<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-26 23:30:37"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0073N22-Otyy8/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-wVeaik/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-wVeaik/lycopersicum_combined_unigene_seqs" ref_id="SGN-U334498" ref_strand="-" ref_description="SGN-U334498        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | isocitrate lyase, putative, similar to isocitrate lyase GI:167144 from (Brassica napus) | chr3:7652511-7655950 REVERSE | Aliases: MSD21.4(evalue: 2e-49, score=187) genbank/nr: gi|1351841|sp|P49297|ACEA_LYCES Isocitrate lyase (Isocitrase) (Isocitratase) (ICL) gi|7436643|pir||T06353 isocitrate lyase (EC 4.1.3.1) - tomato gi|624211|gb|AAA82738.1| isocitrate lyase(evalue: 1e-57, score=218)">
      <seq>acgtttgccaaggatttcgccaggaggggaatgttggcctatgtggaaaaaatacaaaaaaaggaaaggagcaatggggttgatacattgggtcatcaaaaatggtttgggggtaattactatgataaagttttaaggactgtccagggaggcatcccttcaactgctgctatgggaaaaggggtaacttaggagccatttgaggaaaaatgggcaagggctggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaaaaaaatcccccccccccaacaaaaaaaaaagtgattttttttggagggtgaaaatttgtggagctttggaactatttcaatttttaggttgtgaacttcaaggacaataaaaaatgttttttaagccttttaaataatttttcagggatttgaatccttttgggccttattttgaccttcaaattgcccactagggggatcctttggatttttatttatatttggacttcccagttgtggtaaagttttcagttgcttattaatggaatattttttggtgctttttcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-Otyy8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="583" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="883" g_stop="1063" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1551" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="567" r_length="386" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="568" polyA_stop="612"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-U334498" ref_strand="-">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334498" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="883" e_stop="1063"/>
          <exon e_start="1166" e_stop="1551"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAA</genome_strand>
        <mrna_strand>ACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAAAAAATACAAAAAAAGGAAAGGAGCAATGGGGTTGATACATTGGGTCATCAAAAATGGTTTGGGGGTAATTACTATGATAAAGTTTTAAGGACTGTCCAGGGAGGCATCCCTTCAACTGCTGCTATGGGAAAAG......................................................................................................GGGTAACTTAGGAGCCATTTGAGGAAAAATGGGCAAGGGCTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAAAAAATCCCCCCCCCCCAACAAAAAAAAAAGTGATTTTTTTTGGAGGGTGAAAATTTGTGGAGCTTTGGAACTATTTCAATTTTTAGGTTGTGAACTTCAAGGACAATAAAAAATGTTTTTTAAGCCTTTTAAATAATTTTTCAGGGATTTGAATCCTTTTGGGCCTTATTTTGACCTTCAAATTGCCCACTAGGGGGATCCTTTGGATTTTTATTTATATTTGGACTTCCCAGTTGTGGTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGGTGCTTTTTCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-wVeaik/lycopersicum_combined_unigene_seqs" ref_id="SGN-U312610" ref_strand="+" ref_description="SGN-U312610        Tomato 200607 #1 [49 ESTs aligned] arabidopsis/peptide: | Symbol: None | aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative, nearly identical to SP:P49608 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Cucurbita maxima}; contains Pfam profiles PF00330: Aconitase family (aconitate hydratase), PF00694: Aconitase C-terminal domain | chr2:2141396-2146675 FORWARD | Aliases: T3P4.5, T3P4_5(evalue: 0, score=1623) genbank/nr: gi|30407706|gb|AAP30039.1| aconitase [Lycopersicon pennellii](evalue: 0, score=1759)">
      <seq>attttagctccatttgatgtgccgcagcttcggcactgtcctttaccatatcagtaatcaataattcaaatcgccatatcttcttcgtcactatcttcatcttcttcctcatcagcaatttccctttttttgtttgggcacacaaccctaggaggttaccattgaatgtgatttgagaaaaaaaaaactatatatatacatattgggagtcatgtatagtaatacagctcgcaagtactcttcttctgctgcttcttcattattgagagcatcttcttctgttacaaggccgcttgcttcaacttctactgctgctcacgcgccttgtcgtgctggtgctgcttctggtaatcagcagcgttattcatcaacgcttcggtctctgcgttgctctgtgccgaggtggagtcacggtgttgattggaagtctccgatcagtcttactgctcagatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcagagaacccatttaagggaatcctcactggtcttccaaagcccggaggtggtgaattcggaaagttctatagcttacctgcgctcaatgatcccaggattgacaagctaccatactctatcagaattcttctcgaatcagcaatccgtaattgtgacaactttcaagtgaaaaaggaagatgttgagaagattattgactgggaaaattctgcacctaagcttgtggagatacccttcaagcctgcccgtgtcttgctgcaggattttactggtgtaccagctgtggtggaccttgcttgcatgcgtgatgccatgaacaaccttggcagtgattctgacaagattaatccattggttcctgtcgacctagttattgatcactcagttcaagttgatgtaacaaggtcagaaaatgcagtccaggctaatatggagcttgaattccaaaggaataaggagagatttgccttccttaagtggggatccaatgctttccaaaacatgcttgttgttccacctgggtctggtattgtgcatcaggtgaatcttgaatatcttggaagggttgtgttcaatagggaaggcttgctctacccagatagcgtggtcggaacagattcccacaccactatgattgatgggttaggagttgctggctggggtgtcggaggtattgaggcagaagctgcaatgcttggccagccaatgagcatggtgttgcctggagttgtcgggttcaagctatcagggaatttgcgaaatggtgtaactgccactgacttggttctgactgtcactcaaatgctgaggaagcatggtgttgttggaaagtttgttgaattctatggtgagggaatgagtggtctttcattggctgacagggccaccattgcaaacatggctcctgaatatggtgcaacaatgggtttcttccctgtagatcatgttactttgcaatacctcaagttaacagggagaagtgatgaaacagttggaatggtagagtcatatctccgtgcaaataatatgtttgtcgattataaagagcctcaacaagaaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatagggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccctgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgttttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttcaaaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-Otyy8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23508" stop="13316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23208" g_stop="22702" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22182" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="611" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22091" g_stop="21931" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="772" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21930" i_stop="21841" i_length="90">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21840" g_stop="21748" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="773" r_stop="865" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21747" i_stop="21522" i_length="226">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21521" g_stop="21336" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="866" r_stop="1051" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21117" g_stop="20956" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1052" r_stop="1213" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="20023" g_stop="19879" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1214" r_stop="1358" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="19778" g_stop="19636" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1359" r_stop="1501" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1502" r_stop="1558" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.812" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1559" r_stop="1638" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1639" r_stop="1714" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1715" r_stop="1900" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1901" r_stop="1968" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1969" r_stop="2087" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="2088" r_stop="2209" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="2210" r_stop="2308" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="2309" r_stop="2788" r_length="480" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="2789" r_stop="2887" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="2888" r_stop="3130" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="3131" r_stop="3459" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="3460" polyA_stop="3483"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-U312610" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>3460</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U312610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23208" e_stop="22702"/>
          <exon e_start="22286" e_stop="22182"/>
          <exon e_start="22091" e_stop="21931"/>
          <exon e_start="21840" e_stop="21748"/>
          <exon e_start="21521" e_stop="21336"/>
          <exon e_start="21117" e_stop="20956"/>
          <exon e_start="20023" e_stop="19879"/>
          <exon e_start="19778" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAGGTACTGGGCTTTTGCAGGTTTGCAACAAAAAAGGAGAGAAAAAAGAATGCAGTGTGATGATCTCACCTTACTGATTTGTCTTGTTGGCAGGATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTGGTATGATACTTTATAGTTAGTGAATTGTGGCTAAGTCTCTTGAACTATGCAAAAAGAATGCAGTGAAGTCTATACTTCAGTTCATAAGCATTGAATTGCATATGTTGTCTCATTCATTGCTCACACTTATATGCTTAAGTTTCTTGGTTACTGTTCTCTTAAGTCTTCTCGTGAATGACTATCATACCATTTCATGGTGATTTTTTTTTTGGGAATATCATTTCAGGTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</genome_strand>
        <mrna_strand>ATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAG-AAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG..........................................................................................ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG..........................................................................................GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG..................................................................................................................................................................................................................................GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG..........................................................................................................................................................................................................................GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG....................................................................................................GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG...........................................................................................CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-wVeaik/lycopersicum_combined_unigene_seqs" ref_id="SGN-U333732" ref_strand="+" ref_description="SGN-U333732        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative, nearly identical to SP:P49608 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Cucurbita maxima}; contains Pfam profiles PF00330: Aconitase family (aconitate hydratase), PF00694: Aconitase C-terminal domain | chr2:2141396-2146675 FORWARD | Aliases: T3P4.5, T3P4_5(evalue: 2e-89, score=218) genbank/nr: gi|30407706|gb|AAP30039.1| aconitase [Lycopersicon pennellii](evalue: 7e-97, score=233)">
      <seq>gacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtctatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatattcgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatgcgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttttaaggctggggaggatgcagatacacttggattgacaggtaaagagcgctataccattgatcttcctgaaaatattaatgagatccgccctgggcaagacgttactgttcaaacagatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-Otyy8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17368" stop="15990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17068" g_stop="16811" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="358" r_length="100" r_score="0.949"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16407" i_length="182">
            <donor d_prob="0.908" d_score="0.92"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16406" g_stop="16290" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="475" r_length="117" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-U333732" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U333732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17068" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16406" e_stop="16290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGT-TGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACT</genome_strand>
        <mrna_strand>GACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCTATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATTCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATGCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTTTAAG......................................................................................................................................................................................GCTGGGGAGGATGCAGATACACTTGGATTGACAGGTAAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAATGAGATCCGCCCTGGGCAAGACGTTACTGTTCAAACAGATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-wVeaik/lycopersicum_combined_unigene_seqs" ref_id="SGN-U333741" ref_strand="+" ref_description="SGN-U333741        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative, nearly identical to SP:P49608 Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase) {Cucurbita maxima}; contains Pfam profiles PF00330: Aconitase family (aconitate hydratase), PF00694: Aconitase C-terminal domain | chr2:2141396-2146675 FORWARD | Aliases: T3P4.5, T3P4_5(evalue: 1e-60, score=229) genbank/nr: gi|29027432|gb|AAO62410.1| aconitase [Lycopersicon pennellii](evalue: 1e-68, score=262)">
      <seq>tgactggcatgcttgcctagataacaaatttggatgggagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcatagctcaaacatggcaatgctgtgattgctgctatcacaagttgcacatatacatccaatcccagtgttatgctaggatcagctctggttgccaaaaaagcatttgagctgggtgtacatgttaagccatgggttaaaactagcctttccccatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-Otyy8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19494" stop="18404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19194" g_stop="19155" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="0.90"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="226" r_length="186" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18740" g_stop="18704" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="263" r_length="37" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-U333741" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>263</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U333741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19194" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCT</genome_strand>
        <mrna_strand>TGACTGGCATGCTTGCCTAGATAACAAATTTGGATGGGAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCATAGCTCAAACATGGCAATGCTGTGATTGCTGCTATCACAAGTTGCACATATACATCCAATCCCAGTGTTATGCTAGGATCAGCTCTGGTTGCCAAAAAAGCATTTGAGCTGGGTGTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTTCCCCATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>4</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="883" PGL_stop="1551"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="883" e_stop="1063"/>
            <exon e_start="1166" e_stop="1551"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.934"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="883" e_stop="1063" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="0.912">
            <gDNA_exon_boundary e_start="1166" e_stop="1551" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="883" stop="1063"/>
              <exon start="1166" stop="1551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334498" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG : GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAA</gDNA_template>
            <first_frame> T  F  A  K  D  F  A  R  R  G  M  L  A  Y  V  E  K  I  Q  R  E  E  R  S  N  G  V  D  T  L  A  H  Q  K  W  S  G  A  N  Y  Y  D  R  V  L  R  T  V  Q  G  G  I  T  S  T  A  A  M  G  K   : G  V  T  E  E  Q  F  E  E  K  W  T  R  T  G  A  T  N  L  G  D  G  S  V  V  I  A  K  A  R  M  *  E  N  Q  Q  Q  Q  T  K  K  K  V  I  S  F  G  V  *  R  F  V  E  L  W  N  Y  L  N  F  *  V  V  N  F  K  Y  N  K  R  C  F  L  S  I  L  N  N  S  S  G  I  *  I  I  L  G  I  I  L  T  F  K  L  P  T  S  V  I  I  C  I  F  I  Y  I  W  T  S  K  L  C  *  S  F  Q  L  L  I  N  G  I  F  F  D  A  F  S  Q </first_frame>
            <second_frame>  R  L  P  R  I  S  P  G  G  E  C  W  P  M  W  R  K  Y  K  E  R  R  G  A  M  V  L  I  H  W  L  I  R  N  G  L  G  L  I  T  M  I  E  F  *  G  L  S  R  E  A  S  L  Q  L  L  L  W  E  K  :  V  *  L  R  S  N  L  R  K  N  G  Q  G  L  G  Q  Q  T  *  V  M  E  V  W  *  L  Q  R  Q  G  C  K  K  I  N  N  N  K  Q  K  K  K  *  F  L  L  E  C  E  D  L  W  S  F  G  T  I  S  I  F  R  L  *  T  S  S  T  I  K  D  V  F  *  A  F  *  I  I  L  Q  G  F  E  S  F  W  A  L  F  *  P  S  N  C  L  L  V  *  S  F  V  S  L  S  I  F  G  L  P  S  C  A  K  V  F  S  C  L  L  M  E  Y  F  L  M  L  F  H   </second_frame>
            <third_frame>   V  C  Q  G  F  R  Q  E  G  N  V  G  L  C  G  E  N  T  K  R  G  E  E  Q  W  C  *  Y  I  G  S  S  E  M  V  W  G  *  L  L  *  *  S  S  K  D  C  P  G  R  H  H  F  N  C  C  Y  G  K  R :   C  N  *  G  A  I  *  G  K  M  D  K  D  W  G  N  K  L  R  *  W  K  C  G  D  C  K  G  K  D  V  R  K  S  T  T  T  N  K  K  K  S  D  F  F  W  S  V  K  I  C  G  A  L  E  L  S  Q  F  L  G  C  E  L  Q  V  Q  *  K  M  F  F  K  H  F  K  *  F  F  R  D  L  N  H  F  G  H  Y  F  D  L  Q  I  A  Y  *  C  D  H  L  Y  L  Y  L  Y  L  D  F  Q  V  V  L  K  F  S  V  A  Y  *  W  N  I  F  *  C  F  F  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="883" stop="1063"/>
                    <exon start="1166" stop="1260"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TFAKDFARRGMLAYVEKIQREERSNGVDTLAHQKWSGANYYDRVLRTVQGGITSTAAMGKGVTEEQFEEKWTRTGATNLGDGSVVIAKARM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="23208" PGL_stop="14855"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23208" e_stop="22702"/>
            <exon e_start="22286" e_stop="22182"/>
            <exon e_start="22091" e_stop="21931"/>
            <exon e_start="21840" e_stop="21748"/>
            <exon e_start="21521" e_stop="21336"/>
            <exon e_start="21117" e_stop="20956"/>
            <exon e_start="20023" e_stop="19879"/>
            <exon e_start="19778" e_stop="19636"/>
            <exon e_start="19545" e_stop="19489"/>
            <exon e_start="19397" e_stop="19318"/>
            <exon e_start="19230" e_stop="19155"/>
            <exon e_start="19011" e_stop="18826"/>
            <exon e_start="18740" e_stop="18673"/>
            <exon e_start="18577" e_stop="18459"/>
            <exon e_start="18348" e_stop="18227"/>
            <exon e_start="17467" e_stop="17369"/>
            <exon e_start="17290" e_stop="16811"/>
            <exon e_start="16687" e_stop="16589"/>
            <exon e_start="16493" e_stop="16251"/>
            <exon e_start="15183" e_stop="14855"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="0.998"/>
          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.008" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.812" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.392" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="23208" e_stop="22702" e_length="507"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22286" e_stop="22182" e_length="105"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.978">
            <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22091" e_stop="21931" e_length="161"/>
          </exon>
          <intron i_serial="3" don_prob="0.008" acc_prob="0.999">
            <gDNA_intron_boundary i_start="21930" i_stop="21841" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21840" e_stop="21748" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="21747" i_stop="21522" i_length="226"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21521" e_stop="21336" e_length="186"/>
          </exon>
          <intron i_serial="5" don_prob="0.967" acc_prob="0.989">
            <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21117" e_stop="20956" e_length="162"/>
          </exon>
          <intron i_serial="6" don_prob="0.957" acc_prob="0.998">
            <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="20023" e_stop="19879" e_length="145"/>
          </exon>
          <intron i_serial="7" don_prob="0.882" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="19778" e_stop="19636" e_length="143"/>
          </exon>
          <intron i_serial="8" don_prob="0.461" acc_prob="0.894">
            <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="19545" e_stop="19489" e_length="57"/>
          </exon>
          <intron i_serial="9" don_prob="0.972" acc_prob="0.812">
            <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="19397" e_stop="19318" e_length="80"/>
          </exon>
          <intron i_serial="10" don_prob="0.431" acc_prob="0.994">
            <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="19230" e_stop="19155" e_length="76"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.980">
            <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="19011" e_stop="18826" e_length="186"/>
          </exon>
          <intron i_serial="12" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="18740" e_stop="18673" e_length="68"/>
          </exon>
          <intron i_serial="13" don_prob="0.392" acc_prob="0.931">
            <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="18577" e_stop="18459" e_length="119"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="18348" e_stop="18227" e_length="122"/>
          </exon>
          <intron i_serial="15" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="17467" e_stop="17369" e_length="99"/>
          </exon>
          <intron i_serial="16" don_prob="0.998" acc_prob="0.779">
            <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="17290" e_stop="16811" e_length="480"/>
          </exon>
          <intron i_serial="17" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="16687" e_stop="16589" e_length="99"/>
          </exon>
          <intron i_serial="18" don_prob="0.908" acc_prob="0.832">
            <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="16493" e_stop="16251" e_length="243"/>
          </exon>
          <intron i_serial="19" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="15183" e_stop="14855" e_length="329"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="22702"/>
              <exon start="22286" stop="22182"/>
              <exon start="22091" stop="21931"/>
              <exon start="21840" stop="21748"/>
              <exon start="21521" stop="21336"/>
              <exon start="21117" stop="20956"/>
              <exon start="20023" stop="19879"/>
              <exon start="19778" stop="19636"/>
              <exon start="19545" stop="19489"/>
              <exon start="19397" stop="19318"/>
              <exon start="19230" stop="19155"/>
              <exon start="19011" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19194" stop="19155"/>
              <exon start="19011" stop="18826"/>
              <exon start="18740" stop="18704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333741" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG : CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG : ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG : GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG : GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG : GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG : CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG : GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA : GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG : CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG : ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG : GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT : GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG : TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG : ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</gDNA_template>
            <first_frame> I  L  A  P  F  D  V  P  Q  L  R  H  C  P  L  P  Y  Q  *  S  I  I  Q  I  A  I  S  S  S  S  L  S  S  S  S  S  S  S  A  I  S  L  F  L  F  G  H  T  T  L  G  G  Y  H  *  M  *  F  E  K  K  K  N  Y  I  Y  T  Y  W  E  S  C  I  V  I  Q  L  A  S  T  L  L  L  L  L  L  H  Y  *  E  H  L  L  L  L  Q  G  R  L  L  Q  L  L  L  L  L  T  R  L  V  V  L  V  L  L  L  V  I  S  S  V  I  H  Q  R  F  G  L  C  V  A  L  C  R  G  G  V  T  V  L  I  G  S  L  R  S  V  L  L  L  R  S  G  L  L  P  L  L  S  T  G  F  I  G  N  *  L  P  W  :  L  Q  R  T  H  L  R  E  S  S  L  V  F  Q  S  P  E  V  V  N  S  E  S  S  I  A  Y  L  R  S  M  I  P  G  L  :  T  S  Y  H  T  L  S  E  F  F  S  N  Q  Q  S  V  I  V  T  T  F  K  *  K  R  K  M  L  R  R  L  L  T  G  K  I  L  H  L  S  L  W  R  Y  P  S  S  L  P  V  S  C  C  R :   I  L  L  V  Y  Q  L  W  W  T  L  L  A  C  V  M  P  *  T  T  L  A  V  I  L  T  R  L  I  H  W :   F  L  S  T  *  L  L  I  T  Q  F  K  L  M  *  Q  G  Q  K  M  Q  S  R  L  I  W  S  L  N  S  K  G  I  R  R  D  L  P  S  L  S  G  D  P  M  L  S  K  T  C  L  L  F  H  L  G  L  V  L  C  I  R :   *  I  L  N  I  L  E  G  L  C  S  I  G  K  A  C  S  T  Q  I  A  W  S  E  Q  I  P  T  P  L  *  L  M  G  *  E  L  L  A  G  V  S  E  V  L  R  Q  K  L  Q  C  L  A  S :   Q  *  A  W  C  C  L  E  L  S  G  S  S  Y  Q  G  I  C  E  M  V  *  L  P  L  T  W  F  *  L  S  L  K  C  *  G  S  M  V  L  L  E  S  L  L  N  S  M  :  V  R  E  *  V  V  F  H  W  L  T  G  P  P  L  Q  T  W  L  L  N  M  V  Q  Q  W  V  S  S  L  *  I  M  L  L  C  N  T  S  S  *  Q  G  E  V  M  K  Q :   L  E  W  *  S  H  I  S  V  Q  I  I  C  L  S  I  I  K  S :   L  N  K  K  R  C  T  L  L  I  *  T  *  T  L  P  M  L  N  H  V  C  Q  G  Q  R   : D  L  M  T  V  C  L  *  K  K  *  S  L  T  G  M  L  A  *  I  T  K  L  D  S  R :   D  L  L  C  Q  K  R  C  K  I  K  W  P  S  F  P  S  M  G  N  L  Q  S  S  N  M  A  V  L  *  L  L  L  S  Q  V  A  Q  I  H  P  I  P  V  L  C  *  E  Q  L  W  L  P  K  R  H  L  S  W  V  Y  M :   L  S  H  G  L  K  L  A  L  P  Q  A  L  V  L  L  Q  N  I  Y  S  R   : V  V  Y  R  S  I  *  I  S  K  V  S  T  L  L  A  M  A  A  P  L  V  *  G  T  L  G  T  W  M  N  L  L  L  L  P  Y  Q  R  T  :  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   E  L  K  L  *  L  L  R  A  S  R  G  F  I  A  V  T  W  *  E  W  V  L  C  L  Y  V  L  R  L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F  </first_frame>
            <second_frame>  F  *  L  H  L  M  C  R  S  F  G  T  V  L  Y  H  I  S  N  Q  *  F  K  S  P  Y  L  L  R  H  Y  L  H  L  L  P  H  Q  Q  F  P  F  F  C  L  G  T  Q  P  *  E  V  T  I  E  C  D  L  R  K  K  K  T  I  Y  I  H  I  G  S  H  V  *  *  Y  S  S  Q  V  L  F  F  C  C  F  F  I  I  E  S  I  F  F  C  Y  K  A  A  C  F  N  F  Y  C  C  S  R  A  L  S  C  W  C  C  F  W  *  S  A  A  L  F  I  N  A  S  V  S  A  L  L  C  A  E  V  E  S  R  C  *  L  E  V  S  D  Q  S  Y  C  S  D  Q  D  C  C  P  C  S  Q  R  V  S  S  E  T  S  Y  H  G :   C  R  E  P  I  *  G  N  P  H  W  S  S  K  A  R  R  W  *  I  R  K  V  L  *  L  T  C  A  Q  *  S  Q  D  * :   Q  A  T  I  L  Y  Q  N  S  S  R  I  S  N  P  *  L  *  Q  L  S  S  E  K  G  R  C  *  E  D  Y  *  L  G  K  F  C  T  *  A  C  G  D  T  L  Q  A  C  P  C  L  A  A   : G  F  Y  W  C  T  S  C  G  G  P  C  L  H  A  *  C  H  E  Q  P  W  Q  *  F  *  Q  D  *  S  I   : G  S  C  R  P  S  Y  *  S  L  S  S  S  *  C  N  K  V  R  K  C  S  P  G  *  Y  G  A  *  I  P  K  E  *  G  E  I  C  L  P  *  V  G  I  Q  C  F  P  K  H  A  C  C  S  T  W  V  W  Y  C  A  S   : G  E  S  *  I  S  W  K  G  C  V  Q  *  G  R  L  A  L  P  R  *  R  G  R  N  R  F  P  H  H  Y  D  *  W  V  R  S  C  W  L  G  C  R  R  Y  *  G  R  S  C  N  A  W  P   : A  N  E  H  G  V  A  W  S  C  R  V  Q  A  I  R  E  F  A  K  W  C  N  C  H  *  L  G  S  D  C  H  S  N  A  E  E  A  W  C  C  W  K  V  C  *  I  L  W :   *  G  N  E  W  S  F  I  G  *  Q  G  H  H  C  K  H  G  S  *  I  W  C  N  N  G  F  L  P  C  R  S  C  Y  F  A  I  P  Q  V  N  R  E  K  *  *  N   : S  W  N  G  R  V  I  S  P  C  K  *  Y  V  C  R  L  *  R   : A  S  T  R  K  G  V  L  F  L  F  E  L  R  P  C  R  C  *  T  M  S  V  R  A  K  E  :  T  S  *  P  C  A  F  E  R  N  E  V  *  L  A  C  L  P  R  *  Q  S  W  I  Q   : G  I  C  C  A  K  R  G  A  R  *  S  G  Q  V  F  L  P  W  A  T  C  R  A  Q  T  W  Q  C  C  D  C  C  Y  H  K  L  H  K  Y  I  Q  S  Q  C  Y  A  R  S  S  S  G  C  Q  K  G  I  *  A  G  S  T   : C  *  A  M  G  *  N  *  P  C  P  R  L  W  C  C  Y  K  I  F  T  Q  E  :  W  S  T  E  V  F  K  S  A  R  F  Q  H  C  W  L  W  L  H  H  L  Y  R  E  L  W  G  L  G  *  I  C  C  F  C  H  I  R  E  R :   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  S  *  S  C  N  C  *  E  L  R  E  D  S  S  Q  *  L  G  R  N  G  Y  C  A  S  M  F  *  G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S </second_frame>
            <third_frame>   F  S  S  I  *  C  A  A  A  S  A  L  S  F  T  I  S  V  I  N  N  S  N  R  H  I  F  F  V  T  I  F  I  F  F  L  I  S  N  F  P  F  F  V  W  A  H  N  P  R  R  L  P  L  N  V  I  *  E  K  K  K  L  Y  I  Y  I  L  G  V  M  Y  S  N  T  A  R  K  Y  S  S  S  A  A  S  S  L  L  R  A  S  S  S  V  T  R  P  L  A  S  T  S  T  A  A  H  A  P  C  R  A  G  A  A  S  G  N  Q  Q  R  Y  S  S  T  L  R  S  L  R  C  S  V  P  R  W  S  H  G  V  D  W  K  S  P  I  S  L  T  A  Q  I  R  T  A  A  P  A  L  N  G  F  H  R  K  L  A  T  M   : A  A  E  N  P  F  K  G  I  L  T  G  L  P  K  P  G  G  G  E  F  G  K  F  Y  S  L  P  A  L  N  D  P  R  I   : D  K  L  P  Y  S  I  R  I  L  L  E  S  A  I  R  N  C  D  N  F  Q  V  K  K  E  D  V  E  K  I  I  D  W  E  N  S  A  P  K  L  V  E  I  P  F  K  P  A  R  V  L  L  Q  :  D  F  T  G  V  P  A  V  V  D  L  A  C  M  R  D  A  M  N  N  L  G  S  D  S  D  K  I  N  P  L  :  V  P  V  D  L  V  I  D  H  S  V  Q  V  D  V  T  R  S  E  N  A  V  Q  A  N  M  E  L  E  F  Q  R  N  K  E  R  F  A  F  L  K  W  G  S  N  A  F  Q  N  M  L  V  V  P  P  G  S  G  I  V  H  Q  :  V  N  L  E  Y  L  G  R  V  V  F  N  R  E  G  L  L  Y  P  D  S  V  V  G  T  D  S  H  T  T  M  I  D  G  L  G  V  A  G  W  G  V  G  G  I  E  A  E  A  A  M  L  G  Q  :  P  M  S  M  V  L  P  G  V  V  G  F  K  L  S  G  N  L  R  N  G  V  T  A  T  D  L  V  L  T  V  T  Q  M  L  R  K  H  G  V  V  G  K  F  V  E  F  Y   : G  E  G  M  S  G  L  S  L  A  D  R  A  T  I  A  N  M  A  P  E  Y  G  A  T  M  G  F  F  P  V  D  H  V  T  L  Q  Y  L  K  L  T  G  R  S  D  E  T  :  V  G  M  V  E  S  Y  L  R  A  N  N  M  F  V  D  Y  K  E  :  P  Q  Q  E  K  V  Y  S  S  Y  L  N  L  D  L  A  D  V  E  P  C  L  S  G  P  K  R :   P  H  D  R  V  P  L  K  E  M  K  S  D  W  H  A  C  L  D  N  K  V  G  F  K  :  G  F  A  V  P  K  E  V  Q  D  K  V  A  K  F  S  F  H  G  Q  P  A  E  L  K  H  G  S  V  V  I  A  A  I  T  S  C  T  N  T  S  N  P  S  V  M  L  G  A  A  L  V  A  K  K  A  S  E  L  G  L  H  :  V  K  P  W  V  K  T  S  L  A  P  G  S  G  V  V  T  K  Y  L  L  K  S :   G  L  Q  K  Y  L  N  Q  Q  G  F  N  I  V  G  Y  G  C  T  T  C  I  G  N  S  G  D  L  D  E  S  V  A  S  A  I  S  E  N   : D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  G  V  K  A  V  I  A  K  S  F  E  R  I  H  R  S  N  L  V  G  M  G  I  V  P  L  C  F  K  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23032" stop="22702"/>
                    <exon start="22286" stop="22182"/>
                    <exon start="22091" stop="21931"/>
                    <exon start="21840" stop="21748"/>
                    <exon start="21521" stop="21336"/>
                    <exon start="21117" stop="20956"/>
                    <exon start="20023" stop="19879"/>
                    <exon start="19778" stop="19636"/>
                    <exon start="19545" stop="19489"/>
                    <exon start="19397" stop="19318"/>
                    <exon start="19230" stop="19155"/>
                    <exon start="19011" stop="18826"/>
                    <exon start="18740" stop="18673"/>
                    <exon start="18577" stop="18459"/>
                    <exon start="18348" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16493" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>3021</number_coding_nucleotides>
                  <number_encoded_amino_acids>1007</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKKLYIYILGVMYSNTARKYSSSAASSLLRASSSVTRPLASTSTAAHAPCRAGAASGNQQRYSSTLRSLRCSVPRWSHGVDWKSPISLTAQIRTAAPALNGFHRKLATMAAENPFKGILTGLPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKLVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGSDSDKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNREGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGNLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSGLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVGMVESYLRANNMFVDYKEPQQEKVYSSYLNLDLADVEPCLSGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAVPKEVQDKVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="17068" e_stop="16811"/>
            <exon e_start="16687" e_stop="16589"/>
            <exon e_start="16406" e_stop="16290"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="0.992"/>
          <exon-intron don_prob="0.908" acc_prob="0.914" e_score="0.949"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="17068" e_stop="16811" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123"/>
          </intron>
          <exon e_serial="2" e_score="0.949">
            <gDNA_exon_boundary e_start="16687" e_stop="16589" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.914">
            <gDNA_intron_boundary i_start="16588" i_stop="16407" i_length="182"/>
          </intron>
          <exon e_serial="3" e_score="0.974">
            <gDNA_exon_boundary e_start="16406" e_stop="16290" e_length="117"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17068" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16406" stop="16290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333732" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACT</gDNA_template>
            <first_frame> D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T </first_frame>
            <second_frame>  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I   </second_frame>
            <third_frame>   Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17068" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16406" stop="16290"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>474</number_coding_nucleotides>
                  <number_encoded_amino_acids>158</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 9 chains have been computed
$ 
$ memory statistics:
$ 8992 bytes spliced alignments in total
$ 4 spliced alignments have been stored
$ 2248 bytes was the average size of a spliced alignment
$ 7496 bytes predicted gene locations in total
$ 2 predicted gene locations have been stored
$ 3748 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 10 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-26 23:31:00
-->
