTTGGTTCTTTAAATTGTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAAC</genome_strand>
        <mrna_strand>CTTTAGCAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTGTTCATGAAAATTCCAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCAATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACTCCAAATTGGAGGAATATGGCAGCGCAATACATGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGGGCTGCATATTTGGCAATGGGGAAGTTCAAAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTGCCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGACGTTCAGTAGCTGACTCTATTGATTATCATTCCATAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTCGTAACATTAGATTTTGTGAAGAAGATGTTGGATGACTTCAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E478423" ref_strand="+" ref_description="SGN-E478423 [cSTD-4-D14]">
      <seq>aacccccaaagcgccataaaaagagtgttcatgaaaattctagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacgagcaattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgctcacaccaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaagttcanagacgcactcaaggattttcaacaggtcaagaagttatgtccaaacgacccagatgctaccaaaaaattgaaggaatgtgagaaagctgtcatgaagctgaaatttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19151" stop="17291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18851" g_stop="18677" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="345" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18266" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="417" r_length="72" r_score="0.958"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17673" g_stop="17591" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="500" r_length="83" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E478423" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478423" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18851" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18266"/>
          <exon e_start="17673" e_stop="17591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTTGGTATTGTTTTTTGTAGCTTCTTCACTCATTTCAGCTGCAATTTTTTTATAAGCTTTATCTTAGGTACAACAGAAAATGTTGATGAAAAATCATTGCTTATGTAATTAGCTAACACATTTATTAGAGAAAATGATGACATACCGGTGACATTTCGTTGGGTTAATTAGCCACCTCATAGAAGATTCTTCTCTATGATTCACTTGAAAACATGTCCAAATGATACTTGAGATCTTAGCAGTAACTCGCCCATAAACAATTTAGTGGTTCAACAATGGAAGAGATATCAAGTAATCCTTTTGGACTGTTGTTTTCTTTTAAGAGAGGGCATCAATTTATTATTTTGTCTCAATACTGATTCTTGAAAGTTTTTTCTTGGATTTTTTTGACAAACTATATGGTCTTGTTTCCCAAGTGGTTTTCTTTGGTGTCTCCTCTGCATTATAGGCTCTAAATATGCTGTTTGCATGTATCTTTTGAGTCTGCTTTATAGTTTTCTGCAGAAGATGTCCCCTATCTTCTCTAGTCAGTGTCTGGAATAGTTTACCAATCTGCTAATTCTGGGATGTGTTCCTTTATTGTCTCACTCAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGA</genome_strand>
        <mrna_strand>AACCCCCAAAGCGCCATAAAAAGAGTGTTCATGAAAATTCTAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACGAGCAATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGCTCACACCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAGTTCANAGACGCACTCAAGGATTTTCAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGAAGTTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTGAAATTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E291259" ref_strand="+" ref_description="SGN-E291259 [cLET-2-L10]">
      <seq>cgccataaaaagagtattcatgaaaattccagtattgtgacttcgcacgcaacatctactcagccagcctccagtcgccattgttatgcccggtatggaagctgagaactcaaacgcctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattcgcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcgtttgctcactccaaattggaggaatatggaagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggagaggagctgcatatttggcaatggggaagttcaaagatgcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19140" stop="17981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18840" g_stop="18677" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="334" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18281" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="391" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E291259" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18840" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTC</genome_strand>
        <mrna_strand>CGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E482445" ref_strand="+" ref_description="SGN-E482445 [cSTD-22-A18]">
      <seq>cccccaaagcgccataaaaagagtgttcatgaaaattctagtattgtgattccgcacgcaacacctacccagccagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagtattcaaagggcataagtattcgcaagctattgatctgtacacacaagcaattgagttgaacggtgagagtgcggtgtactatgctaaccgtgcctttgctcacaccaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatggggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19149" stop="17996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18849" g_stop="18677" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="343" r_length="170" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18296" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="385" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E482445" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18849" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAG</genome_strand>
        <mrna_strand>CCCCCAAAGCGCCATAAAAAGAGTGTTCATGAAAATTCTAGTATTGTGATTCCGCACGCAACACCTACCCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGTATTCAAAG....................................................................................GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCAATTGAGTTGAACGGTGAGAGTGCGGTGTACTATGCTAACCGTGCCTTTGCTCACACCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E568774" ref_strand="+" ref_description="SGN-E568774 [13110]">
      <seq>aaagagtgttcatgaaaattccagtattgtgattccgcattcaacacctacccaggcagcctccagtcgccattgttatgcccggtatggaaactgagaactcaaacacctcccgagctgaagaactcaagcaactcgcaaatgaagcattcaaagggcataagtattctcaagctattgatctgtacacacaagcgattgagttgaacggtgagaatgcggtgtactatgctaaccgtgcctttgtttcacagcaaattggaggaatatggcagcgcaatacaggatggaactagagctattgaaattgaccctagatattcaaagggttattataggcgaggagctgcatatttggcaatgggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="-" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="19132" stop="17998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18832" g_stop="18677" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18592" g_stop="18423" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="327" r_length="171" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18337" g_stop="18298" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="367" r_length="40" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="-" ref_id="SGN-E568774" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18832" e_stop="18677"/>
          <exon e_start="18592" e_stop="18423"/>
          <exon e_start="18337" e_stop="18298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGTAAATTCAATATACACAAACTTGAGGTTGTATCATGTGGATTTATGAATAATAAGTCTGTTTATGATTTCAATGTGTTTTCAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTG-CTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAGGTAAGTATTTGAATTGTGAAAGAATTGGAATGGAATTGTGGTTTCTTTGTTTCTATTGATGTGTGATTAATTGCTGAGGTTGCAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGA</genome_strand>
        <mrna_strand>AAAGAGTGTTCATGAAAATTCCAGTATTGTGATTCCGCATTCAACACCTACCCAGGCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAACTGAGAACTCAAACACCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG....................................................................................GGCATAAGTATTCTCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCCTTTGTTTCACAGCAAATTGGAGGAATATGGCAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG.....................................................................................GGTTATTATAGGCGAGGAGCTGCATATTTGGCAATGGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E552363" ref_strand="+" ref_description="SGN-E552363 [cTSB-3-K5]">
      <seq>ggttattctttttttaatcaatgacctcttatagctgcacgaaagcaaaaaaatgaaaaataaaataaaaggaagcttggaggaaagaatacccgcaaatgtctttgttttattaatttatagctacatgaagagaaaaaagtatttataagctagtagaagaagtacaaacaaatacatattcaggtttggcctttaaaccctctgttatgggaggaactttggaacaaaaagtgaagaaaattcctgtaacattccttccatagtctctctgggaaattgattatcaacacttgcctatctgttcattatagtctctctgggatattgattatcaacacttgcctatctgttcattcttactgccatgtttattattgtaacaaatgaggaatgttgtgtttgtactgttttaaactatatatgaaaacaaaaggatagtctcgtgcgctaacctctcgttacttaggggtccagggaagggctggaaccatattgggtatatgtacacaatcttactacttggcatttcagtaagaagttgtttccacagcttgaaacaatgactttgtggttgcagtacaccacttatcattgtgccaagcccaccttctattaaatcatctttgaatgaacgcaaaaatatattttgacttcaatcagtgcccaatgtagtcaacttggcattcttcacaagtttttgtacagtgtgtgagcttcatgaccactttctcagcttctaattgtgttacttgcaggcatgggcacttaatttttttcagaaactgaaggccgtcttgaagtttgatcattcaaattcaaagagtcactggtctcgccccaccttctgatgagatgtgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="+" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="29067" stop="30530"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29367" g_stop="30230" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="864" r_length="864" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="+" ref_id="SGN-E552363" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E552363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29367" e_stop="30230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATTCTTTTTTTAATCAATGACCTCTTATAGCTGCACGAAAGCAAAAAAATGAAAAATAAAATAAAAGGAAGCTTGGAGGAAAGAATACCCGCAAATGTCTTTGTTTTATTAATTTATAGCTACATGAAGAGAAAAAAGTATTTATAAGCTAGTAGAAGAAGTACAAACAAATACATATTCAGGTTTGGCCTTTAAACCCTCTGTTATGGGAGGAACTTTGGAACAAAAAGTGAAGAAAATTCCTGTAACATTCCTTCCATAGTCTCTCTGGGAAATTGATTATCAACACTTGCCTATCTGTTCATTATAGTCTCTCTGGGATATTGATTATCAACACTTGCCTATCTGTTCATTCTTACTGCCATGTTTATTATTGTAACAAATGAGGAATGTTGTGTTTGTACTGTTTTAAACTATATATGAAAACAAAAGGATAGTCTCGTGCGCTAACCTCTCGTTACTTAGGGGTCCAGGGAAGGGCTGGAACCATATTGGGTATATGTACACAATCTTACTACTTGGCATTTCAGTAAGAAGTTGTTTCCACAGCTTGAAACAATGACTTTGTGGTTGCAGTACACCACTTATCATTGTGCCAAGCCCACCTTCTATTAAATCATCTTTGAATGAACGCAAAAATATATTTTGACTTCAATCAGTGCCCAATGTAGTCAACTTGGCATTCTTCACAAGTTTTTGTACAGTGTGTGAGCTTCATGACCACTTTCTCAGCTTCTAATTGTGTTACTTGCAGGCATGGGCACTTAATTTTTTTCAGAAACTGAAGGCCGTCTTGAAGTTTGATCATTCAAATTCAAAGAGTCACTGGTCTCGCCCAACCTTCTGATGAGATGTGCTTG</genome_strand>
        <mrna_strand>GGTTATTCTTTTTTTAATCAATGACCTCTTATAGCTGCACGAAAGCAAAAAAATGAAAAATAAAATAAAAGGAAGCTTGGAGGAAAGAATACCCGCAAATGTCTTTGTTTTATTAATTTATAGCTACATGAAGAGAAAAAAGTATTTATAAGCTAGTAGAAGAAGTACAAACAAATACATATTCAGGTTTGGCCTTTAAACCCTCTGTTATGGGAGGAACTTTGGAACAAAAAGTGAAGAAAATTCCTGTAACATTCCTTCCATAGTCTCTCTGGGAAATTGATTATCAACACTTGCCTATCTGTTCATTATAGTCTCTCTGGGATATTGATTATCAACACTTGCCTATCTGTTCATTCTTACTGCCATGTTTATTATTGTAACAAATGAGGAATGTTGTGTTTGTACTGTTTTAAACTATATATGAAAACAAAAGGATAGTCTCGTGCGCTAACCTCTCGTTACTTAGGGGTCCAGGGAAGGGCTGGAACCATATTGGGTATATGTACACAATCTTACTACTTGGCATTTCAGTAAGAAGTTGTTTCCACAGCTTGAAACAATGACTTTGTGGTTGCAGTACACCACTTATCATTGTGCCAAGCCCACCTTCTATTAAATCATCTTTGAATGAACGCAAAAATATATTTTGACTTCAATCAGTGCCCAATGTAGTCAACTTGGCATTCTTCACAAGTTTTTGTACAGTGTGTGAGCTTCATGACCACTTTCTCAGCTTCTAATTGTGTTACTTGCAGGCATGGGCACTTAATTTTTTTCAGAAACTGAAGGCCGTCTTGAAGTTTGATCATTCAAATTCAAAGAGTCACTGGTCTCGCCCCACCTTCTGATGAGATGTGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E552705" ref_strand="+" ref_description="SGN-E552705 [cTSB-4-M15]">
      <seq>ggttattctttttttaatcaatgacctcttatagctgcacgaaagcaaaaaaatgaaaaataaaataaaaggaagcttggaggaaagaatacccgcaaatgtctttgttttattaatttatagctacatgaagagaaaaaagtatttataagctagtagaagaagtacaaacaaatacatattcaggtttggcctttaaaccctctgttatgggaggaactttggaacaaaaagtgaagaaaattcctgtaacattccttccatagtctctctgggaaattgattatcaacacttgcctatctgttcattatagtctctctgggatattgattatcaacacttgcctatctgttcattcttactgccatgtttattattgtaacaaatgaggaatgttgtgtttgtactgttttaaactatatatgaaaacaaaaggatagtctcgtgcgctaacctctcgttacttaggggtccagggaagggctggaaccatattgggtatatgtacacaatcttactacttggcatttcagtaagaagttgtttccacagcttgaaacaatgactttgtggttgcagtacaccacttatcattgtgccaagcccaccttctattaaatcatctttgaatgaacgcaaaaatatattttgacttcaatcagtgcccaatgtagtcaacttggcattcttcacaagtttttgtacagtgtgtgagcttcatgaccactttctcagcttctaattgtgttacttgcaggcatgggcacttaatttttttcagaaactgaaggccgtcttgaagtttgatcattcaattcaaagagtcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="+" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="29067" stop="30497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29367" g_stop="30197" g_length="831"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="830" r_length="830" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="+" ref_id="SGN-E552705" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>831</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E552705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29367" e_stop="30197"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATTCTTTTTTTAATCAATGACCTCTTATAGCTGCACGAAAGCAAAAAAATGAAAAATAAAATAAAAGGAAGCTTGGAGGAAAGAATACCCGCAAATGTCTTTGTTTTATTAATTTATAGCTACATGAAGAGAAAAAAGTATTTATAAGCTAGTAGAAGAAGTACAAACAAATACATATTCAGGTTTGGCCTTTAAACCCTCTGTTATGGGAGGAACTTTGGAACAAAAAGTGAAGAAAATTCCTGTAACATTCCTTCCATAGTCTCTCTGGGAAATTGATTATCAACACTTGCCTATCTGTTCATTATAGTCTCTCTGGGATATTGATTATCAACACTTGCCTATCTGTTCATTCTTACTGCCATGTTTATTATTGTAACAAATGAGGAATGTTGTGTTTGTACTGTTTTAAACTATATATGAAAACAAAAGGATAGTCTCGTGCGCTAACCTCTCGTTACTTAGGGGTCCAGGGAAGGGCTGGAACCATATTGGGTATATGTACACAATCTTACTACTTGGCATTTCAGTAAGAAGTTGTTTCCACAGCTTGAAACAATGACTTTGTGGTTGCAGTACACCACTTATCATTGTGCCAAGCCCACCTTCTATTAAATCATCTTTGAATGAACGCAAAAATATATTTTGACTTCAATCAGTGCCCAATGTAGTCAACTTGGCATTCTTCACAAGTTTTTGTACAGTGTGTGAGCTTCATGACCACTTTCTCAGCTTCTAATTGTGTTACTTGCAGGCATGGGCACTTAATTTTTTTCAGAAACTGAAGGCCGTCTTGAAGTTTGATCATTCAAATTCAAAGAGTCACT</genome_strand>
        <mrna_strand>GGTTATTCTTTTTTTAATCAATGACCTCTTATAGCTGCACGAAAGCAAAAAAATGAAAAATAAAATAAAAGGAAGCTTGGAGGAAAGAATACCCGCAAATGTCTTTGTTTTATTAATTTATAGCTACATGAAGAGAAAAAAGTATTTATAAGCTAGTAGAAGAAGTACAAACAAATACATATTCAGGTTTGGCCTTTAAACCCTCTGTTATGGGAGGAACTTTGGAACAAAAAGTGAAGAAAATTCCTGTAACATTCCTTCCATAGTCTCTCTGGGAAATTGATTATCAACACTTGCCTATCTGTTCATTATAGTCTCTCTGGGATATTGATTATCAACACTTGCCTATCTGTTCATTCTTACTGCCATGTTTATTATTGTAACAAATGAGGAATGTTGTGTTTGTACTGTTTTAAACTATATATGAAAACAAAAGGATAGTCTCGTGCGCTAACCTCTCGTTACTTAGGGGTCCAGGGAAGGGCTGGAACCATATTGGGTATATGTACACAATCTTACTACTTGGCATTTCAGTAAGAAGTTGTTTCCACAGCTTGAAACAATGACTTTGTGGTTGCAGTACACCACTTATCATTGTGCCAAGCCCACCTTCTATTAAATCATCTTTGAATGAACGCAAAAATATATTTTGACTTCAATCAGTGCCCAATGTAGTCAACTTGGCATTCTTCACAAGTTTTTGTACAGTGTGTGAGCTTCATGACCACTTTCTCAGCTTCTAATTGTGTTACTTGCAGGCATGGGCACTTAATTTTTTTCAGAAACTGAAGGCCGTCTTGAAGTTTGATCATTC-AATTCAAAGAGTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-5HQGpg/sgn_ests_tomato_potato" ref_id="SGN-E698070" ref_strand="+" ref_description="SGN-E698070 [FA05AF09]">
      <seq>atgatcaacaaaatctcaccccgtatcctgtgctgggaatactgaaaggcatggttgcttgctctcctagtatccaaatcaatcaggccattccaaggcctcaagtttgtcctcctcacttcagtcaccaaattgattcggtgcagcaaaattgtttaggtgcaatcaaacaaagccctttcaccctgtataatcagaaagcaaattttgaggagccttttccaggtggatataaatctttcacaatcagcccatatggacctgtaccaacattaatgcatcattactccagccagaatgggggctcgagctctcttgatctgaacagctcaagctgtgccatcaactttccttactcacgtctagattccggaaggaacttccgatcatcgtggtctcagttctctacagaaagcaccccatggttttcagatgcaaaacaaaagaaactactaatggattttcatgaattatattcttcatctgacaggaaacatcattactgcagcagcattactggggatagccgtcaaactgacccttcactatatcttgcatcagagcgcttctgttctttcactcagcgccctcaacatgcattggggaatccagtctctctaccatctttagctaacaatgtccctatgccactccaaataggttccagagtaaacactggctcatataaaagaaatggtgacgtgaccaaaatcatatctactccttgtctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0023C09-FgHyR/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0023C09.1" temp_strand="+" temp_description="C07HBa0023C09.1  AC210349.1 htgs_phase:3 submitted_to_sgn_as:C07HBa0023C09 upload_account_name:france">
        <position start="53152" stop="54482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53452" g_stop="54182" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0023C09.1" gen_strand="+" ref_id="SGN-E698070" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0023C09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53452" e_stop="54182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATCAACAAAATCTCACCGTGCATCCTGTGCTGGGAATACTGAAAGGCATGGTTGCTTGCTCTCCTAGTATCCAAATCAATCAGGCCATTCCAAGGCCTCAAGTTTGTCCTCCTCACTTCAGTCACCAAATTGATTCGGTGCAGCAAAATTGTTTAGGTGCAATCAAACAAAGCCCTTTCACCCTGTATAATCAGAAAGCAAATTTTGAGGAGCCTTTTCCAGGTGGATATAAATCTTTCACAATCAGCCCATATGGACCTGTACCAACATTAATGCATCATTACTCCAGCCAGAATGGGGGCTCGAGCTCTCTTGATCTGAACAGCTCAAGCTGTGCCATCAACTTTCCTTACTCACGTCTAGATTCCGGAAGGAACTTCCGATCATCGTGGTCTCAGTTCTCTACAGAAAGCACCCCATGGTTTTCAGATGCAAAACAAAAGAAACTACTAATGGATTTTCATGAATTATATTCTTCATCTGACAGGAAACATCATTACTGCAGCAGCATTACTGGGGATAGCCGTCAAACTGACCCTTCACTATATCTTGCATCAGAGCGCTTCTGTTCTTTCACTCAGCGCCCTCAACATGCATTGGGGAATCCAGTCTCTCTACCATCTTTAGCTAACAATGTCCCTATGCCACTCCAAATAGGTTCCAGAGTAAACACTGGCTCATATAAAAGAAATGGTGACGTGACCAAAATCATATCTACTCCTTGTCTT</genome_strand>
        <mrna_strand>ATGATCAACAAAATCTCACCCCGTATCCTGTGCTGGGAATACTGAAAGGCATGGTTGCTTGCTCTCCTAGTATCCAAATCAATCAGGCCATTCCAAGGCCTCAAGTTTGTCCTCCTCACTTCAGTCACCAAATTGATTCGGTGCAGCAAAATTGTTTAGGTGCAATCAAACAAAGCCCTTTCACCCTGTATAATCAGAAAGCAAATTTTGAGGAGCCTTTTCCAGGTGGATATAAATCTTTCACAATCAGCCCATATGGACCTGTACCAACATTAATGCATCATTACTCCAGCCAGAATGGGGGCTCGAGCTCTCTTGATCTGAACAGCTCAAGCTGTGCCATCAACTTTCCTTACTCACGTCTAGATTCCGGAAGGAACTTCCGATCATCGTGGTCTCAGTTCTCTACAGAAAGCACCCCATGGTTTTCAGATGCAAAACAAAAGAAACTACTAATGGATTTTCATGAATTATATTCTTCATCTGACAGGAAACATCATTACTGCAGCAGCATTACTGGGGATAGCCGTCAAACTGACCCTTCACTATATCTTGCATCAGAGCGCTTCTGTTCTTTCACTCAGCGCCCTCAACATGCATTGGGGAATCCAGTCTCTCTACCATCTTTAGCTAACAATGTCCCTATGCCACTCCAAATAGGTTCCAGAGTAAACACTGGCTCATATAAAAGAAATGGTGACGTGACCAAAATCATATCTACTCCTTGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>59</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1023" PGL_stop="209"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1023" e_stop="750"/>
            <exon e_start="649" e_stop="469"/>
            <exon e_start="241" e_stop="209"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.795" acc_prob="0.961" e_score="0.978"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1023" e_stop="750" e_length="274"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.998">
            <gDNA_intron_boundary i_start="749" i_stop="650" i_length="100"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="649" e_stop="469" e_length="181"/>
          </exon>
          <intron i_serial="2" don_prob="0.795" acc_prob="0.961">
            <gDNA_intron_boundary i_start="468" i_stop="242" i_length="227"/>
          </intron>
          <exon e_serial="3" e_score="0.939">
            <gDNA_exon_boundary e_start="241" e_stop="209" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1023" stop="750"/>
              <exon start="649" stop="469"/>
              <exon start="241" stop="209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="871" stop="750"/>
              <exon start="649" stop="518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394622" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAACCATAGAATTTATTAGTAACACTAATGGAGCGCGGGAAATCTTCAGCTGTTGCTCGAAGTCGGTTATCGGTAATCACAGCTCATCTCGCCGCCGATTACTCCGCCTCCTCCCATGGTCTGGAAACTTCCTCTGTATCTGCACCAACCGCTGCCGTGTCGCCGCCGCCTAATCTGAAAGGCGCCTTGACAATCATTGATGAGAGGACCGGTAAGAAGTATCAGGTTCCGGTTACCGAGGAAGGAACTGTTAAAGCTACCGACTTTAAGAAA : ATATCTACTGGATACAATGATAAGGGTCTCAAGCTTTATGATCCGGGCTATCTCAACACTGCACCCGTTCGTTCATCAATATGTTACATAGATGGTGATGCAGGGATTCTCAGGTATCGAGGTTACCCGATTGAAGAGTTGGCTGAGAGAAGTTCCTTCTTAGAAGTGGCTTATCTTTTAA : TGTATGGTAATTTACCATCTGAGAACCAATTAT</gDNA_template>
            <first_frame> *  T  I  E  F  I  S  N  T  N  G  A  R  E  I  F  S  C  C  S  K  S  V  I  G  N  H  S  S  S  R  R  R  L  L  R  L  L  P  W  S  G  N  F  L  C  I  C  T  N  R  C  R  V  A  A  A  *  S  E  R  R  L  D  N  H  *  *  E  D  R  *  E  V  S  G  S  G  Y  R  G  R  N  C  *  S  Y  R  L  *  E   : N  I  Y  W  I  Q  *  *  G  S  Q  A  L  *  S  G  L  S  Q  H  C  T  R  S  F  I  N  M  L  H  R  W  *  C  R  D  S  Q  V  S  R  L  P  D  *  R  V  G  *  E  K  F  L  L  R  S  G  L  S  F  N :   V  W  *  F  T  I  *  E  P  I   </first_frame>
            <second_frame>  E  P  *  N  L  L  V  T  L  M  E  R  G  K  S  S  A  V  A  R  S  R  L  S  V  I  T  A  H  L  A  A  D  Y  S  A  S  S  H  G  L  E  T  S  S  V  S  A  P  T  A  A  V  S  P  P  P  N  L  K  G  A  L  T  I  I  D  E  R  T  G  K  K  Y  Q  V  P  V  T  E  E  G  T  V  K  A  T  D  F  K  K  :  I  S  T  G  Y  N  D  K  G  L  K  L  Y  D  P  G  Y  L  N  T  A  P  V  R  S  S  I  C  Y  I  D  G  D  A  G  I  L  R  Y  R  G  Y  P  I  E  E  L  A  E  R  S  S  F  L  E  V  A  Y  L  L   : M  Y  G  N  L  P  S  E  N  Q  L  </second_frame>
            <third_frame>   N  H  R  I  Y  *  *  H  *  W  S  A  G  N  L  Q  L  L  L  E  V  G  Y  R  *  S  Q  L  I  S  P  P  I  T  P  P  P  P  M  V  W  K  L  P  L  Y  L  H  Q  P  L  P  C  R  R  R  L  I  *  K  A  P  *  Q  S  L  M  R  G  P  V  R  S  I  R  F  R  L  P  R  K  E  L  L  K  L  P  T  L  R  K :   Y  L  L  D  T  M  I  R  V  S  S  F  M  I  R  A  I  S  T  L  H  P  F  V  H  Q  Y  V  T  *  M  V  M  Q  G  F  S  G  I  E  V  T  R  L  K  S  W  L  R  E  V  P  S  *  K  W  L  I  F  *  :  C  M  V  I  Y  H  L  R  T  N  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1013" stop="750"/>
                    <exon start="649" stop="469"/>
                    <exon start="241" stop="210"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLLVTLMERGKSSAVARSRLSVITAHLAADYSASSHGLETSSVSAPTAAVSPPPNLKGALTIIDERTGKKYQVPVTEEGTVKATDFKKISTGYNDKGLKLYDPGYLNTAPVRSSICYIDGDAGILRYRGYPIEELAERSSFLEVAYLLMYGNLPSENQL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="7353" PGL_stop="1204"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7353" e_stop="7074"/>
            <exon e_start="6678" e_stop="6589"/>
            <exon e_start="6087" e_stop="6009"/>
            <exon e_start="5786" e_stop="5709"/>
            <exon e_start="4319" e_stop="4271"/>
            <exon e_start="3116" e_stop="3067"/>
            <exon e_start="2342" e_stop="2193"/>
            <exon e_start="1727" e_stop="1647"/>
            <exon e_start="1541" e_stop="1204"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.373" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.852" acc_prob="0.751" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7353" e_stop="7074" e_length="280"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="7073" i_stop="6679" i_length="395"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="6678" e_stop="6589" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.373" acc_prob="0.965">
            <gDNA_intron_boundary i_start="6588" i_stop="6088" i_length="501"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="6087" e_stop="6009" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.984">
            <gDNA_intron_boundary i_start="6008" i_stop="5787" i_length="222"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5786" e_stop="5709" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.984">
            <gDNA_intron_boundary i_start="5708" i_stop="4320" i_length="1389"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="4319" e_stop="4271" e_length="49"/>
          </exon>
          <intron i_serial="5" don_prob="0.852" acc_prob="0.751">
            <gDNA_intron_boundary i_start="4270" i_stop="3117" i_length="1154"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3116" e_stop="3067" e_length="50"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="3066" i_stop="2343" i_length="724"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="2342" e_stop="2193" e_length="150"/>
          </exon>
          <intron i_serial="7" don_prob="0.936" acc_prob="0.920">
            <gDNA_intron_boundary i_start="2192" i_stop="1728" i_length="465"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="1727" e_stop="1647" e_length="81"/>
          </exon>
          <intron i_serial="8" don_prob="0.922" acc_prob="0.998">
            <gDNA_intron_boundary i_start="1646" i_stop="1542" i_length="105"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="1541" e_stop="1204" e_length="338"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7353" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4271"/>
              <exon start="3116" stop="3067"/>
              <exon start="2342" stop="2193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699647" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7342" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4271"/>
              <exon start="3116" stop="3067"/>
              <exon start="2342" stop="2193"/>
              <exon start="1727" stop="1687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717802" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7340" stop="7074"/>
              <exon start="6678" stop="6634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442251" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7330" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4271"/>
              <exon start="3116" stop="3067"/>
              <exon start="2342" stop="2193"/>
              <exon start="1727" stop="1667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7327" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7327" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7327" stop="7074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4271"/>
              <exon start="3116" stop="3067"/>
              <exon start="2342" stop="2193"/>
              <exon start="1727" stop="1651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4271"/>
              <exon start="3116" stop="3067"/>
              <exon start="2342" stop="2280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259067" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264591" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7326" stop="7074"/>
              <exon start="6678" stop="6589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7257" stop="7074"/>
              <exon start="6678" stop="6589"/>
              <exon start="6087" stop="6009"/>
              <exon start="5786" stop="5709"/>
              <exon start="4319" stop="4287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2342" stop="2193"/>
              <exon start="1727" stop="1647"/>
              <exon start="1541" stop="1204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369928" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTTTTCTTCATGGCTTCGAAGCTCGTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATAAACTCAGAGACCCGGTTTCCATTTTCTCCACCTCACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTACAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTG : GTGGGATGCAGAAGGACCCTTTAAGCCATTACATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAG : AAAGGATCCAAATTGCACTAGACCTTTTGAAGGACTGAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAG : CCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAAATATTAAGATTGCTCGCCTTCATGCG : GATTTGGATCCACAAACTTCTTCAATTGAATATCGGTGCACAACAGCTG : AAAGCCTGGTTGAAGAACAGAGACAATTCGATGCTGTGATTGCGCTAGAG : GTGATTGAGCATGTAGCAGATCCTGCTGGATTCTGCAAATCATTATCAGCGTTGACCATTCCTGGTGGTGCTACAGTGATATCAACGATTAATCGTTCAATGAGAGCATATGCAACGGCAATTGTTGCAGCAGAGTATCTCCTACATTGG : CTTCCAAAAGGTACACATCAATGGTCAAGCTTTCTAACCCCAGAAGAACTAGTCCTCATTCTTCAGCGCGCTTCTATATCG : GTGCAAGAGATGGCTGGATTTGTGTACAACCCTTTGACGGGTCGCTGGTCCTTGTCCGATGACATCAGTGTTAATTTCATCGCTTTCGGAACAAAATCAGCCAAGAAGGATGAAACTCTAGATTAAGTTACGATATAGCTGTCAATTTTATTCTGCTGTTAATCTCTTAACCCATTCTGTATGTAATCTCTTTTTCAGTTTTGTTGGATGATGAATGCAATTTCTATATGTTAGAATATGAACATCCACATCACAAGTTCTTAACTTGAATGAAAATGTACCATTTCGAAATTTCAAATACATGTGTATTATCTTTGATTGATAAAATTTGTAACTTC</gDNA_template>
            <first_frame> H  F  S  S  W  L  R  S  S  F  *  T  D  *  D  L  S  V  E  S  L  N  S  A  T  S  V  L  I  N  S  E  T  R  F  P  F  S  P  P  H  K  I  R  *  H  G  D  L  I  P  K  L  L  S  Q  L  R  *  I  L  H  H  H  L  L  H  P  L  I  L  L  Q  Q  L  Q  V  L  S  M  N  L  N  L  P  N  S  L  P  L  P  K  P   : G  G  M  Q  K  D  P  L  S  H  Y  I  *  *  T  L  Q  D  L  L  L  L  G  P  L  F  V  G  T  S   : E  R  I  Q  I  A  L  D  L  L  K  D  *  S  L  L  M  L  V  V  E  A  E  F  Y  L  S :   L  W  L  E  W  E  L  R  S  R  E  L  M  L  W  T  K  I  L  R  L  L  A  F  M  R :   I  W  I  H  K  L  L  Q  L  N  I  G  A  Q  Q  L  :  K  A  W  L  K  N  R  D  N  S  M  L  *  L  R  *  R :   *  L  S  M  *  Q  I  L  L  D  S  A  N  H  Y  Q  R  *  P  F  L  V  V  L  Q  *  Y  Q  R  L  I  V  Q  *  E  H  M  Q  R  Q  L  L  Q  Q  S  I  S  Y  I  G :   F  Q  K  V  H  I  N  G  Q  A  F  *  P  Q  K  N  *  S  S  F  F  S  A  L  L  Y  R :   C  K  R  W  L  D  L  C  T  T  L  *  R  V  A  G  P  C  P  M  T  S  V  L  I  S  S  L  S  E  Q  N  Q  P  R  R  M  K  L  *  I  K  L  R  Y  S  C  Q  F  Y  S  A  V  N  L  L  T  H  S  V  C  N  L  F  F  S  F  V  G  *  *  M  Q  F  L  Y  V  R  I  *  T  S  T  S  Q  V  L  N  L  N  E  N  V  P  F  R  N  F  K  Y  M  C  I  I  F  D  *  *  N  L  *  L  </first_frame>
            <second_frame>  I  F  L  H  G  F  E  A  R  F  E  P  T  E  I  S  L  *  S  L  S  T  Q  R  R  P  F  *  *  T  Q  R  P  G  F  H  F  L  H  L  T  K  S  G  N  M  A  I  L  F  R  S  F  S  A  N  S  D  K  S  S  T  T  T  S  S  I  P  *  Y  F  Y  N  N  F  K  F  S  Q  *  I  *  T  C  Q  I  L  C  H  C  R  N  L  :  V  G  C  R  R  T  L  *  A  I  T  S  D  E  P  Y  K  T  C  F  Y  *  V  H  S  L  S  A  L  Q  :  K  G  S  K  L  H  *  T  F  *  R  T  E  V  C  *  C  W  L  W  R  R  N  F  I  *   : A  F  G  S  N  G  S  Y  G  H  G  S  *  C  C  G  Q  K  Y  *  D  C  S  P  S  C   : G  F  G  S  T  N  F  F  N  *  I  S  V  H  N  S  * :   K  P  G  *  R  T  E  T  I  R  C  C  D  C  A  R   : G  D  *  A  C  S  R  S  C  W  I  L  Q  I  I  I  S  V  D  H  S  W  W  C  Y  S  D  I  N  D  *  S  F  N  E  S  I  C  N  G  N  C  C  S  R  V  S  P  T  L   : A  S  K  R  Y  T  S  M  V  K  L  S  N  P  R  R  T  S  P  H  S  S  A  R  F  Y  I   : G  A  R  D  G  W  I  C  V  Q  P  F  D  G  S  L  V  L  V  R  *  H  Q  C  *  F  H  R  F  R  N  K  I  S  Q  E  G  *  N  S  R  L  S  Y  D  I  A  V  N  F  I  L  L  L  I  S  *  P  I  L  Y  V  I  S  F  S  V  L  L  D  D  E  C  N  F  Y  M  L  E  Y  E  H  P  H  H  K  F  L  T  *  M  K  M  Y  H  F  E  I  S  N  T  C  V  L  S  L  I  D  K  I  C  N  F </second_frame>
            <third_frame>   F  F  F  M  A  S  K  L  V  L  N  R  L  R  S  L  C  R  V  S  Q  L  S  D  V  R  F  D  K  L  R  D  P  V  S  I  F  S  T  S  Q  N  Q  V  T  W  R  S  Y  S  E  A  S  Q  P  T  P  I  N  P  P  P  P  P  P  P  S  P  N  T  S  T  T  T  S  S  S  L  N  E  F  E  L  A  K  F  S  A  I  A  E  T  W :   W  D  A  E  G  P  F  K  P  L  H  L  M  N  P  T  R  L  A  F  I  R  S  T  L  C  R  H  F  R :   K  D  P  N  C  T  R  P  F  E  G  L  K  F  V  D  V  G  C  G  G  G  I  L  S  E  :  P  L  A  R  M  G  A  T  V  T  G  V  D  A  V  D  K  N  I  K  I  A  R  L  H  A  :  D  L  D  P  Q  T  S  S  I  E  Y  R  C  T  T  A   : E  S  L  V  E  E  Q  R  Q  F  D  A  V  I  A  L  E  :  V  I  E  H  V  A  D  P  A  G  F  C  K  S  L  S  A  L  T  I  P  G  G  A  T  V  I  S  T  I  N  R  S  M  R  A  Y  A  T  A  I  V  A  A  E  Y  L  L  H  W  :  L  P  K  G  T  H  Q  W  S  S  F  L  T  P  E  E  L  V  L  I  L  Q  R  A  S  I  S  :  V  Q  E  M  A  G  F  V  Y  N  P  L  T  G  R  W  S  L  S  D  D  I  S  V  N  F  I  A  F  G  T  K  S  A  K  K  D  E  T  L  D  *  V  T  I  *  L  S  I  L  F  C  C  *  S  L  N  P  F  C  M  *  S  L  F  Q  F  C  W  M  M  N  A  I  S  I  C  *  N  M  N  I  H  I  T  S  S  *  L  E  *  K  C  T  I  S  K  F  Q  I  H  V  Y  Y  L  *  L  I  K  F  V  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7351" stop="7074"/>
                    <exon start="6678" stop="6589"/>
                    <exon start="6087" stop="6009"/>
                    <exon start="5786" stop="5709"/>
                    <exon start="4319" stop="4271"/>
                    <exon start="3116" stop="3067"/>
                    <exon start="2342" stop="2193"/>
                    <exon start="1727" stop="1647"/>
                    <exon start="1541" stop="1416"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>978</number_coding_nucleotides>
                  <number_encoded_amino_acids>326</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFMASKLVLNRLRSLCRVSQLSDVRFDKLRDPVSIFSTSQNQVTWRSYSEASQPTPINPPPPPPPSPNTSTTTSSSLNEFELAKFSAIAETWWDAEGPFKPLHLMNPTRLAFIRSTLCRHFRKDPNCTRPFEGLKFVDVGCGGGILSEPLARMGATVTGVDAVDKNIKIARLHADLDPQTSSIEYRCTTAESLVEEQRQFDAVIALEVIEHVADPAGFCKSLSALTIPGGATVISTINRSMRAYATAIVAAEYLLHWLPKGTHQWSSFLTPEELVLILQRASISVQEMAGFVYNPLTGRWSLSDDISVNFIAFGTKSAKKDETLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="18880" PGL_stop="8817"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18880" e_stop="18677"/>
            <exon e_start="18592" e_stop="18423"/>
            <exon e_start="18337" e_stop="18266"/>
            <exon e_start="17673" e_stop="17523"/>
            <exon e_start="14733" e_stop="14625"/>
            <exon e_start="14543" e_stop="14426"/>
            <exon e_start="12809" e_stop="12662"/>
            <exon e_start="11805" e_stop="11557"/>
            <exon e_start="11043" e_stop="10918"/>
            <exon e_start="10785" e_stop="10685"/>
            <exon e_start="9683" e_stop="9609"/>
            <exon e_start="9447" e_stop="8817"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18880" e_stop="18677" e_length="204"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18592" e_stop="18423" e_length="170"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18337" e_stop="18266" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17673" e_stop="17523" e_length="151"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.969">
            <gDNA_intron_boundary i_start="17522" i_stop="14734" i_length="2789"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="14733" e_stop="14625" e_length="109"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="14543" e_stop="14426" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.954">
            <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="12809" e_stop="12662" e_length="148"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.814">
            <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="11805" e_stop="11557" e_length="249"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.920">
            <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="11043" e_stop="10918" e_length="126"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="10785" e_stop="10685" e_length="101"/>
          </exon>
          <intron i_serial="10" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="9683" e_stop="9609" e_length="75"/>
          </exon>
          <intron i_serial="11" don_prob="0.989" acc_prob="0.982">
            <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="9447" e_stop="8817" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18880" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18880" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448567" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18874" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18870" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18851" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18849" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18846" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18841" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18840" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18833" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453866" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18832" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18753" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737986" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18578" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18300" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E483300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17667" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17660" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17644" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17600" stop="17523"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486371" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14657" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12762" stop="12662"/>
              <exon start="11805" stop="11557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11765" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592794" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11692" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11661" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11643" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589540" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558992" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="8926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="8947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="8967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="9019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238224" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="9045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237493" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="9074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9660" stop="9609"/>
              <exon start="9447" stop="8979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9659" stop="9609"/>
              <exon start="9447" stop="8817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9659" stop="9609"/>
              <exon start="9447" stop="8820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9659" stop="9609"/>
              <exon start="9447" stop="8874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232056" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTAGCAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG : GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG : GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG : GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG : AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG : GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG : TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG : CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG : GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG : ATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAG : ATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG : CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTATCAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGGTCA</gDNA_template>
            <first_frame> L  *  Q  S  L  S  L  L  *  Q  T  P  K  A  P  *  K  E  Y  S  *  K  F  Q  Y  C  D  F  A  R  N  I  Y  S  A  S  L  Q  S  P  L  L  C  P  V  W  K  L  R  T  Q  T  P  P  E  L  K  N  S  S  N  S  Q  M  K  H  S  K  :  G  I  S  I  R  K  L  L  I  C  T  H  K  R  L  S  *  T  V  R  M  R  C  T  M  L  T  V  R  L  L  T  P  N  W  R  N  M  E  A  Q  Y  R  M  E  L  E  L  L  K  L  T  L  D  I  Q  R :   V  I  I  G  E  E  L  H  I  W  Q  W  G  S  S  K  M  H  S  R  I  F  N  R :   S  R  N  Y  V  Q  T  T  Q  M  L  P  K  N  *  R  N  V  R  K  L  S  *  S  *  N  L  K  K  L  F  L  S  Q  N  L  R  G  V  Q  *  L  T  L  L  I  I  V  L  *  :  R  W  S  L  N  M  L  V  Q  E  *  R  E  M  L  *  H  *  I  L  *  R  R  C  W  M  T  S  K  T  R  R  T  C  I  R   : G  M  P  T  K  *  Y  C  K  Q  E  K  C  C  E  H  C  P  P  L  L  T  L  L  F  P  K  G  S  T  S  L  Y  V  V  M  Y  M  V  S :   F  M  T  S  *  I  F  S  S  S  M  G  F  H  Q  K  T  I  R  I  C  S  M  V  I  L  L  I  E  G  L  S  L  *  R  S  Y  *  H  Y  L  P  S  S  A  C  V  H  Q  :  L  Y  T  W  R  E  E  I  T  K  A  R  A  *  T  K  Y  M  G  L  R  A  R  S  D  P  S  *  V  K  Y  L  W  N  S  L  Q  K  C  S  V  A  Y  L  W  P  M  S  *  M  R  K  S  L  *  Y  M  E  V  F  L  V  L  M  A  *  S  S  L  I  L  E  Q  L  I  G  F  V  S  P  Q  K  R  :  G  *  C  V  N  C  C  G  V  I  H  N  L  S  L  V  E  D  L  V  N  E  V  L  V  F  L  S  G  E  T  *  L  K  D  S  C  R  K  I  I  *  :  I  *  W  C  D  L  M  K  *  R  M  K  V  M  R  L  S  M  T  A  N  S  *  R  C  F  P  L  P  I  I  V  T  R :   W  V  T  R  V  L  L  Y  D  L  R  L  P  I  *  S  Q  I  L  *  H  F  Q  Q  C :   H  I  L  M  S  N  Q  W  H  M  P  T  T  S  F  A  C  F  L  K  N  S  G  T  *  R  S  V  L  Q  S  M  R  P  F  V  *  L  T  K  S  I  H  I  R  R  Q  K  S  *  Y  L  Q  P  I  S  C  S  V  I  I  R  T  T  S  *  L  A  R  S  M  *  G  S  S  P  P  L  F  *  L  R  R  K  H  F  L  Y  D  N  N  V  V  W  W  I  V  L  C  I  I  Y  I  P  L  C  K  I  V  T  L  L  I  S  F  R  M  F  K  L  G  K  A  L  I  S  R  I  L  V  F  S  I  F  L  V  K  I  V  Y  N  F  F  P  T  Q  S  A  K  C  Y  C  Y  D  V  Y  F  T  I  G  L  S  F  V  C  A  C  G  Q  I  T  G  V  S  Y  *  F  C  F  V  I  N  N  A  *  Q  L  L  M  S  R  C  K  S  Y  Q  F  V  K  F  V  P  F  K  R  K  T  Y  G  S </first_frame>
            <second_frame>  F  S  K  V  S  V  F  F  D  K  P  P  K  R  H  K  K  S  I  H  E  N  S  S  I  V  T  S  H  A  T  S  T  Q  P  A  S  S  R  H  C  Y  A  R  Y  G  S  *  E  L  K  R  L  P  S  *  R  T  Q  A  T  R  K  *  S  I  Q  R :   A  *  V  F  A  S  Y  *  S  V  H  T  S  D  *  V  E  R  *  E  C  G  V  L  C  *  P  C  V  C  S  L  Q  I  G  G  I  W  K  R  N  T  G  W  N  *  S  Y  *  N  *  P  *  I  F  K   : G  L  L  *  E  R  S  C  I  F  G  N  G  E  V  Q  R  C  T  Q  G  F  S  T   : G  Q  E  I  M  S  K  R  P  R  C  Y  Q  K  I  E  G  M  *  E  S  C  H  E  A  K  I  *  R  S  Y  F  C  P  R  I  S  E  A  F  S  S  *  L  Y  *  L  S  F  C  R :   G  G  A  S  I  C  W  C  K  N  R  G  R  C  C  N  I  R  F  C  E  E  D  A  G  *  L  Q  K  P  E  E  L  A  *  E  :  V  C  L  P  N  S  T  A  N  K  R  N  V  A  S  T  A  L  P  C  *  H  C  C  S  R  R  E  A  L  H  C  M  W  *  C  T  W  S   : V  L  *  P  P  K  Y  F  R  A  Q  W  A  S  I  R  R  Q  S  V  S  V  Q  W  *  F  C  *  *  R  V  F  L  S  R  G  H  I  D  I  I  C  L  Q  V  H  V  S  I  S :   Y  T  P  G  E  R  K  S  R  K  Q  E  H  E  Q  N  I  W  V  *  G  R  G  Q  I  Q  V  K  *  N  I  C  G  T  L  C  R  S  V  L  L  L  T  F  G  P  C  H  K  *  E  S  L  C  S  T  W  R  S  F  *  C  *  W  R  E  A  L  *  Y  *  S  N  *  S  V  L  *  A  P  R  R  G :   V  N  V  *  I  V  V  E  *  S  T  T  S  A  W  *  R  T  *  *  T  R  C  W  S  F  F  R  G  R  R  N  *  K  I  L  A  G  K  *  S  R :   F  S  G  A  I  S  *  S  E  G  *  R  L  *  D  *  A  *  R  Q  T  H  N  G  V  F  R  S  Q  L  L  *  P   : D  G  *  Q  G  C  F  Y  T  I  *  G  S  R  Y  E  A  K  Y  C  D  I  F  S  S   : A  T  S  *  C  Q  T  N  G  I  C  Q  Q  L  P  S  H  V  F  L  K  T  L  E  P  N  V  Q  Y  Y  N  R  C  D  L  L  S  D  *  P  R  A  Y  T  S  G  G  K  R  A  S  T  Y  S  Q  L  A  A  V  S  L  F  G  Q  L  P  D  L  P  A  A  C  E  D  P  H  L  L  C  F  D  *  G  V  N  T  F  S  T  I  T  M  S  C  G  G  L  S  S  V  L  F  I  F  L  F  V  R  L  L  H  F  S  F  L  L  E  C  S  N  W  E  K  L  *  *  V  E  F  W  F  F  L  F  S  *  L  K  *  S  I  I  F  S  P  P  N  Q  P  S  V  T  V  T  M  S  I  L  P  L  D  C  R  L  S  V  P  V  A  R  L  L  V  F  P  T  D  F  V  S  L  L  I  M  L  N  S  F  *  *  V  D  A  N  P  I  N  L  *  S  L  Y  H  L  N  V  K  L  M  G   </second_frame>
            <third_frame>   L  A  K  S  Q  S  S  L  T  N  P  Q  S  A  I  K  R  V  F  M  K  I  P  V  L  *  L  R  T  Q  H  L  L  S  Q  P  P  V  A  I  V  M  P  G  M  E  A  E  N  S  N  A  S  R  A  E  E  L  K  Q  L  A  N  E  A  F  K   : G  H  K  Y  S  Q  A  I  D  L  Y  T  Q  A  I  E  L  N  G  E  N  A  V  Y  Y  A  N  R  A  F  A  H  S  K  L  E  E  Y  G  S  A  I  Q  D  G  T  R  A  I  E  I  D  P  R  Y  S  K  :  G  Y  Y  R  R  G  A  A  Y  L  A  M  G  K  F  K  D  A  L  K  D  F  Q  Q  :  V  K  K  L  C  P  N  D  P  D  A  T  K  K  L  K  E  C  E  K  A  V  M  K  L  K  F  E  E  A  I  S  V  P  E  S  Q  R  R  S  V  A  D  S  I  D  Y  R  S  V   : E  V  E  P  Q  Y  A  G  A  R  I  E  G  D  V  V  T  L  D  F  V  K  K  M  L  D  D  F  K  N  Q  K  N  L  H  K  R :   Y  A  Y  Q  I  V  L  Q  T  R  E  M  L  R  A  L  P  S  L  V  D  I  V  V  P  E  G  K  H  F  T  V  C  G  D  V  H  G  Q  :  F  Y  D  L  L  N  I  F  E  L  N  G  L  P  S  E  D  N  P  Y  L  F  N  G  D  F  V  D  R  G  S  F  S  L  E  V  I  L  T  L  F  A  F  K  C  M  C  P  S   : A  I  H  L  A  R  G  N  H  E  S  K  S  M  N  K  I  Y  G  F  E  G  E  V  R  S  K  L  S  E  I  F  V  E  L  F  A  E  V  F  C  C  L  P  L  A  H  V  I  N  E  K  V  F  V  V  H  G  G  L  F  S  V  D  G  V  K  L  S  D  I  R  A  I  D  R  F  C  E  P  P  E  E   : G  L  M  C  E  L  L  W  S  D  P  Q  P  Q  P  G  R  G  P  S  K  R  G  V  G  L  S  F  G  G  D  V  T  K  R  F  L  Q  E  N  N  L   : D  L  V  V  R  S  H  E  V  K  D  E  G  Y  E  I  E  H  D  G  K  L  I  T  V  F  S  A  P  N  Y  C  D  Q  :  M  G  N  K  G  A  F  I  R  F  E  A  P  D  M  K  P  N  I  V  T  F  S  A  V  :  P  H  P  D  V  K  P  M  A  Y  A  N  N  F  L  R  M  F  S  *  K  L  W  N  L  T  F  S  I  T  I  D  A  T  F  C  L  T  D  Q  E  H  T  H  Q  E  A  K  E  L  V  L  T  A  N  *  L  Q  C  H  Y  S  D  N  F  L  T  C  P  Q  H  V  R  I  L  T  S  F  V  L  I  K  A  *  T  L  S  L  R  *  Q  C  R  V  V  D  C  P  L  Y  Y  L  Y  S  S  L  *  D  C  Y  T  S  H  F  F  *  N  V  Q  I  G  K  S  F  D  K  S  N  F  G  F  F  Y  F  L  S  *  N  S  L  *  F  F  P  H  P  I  S  Q  V  L  L  L  R  C  L  F  Y  H  W  I  V  V  C  L  C  L  W  P  D  Y  W  C  F  L  L  I  L  F  R  Y  *  *  C  L  T  A  S  N  E  S  M  Q  I  L  S  I  C  K  V  C  T  I  *  T  *  N  L  W  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18800" stop="18677"/>
                    <exon start="18592" stop="18423"/>
                    <exon start="18337" stop="18266"/>
                    <exon start="17673" stop="17523"/>
                    <exon start="14733" stop="14625"/>
                    <exon start="14543" stop="14426"/>
                    <exon start="12809" stop="12662"/>
                    <exon start="11805" stop="11557"/>
                    <exon start="11043" stop="10918"/>
                    <exon start="10785" stop="10685"/>
                    <exon start="9683" stop="9609"/>
                    <exon start="9447" stop="9388"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1500</number_coding_nucleotides>
                  <number_encoded_amino_acids>500</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRTQHLLSQPPVAIVMPGMEAENSNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHSKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLKECEKAVMKLKFEEAISVPESQRRSVADSIDYRSVEVEPQYAGARIEGDVVTLDFVKKMLDDFKNQKNLHKRYAYQIVLQTREMLRALPSLVDIVVPEGKHFTVCGDVHGQFYDLLNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLFAFKCMCPSAIHLARGNHESKSMNKIYGFEGEVRSKLSEIFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPQPGRGPSKRGVGLSFGGDVTKRFLQENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMFS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9206" stop="8919"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRRKHFLYDNNVVWWIVLCIIYIPLCKIVTLLISFRMFKLGKALISRILVFSIFLVKIVYNFFPTQSAKCYCYDVYFTIGLSFVCACGQITGVSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="18851" e_stop="18677"/>
            <exon e_start="18592" e_stop="18423"/>
            <exon e_start="18337" e_stop="18266"/>
            <exon e_start="17673" e_stop="17523"/>
            <exon e_start="16549" e_stop="16337"/>
            <exon e_start="14733" e_stop="14625"/>
            <exon e_start="14543" e_stop="14426"/>
            <exon e_start="12809" e_stop="12662"/>
            <exon e_start="11805" e_stop="11557"/>
            <exon e_start="11043" e_stop="10918"/>
            <exon e_start="10785" e_stop="10685"/>
            <exon e_start="9683" e_stop="9609"/>
            <exon e_start="9447" e_stop="8817"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18851" e_stop="18677" e_length="175"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18676" i_stop="18593" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18592" e_stop="18423" e_length="170"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="18422" i_stop="18338" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18337" e_stop="18266" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18265" i_stop="17674" i_length="592"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17673" e_stop="17523" e_length="151"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.996">
            <gDNA_intron_boundary i_start="17522" i_stop="16550" i_length="973"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="16549" e_stop="16337" e_length="213"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="16336" i_stop="14734" i_length="1603"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="14733" e_stop="14625" e_length="109"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="14624" i_stop="14544" i_length="81"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="14543" e_stop="14426" e_length="118"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.954">
            <gDNA_intron_boundary i_start="14425" i_stop="12810" i_length="1616"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="12809" e_stop="12662" e_length="148"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.814">
            <gDNA_intron_boundary i_start="12661" i_stop="11806" i_length="856"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="11805" e_stop="11557" e_length="249"/>
          </exon>
          <intron i_serial="9" don_prob="0.983" acc_prob="0.920">
            <gDNA_intron_boundary i_start="11556" i_stop="11044" i_length="513"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="11043" e_stop="10918" e_length="126"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10917" i_stop="10786" i_length="132"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="10785" e_stop="10685" e_length="101"/>
          </exon>
          <intron i_serial="11" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="10684" i_stop="9684" i_length="1001"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="9683" e_stop="9609" e_length="75"/>
          </exon>
          <intron i_serial="12" don_prob="0.989" acc_prob="0.982">
            <gDNA_intron_boundary i_start="9608" i_stop="9448" i_length="161"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="9447" e_stop="8817" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18851" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18849" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18840" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18832" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18826" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="16549" stop="16337"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18755" stop="18677"/>
              <exon start="18592" stop="18423"/>
              <exon start="18337" stop="18266"/>
              <exon start="17673" stop="17523"/>
              <exon start="16549" stop="16337"/>
              <exon start="14733" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14657" stop="14625"/>
              <exon start="14543" stop="14426"/>
              <exon start="12809" stop="12662"/>
              <exon start="11805" stop="11581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12762" stop="12662"/>
              <exon start="11805" stop="11557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11765" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592794" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11692" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11661" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11643" stop="11557"/>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589540" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11043" stop="10918"/>
              <exon start="10785" stop="10685"/>
              <exon start="9683" stop="9609"/>
              <exon start="9447" stop="9099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558992" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="8926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="8947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="8967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="9019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238224" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="9045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237493" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9677" stop="9609"/>
              <exon start="9447" stop="9074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9660" stop="9609"/>
              <exon start="9447" stop="8979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9659" stop="9609"/>
              <exon start="9447" stop="8817"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377580" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9659" stop="9609"/>
              <exon start="9447" stop="8820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9659" stop="9609"/>
              <exon start="9447" stop="8874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232056" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCCCCAAAGCGCCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCAGCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAG : GGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGATATTCAAAG : GGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAG : GTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAG : GATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAG : AGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAG : GTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGATGTACATGGTCAG : TTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAG : CTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGG : GGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAG : ATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAG : ATGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTG : CCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTTGTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATTAGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCACCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGGATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTTAGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTAGTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTCTATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTACTGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTATCAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGGTCA</gDNA_template>
            <first_frame> N  P  Q  S  A  I  K  R  V  F  M  K  I  P  V  L  *  L  R  T  Q  H  L  L  S  Q  P  P  V  A  I  V  M  P  G  M  E  A  E  N  S  N  A  S  R  A  E  E  L  K  Q  L  A  N  E  A  F  K   : G  H  K  Y  S  Q  A  I  D  L  Y  T  Q  A  I  E  L  N  G  E  N  A  V  Y  Y  A  N  R  A  F  A  H  S  K  L  E  E  Y  G  S  A  I  Q  D  G  T  R  A  I  E  I  D  P  R  Y  S  K  :  G  Y  Y  R  R  G  A  A  Y  L  A  M  G  K  F  K  D  A  L  K  D  F  Q  Q  :  V  K  K  L  C  P  N  D  P  D  A  T  K  K  L  K  E  C  E  K  A  V  M  K  L  K  F  E  E  A  I  S  V  P  E  S  Q  R  R  S  V  A  D  S  I  D  Y  R  S  V   : G  S  G  P  G  S  S  Y  V  P  T  K  T  T  A  V  S  A  A  A  A  L  M  G  V  L  V  V  Y  M  G  T  K  A  A  T  M  V  A  A  A  A  S  A  A  L  L  V  V  L  I  T  F  L  W  G  R  C  S  D  G  F  F  T  K  S  R  T  L  E  L   : E  V  E  P  Q  Y  A  G  A  R  I  E  G  D  V  V  T  L  D  F  V  K  K  M  L  D  D  F  K  N  Q  K  N  L  H  K  R :   Y  A  Y  Q  I  V  L  Q  T  R  E  M  L  R  A  L  P  S  L  V  D  I  V  V  P  E  G  K  H  F  T  V  C  G  D  V  H  G  Q  :  F  Y  D  L  L  N  I  F  E  L  N  G  L  P  S  E  D  N  P  Y  L  F  N  G  D  F  V  D  R  G  S  F  S  L  E  V  I  L  T  L  F  A  F  K  C  M  C  P  S   : A  I  H  L  A  R  G  N  H  E  S  K  S  M  N  K  I  Y  G  F  E  G  E  V  R  S  K  L  S  E  I  F  V  E  L  F  A  E  V  F  C  C  L  P  L  A  H  V  I  N  E  K  V  F  V  V  H  G  G  L  F  S  V  D  G  V  K  L  S  D  I  R  A  I  D  R  F  C  E  P  P  E  E   : G  L  M  C  E  L  L  W  S  D  P  Q  P  Q  P  G  R  G  P  S  K  R  G  V  G  L  S  F  G  G  D  V  T  K  R  F  L  Q  E  N  N  L   : D  L  V  V  R  S  H  E  V  K  D  E  G  Y  E  I  E  H  D  G  K  L  I  T  V  F  S  A  P  N  Y  C  D  Q  :  M  G  N  K  G  A  F  I  R  F  E  A  P  D  M  K  P  N  I  V  T  F  S  A  V  :  P  H  P  D  V  K  P  M  A  Y  A  N  N  F  L  R  M  F  S  *  K  L  W  N  L  T  F  S  I  T  I  D  A  T  F  C  L  T  D  Q  E  H  T  H  Q  E  A  K  E  L  V  L  T  A  N  *  L  Q  C  H  Y  S  D  N  F  L  T  C  P  Q  H  V  R  I  L  T  S  F  V  L  I  K  A  *  T  L  S  L  R  *  Q  C  R  V  V  D  C  P  L  Y  Y  L  Y  S  S  L  *  D  C  Y  T  S  H  F  F  *  N  V  Q  I  G  K  S  F  D  K  S  N  F  G  F  F  Y  F  L  S  *  N  S  L  *  F  F  P  H  P  I  S  Q  V  L  L  L  R  C  L  F  Y  H  W  I  V  V  C  L  C  L  W  P  D  Y  W  C  F  L  L  I  L  F  R  Y  *  *  C  L  T  A  S  N  E  S  M  Q  I  L  S  I  C  K  V  C  T  I  *  T  *  N  L  W  V  </first_frame>
            <second_frame>  T  P  K  A  P  *  K  E  Y  S  *  K  F  Q  Y  C  D  F  A  R  N  I  Y  S  A  S  L  Q  S  P  L  L  C  P  V  W  K  L  R  T  Q  T  P  P  E  L  K  N  S  S  N  S  Q  M  K  H  S  K  :  G  I  S  I  R  K  L  L  I  C  T  H  K  R  L  S  *  T  V  R  M  R  C  T  M  L  T  V  R  L  L  T  P  N  W  R  N  M  E  A  Q  Y  R  M  E  L  E  L  L  K  L  T  L  D  I  Q  R :   V  I  I  G  E  E  L  H  I  W  Q  W  G  S  S  K  M  H  S  R  I  F  N  R :   S  R  N  Y  V  Q  T  T  Q  M  L  P  K  N  *  R  N  V  R  K  L  S  *  S  *  N  L  K  K  L  F  L  S  Q  N  L  R  G  V  Q  *  L  T  L  L  I  I  V  L  *  :  D  Q  A  L  A  H  H  M  F  P  P  K  Q  L  L  Y  Q  R  Q  Q  H  *  W  E  F  W  W  Y  I  W  G  L  R  Q  P  Q  W  W  Q  Q  Q  L  R  Q  P  Y  W  W  S  *  *  H  F  F  G  D  V  A  V  M  V  S  L  P  R  V  E  H  L  N  *  :  R  W  S  L  N  M  L  V  Q  E  *  R  E  M  L  *  H  *  I  L  *  R  R  C  W  M  T  S  K  T  R  R  T  C  I  R   : G  M  P  T  K  *  Y  C  K  Q  E  K  C  C  E  H  C  P  P  L  L  T  L  L  F  P  K  G  S  T  S  L  Y  V  V  M  Y  M  V  S :   F  M  T  S  *  I  F  S  S  S  M  G  F  H  Q  K  T  I  R  I  C  S  M  V  I  L  L  I  E  G  L  S  L  *  R  S  Y  *  H  Y  L  P  S  S  A  C  V  H  Q  :  L  Y  T  W  R  E  E  I  T  K  A  R  A  *  T  K  Y  M  G  L  R  A  R  S  D  P  S  *  V  K  Y  L  W  N  S  L  Q  K  C  S  V  A  Y  L  W  P  M  S  *  M  R  K  S  L  *  Y  M  E  V  F  L  V  L  M  A  *  S  S  L  I  L  E  Q  L  I  G  F  V  S  P  Q  K  R  :  G  *  C  V  N  C  C  G  V  I  H  N  L  S  L  V  E  D  L  V  N  E  V  L  V  F  L  S  G  E  T  *  L  K  D  S  C  R  K  I  I  *  :  I  *  W  C  D  L  M  K  *  R  M  K  V  M  R  L  S  M  T  A  N  S  *  R  C  F  P  L  P  I  I  V  T  R :   W  V  T  R  V  L  L  Y  D  L  R  L  P  I  *  S  Q  I  L  *  H  F  Q  Q  C :   H  I  L  M  S  N  Q  W  H  M  P  T  T  S  F  A  C  F  L  K  N  S  G  T  *  R  S  V  L  Q  S  M  R  P  F  V  *  L  T  K  S  I  H  I  R  R  Q  K  S  *  Y  L  Q  P  I  S  C  S  V  I  I  R  T  T  S  *  L  A  R  S  M  *  G  S  S  P  P  L  F  *  L  R  R  K  H  F  L  Y  D  N  N  V  V  W  W  I  V  L  C  I  I  Y  I  P  L  C  K  I  V  T  L  L  I  S  F  R  M  F  K  L  G  K  A  L  I  S  R  I  L  V  F  S  I  F  L  V  K  I  V  Y  N  F  F  P  T  Q  S  A  K  C  Y  C  Y  D  V  Y  F  T  I  G  L  S  F  V  C  A  C  G  Q  I  T  G  V  S  Y  *  F  C  F  V  I  N  N  A  *  Q  L  L  M  S  R  C  K  S  Y  Q  F  V  K  F  V  P  F  K  R  K  T  Y  G  S </second_frame>
            <third_frame>   P  P  K  R  H  K  K  S  I  H  E  N  S  S  I  V  T  S  H  A  T  S  T  Q  P  A  S  S  R  H  C  Y  A  R  Y  G  S  *  E  L  K  R  L  P  S  *  R  T  Q  A  T  R  K  *  S  I  Q  R :   A  *  V  F  A  S  Y  *  S  V  H  T  S  D  *  V  E  R  *  E  C  G  V  L  C  *  P  C  V  C  S  L  Q  I  G  G  I  W  K  R  N  T  G  W  N  *  S  Y  *  N  *  P  *  I  F  K   : G  L  L  *  E  R  S  C  I  F  G  N  G  E  V  Q  R  C  T  Q  G  F  S  T   : G  Q  E  I  M  S  K  R  P  R  C  Y  Q  K  I  E  G  M  *  E  S  C  H  E  A  K  I  *  R  S  Y  F  C  P  R  I  S  E  A  F  S  S  *  L  Y  *  L  S  F  C  R :   I  R  P  W  L  I  I  C  S  H  Q  N  N  C  C  I  S  G  S  S  T  N  G  S  S  G  G  I  Y  G  D  *  G  S  H  N  G  G  S  S  S  F  G  S  L  I  G  G  L  D  N  I  S  L  G  T  L  Q  *  W  F  L  Y  Q  E  S  N  T  *  I  R :   G  G  A  S  I  C  W  C  K  N  R  G  R  C  C  N  I  R  F  C  E  E  D  A  G  *  L  Q  K  P  E  E  L  A  *  E  :  V  C  L  P  N  S  T  A  N  K  R  N  V  A  S  T  A  L  P  C  *  H  C  C  S  R  R  E  A  L  H  C  M  W  *  C  T  W  S   : V  L  *  P  P  K  Y  F  R  A  Q  W  A  S  I  R  R  Q  S  V  S  V  Q  W  *  F  C  *  *  R  V  F  L  S  R  G  H  I  D  I  I  C  L  Q  V  H  V  S  I  S :   Y  T  P  G  E  R  K  S  R  K  Q  E  H  E  Q  N  I  W  V  *  G  R  G  Q  I  Q  V  K  *  N  I  C  G  T  L  C  R  S  V  L  L  L  T  F  G  P  C  H  K  *  E  S  L  C  S  T  W  R  S  F  *  C  *  W  R  E  A  L  *  Y  *  S  N  *  S  V  L  *  A  P  R  R  G :   V  N  V  *  I  V  V  E  *  S  T  T  S  A  W  *  R  T  *  *  T  R  C  W  S  F  F  R  G  R  R  N  *  K  I  L  A  G  K  *  S  R :   F  S  G  A  I  S  *  S  E  G  *  R  L  *  D  *  A  *  R  Q  T  H  N  G  V  F  R  S  Q  L  L  *  P   : D  G  *  Q  G  C  F  Y  T  I  *  G  S  R  Y  E  A  K  Y  C  D  I  F  S  S   : A  T  S  *  C  Q  T  N  G  I  C  Q  Q  L  P  S  H  V  F  L  K  T  L  E  P  N  V  Q  Y  Y  N  R  C  D  L  L  S  D  *  P  R  A  Y  T  S  G  G  K  R  A  S  T  Y  S  Q  L  A  A  V  S  L  F  G  Q  L  P  D  L  P  A  A  C  E  D  P  H  L  L  C  F  D  *  G  V  N  T  F  S  T  I  T  M  S  C  G  G  L  S  S  V  L  F  I  F  L  F  V  R  L  L  H  F  S  F  L  L  E  C  S  N  W  E  K  L  *  *  V  E  F  W  F  F  L  F  S  *  L  K  *  S  I  I  F  S  P  P  N  Q  P  S  V  T  V  T  M  S  I  L  P  L  D  C  R  L  S  V  P  V  A  R  L  L  V  F  P  T  D  F  V  S  L  L  I  M  L  N  S  F  *  *  V  D  A  N  P  I  N  L  *  S  L  Y  H  L  N  V  K  L  M  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18800" stop="18677"/>
                    <exon start="18592" stop="18423"/>
                    <exon start="18337" stop="18266"/>
                    <exon start="17673" stop="17523"/>
                    <exon start="16549" stop="16337"/>
                    <exon start="14733" stop="14625"/>
                    <exon start="14543" stop="14426"/>
                    <exon start="12809" stop="12662"/>
                    <exon start="11805" stop="11557"/>
                    <exon start="11043" stop="10918"/>
                    <exon start="10785" stop="10685"/>
                    <exon start="9683" stop="9609"/>
                    <exon start="9447" stop="9388"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1713</number_coding_nucleotides>
                  <number_encoded_amino_acids>571</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRTQHLLSQPPVAIVMPGMEAENSNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHSKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATKKLKECEKAVMKLKFEEAISVPESQRRSVADSIDYRSVGSGPGSSYVPTKTTAVSAAAALMGVLVVYMGTKAATMVAAAASAALLVVLITFLWGRCSDGFFTKSRTLELEVEPQYAGARIEGDVVTLDFVKKMLDDFKNQKNLHKRYAYQIVLQTREMLRALPSLVDIVVPEGKHFTVCGDVHGQFYDLLNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLFAFKCMCPSAIHLARGNHESKSMNKIYGFEGEVRSKLSEIFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPQPGRGPSKRGVGLSFGGDVTKRFLQENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMFS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9206" stop="8919"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRRKHFLYDNNVVWWIVLCIIYIPLCKIVTLLISFRMFKLGKALISRILVFSIFLVKIVYNFFPTQSAKCYCYDVYFTIGLSFVCACGQITGVSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="29367" PGL_stop="30230"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29367" e_stop="30230"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="29367" e_stop="30230" e_length="864"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29367" stop="30230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29367" stop="30197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552705" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTATTCTTTTTTTAATCAATGACCTCTTATAGCTGCACGAAAGCAAAAAAATGAAAAATAAAATAAAAGGAAGCTTGGAGGAAAGAATACCCGCAAATGTCTTTGTTTTATTAATTTATAGCTACATGAAGAGAAAAAAGTATTTATAAGCTAGTAGAAGAAGTACAAACAAATACATATTCAGGTTTGGCCTTTAAACCCTCTGTTATGGGAGGAACTTTGGAACAAAAAGTGAAGAAAATTCCTGTAACATTCCTTCCATAGTCTCTCTGGGAAATTGATTATCAACACTTGCCTATCTGTTCATTATAGTCTCTCTGGGATATTGATTATCAACACTTGCCTATCTGTTCATTCTTACTGCCATGTTTATTATTGTAACAAATGAGGAATGTTGTGTTTGTACTGTTTTAAACTATATATGAAAACAAAAGGATAGTCTCGTGCGCTAACCTCTCGTTACTTAGGGGTCCAGGGAAGGGCTGGAACCATATTGGGTATATGTACACAATCTTACTACTTGGCATTTCAGTAAGAAGTTGTTTCCACAGCTTGAAACAATGACTTTGTGGTTGCAGTACACCACTTATCATTGTGCCAAGCCCACCTTCTATTAAATCATCTTTGAATGAACGCAAAAATATATTTTGACTTCAATCAGTGCCCAATGTAGTCAACTTGGCATTCTTCACAAGTTTTTGTACAGTGTGTGAGCTTCATGACCACTTTCTCAGCTTCTAATTGTGTTACTTGCAGGCATGGGCACTTAATTTTTTTCAGAAACTGAAGGCCGTCTTGAAGTTTGATCATTCAAATTCAAAGAGTCACTGGTCTCGCCCAACCTTCTGATGAGATGTGCTTG</gDNA_template>
            <first_frame> G  Y  S  F  F  N  Q  *  P  L  I  A  A  R  K  Q  K  N  E  K  *  N  K  R  K  L  G  G  K  N  T  R  K  C  L  C  F  I  N  L  *  L  H  E  E  K  K  V  F  I  S  *  *  K  K  Y  K  Q  I  H  I  Q  V  W  P  L  N  P  L  L  W  E  E  L  W  N  K  K  *  R  K  F  L  *  H  S  F  H  S  L  S  G  K  L  I  I  N  T  C  L  S  V  H  Y  S  L  S  G  I  L  I  I  N  T  C  L  S  V  H  S  Y  C  H  V  Y  Y  C  N  K  *  G  M  L  C  L  Y  C  F  K  L  Y  M  K  T  K  G  *  S  R  A  L  T  S  R  Y  L  G  V  Q  G  R  A  G  T  I  L  G  I  C  T  Q  S  Y  Y  L  A  F  Q  *  E  V  V  S  T  A  *  N  N  D  F  V  V  A  V  H  H  L  S  L  C  Q  A  H  L  L  L  N  H  L  *  M  N  A  K  I  Y  F  D  F  N  Q  C  P  M  *  S  T  W  H  S  S  Q  V  F  V  Q  C  V  S  F  M  T  T  F  S  A  S  N  C  V  T  C  R  H  G  H  L  I  F  F  R  N  *  R  P  S  *  S  L  I  I  Q  I  Q  R  V  T  G  L  A  Q  P  S  D  E  M  C  L </first_frame>
            <second_frame>  V  I  L  F  L  I  N  D  L  L  *  L  H  E  S  K  K  M  K  N  K  I  K  G  S  L  E  E  R  I  P  A  N  V  F  V  L  L  I  Y  S  Y  M  K  R  K  K  Y  L  *  A  S  R  R  S  T  N  K  Y  I  F  R  F  G  L  *  T  L  C  Y  G  R  N  F  G  T  K  S  E  E  N  S  C  N  I  P  S  I  V  S  L  G  N  *  L  S  T  L  A  Y  L  F  I  I  V  S  L  G  Y  *  L  S  T  L  A  Y  L  F  I  L  T  A  M  F  I  I  V  T  N  E  E  C  C  V  C  T  V  L  N  Y  I  *  K  Q  K  D  S  L  V  R  *  P  L  V  T  *  G  S  R  E  G  L  E  P  Y  W  V  Y  V  H  N  L  T  T  W  H  F  S  K  K  L  F  P  Q  L  E  T  M  T  L  W  L  Q  Y  T  T  Y  H  C  A  K  P  T  F  Y  *  I  I  F  E  *  T  Q  K  Y  I  L  T  S  I  S  A  Q  C  S  Q  L  G  I  L  H  K  F  L  Y  S  V  *  A  S  *  P  L  S  Q  L  L  I  V  L  L  A  G  M  G  T  *  F  F  S  E  T  E  G  R  L  E  V  *  S  F  K  F  K  E  S  L  V  S  P  N  L  L  M  R  C  A   </second_frame>
            <third_frame>   L  F  F  F  *  S  M  T  S  Y  S  C  T  K  A  K  K  *  K  I  K  *  K  E  A  W  R  K  E  Y  P  Q  M  S  L  F  Y  *  F  I  A  T  *  R  E  K  S  I  Y  K  L  V  E  E  V  Q  T  N  T  Y  S  G  L  A  F  K  P  S  V  M  G  G  T  L  E  Q  K  V  K  K  I  P  V  T  F  L  P  *  S  L  W  E  I  D  Y  Q  H  L  P  I  C  S  L  *  S  L  W  D  I  D  Y  Q  H  L  P  I  C  S  F  L  L  P  C  L  L  L  *  Q  M  R  N  V  V  F  V  L  F  *  T  I  Y  E  N  K  R  I  V  S  C  A  N  L  S  L  L  R  G  P  G  K  G  W  N  H  I  G  Y  M  Y  T  I  L  L  L  G  I  S  V  R  S  C  F  H  S  L  K  Q  *  L  C  G  C  S  T  P  L  I  I  V  P  S  P  P  S  I  K  S  S  L  N  E  R  K  N  I  F  *  L  Q  S  V  P  N  V  V  N  L  A  F  F  T  S  F  C  T  V  C  E  L  H  D  H  F  L  S  F  *  L  C  Y  L  Q  A  W  A  L  N  F  F  Q  K  L  K  A  V  L  K  F  D  H  S  N  S  K  S  H  W  S  R  P  T  F  *  *  D  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C07HBa0023C09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="53452" PGL_stop="54182"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53452" e_stop="54182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="53452" e_stop="54182" e_length="731"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53452" stop="54182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGATCAACAAAATCTCACCGTGCATCCTGTGCTGGGAATACTGAAAGGCATGGTTGCTTGCTCTCCTAGTATCCAAATCAATCAGGCCATTCCAAGGCCTCAAGTTTGTCCTCCTCACTTCAGTCACCAAATTGATTCGGTGCAGCAAAATTGTTTAGGTGCAATCAAACAAAGCCCTTTCACCCTGTATAATCAGAAAGCAAATTTTGAGGAGCCTTTTCCAGGTGGATATAAATCTTTCACAATCAGCCCATATGGACCTGTACCAACATTAATGCATCATTACTCCAGCCAGAATGGGGGCTCGAGCTCTCTTGATCTGAACAGCTCAAGCTGTGCCATCAACTTTCCTTACTCACGTCTAGATTCCGGAAGGAACTTCCGATCATCGTGGTCTCAGTTCTCTACAGAAAGCACCCCATGGTTTTCAGATGCAAAACAAAAGAAACTACTAATGGATTTTCATGAATTATATTCTTCATCTGACAGGAAACATCATTACTGCAGCAGCATTACTGGGGATAGCCGTCAAACTGACCCTTCACTATATCTTGCATCAGAGCGCTTCTGTTCTTTCACTCAGCGCCCTCAACATGCATTGGGGAATCCAGTCTCTCTACCATCTTTAGCTAACAATGTCCCTATGCCACTCCAAATAGGTTCCAGAGTAAACACTGGCTCATATAAAAGAAATGGTGACGTGACCAAAATCATATCTACTCCTTGTCTT</gDNA_template>
            <first_frame> M  I  N  K  I  S  P  C  I  L  C  W  E  Y  *  K  A  W  L  L  A  L  L  V  S  K  S  I  R  P  F  Q  G  L  K  F  V  L  L  T  S  V  T  K  L  I  R  C  S  K  I  V  *  V  Q  S  N  K  A  L  S  P  C  I  I  R  K  Q  I  L  R  S  L  F  Q  V  D  I  N  L  S  Q  S  A  H  M  D  L  Y  Q  H  *  C  I  I  T  P  A  R  M  G  A  R  A  L  L  I  *  T  A  Q  A  V  P  S  T  F  L  T  H  V  *  I  P  E  G  T  S  D  H  R  G  L  S  S  L  Q  K  A  P  H  G  F  Q  M  Q  N  K  R  N  Y  *  W  I  F  M  N  Y  I  L  H  L  T  G  N  I  I  T  A  A  A  L  L  G  I  A  V  K  L  T  L  H  Y  I  L  H  Q  S  A  S  V  L  S  L  S  A  L  N  M  H  W  G  I  Q  S  L  Y  H  L  *  L  T  M  S  L  C  H  S  K  *  V  P  E  *  T  L  A  H  I  K  E  M  V  T  *  P  K  S  Y  L  L  L  V   </first_frame>
            <second_frame>  *  S  T  K  S  H  R  A  S  C  A  G  N  T  E  R  H  G  C  L  L  S  *  Y  P  N  Q  S  G  H  S  K  A  S  S  L  S  S  S  L  Q  S  P  N  *  F  G  A  A  K  L  F  R  C  N  Q  T  K  P  F  H  P  V  *  S  E  S  K  F  *  G  A  F  S  R  W  I  *  I  F  H  N  Q  P  I  W  T  C  T  N  I  N  A  S  L  L  Q  P  E  W  G  L  E  L  S  *  S  E  Q  L  K  L  C  H  Q  L  S  L  L  T  S  R  F  R  K  E  L  P  I  I  V  V  S  V  L  Y  R  K  H  P  M  V  F  R  C  K  T  K  E  T  T  N  G  F  S  *  I  I  F  F  I  *  Q  E  T  S  L  L  Q  Q  H  Y  W  G  *  P  S  N  *  P  F  T  I  S  C  I  R  A  L  L  F  F  H  S  A  P  S  T  C  I  G  E  S  S  L  S  T  I  F  S  *  Q  C  P  Y  A  T  P  N  R  F  Q  S  K  H  W  L  I  *  K  K  W  *  R  D  Q  N  H  I  Y  S  L  S  </second_frame>
            <third_frame>   D  Q  Q  N  L  T  V  H  P  V  L  G  I  L  K  G  M  V  A  C  S  P  S  I  Q  I  N  Q  A  I  P  R  P  Q  V  C  P  P  H  F  S  H  Q  I  D  S  V  Q  Q  N  C  L  G  A  I  K  Q  S  P  F  T  L  Y  N  Q  K  A  N  F  E  E  P  F  P  G  G  Y  K  S  F  T  I  S  P  Y  G  P  V  P  T  L  M  H  H  Y  S  S  Q  N  G  G  S  S  S  L  D  L  N  S  S  S  C  A  I  N  F  P  Y  S  R  L  D  S  G  R  N  F  R  S  S  W  S  Q  F  S  T  E  S  T  P  W  F  S  D  A  K  Q  K  K  L  L  M  D  F  H  E  L  Y  S  S  S  D  R  K  H  H  Y  C  S  S  I  T  G  D  S  R  Q  T  D  P  S  L  Y  L  A  S  E  R  F  C  S  F  T  Q  R  P  Q  H  A  L  G  N  P  V  S  L  P  S  L  A  N  N  V  P  M  P  L  Q  I  G  S  R  V  N  T  G  S  Y  K  R  N  G  D  V  T  K  I  I  S  T  P  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0023C09.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53454" stop="54182"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQQNLTVHPVLGILKGMVACSPSIQINQAIPRPQVCPPHFSHQIDSVQQNCLGAIKQSPFTLYNQKANFEEPFPGGYKSFTISPYGPVPTLMHHYSSQNGGSSSLDLNSSSCAINFPYSRLDSGRNFRSSWSQFSTESTPWFSDAKQKKLLMDFHELYSSSDRKHHYCSSITGDSRQTDPSLYLASERFCSFTQRPQHALGNPVSLPSLANNVPMPLQIGSRVNTGSYKRNGDVTKIISTPCL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 80 chains have been computed
$ 
$ memory statistics:
$ 131384 bytes spliced alignments in total
$ 59 spliced alignments have been stored
$ 2226 bytes was the average size of a spliced alignment
$ 12144 bytes predicted gene locations in total
$ 5 predicted gene locations have been stored
$ 2428 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 85 backtrace matrices have been allocated
$ 
$ date finished: 2008-02-20 09:03:49
-->
