<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-02-20 09:01:30"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E406637" ref_strand="+" ref_description="SGN-E406637 [PPI-4-O20]">
      <seq>ctgatggtgacactggatttggtggtgcaactgctactgttaagctgtgtaagcttttcgtggagcgcggtgctgctggtgtccacattgaggatcagtcctctgttactaagaaatgtggtcatatggctggcaaagttcttgttgctgtaagtgaacatattaacaggcttgtggctgcaaggttgcagtttgatatcatggggactgaaacggtcctcgtggctcgtactgatgcggttgcagccacattgatccaaaccaatgtggatacaagggatcaccagttcattttgggtgtttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacaggaccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgattcaatcaagaaaatgaacctcgcagagcacgagaagcagaggaggttgaaccagtggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggttgttgaaagacttggccttcctaatctcttttgggactgggacttgccaagaaccagagaagggttctacaggtttcagggatcagtnagagctgcaattgttcgcggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1" g_stop="619" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="669" r_length="619" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E406637" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E406637" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1" e_stop="619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCTCTGTTACTAAGAAATGTGGTCATATGGCTGGTAAAGTTCTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGAT</genome_strand>
        <mrna_strand>AAGCTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCTCTGTTACTAAGAAATGTGGTCATATGGCTGGCAAAGTTCTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATATCATGGGGACTGAAACGGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCACCAGTTCATTTTGGGTGTTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGACCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATTCAATCAAGAAAATGAACCTCGCAGAGCACGAGAAGCAGAGGAGGTTGAACCAGTGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTTGTTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCAAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGATCAGTNAGAGCTGCAATTGTTCGCGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E267947" ref_strand="+" ref_description="SGN-E267947 [cLEI-12-N20]">
      <seq>taaagttcttgttgctgtaagtgaacatattaacaggcttgtggctgcaaggttgcagtttgatgtcatggggactgagacagtcctcgtggctcgtactgatgcggttgcagccacattgatccaaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84" g_stop="552" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E267947" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84" e_stop="552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGTTCTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGAC</genome_strand>
        <mrna_strand>TAAAGTTCTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E343997" ref_strand="+" ref_description="SGN-E343997 [cTOF-12-K8]">
      <seq>atattaacaggcttgtggctgcaaggttgcagtttgatgtcatggggactgagacagtcctcgtggctcgtactgatgcggttgcagccacattgatccaaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcaaggatgaatgataaccaaatgatgggatttcattccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110" g_stop="808" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E343997" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110" e_stop="808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGAT-GGATTTCATTCCAA</genome_strand>
        <mrna_strand>ATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAAGGATGAATGATAACCAAATGATGGGATTTCATTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E267763" ref_strand="+" ref_description="SGN-E267763 [cLEI-12-P7]">
      <seq>aaggttgcagtttgatgtcatggggactgagacagtcctcgtggctcgtactgatgcggttgcagccacattgatccaaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtnctgatatgggggaatgcacaaaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132" g_stop="693" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E267763" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132" e_stop="693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTT</genome_strand>
        <mrna_strand>AAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTNCTGATATGGGGGAATGCACAAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E241295" ref_strand="+" ref_description="SGN-E241295 [cLED-26-P11]">
      <seq>tggctcgtactgatgcggttgcagccacattgatccaaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="173" g_stop="552" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E241295" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241295" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="173" e_stop="552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGAC</genome_strand>
        <mrna_strand>TGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E269242" ref_strand="+" ref_description="SGN-E269242 [cLEI-16-L22]">
      <seq>tgatgcggttgcagccacattgatccaaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="183" g_stop="685" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="503" r_length="503" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E269242" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="183" e_stop="685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCA</genome_strand>
        <mrna_strand>TGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E264940" ref_strand="+" ref_description="SGN-E264940 [cLEI-10-F5]">
      <seq>ccacattgatccaaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcanggatgaatgataaccaaatgatggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="197" g_stop="799" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E264940" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="197" e_stop="799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATT</genome_strand>
        <mrna_strand>CCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCANGGATGAATGATAACCAAATGATGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266103" ref_strand="+" ref_description="SGN-E266103 [cLEI-6-F5]">
      <seq>caaaccaatgtggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="208" g_stop="696" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266103" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="208" e_stop="696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCT</genome_strand>
        <mrna_strand>CAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E377950" ref_strand="+" ref_description="SGN-E377950 [TUS-20-B18]">
      <seq>tggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaatacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="218" g_stop="939" g_length="722"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E377950" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="218" e_stop="939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAA</genome_strand>
        <mrna_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAG-AAATACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E242575" ref_strand="+" ref_description="SGN-E242575 [cLED-30-N23]">
      <seq>tggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggcggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="218" g_stop="878" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E242575" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="218" e_stop="878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGT</genome_strand>
        <mrna_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGCGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E232780" ref_strand="+" ref_description="SGN-E232780 [cLED-8-B14]">
      <seq>tggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcanggatgaatgatnaccaaatgatggatttcattccaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="218" g_stop="811" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E232780" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="218" e_stop="811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAA</genome_strand>
        <mrna_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCANGGATGAATGATNACCAAATGATGGATTTCATTCCAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E232942" ref_strand="+" ref_description="SGN-E232942 [cLED-6-G13]">
      <seq>tggatacaagggatcatcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="218" g_stop="644" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="427" r_length="427" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E232942" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="218" e_stop="644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCT</genome_strand>
        <mrna_strand>TGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E241160" ref_strand="+" ref_description="SGN-E241160 [cLED-26-P23]">
      <seq>atacaagggatcatcaattcattttgggtgcttccaacccgaatcttaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaactttaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="221" g_stop="493" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E241160" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="221" e_stop="493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACG</genome_strand>
        <mrna_strand>ATACAAGGGATCATCAATTCATTTTGGGTGCTTCCAACCCGAATCTTAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTTAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E344205" ref_strand="+" ref_description="SGN-E344205 [cTOF-16-N9]">
      <seq>atcagttcattttgggtgcttccaacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="233" g_stop="880" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="648" r_length="648" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E344205" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="233" e_stop="880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCG</genome_strand>
        <mrna_strand>ATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E267110" ref_strand="+" ref_description="SGN-E267110 [cLEI-4-L17]">
      <seq>caacccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="255" g_stop="674" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E267110" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="255" e_stop="674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATAT</genome_strand>
        <mrna_strand>CAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E267807" ref_strand="+" ref_description="SGN-E267807 [cLEI-12-A21]">
      <seq>ccgaatctcaagggcaagggtttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="259" g_stop="795" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="537" r_length="537" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E267807" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="259" e_stop="795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATG</genome_strand>
        <mrna_strand>CCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E233653" ref_strand="+" ref_description="SGN-E233653 [cLED-14-E20]">
      <seq>ttggctactcttttgtctgaagctatggctgcaggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="280" g_stop="869" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E233653" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="280" e_stop="869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGC</genome_strand>
        <mrna_strand>TTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E241519" ref_strand="+" ref_description="SGN-E241519 [cLED-28-B20]">
      <seq>ttggctactcttttgtctgaagctatggctgcgggcaaaacagggccggaacttcaagccattgaggataactggcttggaatggctgaactcaagacattttctcaatgtgtcactgatgcaatcaagaaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcacggagttaagactctaaggcctgagctgatgctggcttacaatctgtctncctcattcaattgggatgcatcaaggatgaatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="1" stop="1083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="280" g_stop="783" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E241519" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="280" e_stop="783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGAT</genome_strand>
        <mrna_strand>TTGGCTACTCTTTTGTCTGAAGCTATGGCTGCGGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCACGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTNCCTCATTCAATTGGGATGCATCAAGGATGAATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266585" ref_strand="+" ref_description="SGN-E266585 [cLEI-5-J14]">
      <seq>aaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="109" stop="1291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="409" g_stop="991" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="583" r_length="583" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266585" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266585" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="409" e_stop="991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTG</genome_strand>
        <mrna_strand>AAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266587" ref_strand="+" ref_description="SGN-E266587 [cLEI-5-J18]">
      <seq>aaaatgaacctcgcggagtatgagaagcagatgaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="109" stop="1192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="409" g_stop="892" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266587" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="409" e_stop="892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCA</genome_strand>
        <mrna_strand>AAAATGAACCTCGCGGAGTATGAGAAGCAGATGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E295418" ref_strand="+" ref_description="SGN-E295418 [cLET-23-P11]">
      <seq>aaaatgaacctcgcggagtatgagaagcagaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgttggcttacaatctgtctccctcattcaattgggatgcatcanggatgaatgataaccaaatgatggatttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="109" stop="1103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="409" g_stop="803" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E295418" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="409" e_stop="803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCAT</genome_strand>
        <mrna_strand>AAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGTTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCANGGATGAATGATAACCAAATGATGGATTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E238549" ref_strand="+" ref_description="SGN-E238549 [cLED-17-B17]">
      <seq>gaggaagttgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="138" stop="1361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="438" g_stop="1061" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="624" r_length="624" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E238549" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="438" e_stop="1061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAA</genome_strand>
        <mrna_strand>GAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E242615" ref_strand="+" ref_description="SGN-E242615 [cLED-30-A5]">
      <seq>gaggaagatgaacgaatggatgaatcattcgagctatgagaaatgtctttcgcacgaacaagctagggaggtagctgaaagacttggccttcctaatctgttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcaacagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctaatctggatggagacatcaagtcctgatatggtggaatgcacacaattttctcaaggagacaagactctaaggcctgagctgatgctggcttacaatctggctccctcattcaattgggatgcattatggatgaatgataaccaaatgatggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="138" stop="1098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="438" g_stop="798" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E242615" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="438" e_stop="798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGAT</genome_strand>
        <mrna_strand>GAGGAAGATGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTGTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAACAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAATCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACACAATTTTCTCAAGGAGACAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGGCTCCCTCATTCAATTGGGATGCATTATGGATGAATGATAACCAAATGATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265311" ref_strand="+" ref_description="SGN-E265311 [cLEI-9-D9]">
      <seq>aacaagctagggaggtagctgaaagacttggccttcctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaagcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="194" stop="1310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="494" g_stop="1010" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E265311" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="494" e_stop="1010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAG</genome_strand>
        <mrna_strand>AACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAAGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E280158" ref_strand="+" ref_description="SGN-E280158 [cLEL-7-E22]">
      <seq>gcacgagggtagctgaaagacttggccttcctaatctcttttgggactgggattgcctagaaccagagacgggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattacgctattgctggcagttcattactttagctggtttccatgctgatgcactcatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="205" stop="1177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="499" g_stop="877" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E280158" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="499" e_stop="877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCG</genome_strand>
        <mrna_strand>GCACGAG-GGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGA-TTGCCTAGAACCAGAGACGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTACGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265367" ref_strand="+" ref_description="SGN-E265367 [cLEI-9-C3]">
      <seq>ctagggaggtagctgaaagacttggccttcctaatgtgttttgggactgggactggcctagaaccagagaagggttctacaggtttcagggctcagtagaagctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcaaggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaagctattgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="200" stop="1133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="500" g_stop="833" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E265367" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="500" e_stop="833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTG</genome_strand>
        <mrna_strand>CTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATGTGTTTTGGGACTGGGACTGGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAAGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAAGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAAGCTATTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E235288" ref_strand="+" ref_description="SGN-E235288 [cLED-11-O11]">
      <seq>cctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="229" stop="1505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="529" g_stop="1063" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1205" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="575" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E235288" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="529" e_stop="1063"/>
          <exon e_start="1166" e_stop="1205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGAC</genome_strand>
        <mrna_strand>CCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E228327" ref_strand="+" ref_description="SGN-E228327 [cLED-3-G9]">
      <seq>cctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="229" stop="1359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="529" g_stop="1059" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E228327" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="529" e_stop="1059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGA</genome_strand>
        <mrna_strand>CCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E241998" ref_strand="+" ref_description="SGN-E241998 [cLED-27-G22]">
      <seq>cctaatctcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="229" stop="1316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="529" g_stop="1016" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E241998" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="529" e_stop="1016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCT</genome_strand>
        <mrna_strand>CCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E236299" ref_strand="+" ref_description="SGN-E236299 [cLED-20-D15]">
      <seq>tcttttgggactgggacttgcctagaaccagagaagggttctacaggtttcagggctcagtagaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="236" stop="1190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="536" g_stop="890" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E236299" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="536" e_stop="890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGC</genome_strand>
        <mrna_strand>TCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E476440" ref_strand="+" ref_description="SGN-E476440 [cSTB-44-F18]">
      <seq>aagggttctacaggtttcagggatcagtagaggctgcaattgttcgcggatgggctttcgccgaatactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctgaaggagttaagtctctaaggcctgagctgatgttggcttacaatctgtctccgtcattcaattgggatgcatcaggaatgaatgataaccaaatgatggatttcattccaagaatagccaagttaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="269" stop="1191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="569" g_stop="891" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E476440" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="569" e_stop="891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCC</genome_strand>
        <mrna_strand>AAGGGTTCTACAGGTTTCAGGGATCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTCGCCGAATACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTGAAGGAGTTAAGTCTCTAAGGCCTGAGCTGATGTTGGCTTACAATCTGTCTCCGTCATTCAATTGGGATGCATCAGGAATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAGTTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E232840" ref_strand="+" ref_description="SGN-E232840 [cLED-8-I23]">
      <seq>agaggctgcaattgttcgcggatgggcttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="297" stop="1316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="597" g_stop="1016" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E232840" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="597" e_stop="1016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCT</genome_strand>
        <mrna_strand>AGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E238618" ref_strand="+" ref_description="SGN-E238618 [cLED-17-N8]">
      <seq>ttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="324" stop="1323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="624" g_stop="1023" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E238618" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="624" e_stop="1023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACT</genome_strand>
        <mrna_strand>TTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E233746" ref_strand="+" ref_description="SGN-E233746 [cLED-14-M13]">
      <seq>ttttgccgagtactgtgatctagtctggatggagacatcaagtcctgatatggtggaatgcacaaaattttctcaaggagttaagactctaaggcctgagctgatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="324" stop="1316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="624" g_stop="1016" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E233746" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="624" e_stop="1016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCT</genome_strand>
        <mrna_strand>TTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E284721" ref_strand="+" ref_description="SGN-E284721 [cLES-3-L10]">
      <seq>gatgctggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="426" stop="1539"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="726" g_stop="1063" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1239" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="412" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E284721" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="726" e_stop="1063"/>
          <exon e_start="1166" e_stop="1239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTG</genome_strand>
        <mrna_strand>GATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E342497" ref_strand="+" ref_description="SGN-E342497 [cTOF-8-L21]">
      <seq>tggcttacaatctgtctccctcattcaattgggatgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgctacctagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaaagttttcagttgcttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="431" stop="1823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="731" g_stop="1063" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1518" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="687" r_length="354" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="688" polyA_stop="704"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E342497" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="731" e_stop="1063"/>
          <exon e_start="1166" e_stop="1518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCT-AAAGTTTTCAGTTGCTT</genome_strand>
        <mrna_strand>TGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCTACCTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAAGTTTTCAGTTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265792" ref_strand="-" ref_description="SGN-E265792 [cLEI-11-N22]">
      <seq>atgcatcagggatgaatgataaccaaatgatggatttcattccaagaatagccaaattaggctattgctggcagttcattactttagctggtttccatgctgatgcactcatcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatccaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagataatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaaaaaaaaaaaaaaaaaactcagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="464" stop="1714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="764" g_stop="1063" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1413" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="548" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1414" i_stop="1709" i_length="296">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.834" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1710" g_stop="1714" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="553" r_length="5" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="554" polyA_stop="566"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E265792" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265792" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="764" e_stop="1063"/>
          <exon e_start="1166" e_stop="1413"/>
          <exon e_start="1710" e_stop="1714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAACTTATTATTCAAATTATAAAATTCTGGCAACTAAATACATTATTAAGATACAATTTCACAAGAAAAATGAAGATACGTAGAAGAAAGTTTGAAGGATTAACAGCAAGTAATGTGTATTCTGAGTTAACTAATTTACTTCTTCCAAGGTTTGATCACAGATAGA</genome_strand>
        <mrna_strand>ATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATCCAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGATAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGA........................................................................................................................................................................................................................................................................................................AAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266551" ref_strand="-" ref_description="SGN-E266551 [cLEI-5-J5]">
      <seq>catcgtcgacacgtttgccaaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaagttttcagttgcttattaatggaatattttttgatgctttttcacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="573" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="873" g_stop="1063" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1553" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="579" r_length="388" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266551" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266551" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="873" e_stop="1063"/>
          <exon e_start="1166" e_stop="1553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAACT</genome_strand>
        <mrna_strand>CATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E377949" ref_strand="-" ref_description="SGN-E377949 [TUS-20-B18]">
      <seq>acgtttgccaaggatttcgccaggaggggaatgttggcctatgtggaaaaaatacaaaaaaaggaaaggagcaatggggttgatacattgggtcatcaaaaatggtttgggggtaattactatgataaagttttaaggactgtccagggaggcatcccttcaactgctgctatgggaaaaggggtaacttaggagccatttgaggaaaaatgggcaagggctggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaaaaaaatcccccccccccaacaaaaaaaaaagtgattttttttggagggtgaaaatttgtggagctttggaactatttcaatttttaggttgtgaacttcaaggacaataaaaaatgttttttaagccttttaaataatttttcagggatttgaatccttttgggccttattttgaccttcaaattgcccactagggggatcctttggatttttatttatatttggacttcccagttgtggtaaagttttcagttgcttattaatggaatattttttggtgctttttcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="583" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="883" g_stop="1063" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1551" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="567" r_length="386" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="568" polyA_stop="612"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E377949" ref_strand="-">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377949" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="883" e_stop="1063"/>
          <exon e_start="1166" e_stop="1551"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAA</genome_strand>
        <mrna_strand>ACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAAAAAATACAAAAAAAGGAAAGGAGCAATGGGGTTGATACATTGGGTCATCAAAAATGGTTTGGGGGTAATTACTATGATAAAGTTTTAAGGACTGTCCAGGGAGGCATCCCTTCAACTGCTGCTATGGGAAAAG......................................................................................................GGGTAACTTAGGAGCCATTTGAGGAAAAATGGGCAAGGGCTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAAAAAATCCCCCCCCCCCAACAAAAAAAAAAGTGATTTTTTTTGGAGGGTGAAAATTTGTGGAGCTTTGGAACTATTTCAATTTTTAGGTTGTGAACTTCAAGGACAATAAAAAATGTTTTTTAAGCCTTTTAAATAATTTTTCAGGGATTTGAATCCTTTTGGGCCTTATTTTGACCTTCAAATTGCCCACTAGGGGGATCCTTTGGATTTTTATTTATATTTGGACTTCCCAGTTGTGGTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGGTGCTTTTTCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266084" ref_strand="-" ref_description="SGN-E266084 [cLEI-6-I4]">
      <seq>caaggatttcgccaggaggggaatgttggcctatgtggagaaaatacaaagagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="591" stop="1799"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="891" g_stop="1063" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1499" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="507" r_length="334" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266084" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266084" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="891" e_stop="1063"/>
          <exon e_start="1166" e_stop="1499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTG</genome_strand>
        <mrna_strand>CAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E267928" ref_strand="-" ref_description="SGN-E267928 [cLEI-12-H24]">
      <seq>agagaggagaggagcaatggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggccaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaaaaaaaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="640" stop="1804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="940" g_stop="1063" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1504" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="463" r_length="339" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="464" polyA_stop="486"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E267928" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267928" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="940" e_stop="1063"/>
          <exon e_start="1166" e_stop="1504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAA</genome_strand>
        <mrna_strand>AGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGCCAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266338" ref_strand="-" ref_description="SGN-E266338 [cLEI-3-E7]">
      <seq>aatggtgttgatcacattggctcatcagaaatggtctgcggctaattactatgatagagttgtaaggcctgttcatgaaggcatcacttcaaatgctggtatggaaaaaggtgtatgtgagtagcgatttgagaaaaaatggtcaaggacttgggcaaccaacttaggtgatgaaagtgtggtgatagcaaagtcaagcatgtaagattatcaaccacgacggtcaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatatcaatttataggttgtgaacttcaagtacaataaaaaatgttttttaagcattttaaataatttttcagggatttgaatcattttgggcattattttgacctacaaattgccaactagtgtgatcatttgtatctttatccaaatttggacttccaaggtgtgctaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="655" stop="1804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="955" g_stop="1063" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.899"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="0.84"/>
            <acceptor a_prob="1.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1504" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="449" r_length="339" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="450" polyA_stop="462"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266338" ref_strand="-">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266338" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="955" e_stop="1063"/>
          <exon e_start="1166" e_stop="1504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGTGTTGAT-ACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAA</genome_strand>
        <mrna_strand>AATGGTGTTGATCACATTGGCTCATCAGAAATGGTCTGCGGCTAATTACTATGATAGAGTTGTAAGGCCTGTTCATGAAGGCATCACTTCAAATGCTGGTATGGAAAAAG......................................................................................................GTGTATGTGAGTAGCGATTTGAGAAAAAATGGTCAAGGACTTGGGCAACCAACTTAGGTGATGAAAGTGTGGTGATAGCAAAGTCAAGCATGTAAGATTATCAACCACGACGGTCAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATATCAATTTATAGGTTGTGAACTTCAAGTACAATAAAAAATGTTTTTTAAGCATTTTAAATAATTTTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTACAAATTGCCAACTAGTGTGATCATTTGTATCTTTATCCAAATTTGGACTTCCAAGGTGTGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266128" ref_strand="-" ref_description="SGN-E266128 [cLEI-6-N5]">
      <seq>tggtgttgatacattggctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaagttttcagttgcttattaatggaatattttttgatgctttttcacaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="657" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="957" g_stop="1063" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1558" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="499" r_length="392" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266128" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266128" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="957" e_stop="1063"/>
          <exon e_start="1166" e_stop="1558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAACTTATTA</genome_strand>
        <mrna_strand>TGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAAC-AAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266350" ref_strand="-" ref_description="SGN-E266350 [cLEI-3-I5]">
      <seq>ctcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccaggtaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgagtaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaccaccaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaagttttcagttccttattaaaaaaaaaaaaaaaaaaaaaaaactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="674" stop="1823"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="974" g_stop="1063" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1522" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="447" r_length="357" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="448" polyA_stop="471"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E266350" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266350" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="974" e_stop="1063"/>
          <exon e_start="1166" e_stop="1522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTA</genome_strand>
        <mrna_strand>CTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGTAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGTAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCACCACCAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTCCTTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E268475" ref_strand="-" ref_description="SGN-E268475 [cLEI-13-A15]">
      <seq>tcatcagaaatggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaccaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaagttttcagttgcttattaatggaatattttttgatgctttttccccaaaaaaaaacaaaaaaaaaaaaaaaaaaaacgcgagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="675" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="975" g_stop="1063" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1547" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="471" r_length="382" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="475" polyA_stop="504"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E268475" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268475" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="975" e_stop="1063"/>
          <exon e_start="1166" e_stop="1547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTC</genome_strand>
        <mrna_strand>TCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACACCAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E237360" ref_strand="-" ref_description="SGN-E237360 [cLEL-7-D3]">
      <seq>tggtctggggctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggcaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaagttttcagttgcttattaatggaatattttttgatgctttttcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="685" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="985" g_stop="1063" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1565" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="479" r_length="400" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E237360" ref_strand="-">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237360" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="985" e_stop="1063"/>
          <exon e_start="1166" e_stop="1565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAACTTATTATTCAAAT</genome_strand>
        <mrna_strand>TGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E236897" ref_strand="-" ref_description="SGN-E236897 [cLEL-7-D3]">
      <seq>ctaattactatgatagagttctaaggactgtccagggaggcatcacttcaactgctgctatgggaaaaggtgtaactgaggagcaatttgaggaaaaatggacaaggactggggccaacaaacttaggtgatggaagtgtggtgattgcaaaggcaaggatgtaagaaaatcaacaacaacaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatctcaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattattttgaccttcaaattgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaagttttcagttgcttattaatggaatattttttgatgctttttcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="695" stop="1851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="995" g_stop="1063" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1565" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="470" r_length="401" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E236897" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236897" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="995" e_stop="1063"/>
          <exon e_start="1166" e_stop="1565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGG-CAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAACTTATTATTCAAAT</genome_strand>
        <mrna_strand>CTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E229479" ref_strand="-" ref_description="SGN-E229479 [cLEL-4-H8]">
      <seq>ctgctgctatgggaaaaggtgtaactaaggagcaatttgaggaaaaatggacaaggtctggggcaacaaactttaggtatggaagtgtggtgattgcaaaggcaaggatgtaagaaaattcanncaccaccaaacaaaaaaaaaagtgatttcttttggagtgtgaagatttgtggagctttggaactatcccaatttttaggttgtgaacttcaagtacaataaaagatgttttttaagcattttaaataattcttcagggatttgaatcattttgggcattatttttaccctcaaatttgcctactagtgtgatcatttgtatctttatctatatttggacttccaagttgtgctaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="746" stop="1804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1046" g_stop="1063" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1166" g_stop="1504" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="360" r_length="342" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="361" polyA_stop="383"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E229479" ref_strand="-">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229479" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="1046" e_stop="1063"/>
          <exon e_start="1166" e_stop="1504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCTGCTATGGGAAAAGGTATTTAAGTTTTACGCGTTTTTTACATGTCAGTGTATAAAACTTAAACTTCAAACACGAATTATTAGTAACGTTTGTATTCAAAATATGGTGTGATTACAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAA-TCA-ACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAA-TTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAA</genome_strand>
        <mrna_strand>CTGCTGCTATGGGAAAAG......................................................................................................GTGTAACTAAGGAGCAATTTGAGGAAAAATGGACAAGGTCTGGGGCAACAAACTTTAGGTATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATTCANNCACCACCAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCCCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTTACCCTCAAATTTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E229630" ref_strand="-" ref_description="SGN-E229630 [cLEL-4-J24]">
      <seq>aaaaagtgatttcttttggagtgtaaagatttgtggagctttggaactatctcagtttttaggttgtgatcttcaagtccaataaaatatgttttttaagcattttaaataattctgcaggaattttattccctttgggcagtattttgaccttcagattgccttctagtgtgatcgtttgtatctttagctatatttggagttgcaagttgtgctaaaaaaaaaaaaaaaaaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="+" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="986" stop="1804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1286" g_stop="1504" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="220" polyA_stop="235"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="+" ref_id="SGN-E229630" ref_strand="-">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229630" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="1286" e_stop="1504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAA</genome_strand>
        <mrna_strand>AAAAAGTGATTTCTTTTGGAGTGTAAAGATTTGTGGAGCTTTGGAACTATCTCAGTTTTTAGGTTGTGATCTTCAAGTCCAATAAAATATGTTTTTTAAGCATTTTAAATAATTCTGCAGGAATTTTATTCCCTTTGGGCAGTATTTTGACCTTCAGATTGCCTTCTAGTGTGATCGTTTGTATCTTTAGCTATATTTGGAGTTGCAAGTTGTGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E434760" ref_strand="-" ref_description="SGN-E434760 [STM-60-M8]">
      <seq>agattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgcgaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgcttcaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcatagtgcgtttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttagttgcgggaagatgacagagggatcatcttctcaatagagaaacttgacaagggaataaaggattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtcttttttccagcggatagcattataccattttttggtaataaaatttatattgagattctcttcaaaaaaaaaaaaaaaaaaactcgagggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16919" stop="13316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16619" g_stop="16589" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="0.00"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="274" r_length="243" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="590" r_length="316" r_score="0.906"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14854" i_stop="14646" i_length="209">
            <donor d_prob="0.934" d_score="0.94"/>
            <acceptor a_prob="0.798" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14645" g_stop="14613" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="623" r_length="33" r_score="0.545"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E434760" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434760" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16619" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
          <exon e_start="14645" e_stop="14613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTC-TTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAGTTCTCGTTGAAGTGAAACTTGCAAGTTCTTTTTGTTAGTTTTCTTGTTGTCATCATACCAGCGTTATGAACTCTGAAGTTGATTGTGTTTAGTCGTAGTACTAGGATAGACGATACTTTGGAAGTCCTCATGTTTCATTTCTTTTTTTTATCGACTCTACTTGTAAAATTATATTGAATATCTTGTTGTTTATCCTATTGAAAGTCCTATAAGAAAAAGAAAATCTGTCGAGGGTCA</genome_strand>
        <mrna_strand>AGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCGAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTCAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCATAGTGCGTTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAGTTGCGGGAAGAT----GA-C----AGAG-G-GATCATCTTCTCAATAGAGAAACTTGACAAGGGAATAAAGGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTTCCAGCGGATAGCATTATACCA--TTTTTTGGTAATAAAATTTATATTGAGATTCTCTTCA.................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E344266" ref_strand="+" ref_description="SGN-E344266 [cTOF-16-I5]">
      <seq>ctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgttttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccatttttttttgtaataaaatttaaattgagattctcttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16944" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16644" g_stop="16589" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="299" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="628" r_length="329" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14854" i_stop="14637" i_length="218">
            <donor d_prob="0.934" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14636" g_stop="14628" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="637" r_length="9" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E344266" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16644" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
          <exon e_start="14636" e_stop="14628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAGTTCTCGTTGAAGTGAAACTTGCAAGTTCTTTTTGTTAGTTTTCTTGTTGTCATCATACCAGCGTTATGAACTCTGAAGTTGATTGTGTTTAGTCGTAGTACTAGGATAGACGATACTTTGGAAGTCCTCATGTTTCATTTCTTTTTTTTATCGACTCTACTTGTAAAATTATATTGAATATCTTGTTGTTTATCCTATTGAAAGTCCTATAAGAAAAAGAAA</genome_strand>
        <mrna_strand>CTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTTGTAATAAAATTTAAATTGAGATTCTCTTCA..........................................................................................................................................................................................................................AAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E282770" ref_strand="+" ref_description="SGN-E282770 [cLER-15-E13]">
      <seq>tattgtgcctctatgttttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16728" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16428" g_stop="16251" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="507" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14854" i_stop="14637" i_length="218">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14636" g_stop="14628" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="516" r_length="9" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E282770" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16428" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
          <exon e_start="14636" e_stop="14628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAGTTCTCGTTGAAGTGAAACTTGCAAGTTCTTTTTGTTAGTTTTCTTGTTGTCATCATACCAGCGTTATGAACTCTGAAGTTGATTGTGTTTAGTCGTAGTACTAGGATAGACGATACTTTGGAAGTCCTCATGTTTCATTTCTTTTTTTTATCGACTCTACTTGTAAAATTATATTGAATATCTTGTTGTTTATCCTATTGAAAGTCCTATAAGAAAAAGAAA</genome_strand>
        <mrna_strand>TATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA..........................................................................................................................................................................................................................AAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E622661" ref_strand="+" ref_description="SGN-E622661 [73030]">
      <seq>ttatcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttaattgcgggaagatgacagagagaaggatcatcttctcaatagagaaacttgacaagggaataaaggattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtcttttttccagcggatagcattataccattttttggtaataaaatttatattgagattctcttcaaaaacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="15448" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15151" g_stop="14855" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14854" i_stop="14646" i_length="209">
            <donor d_prob="0.934" d_score="0.94"/>
            <acceptor a_prob="0.798" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14645" g_stop="14628" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="305" r_length="17" r_score="0.611"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E622661" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="1.033" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15151" e_stop="14855"/>
          <exon e_start="14645" e_stop="14628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCT-TTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAGTTCTCGTTGAAGTGAAACTTGCAAGTTCTTTTTGTTAGTTTTCTTGTTGTCATCATACCAGCGTTATGAACTCTGAAGTTGATTGTGTTTAGTCGTAGTACTAGGATAGACGATACTTTGGAAGTCCTCATGTTTCATTTCTTTTTTTTATCGACTCTACTTGTAAAATTATATTGAATATCTTGTTGTTTATCCTATTGAAAGTCCTATAAGAAAAAGAAA</genome_strand>
        <mrna_strand>TTATCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAATTGCGGGAAGATGACAGA--G---AGA-AG-GATCATCTTCTCAATAGAGAAACTTGACAAGGGAATAAAGGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTTCCAGCGGATAGCATTATACCA--TTTTTTGGTAATAAAATTTATATTGAGATTCTCTTCA.................................................................................................................................................................................................................-AAAACAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E244651" ref_strand="+" ref_description="SGN-E244651 [cLED-38-E19]">
      <seq>tacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttcncaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16689" stop="14556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16389" g_stop="16251" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="467" r_length="328" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14854" i_stop="14646" i_length="209">
            <donor d_prob="0.934" d_score="0.98"/>
            <acceptor a_prob="0.798" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14645" g_stop="14634" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="479" r_length="12" r_score="0.583"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E244651" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16389" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
          <exon e_start="14645" e_stop="14634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAGTTCTCGTTGAAGTGAAACTTGCAAGTTCTTTTTGTTAGTTTTCTTGTTGTCATCATACCAGCGTTATGAACTCTGAAGTTGATTGTGTTTAGTCGTAGTACTAGGATAGACGATACTTTGGAAGTCCTCATGTTTCATTTCTTTTTTTTATCGACTCTACTTGTAAAATTATATTGAATATCTTGTTGTTTATCCTATTGAAAGTCCTATAAGAAA</genome_strand>
        <mrna_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTC-.................................................................................................................................................................................................................NCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E464347" ref_strand="+" ref_description="SGN-E464347 [cPRO-17-B10]">
      <seq>aatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatctgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgcgaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgcttcaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcatagtgcgtttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttagttgcgggaagatgacagagggatcatcttctcaatagagaaacttgacangggaataaaggattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaggcactgtcaagctagtcttttttccagcggatagcattataccatttttttggtataaaaattatattgagattctcttcaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17242" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16942" g_stop="16811" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="231" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="474" r_length="243" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15183" g_stop="14850" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="794" r_length="320" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E464347" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16942" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTC-TTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAG</genome_strand>
        <mrna_strand>AATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCTGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCGAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTCAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCATAGTGCGTTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAGTTGCGGGAAGAT----GA-C----AGAG-G-GATCATCTTCTCAATAGAGAAACTTGACANGGGAATAAAGGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCT-AAGGCACTGTCAAGCTAGTCTTTTTTCCAGCGGATAGCATTATACCA-TTTTTTTGGT-ATAAAAATTATATTGAGATTCTCTTCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E574069" ref_strand="+" ref_description="SGN-E574069 [33479]">
      <seq>atgcttcaaggctggggaggatgccagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcatagtgcgtttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttagttgcgggaagatgacagagggatcatcttctcaatagagaaacttgacaagggaataaaggattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtcttttttccagcggatagcattataccattttttggtaaataaatttatattgagattctcttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16716" stop="14555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16416" g_stop="16251" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14852" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="486" r_length="319" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E574069" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.025" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16416" e_stop="16251"/>
          <exon e_start="15183" e_stop="14852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTTTTAAGGCTGGGGAGGATG-CAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTC-TTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCA</genome_strand>
        <mrna_strand>ATGCTTCAAGGCTGGGGAGGATGCCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCATAGTGCGTTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAGTTGCGGGAAGAT----GA-C----AGAG-G-GATCATCTTCTCAATAGAGAAACTTGACAAGGGAATAAAGGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTTCCAGCGGATAGCATTATACCA--TTTTTTGGTAAATAAATTTATATTGAGATTCTCTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E624076" ref_strand="+" ref_description="SGN-E624076 [GI|2145472]">
      <seq>gaattctatggtggtggaatgagtggtctttcattggctgacagggccaccattgcaaacatggctcctgaatatggtgcaacaatgggtttcttccctgtagatcatgttactctggaatacctcaagttaacggggagaagtgatgagatagttggaatggtagaggcatatctccgtgcaaataatatgtttgtcgattataatgagcctcaacaagaaaaagtgtactcttcttatttgaacctagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgccttgctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcaacaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagattttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagttgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgccggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttggtccaaagacagtccacgttccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgcgaagagcttcgagaggattcatcgtagtaacttggtaggaatgggtattgtgcctctatgcttcaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcatagtgcgtttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttaattgcgggaagatgacagagggatcatcttctcaatagagaaacttgacaagggaataaaggattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtcttttttcagcggatagcattataccattttttggtaataaaatttatattgagattctcttcaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="20083" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19888" g_stop="19879" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100">
            <donor d_prob="0.882" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19778" g_stop="19636" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="153" r_length="143" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="0.90"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="210" r_length="57" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.812" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="290" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="366" r_length="76" r_score="0.961"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="552" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="620" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="739" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="740" r_stop="861" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="862" r_stop="960" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="961" r_stop="1440" r_length="480" r_score="0.988"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1441" r_stop="1539" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1540" r_stop="1782" r_length="243" r_score="0.971"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1783" r_stop="2097" r_length="315" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2098" polyA_stop="2120"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E624076" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>2111</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19888" e_stop="19879"/>
          <exon e_start="19778" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</genome_strand>
        <mrna_strand>GAATTCTATG....................................................................................................GTGGTGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTCTGGAATACCTCAAGTTAACGGGGAGAAGTGATGAGATA..........................................................................................GTTGGAATGGTAGAGGCATATCTCCGTGCAAATAATATGTTTGTCGATTATAATGAG...........................................................................................CCTCAACAAGAAAAAGTGTACTCTTCTTATTTGAACCTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCCTTGCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAACAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGATTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGTTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACGTTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCGAAGAGCTTCGAGAGGATTCATCGTAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTCAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCATAGTGCGTTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAATTGCGGGAAGAT----GA-C----AGAG-G-GATCATCTTCTCAATAGAGAAACTTGACAAGGGAATAAAGGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTTCAGCGGATAGCATTATACCA--TTTTTTGGTAATAAAATTTATATTGAGATTCTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E539494" ref_strand="-" ref_description="SGN-E539494 [TUS-59-E14]">
      <seq>aaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgttttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttcaaaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17139" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16839" g_stop="16811" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="128" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="371" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="700" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E539494" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539494" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16839" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</genome_strand>
        <mrna_strand>AAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E310203" ref_strand="+" ref_description="SGN-E310203 [cLEZ-8-F20]">
      <seq>tattgtgcctctatgttttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttcaaannaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16728" stop="14555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16428" g_stop="16251" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="507" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="512" polyA_stop="540"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E310203" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16428" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</genome_strand>
        <mrna_strand>TATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E231491" ref_strand="+" ref_description="SGN-E231491 [cLED-4-K20]">
      <seq>tacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16689" stop="14551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16389" g_stop="16251" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="468" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="469" polyA_stop="483"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E231491" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231491" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16389" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</genome_strand>
        <mrna_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E247229" ref_strand="-" ref_description="SGN-E247229 [cLEF-46-F15]">
      <seq>cattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagattctcttaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16656" stop="13316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16356" g_stop="16251" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14855" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="435" r_length="329" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="436" polyA_stop="456"/>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E247229" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247229" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16356" e_stop="16251"/>
          <exon e_start="15183" e_stop="14855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA</genome_strand>
        <mrna_strand>CATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E585628" ref_strand="-" ref_description="SGN-E585628 [68090]">
      <seq>ctttcgccaatatccgccttgtaaacaagctgttaaatggggagttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagttcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgtagtaacttggtaggaatgggtattgtgcctctatgctttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcatagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttaattgcgggaagatgacagagagagggatcatcttctcaatagagaaacttgacaagggaataaaggattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtcttttttccagcggatagcattataccattttttggtaataaaatttatattgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17217" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16917" g_stop="16811" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="205" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="0.98"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="448" r_length="243" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15183" g_stop="14863" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="760" r_length="312" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E585628" ref_strand="-">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585628" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16917" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTC-TTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGAT</genome_strand>
        <mrna_strand>CTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGA-GTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGTTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGTAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCATAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAATTGCGGGAAGATGACAGA--G---AGAG-G-GATCATCTTCTCAATAGAGAAACTTGACAAGGGAATAAAGGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTTCCAGCGGATAGCATTATACCA--TTTTTTGGTAATAAAATTTATATTGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E237473" ref_strand="+" ref_description="SGN-E237473 [cLED-19-O15]">
      <seq>tacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtcttttttctgcggatagcattataccattttttttggtaataaaatttaaaatgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16689" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16389" g_stop="16251" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14863" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="460" r_length="321" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E237473" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16389" e_stop="16251"/>
          <exon e_start="15183" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGAT</genome_strand>
        <mrna_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTTCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAAATGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E228392" ref_strand="+" ref_description="SGN-E228392 [cLED-3-F2]">
      <seq>tacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtcccttttgttggacaaagtgttgtttatttacttctaaaggcactgtcaagctagtctttttcctgcggatagcattataccattttttttggtaataaaatttaaattgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16689" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16389" g_stop="16251" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="14863" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="460" r_length="321" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E228392" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16389" e_stop="16251"/>
          <exon e_start="15183" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGAT</genome_strand>
        <mrna_strand>TACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E739910" ref_strand="+" ref_description="SGN-E739910 [LC19BC09]">
      <seq>gggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgttttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagatgacagagcgtaaagagagagatcttcttctcaatagagcaacttgagaagggaataaatgattttaaaacttttttatgtccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17435" stop="14673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17135" g_stop="16811" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="424" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="667" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15183" g_stop="14973" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="878" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E739910" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>878</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17135" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCT</genome_strand>
        <mrna_strand>GGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E405848" ref_strand="+" ref_description="SGN-E405848 [PPI-1-F8]">
      <seq>gctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatctgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgcgaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgcttcaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcatagtgcgtttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcagttgacacagcgatgaggatcactttgattattcggccacgtttacaagctgcctgcttagttgcgggaagatgacagagggatcatcttctcaatagagaaacttgacaagggaataaaggattttaaaacttttttatgtccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17227" stop="14674"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16927" g_stop="16811" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="216" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="459" r_length="243" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15183" g_stop="14974" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="657" r_length="198" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E405848" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16927" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="14974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCC</genome_strand>
        <mrna_strand>GCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCTGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCGAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTCAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCATAGTGCGTTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAGTTGACACAGCGATGAGGATCACTTTGATTATTCGGCCACGTTTAC-AAGCTGCCTGCTTAGTTGCGGGAAGAT----GA-C----AGAG-G-GATCATCTTCTCAATAGAGAAACTTGACAAGGGAATAAAGGATTTTAAAACTTTTTTATGTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E395963" ref_strand="+" ref_description="SGN-E395963 [TUS-18-P7]">
      <seq>attcttttggattgacaggtcatgagcgctataccattgatcttcctgaaaatattagtgagatccgccctgggctttacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaggtggagttggcttatttcaaccatggaggtattcttcaatatgtcattcgtcaattgacaaagcaatgaggatcgctatgattatttggccacgtttacaaagctgcccgcttaattgtgggaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16690" stop="14757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16390" g_stop="16251" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15183" g_stop="15057" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="267" r_length="127" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E395963" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>267</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395963" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16390" e_stop="16251"/>
          <exon e_start="15183" e_stop="15057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGAT</genome_strand>
        <mrna_strand>ATTCTTTTGGATTGACAGGTCATGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCTTTACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E242386" ref_strand="+" ref_description="SGN-E242386 [cLED-30-C9]">
      <seq>cgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtctgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgcagtgacttggtaggaatgggtattgtgcctctatgttttaaggctggggaggatgcaaatacacttggattgacaggtcaagagcgctataccattgatcttcctgaaaatattagtgagatccggcctgggcaagacgttactgtacaaacagatactggaaaatccttcacctgcgtagtgcggttcgacactgaagtggagttggcttatttcaaccatggaggtattcttgaatatgtcattcgtcaattgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17251" stop="14825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16951" g_stop="16811" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="240" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="483" r_length="243" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15183" g_stop="15125" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="542" r_length="59" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E242386" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16951" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="15125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGAC</genome_strand>
        <mrna_strand>CGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTCTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTGACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAAATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGGCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTGAATATGTCATTCGTCAATTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E561288" ref_strand="+" ref_description="SGN-E561288 [17256]">
      <seq>gttgggagtaaaagctgtaattgctaagagcttcgagaggattcatcgtagtaacttggtaggaatgggtattgtgcctctatgctttaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgattcttcctgaaaatattagtgagatccgccctgggcaagacgttactgtacgaacagattactggaaaatccttcacctgcatagtgcggttcgacactgaggtggagttggcttatttcaaccatggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="16794" stop="14855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16592" g_stop="16589" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="4" r_length="4" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="0.00"/>
            <acceptor a_prob="0.832" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16493" g_stop="16251" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="249" r_length="245" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15183" g_stop="15156" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="277" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E561288" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16592" e_stop="16589"/>
          <exon e_start="16493" e_stop="16251"/>
          <exon e_start="15183" e_stop="15156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGA-TCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGA-TACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAGGTACTCCTAGCTCTCTTCTGTTTTCAGTTACTGATCTTATTTCCTGGTGTTTTATTGTGTGAAAGATGTTGATATGACAATTGTTTTCCATGATAAAAATGCTGCCTCTCTTTGATTTTCTTTTACATTTATAAAGTATTTTGCCTATAGTGCTGAAGGAAATGAGAACAAACAAAAGGGAAAATAAAAGAAATTTATTCTTAAAGCCTTTTTTCTGTATTTATGCTGAAGGAAAGGAGAAGATCTAAAGGGAAAATAACAGAAATTTATTCTTAAAGCTATTTTTGTGTATTTAAATTAGGGCCCTTAATGAACTGGGGCACTTATTTTGTGGGTCTTTTACTGAACTTTCAACGAAGGATGTCAATAATTAATATATATATATATATATATATATATATTTTTTTTTGTTATGACATTATTTAGTAGTAGTAGAATGCAATGTGCCCAACTGGGTATAGAGGTTACATGTAGCCACCCCTAACTAGTTTGAGATTGAAGCATCATCATAAAAATAACAGGATGTCAAGATCTAGAAATACTTGACTAAAAGGGAAGTGTTGGAAAAATCAGACTTCATCTGGGAGCAGTAAATTATGGTTACTGGGTTGTGACTTGTCGCACAGCGACATGACTAGTGAGGATTCATAGAGCTAACCTAACTAGTTTTGGGATTGGGGTGTAATAGTAGTGATTATTATTTCTTAAACAGTAAATCATGGTGCATCCTTGGTAGGAATCAATGTTTACATTTACGATGATTGGAAGATAACATATGTTGTGAAGGTACAAAATAAATAATAGTTTTCATCACCGTCAAAAAAGGAGAAAAATCCTTATCTCTTCTTAGAGTAGCTTCAATGCTCAAACAAGAAATAGAAGATCCTAACCTGTCACTTTTTCATATAACTTTTAAATCACATTATTTCGCATGCATTGTCCACGGTCCACCAATTCGTGTTGCATATTGTCACAACAGCAGTAAATATCCCACATAGTTTCACCTTCACCATTCATTAGTTCTTGGTAGGCATCAACATTTGAAAGCTTCTTTTTATCTTGTGCAGGTGGAGTTGGCTTATTTCAACCATGGAG</genome_strand>
        <mrna_strand>GTTG...............................................................................................GGAGTAAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGTAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATTCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACGAACAGATTACTGGAAAATCCTTCACCTGCATAGTGCGGTTCGACACTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGTTGGCTTATTTCAACCATGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E404551" ref_strand="+" ref_description="SGN-E404551 [PPC-14-M4]">
      <seq>gccgccttgtaaacagctgttaaatggggaggttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatctgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgcgaagagcttcgagaggattcatcgcagtaacttggtaagaatgggtattgtgcctctatgcttcaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttcctgaaaatattagtgagatccgccctgngcaagacgttactgtacaaacagatactggaaaatccttcaactgcatagtgcgtttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17204" stop="15959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16905" g_stop="16811" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="193" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16259" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="428" r_length="235" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E404551" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16905" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCG</genome_strand>
        <mrna_strand>GCCGCCTTGTAAAC-AGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCTGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCGAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAAGAATGGGTATTGTGCCTCTATGCTTCAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGNGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCAACTGCATAGTGCGTTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E289336" ref_strand="+" ref_description="SGN-E289336 [cLES-18-H2]">
      <seq>gacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtctatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatattcgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatgcgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttttaaggctggggaggatgcagatacacttggattgacaggtaaagagcgctataccattgatcttcctgaaaatattaatgagatccgccctgggcaagacgttactgttcaaacagatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17368" stop="15990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17068" g_stop="16811" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="358" r_length="100" r_score="0.949"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16407" i_length="182">
            <donor d_prob="0.908" d_score="0.92"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16406" g_stop="16290" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="475" r_length="117" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E289336" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17068" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16406" e_stop="16290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGT-TGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACT</genome_strand>
        <mrna_strand>GACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCTATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATTCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATGCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTTTAAG......................................................................................................................................................................................GCTGGGGAGGATGCAGATACACTTGGATTGACAGGTAAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAATGAGATCCGCCCTGGGCAAGACGTTACTGTTCAAACAGATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E409633" ref_strand="+" ref_description="SGN-E409633 [PPI-14-L7]">
      <seq>atttcacctgccggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatctgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagtttaagctgtaattgcgaagagcttcgagaggattcatcgcagtaacttggtaggaatgggtattgtgcctctatgcttcaaggctggggaggatgcagatacacttggattgacaggtcaagagcgatataccattgatcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17347" stop="16046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17047" g_stop="16811" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="336" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16346" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="484" r_length="148" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E409633" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17047" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTC</genome_strand>
        <mrna_strand>ATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCTGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTTAAGCTGTAATTGCGAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTCAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGATATACCATTGATCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E485483" ref_strand="+" ref_description="SGN-E485483 [cSTE-18-M9]">
      <seq>aactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttactgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtatcttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagttcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgctaagagcttcgagaggattcatcgtagtaacttggtaggaatgggtattgtgcctctatgctttaanggctggggagatgcagatacacttggattgacanngtcagagcgatataccattgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17596" stop="16074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17387" g_stop="17369" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="499" r_length="480" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="598" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="0.98"/>
            <acceptor a_prob="0.832" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16493" g_stop="16349" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="743" r_length="145" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E485483" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485483" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17387" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAA-GGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATC</genome_strand>
        <mrna_strand>AACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTACTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTATCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGTTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGTAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGCTTTAANGGCTGGGGA-GATGCAGATACACTTGGATTGACANNGTCAGAGCGATATACCATTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E407173" ref_strand="+" ref_description="SGN-E407173 [PPI-6-C6]">
      <seq>ctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagttgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgccggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaaggttggtccaaagacagtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatctgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgttgggagttaaagctgtaattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17767" stop="16174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="113" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="594" r_length="481" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="693" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16493" g_stop="16474" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="713" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E407173" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGG-AGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTGTAATTGC</genome_strand>
        <mrna_strand>GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGTTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAAGGTTGGTCCAAAGACAGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCTGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG...............................................................................................GGAGTTAAAGCTGTAATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E206415" ref_strand="+" ref_description="SGN-E206415 [cLEC-23-C9]">
      <seq>aaagctgtaccaatgggatcctaaatctacatacatccatgagccaccgtatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgaggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtggaagctcccgagattgggctgccaagggaccaatgttgctgggagttaaagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17492" stop="16282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17192" g_stop="16811" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16589" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="481" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95">
            <donor d_prob="0.908" d_score="0.98"/>
            <acceptor a_prob="0.832" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16493" g_stop="16481" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="494" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E206415" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17192" e_stop="16811"/>
          <exon e_start="16687" e_stop="16589"/>
          <exon e_start="16493" e_stop="16481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTGGTGGGTTTTCTTGTGCATTTATTCTTAATTTGGTTGATCCTGTCCTTTTCTTTTTTACCAGAGGATTCCCTAACTACTAAAGAACAATTTAACAGGGAGTTAAAGCTG</genome_strand>
        <mrna_strand>AAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCGTATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGAGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGCTG...............................................................................................GGAGTTAAAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E581761" ref_strand="+" ref_description="SGN-E581761 [7390]">
      <seq>aattggagtgggaaaggatggtaaggatgtgtacttcaggggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatgggatcctcctgggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtatcactactgatcacatttcacctgccggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttgggtccaaagacagtccacattccttctggggaaaagctatccgtgtttgatgctgctatgaaatacaaatcccgtggacaaagcactattatcttgggtggagctgaatatggaacgtggaagttcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17741" stop="16320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17441" g_stop="17369" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="557" r_length="483" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16687" g_stop="16620" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="626" r_length="69" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E581761" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17441" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16620"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCA-GGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCAT-GGATCCTCCT-GGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTT-GGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAA-GTGGAAGCTCCCG</genome_strand>
        <mrna_strand>AATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGGATCCTCCTGGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATCACTACTGATCACATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGGTCCAAAGACAGTCCACATTCCTTCTGGGGAAAAGCTATCCGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCCGTGGACAAAGCACTATTATCTTGGGTGGAGCTGAATATGGAACGTGGAAGTTCCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E403707" ref_strand="+" ref_description="SGN-E403707 [PPC-11-B15]">
      <seq>ttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattaccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagttgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgccggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaatggggaggttggtccaaagacagtccacgttccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatggaagtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17766" stop="16328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17466" g_stop="17369" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="578" r_length="480" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16687" g_stop="16628" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="638" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E403707" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E403707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17466" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGA</genome_strand>
        <mrna_strand>TTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTACCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGTTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAATGGGGAGGTTGGTCCAAAGACAGTCCACGTTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E290734" ref_strand="+" ref_description="SGN-E290734 [cLET-10-D11]">
      <seq>ttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18556" stop="16334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18256" g_stop="18227" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="129" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17290" g_stop="16811" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="609" r_length="480" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16687" g_stop="16634" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="663" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E290734" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18256" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16811"/>
          <exon e_start="16687" e_stop="16634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGA</genome_strand>
        <mrna_strand>TTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E269745" ref_strand="+" ref_description="SGN-E269745 [cLEM-17-P17]">
      <seq>atatgccaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatatcacctgctggaagcattcataaagatagccctgctgctatgtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccggcttgtaaacaatctgttaaacggggaggttggtgcaaagacagtccacattccttgtggaaaaaagctatctgagtttgatgctgttatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17444" stop="16336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17144" g_stop="16811" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16636" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="386" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E269745" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17144" e_stop="16811"/>
          <exon e_start="16687" e_stop="16636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATG</genome_strand>
        <mrna_strand>ATATGCCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATATCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTATGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGGCTTGTAAACAATCTGTTAAACGGGGAGGTTGGTGCAAAGACAGTCCACATTCCTTGTGGAAAAAAGCTATCTGAGTTTGATGCTGTTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E245553" ref_strand="+" ref_description="SGN-E245553 [cLEF-43-N22]">
      <seq>aataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtctatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgctatgaaatacaaatccgctggacaaagcactattatcttggctggagctgaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17527" stop="16337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17227" g_stop="16811" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16637" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="468" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E245553" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245553" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17227" e_stop="16811"/>
          <exon e_start="16687" e_stop="16637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATAT</genome_strand>
        <mrna_strand>AATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCTATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG...........................................................................................................................AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E556434" ref_strand="+" ref_description="SGN-E556434 [cTSD-3-H21]">
      <seq>cgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaaactgttaaacggggaggttggtccaaagacggtcctcattccttctggagaaaagctatcagtgtttgatgctgctatgaaatactaatccactggacaaagcactattatcttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17282" stop="16350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16982" g_stop="16811" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16687" g_stop="16650" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="210" r_length="38" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E556434" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>210</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E556434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16982" e_stop="16811"/>
          <exon e_start="16687" e_stop="16650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATGGTACTTTCCTTTCTCTGTTTCTTAATGGTTCAAATCCTGTTTTCATTAAAGATAAGAGTTTGCATTGCGCATTTCACTTTTGCTGTTTTATGTTGACACTTGTTAAACACGTGATGCCTTCAGAAATACAAATCCGCTGGACAAAGCACTATTATCTTGGC</genome_strand>
        <mrna_strand>CGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAACTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCTCATTCCTTCTGGAGAAAAGCTATCAGTGTTTGATGCTGCTATG...........................................................................................................................AAATACTAATCCACTGGACAAAGCACTATTATCTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E268163" ref_strand="+" ref_description="SGN-E268163 [cLEI-15-D7]">
      <seq>aaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctgttaaacggggaggttggtccaaagacggtccacattccttctggagaaaagctatctgtgtttgatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17749" stop="16515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17449" g_stop="17369" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16815" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="557" r_length="476" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E268163" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17449" e_stop="17369"/>
          <exon e_start="17290" e_stop="16815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGC</genome_strand>
        <mrna_strand>AAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E581233" ref_strand="+" ref_description="SGN-E581233 [6476]">
      <seq>tccaattggagtgggaaaggatggtaaggatgtgtacttcagtggatatatggccatcaactgaagaggagttgctgaggttgttcaatcaagtgtattgccgacatgttcaagagtacatatgaagctattacaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctgggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtatcactactgatcacatttcacctgccggaagcattcataaagatagccctggctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtacttcggcaatatccgccttgtaaacaaggctgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17744" stop="16583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17444" g_stop="17369" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.85"/>
            <acceptor a_prob="0.779" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16883" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="487" r_length="408" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E581233" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17444" e_stop="17369"/>
          <exon e_start="17290" e_stop="16883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAG-GGATATATGGCCATCAACTGAAGA--AATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCT-GGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCT-GCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAA-GCTGTTA</genome_strand>
        <mrna_strand>TCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGTGGATATATGGCCATCAACTGAAGAGGAGTTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCC-GACATGTTCAAGAGTACATATGAAGCTATTAC-AAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATCACTACTGATCACATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTAC-TTCGGCAATATCCGCCTTGTAAACAAGGCTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E269401" ref_strand="+" ref_description="SGN-E269401 [cLEM-2-E1]">
      <seq>gatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaatatccgccttgtaaacaagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17725" stop="16586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17425" g_stop="17369" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16886" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="462" r_length="405" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E269401" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17425" e_stop="17369"/>
          <exon e_start="17290" e_stop="16886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTG</genome_strand>
        <mrna_strand>GATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E247351" ref_strand="+" ref_description="SGN-E247351 [cLEF-46-C23]">
      <seq>aataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcatatggtagccgtcgtggtaatgatgagattatggctaggggtactttcgccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17527" stop="16607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17227" g_stop="16907" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E247351" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17227" e_stop="16907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAAT</genome_strand>
        <mrna_strand>AATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E307393" ref_strand="+" ref_description="SGN-E307393 [cLEY-12-M7]">
      <seq>gaggaggatgtgtacttcagggatatatggccatcaacctgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaaccaaagctgtacccaatgggatcctaaatctaccatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggaccctcatggagtgaaggatgcttacctgcttgctgaacctttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtacccttatggagcggggtgtcgatcgcagggaccttcaactcatatggtagccgtcgtggtaatgatgagattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="17718" stop="16628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17422" g_stop="17369" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17290" g_stop="16928" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="426" r_length="371" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E307393" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E307393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17422" e_stop="17369"/>
          <exon e_start="17290" e_stop="16928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAAGGATGTGTACTTCAGGGATATATGGCCATCAA-CTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAA-CAAAGCTGTA-CCAATGGGATCCTAAATCTA-CATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGA-CCTCATGGAGTGAAGGATGCTTA-CTGCTTGCTGAA-CTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTA-CCTTATGGAGCGGGGTGTCGATCGCAGGGA-CTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATG</genome_strand>
        <mrna_strand>GAGGAGGATGTGTACTTCAGGGATATATGGCCATCAACCTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACCAAAGCTGTACCCAATGGGATCCTAAATCTACCATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCCTCATGGAGTGAAGGATGCTTACCTGCTTGCTGAACCTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCCTTATGGAGCGGGGTGTCGATCGCAGGGACCTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E303775" ref_strand="+" ref_description="SGN-E303775 [cLEX-4-G22]">
      <seq>tatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagcggggtgtcgatcgcagggacttcaactcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18544" stop="16659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18244" g_stop="18227" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="117" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17290" g_stop="16959" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="449" r_length="332" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E303775" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18244" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATA</genome_strand>
        <mrna_strand>TATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E402269" ref_strand="+" ref_description="SGN-E402269 [PPC-7-A14]">
      <seq>cttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagttgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgccggaagcattcataaagatagccctgctgctaaggaccttatggaacggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18818" stop="16687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18518" g_stop="18459" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="182" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="281" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17290" g_stop="16987" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="585" r_length="304" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E402269" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18518" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGG</genome_strand>
        <mrna_strand>CTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGTTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCCGGAAGCATTCATAAAGATAGCCCTGCTGCTAAGGACCTTATGGAACGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E266139" ref_strand="+" ref_description="SGN-E266139 [cLEI-6-B12]">
      <seq>gacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccctgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagatagccctgctgctaggtaccttatggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18649" stop="16690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18349" g_stop="18227" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="222" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17290" g_stop="16990" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="523" r_length="301" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E266139" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18349" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="16990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGC</genome_strand>
        <mrna_strand>GACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E443561" ref_strand="+" ref_description="SGN-E443561 [cSTA-38-L6]">
      <seq>caagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttactgaactttggcgacagtattactactgatcacatttcacctgctggaagcattcataaagata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18882" stop="16717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18678" g_stop="18673" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="125" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="247" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="346" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17290" g_stop="17017" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="620" r_length="274" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E443561" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18678" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATA</genome_strand>
        <mrna_strand>CAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTACTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E253753" ref_strand="+" ref_description="SGN-E253753 [cLEG-32-G14]">
      <seq>aaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatagggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccctgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcacatttcacctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19152" stop="16735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18852" g_stop="18826" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="95" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="214" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="336" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="435" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17290" g_stop="17035" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="691" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E253753" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18852" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTG</genome_strand>
        <mrna_strand>AAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E287907" ref_strand="+" ref_description="SGN-E287907 [cLES-19-L5]">
      <seq>tttgaggggcgtgttcatgccctgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctatcacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactgatcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18610" stop="16747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18310" g_stop="18227" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="183" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17290" g_stop="17047" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="427" r_length="244" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E287907" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18310" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACA</genome_strand>
        <mrna_strand>TTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E457427" ref_strand="+" ref_description="SGN-E457427 [cPRO-2-N17]">
      <seq>gccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaangatgtgtacttcagggatatatggccatcaactgaagaaattgctgangttgttcaatcaagtgtattgccagacatngttcagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagttgtaccaatgggatcctaaatctacatacatccatgagcccacatattttcagggtatgaccatggatcctcctggacctcatggagtgaaggatgcttactgcttgctgaactttggcgacagtattactactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19300" stop="16753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19000" g_stop="18826" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="243" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="362" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="484" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="583" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.779" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17290" g_stop="17053" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="821" r_length="238" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E457427" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>821</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E457427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19000" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACAT-GTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTG</genome_strand>
        <mrna_strand>GCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAANGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAN..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATNGTTC-AGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGTTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCCACATATTTTCAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E485309" ref_strand="+" ref_description="SGN-E485309 [cSTE-17-O10]">
      <seq>tgtatcgggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaatctattacaaagggaaataccatgtggaatgaattatctgtgccaacaacaaagctgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaagggtatgaccatggatcctcctggacctcatggagtgaaagatgcttactgcttactgaactttggtgacaggatcactactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18816" stop="16753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18516" g_stop="18459" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="180" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="279" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.779" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17290" g_stop="17053" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="517" r_length="238" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E485309" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E485309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18516" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTG</genome_strand>
        <mrna_strand>TGTATCGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAATCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAAGATGCTTACTGCTTACTGAACTTTGGTGACAGGATCACTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E434759" ref_strand="+" ref_description="SGN-E434759 [STM-60-M8]">
      <seq>caacgctccggtctctacgttgctctgtaccgaggtggagtcacggtgttgattggaagtctccgatcagtcttactgctcagatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcagagaacccatttaagggaatcctcactggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttgggggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatgggcatcaactgaagaatttgctgaggntgntnncatcagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgcccancaacaaagtgtaccaatgggatcctaaatctacatacatccatgagccaccatatttcaaggggtatgacatggatcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23139" stop="16816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22839" g_stop="22702" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22254" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="171" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22253" i_stop="18859" i_length="3395">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18858" g_stop="18826" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="204" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="272" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="391" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="513" r_length="122" r_score="0.975"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="612" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.779" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="17290" g_stop="17116" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="787" r_length="175" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E434759" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22839" e_stop="22702"/>
          <exon e_start="22286" e_stop="22254"/>
          <exon e_start="18858" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAGGTACTGGGCTTTTGCAGGTTTGCAACAAAAAAGGAGAGAAAAAAGAATGCAGTGTGATGATCTCACCTTACTGATTTGTCTTGTTGGCAGGATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTGGTATGATACTTTATAGTTAGTGAATTGTGGCTAAGTCTCTTGAACTATGCAAAAAGAATGCAGTGAAGTCTATACTTCAGTTCATAAGCATTGAATTGCATATGTTGTCTCATTCATTGCTCACACTTATATGCTTAAGTTTCTTGGTTACTGTTCTCTTAAGTCTTCTCGTGAATGACTATCATACCATTTCATGGTGATTTTTTTTTTGGGAATATCATTTCAGGTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCA-ATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTG-CCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAA-GGGTATGACCATGGATCCTC</genome_strand>
        <mrna_strand>CAACGCTCCGGTCTCTACGTTGCTCTGTACCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGAACCCATTTAAGGGAATCCTCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGGGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGGCATCAACTGAAGAATTTGCTGAG..............................................................................GNTGNTNNCATC-AGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCCANCAACAAAG-TGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGGTATGA-CATGGATCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E465125" ref_strand="+" ref_description="SGN-E465125 [cPRO-20-M7]">
      <seq>ttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcttctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcanggatatatggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgccagacatgttcaagagtacatatgaagctattacaaagggaaataccatgtggaatgaattatctgtgccaacnacaaagttgtaccaatgggatcctaaatctacatacatccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19226" stop="16852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18926" g_stop="18826" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="169" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="288" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="410" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="509" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.779" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17290" g_stop="17152" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="648" r_length="139" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E465125" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18926" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATG</genome_strand>
        <mrna_strand>TTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCTTCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCANGGATATATGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATTACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACNACAAAGTTGTACCAATGGGATCCTAAATCTACATACATCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E559022" ref_strand="+" ref_description="SGN-E559022 [18454]">
      <seq>attgttggctatggctgaccacttgtatcgggaactcagggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtgggaaaggatggtaaggatgtgtacttcagggatatatggggccatcaactgaagaaattgctgaggttgttcaatcaagtgtattgcccgacatgttccagagtacactatgaagctattacacaagggaaataccctgtggcaatgaattatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="18840" stop="16903"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18540" g_stop="18459" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="202" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17467" g_stop="17369" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="303" r_length="101" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.779" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17290" g_stop="17203" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="394" r_length="91" r_score="0.886"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E559022" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18540" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17369"/>
          <exon e_start="17290" e_stop="17203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATAT--GGCCATCAACTGAAGAAATTGCTGAGGTATGTATTCTATTATGTGCTTATGTACCCATGATCAATCATGCAAAAAGTAAATTTACCACGGATTTTCCATGTTAGGTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACA-TATGAAGCTATCACA-AAGGGAAATACCATGTGG-AATGAATTATCTG</genome_strand>
        <mrna_strand>ATTGTTGGCTATGGCTG-ACCACTTGTATCGGGAACTC-AGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGAAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGGGCCATCAACTGAAGAAATTGCTGAG..............................................................................GTTGTTCAATCAAGTGTATTGCCCGACATGTTCCAGAGTACACTATGAAGCTATTACACAAGGGAAATACCCTGTGGCAATGAATTATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E212399" ref_strand="+" ref_description="SGN-E212399 [cLEC-74-F5]">
      <seq>agagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatagggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccctgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaagatccaattggagtggggaaggatggtaangatgtgtacttcagggatatatggccatcaactgaagaaattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19246" stop="17072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18946" g_stop="18826" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="189" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="308" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="430" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17467" g_stop="17372" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="526" r_length="96" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E212399" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18946" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCT</genome_strand>
        <mrna_strand>AGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAANGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E409882" ref_strand="+" ref_description="SGN-E409882 [PPI-15-G22]">
      <seq>caacgctccggtctctacgttgctctgtaccgaggtggagtcacggtgttgattggaagtctccgatcagtcttactgctcagatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcagagaacccatttaagggaatcctcactggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaaatccaattggagtgggaaagatggtaaggatgtgtacttcagggatatatggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23139" stop="17092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22839" g_stop="22702" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22254" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="171" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22253" i_stop="18859" i_length="3395">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18858" g_stop="18826" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="204" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="272" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="391" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="513" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17467" g_stop="17392" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="587" r_length="74" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E409882" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22839" e_stop="22702"/>
          <exon e_start="22286" e_stop="22254"/>
          <exon e_start="18858" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAGGTACTGGGCTTTTGCAGGTTTGCAACAAAAAAGGAGAGAAAAAAGAATGCAGTGTGATGATCTCACCTTACTGATTTGTCTTGTTGGCAGGATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTGGTATGATACTTTATAGTTAGTGAATTGTGGCTAAGTCTCTTGAACTATGCAAAAAGAATGCAGTGAAGTCTATACTTCAGTTCATAAGCATTGAATTGCATATGTTGTCTCATTCATTGCTCACACTTATATGCTTAAGTTTCTTGGTTACTGTTCTCTTAAGTCTTCTCGTGAATGACTATCATACCATTTCATGGTGATTTTTTTTTTGGGAATATCATTTCAGGTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGC</genome_strand>
        <mrna_strand>CAACGCTCCGGTCTCTACGTTGCTCTGTACCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGAACCCATTTAAGGGAATCCTCACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAA-ATCCAATTGGAGT-GGGAAAGATGGTAAGGATGTGTACTTCAGGGATATATGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E570482" ref_strand="+" ref_description="SGN-E570482 [15073]">
      <seq>gtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttggacaagagcaaactatcttgcttcaacctcccttggtggttgcctatgctcttgctggcactgttgatatagactttgagaaaagatccaattggagtgggaaaggatggtcaggattggtgtactttcagggattatatggggccatcaattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19534" stop="17093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19332" g_stop="19318" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="91" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="277" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="345" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="464" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="588" r_length="124" r_score="0.951"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17467" g_stop="17414" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="643" r_length="55" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E570482" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E570482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19332" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
          <exon e_start="17467" e_stop="17414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCT-GACAAGAGCAAACTATCTTGCTTC-ACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACTGTAAGTGAATGCACTTAAGAGATTTATGATTAATTTATCTGGAGAATTACTTGTTCTGTAAGGAAAATGTTGACCATGGAAAATGTTTTCTTGAAAAGTAAGTGGTTTTCTTTCTTGTTTATCTTGTATATAATCTAGATAAGTACTATGGGAGGTAGTGGTGGTGTTGGTAATGGGGGCTACCTGGAGTGGGGGTGAAGATGAGGTGTTTGGAAGGTTGGGAGTATGCAATTAATGTGCAATGTTACTTGTAGAACTTGTTTTCCTCATTTCCAAGGAACTTATTTTCCTAGAGAAAATGTTTTCCAAAAGTTTTGACCAACCGAACATGGGATAATCAGAAAACATTTTCTGGAGAATGTTTTCCTCCATACCATCCACAGCCTTAATGTTGTCCTTTATAGTAAGTGAAAGGAGGAAAAACATATTACAAGTTAAAAAAAGGATTATGCTTTTAAGTAAGTGAAAGGCATCGTGCTTTAGGCAGGGTCATAAATGAGTTACATGGAATGCCTTTAGACATTACTCAGCCTGGTGCAAGCTGCATTGCTCTCAGGAGCACAAATACAATAACGGAAAACAGGGCTCCAATGCTAGATTCCCCCATTGATTTTTCATGCACGCTCTGATATAGGTCTTGGTCTTGAACTCTTGGTCTCTGATATTGTGGAAAAGATTCATGGATGTCTAACTTGTCAATATTAATTGTTCATATCATGTTTATTTATGTTGCTGATGAGAATTATCAATGCTTTGCAGGTTGATATAGACTTTGAG-AAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGAT</genome_strand>
        <mrna_strand>GTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGGACAAGAGCAAACTATCTTGCTTCAACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATATAGACTTTGAGAAAAGATCCAATTGGAGTGGGAAAGGATGGTCAGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E477785" ref_strand="+" ref_description="SGN-E477785 [cSTD-1-B18]">
      <seq>attataatgagcctcaacaagaaaaagtgtactcttcttatttgaacctagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaagggcgtgttcatgccttgacagagcaaactatcttgcttcacctcccttgggtggttgcctatgctcttgctggcactgttgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19701" stop="17925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19499" g_stop="19489" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="0.00"/>
            <acceptor a_prob="0.812" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="91" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="167" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="353" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="421" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="540" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="662" r_length="122" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E477785" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19499" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTT-GGTGGTTGCCTATGCTCTTGCTGGCACT</genome_strand>
        <mrna_strand>ATTATAATGAG...........................................................................................CCTCAACAAGAAAAAGTGTACTCTTCTTATTTGAACCTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGAC-AGAGCAAACTATCTTGCTTCACCTCCCTTGGGTGGTTGCCTATGCTCTTGCTGGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E444475" ref_strand="+" ref_description="SGN-E444475 [cSTA-43-E11]">
      <seq>tgttatgaagcctgtctggcatgcttgcctagatggcaaatttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactcaggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgaactctccggaaatcggaactttgaagggcgtgttcatgccttgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19502" stop="17927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19206" g_stop="19155" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.846"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="0.86"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="238" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="306" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="425" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="547" r_length="122" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E444475" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19206" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT</genome_strand>
        <mrna_strand>TGTTATGAAGCCTGTCTGGCATGCTTGCCTAGATGGCAAATTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCAGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGAACTCTCCGGAAATCGGAACTTTGAAGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265885" ref_strand="+" ref_description="SGN-E265885 [cLEI-11-B12]">
      <seq>tgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatagggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccctgacaagagcaaactatcttgcttcacctcccttggtggttgcctatgctcttgctggcactgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19494" stop="17925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19194" g_stop="19155" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="226" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="294" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="413" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="535" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E265885" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19194" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT</genome_strand>
        <mrna_strand>TGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E440219" ref_strand="+" ref_description="SGN-E440219 [cSTA-15-P6]">
      <seq>gtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatcgggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactttgaggggcgtgttcatgccttgacaagagcaaactatcttgcttcacctnccttggtggttgcctatgctcttgctggcactgttgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19278" stop="17925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18978" g_stop="18826" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="221" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="340" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18348" g_stop="18227" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="462" r_length="122" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E440219" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440219" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18978" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT</genome_strand>
        <mrna_strand>GTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCTTGACAAGAGCAAACTATCTTGCTTCACCTNCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265878" ref_strand="+" ref_description="SGN-E265878 [cLEI-11-J3]">
      <seq>aaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagcaaggtttcaacattgttggctatggctgcaccacttgtatagggaactctggggacttggatgaatctgttgcttctgccatatcagagaacgacattgttgctgctgctgtactctccggaaatcggaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19687" stop="18009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19387" g_stop="19318" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="146" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="332" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="400" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18577" g_stop="18459" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="519" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18348" g_stop="18309" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="559" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E265878" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19387" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18459"/>
          <exon e_start="18348" e_stop="18309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACGGTAAGTCCATACAATTGATTATAAATTAAAATATTACTGTCTGGACTCTATCTAGGTCATGATCATTTTGCTATATTGTTTGACTAATTCAAAATGTATGTATTTTGCAGACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTT</genome_strand>
        <mrna_strand>AAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG..............................................................................................................ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E440220" ref_strand="+" ref_description="SGN-E440220 [cSTA-15-P8]">
      <seq>gtggtcaacttttttttccatgggcaacgtgcttagctaaggcatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaattccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaacaagccttgccccaggctctggggttgttacaaaatatttactcaagagtggtctacagaagtatttaaatcagccaggttgcaacattgttggctatggctgcaccacttgtatcgggaactatggggacttggatgaatctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19278" stop="18181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18978" g_stop="18826" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="221" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.96"/>
            <acceptor a_prob="0.931" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18577" g_stop="18481" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="318" r_length="97" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E440220" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>318</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18978" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTT</genome_strand>
        <mrna_strand>GTGGTCAACTTTTTTTTCCATGGGCAACGTGCTTAGCTAAGGCATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATTCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACAAGCCTTGCCCCAGGCTCTGGGGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAATCAGCCAGGTTGCAACATTGTTGGCTATGGCTGCACCACTTGTATCGGGAACTATGGGGACTTGGATGAATCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E271043" ref_strand="+" ref_description="SGN-E271043 [cLEM-22-H8]">
      <seq>tgcaacaatgggtttcttccctgtagatcatgttactttgcaatacctcaagttaacagggagaagtgatgaaacagttggaatggtagagtcatatctccgtgcaaataatatgtttgtcgattataaagagcctcaacaagaaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaggctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="20011" stop="18256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19711" g_stop="19636" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="133" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.812" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="213" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="289" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="475" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="543" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18577" g_stop="18556" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="565" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E271043" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19711" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAAT</genome_strand>
        <mrna_strand>TGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG...........................................................................................CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E209878" ref_strand="+" ref_description="SGN-E209878 [cLEC-52-K18]">
      <seq>agatcatgttactttgcaatacctcaagttaacagggagaagtgatgaaacagttggaatggtagagtcatatctccgtgcaaataatatgtttgtcgattataaagagcctcaacaagaaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagccttgccccaagctctggtgttgttacaaaatatttactcaagagtggtctacagaagtatttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19987" stop="18257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19687" g_stop="19636" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="109" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.812" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="189" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="265" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="451" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18740" g_stop="18673" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="519" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95">
            <donor d_prob="0.392" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18577" g_stop="18557" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="540" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E209878" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19687" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18673"/>
          <exon e_start="18577" e_stop="18557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAGGTATTGATTGGAAGTTTGTTAAAGAGCAAAGTTCTACTAACCCAGACCATTGTTACTTGAAAACATTGTGATATGTCATTTTCTGCATGTAACAGTGGTCTACAGAAGTATTTAAA</genome_strand>
        <mrna_strand>AGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG...........................................................................................CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAAGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG...............................................................................................TGGTCTACAGAAGTATTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265351" ref_strand="+" ref_description="SGN-E265351 [cLEI-9-J14]">
      <seq>tgactggcatgcttgcctagataacaaatttggatgggagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcatagctcaaacatggcaatgctgtgattgctgctatcacaagttgcacatatacatccaatcccagtgttatgctaggatcagctctggttgccaaaaaagcatttgagctgggtgtacatgttaagccatgggttaaaactagcctttccccatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19494" stop="18404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19194" g_stop="19155" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="0.90"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="226" r_length="186" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18740" g_stop="18704" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="263" r_length="37" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E265351" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>263</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19194" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCT</genome_strand>
        <mrna_strand>TGACTGGCATGCTTGCCTAGATAACAAATTTGGATGGGAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCATAGCTCAAACATGGCAATGCTGTGATTGCTGCTATCACAAGTTGCACATATACATCCAATCCCAGTGTTATGCTAGGATCAGCTCTGGTTGCCAAAAAAGCATTTGAGCTGGGTGTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCCTTTCCCCATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265177" ref_strand="+" ref_description="SGN-E265177 [cLEI-2-O8]">
      <seq>aacaatgggtttcttccctgtagatcatgttactgtgcaatacctcaagttaacagggagaagtgatgaaacagttggaatggtagagtcatatctccgtgcaaataatatgtttgtcgattataaagagcctcaacaagaaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaaagaggtgcaagataaagtggccaagttttccttccatgggcaacctgcagagctcaaacatggcagtgttgtgattgctgctatcacaagttgcacaaatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="20008" stop="18416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19708" g_stop="19636" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="0.98"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="130" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.812" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="210" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="286" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="472" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18740" g_stop="18716" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="497" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E265177" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19708" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCC</genome_strand>
        <mrna_strand>AACAATGGGTTTCTTCCCTGTAGATCATGTTACTGTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG...........................................................................................CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E289467" ref_strand="+" ref_description="SGN-E289467 [cLET-3-J24]">
      <seq>tggaatggtagagtcatatctccgcgcaaataatatgtttgtcgattataaagagcctcaacaagaaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgcgccaaaagaggtgcaagataaaggggccaagttttccttgcatgggcaacctgcagagctcacacatggcagtgctgtgattgctgctatcacaagttgcacacatacatccaatcccagtgttatgctaggagcagctctggttgccaaaaaggcatctgagctgggtctacatgttaagccatgggttaaaactagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="19843" stop="18416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19543" g_stop="19489" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="0.812" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="135" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="211" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19011" g_stop="18826" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="397" r_length="186" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18740" g_stop="18716" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="422" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E289467" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19543" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18826"/>
          <exon e_start="18740" e_stop="18716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACATGTTAGTGCTACTCCATATACTTGCCTTATCATTTGATTGTAATTCAGGCATGCCATCTTAATCCTTGTTCCTGATTATTTTTCAGGTTAAGCCATGGGTTAAAACTAGCC</genome_strand>
        <mrna_strand>TGGAATGGTAGAGTCATATCTCCGCGCAAATAATATGTTTGTCGATTATAAAGAG...........................................................................................CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGCGCCAAAAGAGGTGCAAGATAAAGGGGCCAAGTTTTCCTTGCATGGGCAACCTGCAGAGCTCACACATGGCAGTGCTGTGATTGCTGCTATCACAAGTTGCACACATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT.....................................................................................GTTAAGCCATGGGTTAAAACTAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E265061" ref_strand="+" ref_description="SGN-E265061 [cLEI-2-O12]">
      <seq>aacaatgggtttcttccctgtagatcatgttactgggcaatacctcaagttaacagggagaagtgatgaaacagttggaatggtagagtcatatctccgtgcaaataatatgtttgtcgattataaagagcctcaacaagaaaaggtgtactcttcttatttgaacttagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtgccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="20008" stop="18695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19708" g_stop="19636" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="0.96"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="130" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.812" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="210" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="286" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19011" g_stop="18995" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="303" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E265061" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>303</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19708" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="18995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTGCCAAA</genome_strand>
        <mrna_strand>AACAATGGGTTTCTTCCCTGTAGATCATGTTACTGGGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG...........................................................................................CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTGCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E557834" ref_strand="+" ref_description="SGN-E557834 [16695]">
      <seq>cggaggtattgaggcagaagctgcaatgcttggccagccaatgagcatggtgttgccgtggagttgttgggttcaagctatcaggnaatttgcgaaatggtgtaactgccaccgacttggttctgactgtcactcaaatgctgaggaagcatggtgttgttggaaagtttgttgaattctatggtggtggaatgagtggtctttcattggctgacagggccaccattgcaaacatggctcctgaatatggtgcaacaatgggtttcttccctgtagatcatgttactctggaatacctcaagttaacggggagaagtgatgagatagttggaatggtagaggcatatctccgtgcaaataatatgtttgtcgattataatgagcctcaacaagaaaaagtgtactcttcttatttgaacctagaccttgccgatgttgaaccatgtctgtcagggccaaagagacctcatgaccgtgtgcctttgaaagaaatgaagtctgactggcatgcttgcctagataacaaagttggattcaagggatttgctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="21292" stop="18851"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20992" g_stop="20956" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20023" g_stop="19879" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="183" r_length="146" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19778" g_stop="19636" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="326" r_length="143" r_score="0.951"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="0.90"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19545" g_stop="19489" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="383" r_length="57" r_score="0.965"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.812" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19397" g_stop="19318" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="463" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87">
            <donor d_prob="0.431" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19230" g_stop="19155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="539" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19011" g_stop="19000" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="551" r_length="12" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E557834" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557834" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20992" e_stop="20956"/>
          <exon e_start="20023" e_stop="19879"/>
          <exon e_start="19778" e_stop="19636"/>
          <exon e_start="19545" e_stop="19489"/>
          <exon e_start="19397" e_stop="19318"/>
          <exon e_start="19230" e_stop="19155"/>
          <exon e_start="19011" e_stop="19000"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCC-TGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAGGTATTTCCTGTCCTACCTCATTGCTCTAGTTTCAGTTTTCCAATTGAATCACTGTTACTTTCCCTTACACTTTGTTAAAAAATTGTTTCAGCCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAGGTATTTTCCCGGATTGGACAAATTCTGATATAAGATGCAAAATGTGCTTAAGGTTGGTCTATATAAATGGTTTTTAATCCTCTACAGACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAGGTGAGCGAGCTATTCATTTTGATATTTACCATTAGTTCTCTTGGTTGATCAACTTGTAACATAAATTGTTGTGAGACTAAATTACCCAACCCCAGATTCTGACTTCTGGAAATGCTAATCCAACTTGCTTTACATCGATTTAGGGATTTGCTGTG</genome_strand>
        <mrna_strand>CGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCGTGGAGTTGTTGGGTTCAAGCTATCAGGNAATTTGCGAAATGGTGTAACTGCCACCGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG....................................................................................................GTGGTGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTCTGGAATACCTCAAGTTAACGGGGAGAAGTGATGAGATA..........................................................................................GTTGGAATGGTAGAGGCATATCTCCGTGCAAATAATATGTTTGTCGATTATAATGAG...........................................................................................CCTCAACAAGAAAAAGTGTACTCTTCTTATTTGAACCTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG.......................................................................................ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG...............................................................................................................................................GGATTTGCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E209698" ref_strand="+" ref_description="SGN-E209698 [cLEC-52-C13]">
      <seq>tggggatccaatgctttccaaaacatgcttgttgttccacctgggtctggtattgtgcatcaggtgaatcttgaatatcttggaagggttgtgttcaatagggaaggcttgctctacccagatagcgtggtcggaacagattcccacaccagtatgattgatgggttaggagttgctggctggggtgtcggaggtattgaggcagaagctgcaatgcttggccagccaatgagcatggtgttgcctggagttgtcgggttcaagctatcagggaatttgcgaaatggtgtaactgccactgacttggttctgactgtcactcaaatgctgaggaagcatggtgttgttggaaagtttgttgaattctatggtgagggaatgagtggtctttcattggctgacagggccaccattgcaaacatggctcctgaatatggtgcaacaatgggtttcttccctgtagatcatgttactttgcaatacctcaagttaacagggagaagtgatgaaacagttggaatggtagagtcatatctccgtgcaaataatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="21698" stop="19208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21398" g_stop="21336" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21117" g_stop="20956" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="225" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20023" g_stop="19879" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="370" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19778" g_stop="19636" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="513" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19545" g_stop="19508" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="551" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E209698" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21398" e_stop="21336"/>
          <exon e_start="21117" e_stop="20956"/>
          <exon e_start="20023" e_stop="19879"/>
          <exon e_start="19778" e_stop="19636"/>
          <exon e_start="19545" e_stop="19508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATAT</genome_strand>
        <mrna_strand>TGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG..........................................................................................................................................................................................................................GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCAGTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG....................................................................................................GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E206525" ref_strand="+" ref_description="SGN-E206525 [cLEC-23-F2]">
      <seq>aacagattcccacaccactatgattgatgggttaggagttgctggctggggtgtcggaggtattgaggcagaagctgcaatgcttggccagccaatgagcatggtgttgcctggagttgtcgggttcaagctatcagggaatttgcgaaatggtgtaactgccactgacttggttctgactgtcactcaaatgctgaggaagcatggtgttgatggaaagtttgctgaattctatggtgagggaatgagtggtctttcattggctgacagggccaccattgcaaacatggctcctgaatatggtgcaacaatgggtttcttccctgtagatcatgttactttgcaatacctcaagttaacagggagaagtgatgaaacagttggaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="21346" stop="19334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21046" g_stop="20956" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20023" g_stop="19879" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="236" r_length="145" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100">
            <donor d_prob="0.882" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19778" g_stop="19636" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="379" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19545" g_stop="19537" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="388" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E206525" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21046" e_stop="20956"/>
          <exon e_start="20023" e_stop="19879"/>
          <exon e_start="19778" e_stop="19636"/>
          <exon e_start="19545" e_stop="19537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACAGTAAGTGTTCAGACATTTACTATTAACTAAGTGAAGATAGAGTGTGACAGTTCTTCTTTATATGTGGCTAATCCTCTGTGCAAAAATTAGGTTGGAATG</genome_strand>
        <mrna_strand>AACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGATGGAAAGTTTGCTGAATTCTATG....................................................................................................GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA..........................................................................................GTTGGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E336776" ref_strand="+" ref_description="SGN-E336776 [cTOE-5-G1]">
      <seq>tggaccttgcttgcatgcgtgatgccatgaacaaccttggcagtgattctgacaagattaatccattggttcctgtcgacctagttattgatcactcagttcaagttgatgtaacaaggtcagaaaatgcagtccaggctaatatggagcttgaattccaaaggaataaggagagatttgccttccttaagtggggatccaatgctttccaaaacatgcttgttgttccacctgggtctggtattgtgcatcaggtgaatcttgaatatcttggaagggttgtgttcaatagggaaggcttgctctacccagatagcgtggtcggaacagattcccacaccactatgattgatgggttaggagttgctggctggggtgtcggaggtattgaggcagaagctgcaatgcttggccagccaatgagcatggtgttgcctggagttgtcgggttcaagctatcagggaatttgcgaaatggtgtaactgccactgacttggttctgactgtcactcaaatgctgaggaagcatggtgttgttggaaagtttgttgaattctatggtgagggaatgagtggtctttcattggctgacagggccaccattgcaaacatggctcctgaatatggtgcaacaatgggtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="22115" stop="19396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21815" g_stop="21748" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21747" i_stop="21522" i_length="226">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21521" g_stop="21336" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="254" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21117" g_stop="20956" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="416" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="20023" g_stop="19879" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="561" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19778" g_stop="19696" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="644" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E336776" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21815" e_stop="21748"/>
          <exon e_start="21521" e_stop="21336"/>
          <exon e_start="21117" e_stop="20956"/>
          <exon e_start="20023" e_stop="19879"/>
          <exon e_start="19778" e_stop="19696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTGGTATGATACTTTATAGTTAGTGAATTGTGGCTAAGTCTCTTGAACTATGCAAAAAGAATGCAGTGAAGTCTATACTTCAGTTCATAAGCATTGAATTGCATATGTTGTCTCATTCATTGCTCACACTTATATGCTTAAGTTTCTTGGTTACTGTTCTCTTAAGTCTTCTCGTGAATGACTATCATACCATTTCATGGTGATTTTTTTTTTGGGAATATCATTTCAGGTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATGGTAGATATATAAACATCGACTACTTTTCCATGCAAATAGTTTAACCATTTTTAATAGGTCCACCAGACAAGGACTTGACTACTTGTCTGTTTTCATGTAGGTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTC</genome_strand>
        <mrna_strand>TGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG..................................................................................................................................................................................................................................GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG..........................................................................................................................................................................................................................GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG....................................................................................................GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E326129" ref_strand="+" ref_description="SGN-E326129 [cTOC-16-J14]">
      <seq>ctgcgctcaatgatcccaggattgacaagctaccatactctatcagaattcttctcgaatcagcaatccgtaattgtgacaactttcaagtgaaaaaggaagatgttgagaagattattgactgggaaaattctgcacctaagcttgtggagatacccttcaagcctgcccgtgtcttgctgcaggattttactggtgtaccagctgtggtggaccttgcttgcatgcgtgatgccatgaacaaccttggcagtgattctgacaagattaatccattggttcctgtcgacctagttattgatcactcagttcaagttgatgtaacaaggtcagaaaatgcagtccaggctaatatggagcttgaattccaaaggaataaggagagatttgccttccttaagtggggatccaatgctttccaaaacatgcttgttgttccacctgggtctggtattgtgcatcaggtgaatcttgaatatcttggaagggttgtgttcaatagggaaggcttgctctacccagatagcgtggtcggaacagattcccacaccactatgattgatgggttaggagttgctggctggggtgtcggaggtattgaggcagaagctgcaatgcttggccagccaatgagcatggtgttgcctggagttgtcgggttcaagctatcagggaatttgcgaaatggtgtaactgccactgacttggttctgactgtcactcaatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="22505" stop="19619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22205" g_stop="22182" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22091" g_stop="21931" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="185" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21930" i_stop="21841" i_length="90">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21840" g_stop="21748" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="278" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21747" i_stop="21522" i_length="226">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21521" g_stop="21336" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="464" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21117" g_stop="20956" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="626" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20023" g_stop="19919" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="730" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E326129" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22205" e_stop="22182"/>
          <exon e_start="22091" e_stop="21931"/>
          <exon e_start="21840" e_stop="21748"/>
          <exon e_start="21521" e_stop="21336"/>
          <exon e_start="21117" e_stop="20956"/>
          <exon e_start="20023" e_stop="19919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAGGTACTGGGCTTTTGCAGGTTTGCAACAAAAAAGGAGAGAAAAAAGAATGCAGTGTGATGATCTCACCTTACTGATTTGTCTTGTTGGCAGGATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTGGTATGATACTTTATAGTTAGTGAATTGTGGCTAAGTCTCTTGAACTATGCAAAAAGAATGCAGTGAAGTCTATACTTCAGTTCATAAGCATTGAATTGCATATGTTGTCTCATTCATTGCTCACACTTATATGCTTAAGTTTCTTGGTTACTGTTCTCTTAAGTCTTCTCGTGAATGACTATCATACCATTTCATGGTGATTTTTTTTTTGGGAATATCATTTCAGGTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTG</genome_strand>
        <mrna_strand>CTGCGCTCAATGATCCCAGGATTG..........................................................................................ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG..........................................................................................GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG..................................................................................................................................................................................................................................GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG..........................................................................................................................................................................................................................GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTC-AATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E316446" ref_strand="+" ref_description="SGN-E316446 [cTOA-25-H12]">
      <seq>gattgacaagctaccatactctatcagaattcttctcgaatcagcaatccgtaattgtgacaactttcaagtgaaaaaggaagatgttgagaagattattgactgggaaaattctgcacctaagcttgtggagatacccttcaagcctgcccgtgtcttgctgcaggattttactggtgtaccagctgtggtggaccttgcttgcatgcgtgatgccatgaacaaccttggcagtgattctgacaagattaatccattggttcctgtcgacctagttattgatcactcagttcaagttgatgtaacaaggtcagaaaatgcagtccaggctaatatggagcttgaattccaaaggaataaggagagatttgccttccttaagtggggatccaatgctttccaaaacatgcttgttgttccacctgggtctggtattgtgcatcaggtgaatcttgaatatcttggaagggttgtgttcaatagggaaggcttgctctacccagatagcgtggtcggaacagattcccacaccactatgattgatgggttaggagttgctggctggggtgtcggaggtattgangcagaagctgcaatgcttggccagccaatgagcatggtgttgcctggnnagtgtcggggttcagctatcagggaaattgcgaaatggtgtactgccactgacttggttctgactgtcactcaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="22396" stop="19620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22186" g_stop="22182" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22091" g_stop="21931" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="166" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21930" i_stop="21841" i_length="90">
            <donor d_prob="0.008" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21840" g_stop="21748" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="259" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21747" i_stop="21522" i_length="226">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21521" g_stop="21336" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="445" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21117" g_stop="20956" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="607" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20023" g_stop="19920" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="710" r_length="103" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E316446" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22186" e_stop="22182"/>
          <exon e_start="22091" e_stop="21931"/>
          <exon e_start="21840" e_stop="21748"/>
          <exon e_start="21521" e_stop="21336"/>
          <exon e_start="21117" e_stop="20956"/>
          <exon e_start="20023" e_stop="19920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAGGTACTGGGCTTTTGCAGGTTTGCAACAAAAAAGGAGAGAAAAAAGAATGCAGTGTGATGATCTCACCTTACTGATTTGTCTTGTTGGCAGGATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTGGTATGATACTTTATAGTTAGTGAATTGTGGCTAAGTCTCTTGAACTATGCAAAAAGAATGCAGTGAAGTCTATACTTCAGTTCATAAGCATTGAATTGCATATGTTGTCTCATTCATTGCTCACACTTATATGCTTAAGTTTCTTGGTTACTGTTCTCTTAAGTCTTCTCGTGAATGACTATCATACCATTTCATGGTGATTTTTTTTTTGGGAATATCATTTCAGGTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAGGTATTGTACCTGAAAACTGAATGTGACTTAGCTGCTTGTGCTTCTGGATTTGGTCAATGTGATAGTTGTGCTGAGCTCTAACTATTTCTTGAATCATGAATTCTTCAGCTTTGCATGCTCTTACTTATCTTCCCTCGTTAGAGGATTTGGAGTGAGTTTCCACTTCTGAAACAGTGGATTTGCAAAACTGATAATATTTTTCTCTATTGTAATTTTAGGTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAGGTATGAAACCACGAGTGCGATGATCACCCTTTATTCCTCTGTGAATCCTGGTTTATTCATGTATTGCTGCAAAGAATAGATAGCTATGCCTTTTTGCTAAGCTGCCCCACTCTGCTCTTCTGACACGTGTTCATATCTGCATTTTGTCAAATTTCTAGTGTAGAATATGACTGGCACGTGTAGAAGTTAATGGAGGGACATCAATCAGTGTATATAGTTACACAAGTTTAAGATGTAATATGTTGGCACAATGTTCTCCTAATTAGAGACTAAACATGAAATTTTTAACACTCATATATAACTATGCCAAATCGGAGCAAGGGAGTAAAGTTTTTCTTTACCCTTAATTTTCTAGATTAGAGAGAAGTATGATAGTGAATCATGTAGGGCGTTTCCTTGCCTCATTTGTCTGACCTTGTATTTCTTCTTTCCTTATGGATGGTCTTAGATTGCATCCACTGACCCATTTCTAATTCTAATTTTTGGGCTCTTTCCAAAATTCTATTTATTCCTGAAAGCTAATTTTGGTGATCATGAGGTCATCCGAATGAAGAATTTTATTCGTGAGTCTTTCTGTAGTCGATGCATTCGACTGGTTTCGTATGTCAATTTGACAATAATGAAAAAGAGAGAGAATCCCTAATTGTTGAGAAAAAGAGTTTTGGTTATACTTTTTCTATTCAGCATTTAGTGCTTGTAGCCAGCTATCTTCCAATAAAAATCAGAACAAGTTGGAATATGATGTTATTTTTCCTCATCTTAGAATAGGATGCACTGTGTTCCACTTAATCTGAGCGTGAAACAATACTTCTTTTCCTGTGGCTTTGCTGCTTGCCTGTTCTTCTGTTTGCTTCATGTCTGTAAAAGAATATGTATTCTGATATTTGTACTTAGGATGGCACTTTTGTAATGTTTCTTCTGGATCCTGACAGCCAATGAGCATGGTGTTGCCTGGAG-TTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCT</genome_strand>
        <mrna_strand>GATTG..........................................................................................ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG..........................................................................................GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG..................................................................................................................................................................................................................................GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG..........................................................................................................................................................................................................................GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGANGCAGAAGCTGCAATGCTTGGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATGAGCATGGTGTTGCCTGGNNAGTGTCGGGGTTCAGCTATCAGGGAAATTGCGAAATGGTGT-ACTGCCACTGACTTGGTTCTGACTGTCACTC-AATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E735668" ref_strand="+" ref_description="SGN-E735668 [LC02CB05]">
      <seq>attttagctccatttgatgtgccgcagcttcggcactgtcctttaccatatcagtaatcaataattcaaatcgccatatcttcttcgtcactatcttcatcttcttcctcatcagcaatttccctttttttgtttgggcacacaaccctaggaggttaccattgaatgtgatttgagaaaaaaaaaaactatatatatacatattgggagtcatgtatagtaatacagctcgcaagtactcttcttctgctgcttcttcattattgagagcatcttcttctgttacaaggccgcttgcttcaacttctactgctgctcacgcgccttgtcgtgctggtgctgcttctggtaatcagcagcgttattcatcaacgcttcggtctctgcgttgctctgtgccgaggtggagtcacggtgttgattggaagtcttcaatcagtcttactgctcaaatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcaaagaacccatttaagggaatcctcactggtcttccaaagcccggaggtggtgaattcggaaagttctatagcttacctgcgctcaatgatcccaggattgacaagctaccatactctatcaaaattcttctcgaatcagcaatccgtaattgtgacaactttcaagtgaaaaaggaaaatgttgagaagattattgactgggaaaattctgcacctaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23508" stop="21672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23208" g_stop="22702" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="507" r_length="507" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22182" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="612" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22091" g_stop="21972" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="732" r_length="120" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E735668" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735668" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23208" e_stop="22702"/>
          <exon e_start="22286" e_stop="22182"/>
          <exon e_start="22091" e_stop="21972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGC</genome_strand>
        <mrna_strand>ATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTTCAATCAGTCTTACTGCTCAAATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG..........................................................................................ACAAGCTACCATACTCTATCAAAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAAATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E548230" ref_strand="+" ref_description="SGN-E548230 [TUS-59-E14]">
      <seq>aaaaacgaaaaaacaccataacgcataattagccaagctttttttattttagctccatttgatgtgccgcagcttcggcactgtcctttaccatatcagtaatcaataattcaaatcgccatatcttcttcgtcactatcttcatcttcttcctcatcagcaatttcccttttttttgtttgggcacacaaccctaggaggttaccattgaatgtgatttgagaaaaaaaaaactatatatatacatattggggagtcatgtatagtaatacagctcgcaagtactcttcttctgctgcttcttcattattgagagcatcttcttctgttacaaggccgcttgcttcaacttctactgctgctcacgcgccttgtcgtgctggtgctgcttctggtaatcagcagcgttattcatcaacgcttcggtctctgcgttgctctgtgccgaggtggagtcacggtgttgattggaagtctccgatcagtcttactgctcagatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcagagaacccatttaagggaatcctcactggtcttccaaagcccggaggtggtgaattcggaaagttctatagcttacctgctctcaatgatccccaggatgacaagctaccatactctatcagaattcttctcgaatcagcaatccgtaattgtgancactttcaagtgaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23553" stop="21718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23253" g_stop="22702" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22182" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="658" r_length="105" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22091" g_stop="22018" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="732" r_length="74" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E548230" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23253" e_stop="22702"/>
          <exon e_start="22286" e_stop="22182"/>
          <exon e_start="22091" e_stop="22018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCC-TTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATT-GGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAG</genome_strand>
        <mrna_strand>AAAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAG-AAAAAAAAAACTATATATATACATATTGGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCTCTCAATGATCCCCAGGATG..........................................................................................ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGANCACTTTCAAGTGAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E573459" ref_strand="+" ref_description="SGN-E573459 [32772]">
      <seq>cggcactgtcctttccatatcataaatcaataattcaaatcaccatatcttcttcgtcaccatcttcatcttcatcagcaatttccctttttttgtttgggcacacaaccctaggggatacgattgaatgtgatttgagaaaaaaaactatatatattggtagtcatgtatagtaatacagctcgcaagtactcttcttctgctgcttcttcattattgagagcatcttcttctgttacaaggccgcttgcttcaacttctagtgctgctcacgcgccttgtcgtgctggtgctggggttgcttctggtaatcagcagcgttattcatcaacgctccggtctctacgttgctctgtaccgaggtggagtcacggtgttgattggaagtctccgatcagtcttactgctcagatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcagagaacccatttaagggaatcctcactggtcttccaaagcctggaggtggtgaatttggaaagttctatagcttacctgctctcaatgatcccaggattgacaagctaccatattctattaggattcttctcgaatcagcaatccgtaattgtgacaactttcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23478" stop="21725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23178" g_stop="22702" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22182" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="571" r_length="105" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22091" g_stop="22025" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="638" r_length="67" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E573459" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573459" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23178" e_stop="22702"/>
          <exon e_start="22286" e_stop="22182"/>
          <exon e_start="22091" e_stop="22025"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGC------TGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTGGTAACTTTTCAAGCCCTGGTACATTCTTATATTCATTTTGATGTGTTCCTATTATTGATTATTCTTGGTTTGTTGGTTCCTATGTGACAGACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGT</genome_strand>
        <mrna_strand>CGGCACTGTCCTTT-CCATATCATAAATCAATAATTCAAATCACCATATCTTCTTCGTCACCATCTTCA---TC-T--TCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGG-GGATACGATTGAATGTGATTTGAG---AAAAAAAAC----TATAT--ATATTGGTAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTAGTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGGGGTTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTCCGGTCTCTACGTTGCTCTGTACCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCTGGAGGTGGTGAATTTGGAAAGTTCTATAGCTTACCTGCTCTCAATGATCCCAGGATTG..........................................................................................ACAAGCTACCATATTCTATTAGGATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E444062" ref_strand="+" ref_description="SGN-E444062 [cSTA-41-A8]">
      <seq>ttttagctccatttgatgtgccgcagcttcggcactgtcctttccatatcataaatcaataattcaaatcaccatatcttcttcgtcaccatcttcatcttcatcagcaatttccctttttttgtttgggcacacaaccctaggggatacgattgaatgtgatttgagaaaaaaaactatatatattggtagtcatgtatagtaatacagctcgcaagtactcttcttctgctgcttcttcattattgagagcatcttcttctgttacaaggccgcttgcttcaacttctagtgctgctcacgcgccttgtcgtgctggtgctggggttgcttctggtaatcagcagcgttattcatcaacgctccggtctctacgttgctctgtaccgaggtggagtcacggtgttgattggaagtctccgatcagtcttactgctcagatcaggactgctgcccctgctctcaacgggtttcatcggaaactagctaccatggctgcagagaacccatttaagggaatcctcactggtcttccaaagcctggaggtggtgaatttggaaagttctatagcttacctgctctcaatgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23507" stop="21891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23207" g_stop="22702" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="495" r_length="495" r_score="0.921"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22286" g_stop="22191" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="591" r_length="96" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E444062" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23207" e_stop="22702"/>
          <exon e_start="22286" e_stop="22191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGC------TGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGGGTACTTTTGTCGTTTTATTTAATTTCCCCCAATTCTATTAGTGATCCATAAAGTTAGCGTTTTGATTTTCTGGGGTTCTCGTAAATCTAGATTTATTTTCTGGGTGATTTTGCTTTTTTGATAATTAGAGACTATTTAATTTAATCGGAAGAAAATGATTTATTTGTGATAATAATGGAGTAATAATAATCAGCATTGAAGACAGAGGTTAGCGGAACATGGTGGGTAGGGCCTATGAGTGGGAGACTTTGAAGTTGACCTAAGATATTTGATTTTTATTATTTGTGTTTGTGGGTTGATATTTCATAAAAACTTAGATTTTTGTGAGAAGGATTACTAGGAGTTGCTGTGAGTGAATCAATTCTTAGTAGAAAATCAAGAATCTAATTCCTTTTTCTTTTAATGATGGATTCAGCTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATC</genome_strand>
        <mrna_strand>TTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTT-CCATATCATAAATCAATAATTCAAATCACCATATCTTCTTCGTCACCATCTTCA---TC-T--TCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGG-GGATACGATTGAATGTGATTTGAG---AAAAAAAAC----TATAT--ATATTGGTAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTAGTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGGGGTTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTCCGGTCTCTACGTTGCTCTGTACCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCTGGAGGTGGTGAATTTGGAAAGTTCTATAGCTTACCTGCTCTCAATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-yKfPzC/sgn_ests_tomato_potato" ref_id="SGN-E282554" ref_strand="+" ref_description="SGN-E282554 [cLER-18-L9]">
      <seq>aaaacgaaaaaacaccataacgcataattagccaagctttttttattttagctccatttgatgtgccgcagcttcggcactgtcctttaccatatcagtaatcaataattcaaatcgccatatcttcttcgtcactatcttcatcttcttcctcatcagcaatttcccttttttttgtttgggcacacaaccctaggaggttaccattgaatgtgatttgagaaaaaaaaaactatatatatacatattgggagtcatgtatagtaatacagctcgcaagtactcttcttctgctgcttcttcattattgagagcatcttcttctgttacaaggccgcttgcttcaacttctactgctgctcacgcgccttgtcgtgctggtgctgcttctggtaatcagcagcgttattcatcaacgcttcggtctctgcgttgctctgtgccgaggtggagtcacggtgttgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C07HBa0073N22-KbBEk/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C07HBa0073N22.1" temp_strand="-" temp_description="C07HBa0073N22.1  AC212624.1 htgs_phase:3 submitted_to_sgn_as:gi|158262120|gb|AC212624.1| upload_account_name:france Solanum lycopersicum chromosome 7 clone C07HBa0073N22, complete sequence">
        <position start="23552" stop="22486"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23252" g_stop="22786" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="467" r_length="467" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C07HBa0073N22.1" gen_strand="-" ref_id="SGN-E282554" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C07HBa0073N22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23252" e_stop="22786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCC-TTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATT</genome_strand>
        <mrna_strand>AAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAG-AAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>123</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1" PGL_stop="1714"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1" e_stop="1063"/>
            <exon e_start="1166" e_stop="1565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.999"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="1" e_stop="1063" e_length="1063"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="1166" e_stop="1565" e_length="400"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1" stop="619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84" stop="552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110" stop="808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132" stop="693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="173" stop="552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="183" stop="685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="197" stop="799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="208" stop="696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="221" stop="493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="233" stop="880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="255" stop="674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="259" stop="795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="280" stop="869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="280" stop="783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="409" stop="991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="409" stop="892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="409" stop="803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="438" stop="1061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="438" stop="798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="494" stop="1010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="499" stop="877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="500" stop="833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="529" stop="1063"/>
              <exon start="1166" stop="1205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="529" stop="1059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="529" stop="1016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="536" stop="890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="569" stop="891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="597" stop="1016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232840" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="624" stop="1023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="624" stop="1016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="726" stop="1063"/>
              <exon start="1166" stop="1239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="731" stop="1063"/>
              <exon start="1166" stop="1518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="873" stop="1063"/>
              <exon start="1166" stop="1553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266551" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="883" stop="1063"/>
              <exon start="1166" stop="1551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377949" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="891" stop="1063"/>
              <exon start="1166" stop="1499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266084" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="940" stop="1063"/>
              <exon start="1166" stop="1504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267928" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="955" stop="1063"/>
              <exon start="1166" stop="1504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266338" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="957" stop="1063"/>
              <exon start="1166" stop="1558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266128" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="974" stop="1063"/>
              <exon start="1166" stop="1522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266350" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="975" stop="1063"/>
              <exon start="1166" stop="1547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268475" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="985" stop="1063"/>
              <exon start="1166" stop="1565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237360" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="995" stop="1063"/>
              <exon start="1166" stop="1565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236897" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1046" stop="1063"/>
              <exon start="1166" stop="1504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229479" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1286" stop="1504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229630" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCTCTGTTACTAAGAAATGTGGTCATATGGCTGGTAAAGTTCTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG : GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAATCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTATCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTTTTGATGCTTTTTCACAACTTATTATTCAAAT</gDNA_template>
            <first_frame> K  L  F  V  E  R  G  A  A  G  V  H  I  E  D  Q  S  S  V  T  K  K  C  G  H  M  A  G  K  V  L  V  A  V  S  E  H  I  N  R  L  V  A  A  R  L  Q  F  D  V  M  G  T  E  T  V  L  V  A  R  T  D  A  V  A  A  T  L  I  Q  T  N  V  D  T  R  D  H  Q  F  I  L  G  A  S  N  P  N  L  K  G  K  G  L  A  T  L  L  S  E  A  M  A  A  G  K  T  G  P  E  L  Q  A  I  E  D  N  W  L  G  M  A  E  L  K  T  F  S  Q  C  V  T  D  A  I  K  K  M  N  L  A  E  Y  E  K  Q  R  K  L  N  E  W  M  N  H  S  S  Y  E  K  C  L  S  H  E  Q  A  R  E  V  A  E  R  L  G  L  P  N  L  F  W  D  W  D  L  P  R  T  R  E  G  F  Y  R  F  Q  G  S  V  E  A  A  I  V  R  G  W  A  F  A  E  Y  C  D  L  V  W  M  E  T  S  S  P  D  M  V  E  C  T  K  F  S  Q  G  V  K  T  L  R  P  E  L  M  L  A  Y  N  L  S  P  S  F  N  W  D  A  S  G  M  N  D  N  Q  M  M  D  F  I  P  R  I  A  K  L  G  Y  C  W  Q  F  I  T  L  A  G  F  H  A  D  A  L  I  V  D  T  F  A  K  D  F  A  R  R  G  M  L  A  Y  V  E  K  I  Q  R  E  E  R  S  N  G  V  D  T  L  A  H  Q  K  W  S  G  A  N  Y  Y  D  R  V  L  R  T  V  Q  G  G  I  T  S  T  A  A  M  G  K   : G  V  T  E  E  Q  F  E  E  K  W  T  R  T  G  A  T  N  L  G  D  G  S  V  V  I  A  K  A  R  M  *  E  N  Q  Q  Q  Q  T  K  K  K  V  I  S  F  G  V  *  R  F  V  E  L  W  N  Y  L  N  F  *  V  V  N  F  K  Y  N  K  R  C  F  L  S  I  L  N  N  S  S  G  I  *  I  I  L  G  I  I  L  T  F  K  L  P  T  S  V  I  I  C  I  F  I  Y  I  W  T  S  K  L  C  *  S  F  Q  L  L  I  N  G  I  F  F  D  A  F  S  Q  L  I  I  Q   </first_frame>
            <second_frame>  S  F  S  W  S  A  V  L  L  V  S  T  L  R  I  S  P  L  L  L  R  N  V  V  I  W  L  V  K  F  L  L  L  *  V  N  I  L  T  G  L  W  L  Q  G  C  S  L  M  S  W  G  L  R  Q  S  S  W  L  V  L  M  R  L  Q  P  H  *  S  K  P  M  W  I  Q  G  I  I  S  S  F  W  V  L  P  T  R  I  S  R  A  R  V  W  L  L  F  C  L  K  L  W  L  Q  A  K  Q  G  R  N  F  K  P  L  R  I  T  G  L  E  W  L  N  S  R  H  F  L  N  V  S  L  M  Q  S  R  K  *  T  S  R  S  M  R  S  R  G  S  *  T  N  G  *  I  I  R  A  M  R  N  V  F  R  T  N  K  L  G  R  *  L  K  D  L  A  F  L  I  S  F  G  T  G  T  C  L  E  P  E  K  G  S  T  G  F  R  A  Q  *  R  L  Q  L  F  A  D  G  L  L  P  S  T  V  I  *  S  G  W  R  H  Q  V  L  I  W  W  N  A  Q  N  F  L  K  E  L  R  L  *  G  L  S  *  C  W  L  T  I  C  L  P  H  S  I  G  M  H  Q  G  *  M  I  T  K  *  W  I  S  F  Q  E  *  P  N  *  A  I  A  G  S  S  L  L  *  L  V  S  M  L  M  H  S  S  S  T  R  L  P  R  I  S  P  G  G  E  C  W  P  M  W  R  K  Y  K  E  R  R  G  A  M  V  L  I  H  W  L  I  R  N  G  L  G  L  I  T  M  I  E  F  *  G  L  S  R  E  A  S  L  Q  L  L  L  W  E  K  :  V  *  L  R  S  N  L  R  K  N  G  Q  G  L  G  Q  Q  T  *  V  M  E  V  W  *  L  Q  R  Q  G  C  K  K  I  N  N  N  K  Q  K  K  K  *  F  L  L  E  C  E  D  L  W  S  F  G  T  I  S  I  F  R  L  *  T  S  S  T  I  K  D  V  F  *  A  F  *  I  I  L  Q  G  F  E  S  F  W  A  L  F  *  P  S  N  C  L  L  V  *  S  F  V  S  L  S  I  F  G  L  P  S  C  A  K  V  F  S  C  L  L  M  E  Y  F  L  M  L  F  H  N  L  L  F  K  </second_frame>
            <third_frame>   A  F  R  G  A  R  C  C  W  C  P  H  *  G  S  V  L  C  Y  *  E  M  W  S  Y  G  W  *  S  S  C  C  C  K  *  T  Y  *  Q  A  C  G  C  K  V  A  V  *  C  H  G  D  *  D  S  P  R  G  S  Y  *  C  G  C  S  H  I  D  P  N  Q  C  G  Y  K  G  S  S  V  H  F  G  C  F  Q  P  E  S  Q  G  Q  G  F  G  Y  S  F  V  *  S  Y  G  C  R  Q  N  R  A  G  T  S  S  H  *  G  *  L  A  W  N  G  *  T  Q  D  I  F  S  M  C  H  *  C  N  Q  E  N  E  P  R  G  V  *  E  A  E  E  V  E  R  M  D  E  S  F  E  L  *  E  M  S  F  A  R  T  S  *  G  G  S  *  K  T  W  P  S  *  S  L  L  G  L  G  L  A  *  N  Q  R  R  V  L  Q  V  S  G  L  S  R  G  C  N  C  S  R  M  G  F  C  R  V  L  *  S  S  L  D  G  D  I  K  S  *  Y  G  G  M  H  K  I  F  S  R  S  *  D  S  K  A  *  A  D  A  G  L  Q  S  V  S  L  I  Q  L  G  C  I  R  D  E  *  *  P  N  D  G  F  H  S  K  N  S  Q  I  R  L  L  L  A  V  H  Y  F  S  W  F  P  C  *  C  T  H  R  R  H  V  C  Q  G  F  R  Q  E  G  N  V  G  L  C  G  E  N  T  K  R  G  E  E  Q  W  C  *  Y  I  G  S  S  E  M  V  W  G  *  L  L  *  *  S  S  K  D  C  P  G  R  H  H  F  N  C  C  Y  G  K  R :   C  N  *  G  A  I  *  G  K  M  D  K  D  W  G  N  K  L  R  *  W  K  C  G  D  C  K  G  K  D  V  R  K  S  T  T  T  N  K  K  K  S  D  F  F  W  S  V  K  I  C  G  A  L  E  L  S  Q  F  L  G  C  E  L  Q  V  Q  *  K  M  F  F  K  H  F  K  *  F  F  R  D  L  N  H  F  G  H  Y  F  D  L  Q  I  A  Y  *  C  D  H  L  Y  L  Y  L  Y  L  D  F  Q  V  V  L  K  F  S  V  A  Y  *  W  N  I  F  *  C  F  F  T  T  Y  Y  S  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1" stop="1063"/>
                    <exon start="1166" stop="1260"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDVMGTETVLVARTDAVAATLIQTNVDTRDHQFILGASNPNLKGKGLATLLSEAMAAGKTGPELQAIEDNWLGMAELKTFSQCVTDAIKKMNLAEYEKQRKLNEWMNHSSYEKCLSHEQAREVAERLGLPNLFWDWDLPRTREGFYRFQGSVEAAIVRGWAFAEYCDLVWMETSSPDMVECTKFSQGVKTLRPELMLAYNLSPSFNWDASGMNDNQMMDFIPRIAKLGYCWQFITLAGFHADALIVDTFAKDFARRGMLAYVEKIQREERSNGVDTLAHQKWSGANYYDRVLRTVQGGITSTAAMGKGVTEEQFEEKWTRTGATNLGDGSVVIAKARM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="1" e_stop="1063"/>
            <exon e_start="1166" e_stop="1413"/>
            <exon e_start="1710" e_stop="1714"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.999"/>
          <exon-intron don_prob="0.000" acc_prob="0.834" e_score="0.996"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="1" e_stop="1063" e_length="1063"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="1064" i_stop="1165" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="1166" e_stop="1413" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.834">
            <gDNA_intron_boundary i_start="1414" i_stop="1709" i_length="296"/>
          </intron>
          <exon e_serial="3" e_score="0.600">
            <gDNA_exon_boundary e_start="1710" e_stop="1714" e_length="5"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1" stop="619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406637" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84" stop="552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110" stop="808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132" stop="693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="173" stop="552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="183" stop="685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="197" stop="799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="208" stop="696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="218" stop="644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="221" stop="493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="233" stop="880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="255" stop="674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="259" stop="795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="280" stop="869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="280" stop="783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="409" stop="991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266585" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="409" stop="892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="409" stop="803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="438" stop="1061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="438" stop="798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242615" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="494" stop="1010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="499" stop="877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="500" stop="833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="529" stop="1063"/>
              <exon start="1166" stop="1205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="529" stop="1059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="529" stop="1016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="536" stop="890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="569" stop="891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="597" stop="1016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232840" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="624" stop="1023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="624" stop="1016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="726" stop="1063"/>
              <exon start="1166" stop="1239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284721" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="764" stop="1063"/>
              <exon start="1166" stop="1413"/>
              <exon start="1710" stop="1714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265792" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCTCTGTTACTAAGAAATGTGGTCATATGGCTGGTAAAGTTCTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAG : GTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGAACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGA : ATAGA</gDNA_template>
            <first_frame> K  L  F  V  E  R  G  A  A  G  V  H  I  E  D  Q  S  S  V  T  K  K  C  G  H  M  A  G  K  V  L  V  A  V  S  E  H  I  N  R  L  V  A  A  R  L  Q  F  D  V  M  G  T  E  T  V  L  V  A  R  T  D  A  V  A  A  T  L  I  Q  T  N  V  D  T  R  D  H  Q  F  I  L  G  A  S  N  P  N  L  K  G  K  G  L  A  T  L  L  S  E  A  M  A  A  G  K  T  G  P  E  L  Q  A  I  E  D  N  W  L  G  M  A  E  L  K  T  F  S  Q  C  V  T  D  A  I  K  K  M  N  L  A  E  Y  E  K  Q  R  K  L  N  E  W  M  N  H  S  S  Y  E  K  C  L  S  H  E  Q  A  R  E  V  A  E  R  L  G  L  P  N  L  F  W  D  W  D  L  P  R  T  R  E  G  F  Y  R  F  Q  G  S  V  E  A  A  I  V  R  G  W  A  F  A  E  Y  C  D  L  V  W  M  E  T  S  S  P  D  M  V  E  C  T  K  F  S  Q  G  V  K  T  L  R  P  E  L  M  L  A  Y  N  L  S  P  S  F  N  W  D  A  S  G  M  N  D  N  Q  M  M  D  F  I  P  R  I  A  K  L  G  Y  C  W  Q  F  I  T  L  A  G  F  H  A  D  A  L  I  V  D  T  F  A  K  D  F  A  R  R  G  M  L  A  Y  V  E  K  I  Q  R  E  E  R  S  N  G  V  D  T  L  A  H  Q  K  W  S  G  A  N  Y  Y  D  R  V  L  R  T  V  Q  G  G  I  T  S  T  A  A  M  G  K   : G  V  T  E  E  Q  F  E  E  K  W  T  R  T  G  A  T  N  L  G  D  G  S  V  V  I  A  K  A  R  M  *  E  N  Q  Q  Q  Q  T  K  K  K  V  I  S  F  G  V  *  R  F  V  E  L  W  N  Y  L  N  F  *  V  V  N  F  K  Y  N  K  R  C  F  L  S  I  L  N  N  S  S  G  I  *  :  I   </first_frame>
            <second_frame>  S  F  S  W  S  A  V  L  L  V  S  T  L  R  I  S  P  L  L  L  R  N  V  V  I  W  L  V  K  F  L  L  L  *  V  N  I  L  T  G  L  W  L  Q  G  C  S  L  M  S  W  G  L  R  Q  S  S  W  L  V  L  M  R  L  Q  P  H  *  S  K  P  M  W  I  Q  G  I  I  S  S  F  W  V  L  P  T  R  I  S  R  A  R  V  W  L  L  F  C  L  K  L  W  L  Q  A  K  Q  G  R  N  F  K  P  L  R  I  T  G  L  E  W  L  N  S  R  H  F  L  N  V  S  L  M  Q  S  R  K  *  T  S  R  S  M  R  S  R  G  S  *  T  N  G  *  I  I  R  A  M  R  N  V  F  R  T  N  K  L  G  R  *  L  K  D  L  A  F  L  I  S  F  G  T  G  T  C  L  E  P  E  K  G  S  T  G  F  R  A  Q  *  R  L  Q  L  F  A  D  G  L  L  P  S  T  V  I  *  S  G  W  R  H  Q  V  L  I  W  W  N  A  Q  N  F  L  K  E  L  R  L  *  G  L  S  *  C  W  L  T  I  C  L  P  H  S  I  G  M  H  Q  G  *  M  I  T  K  *  W  I  S  F  Q  E  *  P  N  *  A  I  A  G  S  S  L  L  *  L  V  S  M  L  M  H  S  S  S  T  R  L  P  R  I  S  P  G  G  E  C  W  P  M  W  R  K  Y  K  E  R  R  G  A  M  V  L  I  H  W  L  I  R  N  G  L  G  L  I  T  M  I  E  F  *  G  L  S  R  E  A  S  L  Q  L  L  L  W  E  K  :  V  *  L  R  S  N  L  R  K  N  G  Q  G  L  G  Q  Q  T  *  V  M  E  V  W  *  L  Q  R  Q  G  C  K  K  I  N  N  N  K  Q  K  K  K  *  F  L  L  E  C  E  D  L  W  S  F  G  T  I  S  I  F  R  L  *  T  S  S  T  I  K  D  V  F  *  A  F  *  I  I  L  Q  G  F  E :   *  </second_frame>
            <third_frame>   A  F  R  G  A  R  C  C  W  C  P  H  *  G  S  V  L  C  Y  *  E  M  W  S  Y  G  W  *  S  S  C  C  C  K  *  T  Y  *  Q  A  C  G  C  K  V  A  V  *  C  H  G  D  *  D  S  P  R  G  S  Y  *  C  G  C  S  H  I  D  P  N  Q  C  G  Y  K  G  S  S  V  H  F  G  C  F  Q  P  E  S  Q  G  Q  G  F  G  Y  S  F  V  *  S  Y  G  C  R  Q  N  R  A  G  T  S  S  H  *  G  *  L  A  W  N  G  *  T  Q  D  I  F  S  M  C  H  *  C  N  Q  E  N  E  P  R  G  V  *  E  A  E  E  V  E  R  M  D  E  S  F  E  L  *  E  M  S  F  A  R  T  S  *  G  G  S  *  K  T  W  P  S  *  S  L  L  G  L  G  L  A  *  N  Q  R  R  V  L  Q  V  S  G  L  S  R  G  C  N  C  S  R  M  G  F  C  R  V  L  *  S  S  L  D  G  D  I  K  S  *  Y  G  G  M  H  K  I  F  S  R  S  *  D  S  K  A  *  A  D  A  G  L  Q  S  V  S  L  I  Q  L  G  C  I  R  D  E  *  *  P  N  D  G  F  H  S  K  N  S  Q  I  R  L  L  L  A  V  H  Y  F  S  W  F  P  C  *  C  T  H  R  R  H  V  C  Q  G  F  R  Q  E  G  N  V  G  L  C  G  E  N  T  K  R  G  E  E  Q  W  C  *  Y  I  G  S  S  E  M  V  W  G  *  L  L  *  *  S  S  K  D  C  P  G  R  H  H  F  N  C  C  Y  G  K  R :   C  N  *  G  A  I  *  G  K  M  D  K  D  W  G  N  K  L  R  *  W  K  C  G  D  C  K  G  K  D  V  R  K  S  T  T  T  N  K  K  K  S  D  F  F  W  S  V  K  I  C  G  A  L  E  L  S  Q  F  L  G  C  E  L  Q  V  Q  *  K  M  F  F  K  H  F  K  *  F  F  R  D  L   : N  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1" stop="1063"/>
                    <exon start="1166" stop="1260"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDVMGTETVLVARTDAVAATLIQTNVDTRDHQFILGASNPNLKGKGLATLLSEAMAAGKTGPELQAIEDNWLGMAELKTFSQCVTDAIKKMNLAEYEKQRKLNEWMNHSSYEKCLSHEQAREVAERLGLPNLFWDWDLPRTREGFYRFQGSVEAAIVRGWAFAEYCDLVWMETSSPDMVECTKFSQGVKTLRPELMLAYNLSPSFNWDASGMNDNQMMDFIPRIAKLGYCWQFITLAGFHADALIVDTFAKDFARRGMLAYVEKIQREERSNGVDTLAHQKWSGANYYDRVLRTVQGGITSTAAMGKGVTEEQFEEKWTRTGATNLGDGSVVIAKARM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="23253" PGL_stop="14613"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23253" e_stop="22702"/>
            <exon e_start="22286" e_stop="22182"/>
            <exon e_start="22091" e_stop="21931"/>
            <exon e_start="21840" e_stop="21748"/>
            <exon e_start="21521" e_stop="21336"/>
            <exon e_start="21117" e_stop="20956"/>
            <exon e_start="20023" e_stop="19879"/>
            <exon e_start="19778" e_stop="19636"/>
            <exon e_start="19545" e_stop="19489"/>
            <exon e_start="19397" e_stop="19318"/>
            <exon e_start="19230" e_stop="19155"/>
            <exon e_start="19011" e_stop="18826"/>
            <exon e_start="18740" e_stop="18673"/>
            <exon e_start="18577" e_stop="18459"/>
            <exon e_start="18348" e_stop="18227"/>
            <exon e_start="17467" e_stop="17369"/>
            <exon e_start="17290" e_stop="16811"/>
            <exon e_start="16687" e_stop="16589"/>
            <exon e_start="16493" e_stop="16251"/>
            <exon e_start="15183" e_stop="14855"/>
            <exon e_start="14645" e_stop="14613"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="0.991"/>
          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="0.990"/>
          <exon-intron don_prob="0.008" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.812" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.392" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.611"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="23253" e_stop="22702" e_length="552"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="22286" e_stop="22182" e_length="105"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.978">
            <gDNA_intron_boundary i_start="22181" i_stop="22092" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22091" e_stop="21931" e_length="161"/>
          </exon>
          <intron i_serial="3" don_prob="0.008" acc_prob="0.999">
            <gDNA_intron_boundary i_start="21930" i_stop="21841" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21840" e_stop="21748" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="21747" i_stop="21522" i_length="226"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21521" e_stop="21336" e_length="186"/>
          </exon>
          <intron i_serial="5" don_prob="0.967" acc_prob="0.989">
            <gDNA_intron_boundary i_start="21335" i_stop="21118" i_length="218"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21117" e_stop="20956" e_length="162"/>
          </exon>
          <intron i_serial="6" don_prob="0.957" acc_prob="0.998">
            <gDNA_intron_boundary i_start="20955" i_stop="20024" i_length="932"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="20023" e_stop="19879" e_length="145"/>
          </exon>
          <intron i_serial="7" don_prob="0.882" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19878" i_stop="19779" i_length="100"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="19778" e_stop="19636" e_length="143"/>
          </exon>
          <intron i_serial="8" don_prob="0.461" acc_prob="0.894">
            <gDNA_intron_boundary i_start="19635" i_stop="19546" i_length="90"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="19545" e_stop="19489" e_length="57"/>
          </exon>
          <intron i_serial="9" don_prob="0.972" acc_prob="0.812">
            <gDNA_intron_boundary i_start="19488" i_stop="19398" i_length="91"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="19397" e_stop="19318" e_length="80"/>
          </exon>
          <intron i_serial="10" don_prob="0.431" acc_prob="0.994">
            <gDNA_intron_boundary i_start="19317" i_stop="19231" i_length="87"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="19230" e_stop="19155" e_length="76"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.980">
            <gDNA_intron_boundary i_start="19154" i_stop="19012" i_length="143"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="19011" e_stop="18826" e_length="186"/>
          </exon>
          <intron i_serial="12" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="18740" e_stop="18673" e_length="68"/>
          </exon>
          <intron i_serial="13" don_prob="0.392" acc_prob="0.931">
            <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="18577" e_stop="18459" e_length="119"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="18348" e_stop="18227" e_length="122"/>
          </exon>
          <intron i_serial="15" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="17467" e_stop="17369" e_length="99"/>
          </exon>
          <intron i_serial="16" don_prob="0.998" acc_prob="0.779">
            <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="17290" e_stop="16811" e_length="480"/>
          </exon>
          <intron i_serial="17" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="16687" e_stop="16589" e_length="99"/>
          </exon>
          <intron i_serial="18" don_prob="0.908" acc_prob="0.832">
            <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="16493" e_stop="16251" e_length="243"/>
          </exon>
          <intron i_serial="19" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="15183" e_stop="14855" e_length="329"/>
          </exon>
          <intron i_serial="20" don_prob="0.934" acc_prob="0.798">
            <gDNA_intron_boundary i_start="14854" i_stop="14646" i_length="209"/>
          </intron>
          <exon e_serial="21" e_score="0.611">
            <gDNA_exon_boundary e_start="14645" e_stop="14613" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
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          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16356" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247229" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15151" stop="14855"/>
              <exon start="14645" stop="14628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG : CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG : ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG : GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG : GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG : GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG : CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG : GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA : GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG : CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG : ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG : GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT : GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG : TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG : ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA : TCCTATAAGAAAAAGAAAATCTGTCGAGGGTCA</gDNA_template>
            <first_frame> K  N  E  K  T  P  *  R  I  I  S  Q  A  F  F  I  L  A  P  F  D  V  P  Q  L  R  H  C  P  L  P  Y  Q  *  S  I  I  Q  I  A  I  S  S  S  S  L  S  S  S  S  S  S  S  A  I  S  L  F  L  F  G  H  T  T  L  G  G  Y  H  *  M  *  F  E  K  K  K  N  Y  I  Y  T  Y  W  E  S  C  I  V  I  Q  L  A  S  T  L  L  L  L  L  L  H  Y  *  E  H  L  L  L  L  Q  G  R  L  L  Q  L  L  L  L  L  T  R  L  V  V  L  V  L  L  L  V  I  S  S  V  I  H  Q  R  F  G  L  C  V  A  L  C  R  G  G  V  T  V  L  I  G  S  L  R  S  V  L  L  L  R  S  G  L  L  P  L  L  S  T  G  F  I  G  N  *  L  P  W  :  L  Q  R  T  H  L  R  E  S  S  L  V  F  Q  S  P  E  V  V  N  S  E  S  S  I  A  Y  L  R  S  M  I  P  G  L  :  T  S  Y  H  T  L  S  E  F  F  S  N  Q  Q  S  V  I  V  T  T  F  K  *  K  R  K  M  L  R  R  L  L  T  G  K  I  L  H  L  S  L  W  R  Y  P  S  S  L  P  V  S  C  C  R :   I  L  L  V  Y  Q  L  W  W  T  L  L  A  C  V  M  P  *  T  T  L  A  V  I  L  T  R  L  I  H  W :   F  L  S  T  *  L  L  I  T  Q  F  K  L  M  *  Q  G  Q  K  M  Q  S  R  L  I  W  S  L  N  S  K  G  I  R  R  D  L  P  S  L  S  G  D  P  M  L  S  K  T  C  L  L  F  H  L  G  L  V  L  C  I  R :   *  I  L  N  I  L  E  G  L  C  S  I  G  K  A  C  S  T  Q  I  A  W  S  E  Q  I  P  T  P  L  *  L  M  G  *  E  L  L  A  G  V  S  E  V  L  R  Q  K  L  Q  C  L  A  S :   Q  *  A  W  C  C  L  E  L  S  G  S  S  Y  Q  G  I  C  E  M  V  *  L  P  L  T  W  F  *  L  S  L  K  C  *  G  S  M  V  L  L  E  S  L  L  N  S  M  :  V  R  E  *  V  V  F  H  W  L  T  G  P  P  L  Q  T  W  L  L  N  M  V  Q  Q  W  V  S  S  L  *  I  M  L  L  C  N  T  S  S  *  Q  G  E  V  M  K  Q :   L  E  W  *  S  H  I  S  V  Q  I  I  C  L  S  I  I  K  S :   L  N  K  K  R  C  T  L  L  I  *  T  *  T  L  P  M  L  N  H  V  C  Q  G  Q  R   : D  L  M  T  V  C  L  *  K  K  *  S  L  T  G  M  L  A  *  I  T  K  L  D  S  R :   D  L  L  C  Q  K  R  C  K  I  K  W  P  S  F  P  S  M  G  N  L  Q  S  S  N  M  A  V  L  *  L  L  L  S  Q  V  A  Q  I  H  P  I  P  V  L  C  *  E  Q  L  W  L  P  K  R  H  L  S  W  V  Y  M :   L  S  H  G  L  K  L  A  L  P  Q  A  L  V  L  L  Q  N  I  Y  S  R   : V  V  Y  R  S  I  *  I  S  K  V  S  T  L  L  A  M  A  A  P  L  V  *  G  T  L  G  T  W  M  N  L  L  L  L  P  Y  Q  R  T  :  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   E  L  K  L  *  L  L  R  A  S  R  G  F  I  A  V  T  W  *  E  W  V  L  C  L  Y  V  L  R  L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F   : I  L  *  E  K  E  N  L  S  R  V  </first_frame>
            <second_frame>  K  T  K  K  H  H  N  A  *  L  A  K  L  F  L  F  *  L  H  L  M  C  R  S  F  G  T  V  L  Y  H  I  S  N  Q  *  F  K  S  P  Y  L  L  R  H  Y  L  H  L  L  P  H  Q  Q  F  P  F  F  C  L  G  T  Q  P  *  E  V  T  I  E  C  D  L  R  K  K  K  T  I  Y  I  H  I  G  S  H  V  *  *  Y  S  S  Q  V  L  F  F  C  C  F  F  I  I  E  S  I  F  F  C  Y  K  A  A  C  F  N  F  Y  C  C  S  R  A  L  S  C  W  C  C  F  W  *  S  A  A  L  F  I  N  A  S  V  S  A  L  L  C  A  E  V  E  S  R  C  *  L  E  V  S  D  Q  S  Y  C  S  D  Q  D  C  C  P  C  S  Q  R  V  S  S  E  T  S  Y  H  G :   C  R  E  P  I  *  G  N  P  H  W  S  S  K  A  R  R  W  *  I  R  K  V  L  *  L  T  C  A  Q  *  S  Q  D  * :   Q  A  T  I  L  Y  Q  N  S  S  R  I  S  N  P  *  L  *  Q  L  S  S  E  K  G  R  C  *  E  D  Y  *  L  G  K  F  C  T  *  A  C  G  D  T  L  Q  A  C  P  C  L  A  A   : G  F  Y  W  C  T  S  C  G  G  P  C  L  H  A  *  C  H  E  Q  P  W  Q  *  F  *  Q  D  *  S  I   : G  S  C  R  P  S  Y  *  S  L  S  S  S  *  C  N  K  V  R  K  C  S  P  G  *  Y  G  A  *  I  P  K  E  *  G  E  I  C  L  P  *  V  G  I  Q  C  F  P  K  H  A  C  C  S  T  W  V  W  Y  C  A  S   : G  E  S  *  I  S  W  K  G  C  V  Q  *  G  R  L  A  L  P  R  *  R  G  R  N  R  F  P  H  H  Y  D  *  W  V  R  S  C  W  L  G  C  R  R  Y  *  G  R  S  C  N  A  W  P   : A  N  E  H  G  V  A  W  S  C  R  V  Q  A  I  R  E  F  A  K  W  C  N  C  H  *  L  G  S  D  C  H  S  N  A  E  E  A  W  C  C  W  K  V  C  *  I  L  W :   *  G  N  E  W  S  F  I  G  *  Q  G  H  H  C  K  H  G  S  *  I  W  C  N  N  G  F  L  P  C  R  S  C  Y  F  A  I  P  Q  V  N  R  E  K  *  *  N   : S  W  N  G  R  V  I  S  P  C  K  *  Y  V  C  R  L  *  R   : A  S  T  R  K  G  V  L  F  L  F  E  L  R  P  C  R  C  *  T  M  S  V  R  A  K  E  :  T  S  *  P  C  A  F  E  R  N  E  V  *  L  A  C  L  P  R  *  Q  S  W  I  Q   : G  I  C  C  A  K  R  G  A  R  *  S  G  Q  V  F  L  P  W  A  T  C  R  A  Q  T  W  Q  C  C  D  C  C  Y  H  K  L  H  K  Y  I  Q  S  Q  C  Y  A  R  S  S  S  G  C  Q  K  G  I  *  A  G  S  T   : C  *  A  M  G  *  N  *  P  C  P  R  L  W  C  C  Y  K  I  F  T  Q  E  :  W  S  T  E  V  F  K  S  A  R  F  Q  H  C  W  L  W  L  H  H  L  Y  R  E  L  W  G  L  G  *  I  C  C  F  C  H  I  R  E  R :   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  S  *  S  C  N  C  *  E  L  R  E  D  S  S  Q  *  L  G  R  N  G  Y  C  A  S  M  F  *  G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S  :  S  Y  K  K  K  K  I  C  R  G  S </second_frame>
            <third_frame>   K  R  K  N  T  I  T  H  N  *  P  S  F  F  Y  F  S  S  I  *  C  A  A  A  S  A  L  S  F  T  I  S  V  I  N  N  S  N  R  H  I  F  F  V  T  I  F  I  F  F  L  I  S  N  F  P  F  F  V  W  A  H  N  P  R  R  L  P  L  N  V  I  *  E  K  K  K  L  Y  I  Y  I  L  G  V  M  Y  S  N  T  A  R  K  Y  S  S  S  A  A  S  S  L  L  R  A  S  S  S  V  T  R  P  L  A  S  T  S  T  A  A  H  A  P  C  R  A  G  A  A  S  G  N  Q  Q  R  Y  S  S  T  L  R  S  L  R  C  S  V  P  R  W  S  H  G  V  D  W  K  S  P  I  S  L  T  A  Q  I  R  T  A  A  P  A  L  N  G  F  H  R  K  L  A  T  M   : A  A  E  N  P  F  K  G  I  L  T  G  L  P  K  P  G  G  G  E  F  G  K  F  Y  S  L  P  A  L  N  D  P  R  I   : D  K  L  P  Y  S  I  R  I  L  L  E  S  A  I  R  N  C  D  N  F  Q  V  K  K  E  D  V  E  K  I  I  D  W  E  N  S  A  P  K  L  V  E  I  P  F  K  P  A  R  V  L  L  Q  :  D  F  T  G  V  P  A  V  V  D  L  A  C  M  R  D  A  M  N  N  L  G  S  D  S  D  K  I  N  P  L  :  V  P  V  D  L  V  I  D  H  S  V  Q  V  D  V  T  R  S  E  N  A  V  Q  A  N  M  E  L  E  F  Q  R  N  K  E  R  F  A  F  L  K  W  G  S  N  A  F  Q  N  M  L  V  V  P  P  G  S  G  I  V  H  Q  :  V  N  L  E  Y  L  G  R  V  V  F  N  R  E  G  L  L  Y  P  D  S  V  V  G  T  D  S  H  T  T  M  I  D  G  L  G  V  A  G  W  G  V  G  G  I  E  A  E  A  A  M  L  G  Q  :  P  M  S  M  V  L  P  G  V  V  G  F  K  L  S  G  N  L  R  N  G  V  T  A  T  D  L  V  L  T  V  T  Q  M  L  R  K  H  G  V  V  G  K  F  V  E  F  Y   : G  E  G  M  S  G  L  S  L  A  D  R  A  T  I  A  N  M  A  P  E  Y  G  A  T  M  G  F  F  P  V  D  H  V  T  L  Q  Y  L  K  L  T  G  R  S  D  E  T  :  V  G  M  V  E  S  Y  L  R  A  N  N  M  F  V  D  Y  K  E  :  P  Q  Q  E  K  V  Y  S  S  Y  L  N  L  D  L  A  D  V  E  P  C  L  S  G  P  K  R :   P  H  D  R  V  P  L  K  E  M  K  S  D  W  H  A  C  L  D  N  K  V  G  F  K  :  G  F  A  V  P  K  E  V  Q  D  K  V  A  K  F  S  F  H  G  Q  P  A  E  L  K  H  G  S  V  V  I  A  A  I  T  S  C  T  N  T  S  N  P  S  V  M  L  G  A  A  L  V  A  K  K  A  S  E  L  G  L  H  :  V  K  P  W  V  K  T  S  L  A  P  G  S  G  V  V  T  K  Y  L  L  K  S :   G  L  Q  K  Y  L  N  Q  Q  G  F  N  I  V  G  Y  G  C  T  T  C  I  G  N  S  G  D  L  D  E  S  V  A  S  A  I  S  E  N   : D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  G  V  K  A  V  I  A  K  S  F  E  R  I  H  R  S  N  L  V  G  M  G  I  V  P  L  C  F  K  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L  H :   P  I  R  K  R  K  S  V  E  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23032" stop="22702"/>
                    <exon start="22286" stop="22182"/>
                    <exon start="22091" stop="21931"/>
                    <exon start="21840" stop="21748"/>
                    <exon start="21521" stop="21336"/>
                    <exon start="21117" stop="20956"/>
                    <exon start="20023" stop="19879"/>
                    <exon start="19778" stop="19636"/>
                    <exon start="19545" stop="19489"/>
                    <exon start="19397" stop="19318"/>
                    <exon start="19230" stop="19155"/>
                    <exon start="19011" stop="18826"/>
                    <exon start="18740" stop="18673"/>
                    <exon start="18577" stop="18459"/>
                    <exon start="18348" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16493" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>3021</number_coding_nucleotides>
                  <number_encoded_amino_acids>1007</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKKLYIYILGVMYSNTARKYSSSAASSLLRASSSVTRPLASTSTAAHAPCRAGAASGNQQRYSSTLRSLRCSVPRWSHGVDWKSPISLTAQIRTAAPALNGFHRKLATMAAENPFKGILTGLPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKLVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGSDSDKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNREGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGNLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSGLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVGMVESYLRANNMFVDYKEPQQEKVYSSYLNLDLADVEPCLSGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAVPKEVQDKVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
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        </AGS_line>
        <SCR_line>
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          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="0.990"/>
          <exon-intron don_prob="0.008" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.812" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.392" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.889"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
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          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.991">
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          <intron i_serial="2" don_prob="0.997" acc_prob="0.978">
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18978" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18946" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18926" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18852" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18678" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18540" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18518" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18516" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18310" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18256" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18244" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17466" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17449" stop="17369"/>
              <exon start="17290" stop="16815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17444" stop="17369"/>
              <exon start="17290" stop="16883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17441" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17425" stop="17369"/>
              <exon start="17290" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17422" stop="17369"/>
              <exon start="17290" stop="16928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17387" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485483" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16811"/>
              <exon start="16687" stop="16637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17192" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17144" stop="16811"/>
              <exon start="16687" stop="16636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17135" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17047" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16982" stop="16811"/>
              <exon start="16687" stop="16650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16951" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16927" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16917" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585628" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16905" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16839" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539494" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16644" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14636" stop="14628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16592" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16428" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14636" stop="14628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16428" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16390" stop="16251"/>
              <exon start="15183" stop="15057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16356" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247229" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG : CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG : ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG : GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG : GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG : GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG : CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG : GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA : GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG : CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG : ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG : GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT : GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG : TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG : ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA : AAAAAGAAA</gDNA_template>
            <first_frame> K  N  E  K  T  P  *  R  I  I  S  Q  A  F  F  I  L  A  P  F  D  V  P  Q  L  R  H  C  P  L  P  Y  Q  *  S  I  I  Q  I  A  I  S  S  S  S  L  S  S  S  S  S  S  S  A  I  S  L  F  L  F  G  H  T  T  L  G  G  Y  H  *  M  *  F  E  K  K  K  N  Y  I  Y  T  Y  W  E  S  C  I  V  I  Q  L  A  S  T  L  L  L  L  L  L  H  Y  *  E  H  L  L  L  L  Q  G  R  L  L  Q  L  L  L  L  L  T  R  L  V  V  L  V  L  L  L  V  I  S  S  V  I  H  Q  R  F  G  L  C  V  A  L  C  R  G  G  V  T  V  L  I  G  S  L  R  S  V  L  L  L  R  S  G  L  L  P  L  L  S  T  G  F  I  G  N  *  L  P  W  :  L  Q  R  T  H  L  R  E  S  S  L  V  F  Q  S  P  E  V  V  N  S  E  S  S  I  A  Y  L  R  S  M  I  P  G  L  :  T  S  Y  H  T  L  S  E  F  F  S  N  Q  Q  S  V  I  V  T  T  F  K  *  K  R  K  M  L  R  R  L  L  T  G  K  I  L  H  L  S  L  W  R  Y  P  S  S  L  P  V  S  C  C  R :   I  L  L  V  Y  Q  L  W  W  T  L  L  A  C  V  M  P  *  T  T  L  A  V  I  L  T  R  L  I  H  W :   F  L  S  T  *  L  L  I  T  Q  F  K  L  M  *  Q  G  Q  K  M  Q  S  R  L  I  W  S  L  N  S  K  G  I  R  R  D  L  P  S  L  S  G  D  P  M  L  S  K  T  C  L  L  F  H  L  G  L  V  L  C  I  R :   *  I  L  N  I  L  E  G  L  C  S  I  G  K  A  C  S  T  Q  I  A  W  S  E  Q  I  P  T  P  L  *  L  M  G  *  E  L  L  A  G  V  S  E  V  L  R  Q  K  L  Q  C  L  A  S :   Q  *  A  W  C  C  L  E  L  S  G  S  S  Y  Q  G  I  C  E  M  V  *  L  P  L  T  W  F  *  L  S  L  K  C  *  G  S  M  V  L  L  E  S  L  L  N  S  M  :  V  R  E  *  V  V  F  H  W  L  T  G  P  P  L  Q  T  W  L  L  N  M  V  Q  Q  W  V  S  S  L  *  I  M  L  L  C  N  T  S  S  *  Q  G  E  V  M  K  Q :   L  E  W  *  S  H  I  S  V  Q  I  I  C  L  S  I  I  K  S :   L  N  K  K  R  C  T  L  L  I  *  T  *  T  L  P  M  L  N  H  V  C  Q  G  Q  R   : D  L  M  T  V  C  L  *  K  K  *  S  L  T  G  M  L  A  *  I  T  K  L  D  S  R :   D  L  L  C  Q  K  R  C  K  I  K  W  P  S  F  P  S  M  G  N  L  Q  S  S  N  M  A  V  L  *  L  L  L  S  Q  V  A  Q  I  H  P  I  P  V  L  C  *  E  Q  L  W  L  P  K  R  H  L  S  W  V  Y  M :   L  S  H  G  L  K  L  A  L  P  Q  A  L  V  L  L  Q  N  I  Y  S  R   : V  V  Y  R  S  I  *  I  S  K  V  S  T  L  L  A  M  A  A  P  L  V  *  G  T  L  G  T  W  M  N  L  L  L  L  P  Y  Q  R  T  :  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   E  L  K  L  *  L  L  R  A  S  R  G  F  I  A  V  T  W  *  E  W  V  L  C  L  Y  V  L  R  L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F   : K  K  E  </first_frame>
            <second_frame>  K  T  K  K  H  H  N  A  *  L  A  K  L  F  L  F  *  L  H  L  M  C  R  S  F  G  T  V  L  Y  H  I  S  N  Q  *  F  K  S  P  Y  L  L  R  H  Y  L  H  L  L  P  H  Q  Q  F  P  F  F  C  L  G  T  Q  P  *  E  V  T  I  E  C  D  L  R  K  K  K  T  I  Y  I  H  I  G  S  H  V  *  *  Y  S  S  Q  V  L  F  F  C  C  F  F  I  I  E  S  I  F  F  C  Y  K  A  A  C  F  N  F  Y  C  C  S  R  A  L  S  C  W  C  C  F  W  *  S  A  A  L  F  I  N  A  S  V  S  A  L  L  C  A  E  V  E  S  R  C  *  L  E  V  S  D  Q  S  Y  C  S  D  Q  D  C  C  P  C  S  Q  R  V  S  S  E  T  S  Y  H  G :   C  R  E  P  I  *  G  N  P  H  W  S  S  K  A  R  R  W  *  I  R  K  V  L  *  L  T  C  A  Q  *  S  Q  D  * :   Q  A  T  I  L  Y  Q  N  S  S  R  I  S  N  P  *  L  *  Q  L  S  S  E  K  G  R  C  *  E  D  Y  *  L  G  K  F  C  T  *  A  C  G  D  T  L  Q  A  C  P  C  L  A  A   : G  F  Y  W  C  T  S  C  G  G  P  C  L  H  A  *  C  H  E  Q  P  W  Q  *  F  *  Q  D  *  S  I   : G  S  C  R  P  S  Y  *  S  L  S  S  S  *  C  N  K  V  R  K  C  S  P  G  *  Y  G  A  *  I  P  K  E  *  G  E  I  C  L  P  *  V  G  I  Q  C  F  P  K  H  A  C  C  S  T  W  V  W  Y  C  A  S   : G  E  S  *  I  S  W  K  G  C  V  Q  *  G  R  L  A  L  P  R  *  R  G  R  N  R  F  P  H  H  Y  D  *  W  V  R  S  C  W  L  G  C  R  R  Y  *  G  R  S  C  N  A  W  P   : A  N  E  H  G  V  A  W  S  C  R  V  Q  A  I  R  E  F  A  K  W  C  N  C  H  *  L  G  S  D  C  H  S  N  A  E  E  A  W  C  C  W  K  V  C  *  I  L  W :   *  G  N  E  W  S  F  I  G  *  Q  G  H  H  C  K  H  G  S  *  I  W  C  N  N  G  F  L  P  C  R  S  C  Y  F  A  I  P  Q  V  N  R  E  K  *  *  N   : S  W  N  G  R  V  I  S  P  C  K  *  Y  V  C  R  L  *  R   : A  S  T  R  K  G  V  L  F  L  F  E  L  R  P  C  R  C  *  T  M  S  V  R  A  K  E  :  T  S  *  P  C  A  F  E  R  N  E  V  *  L  A  C  L  P  R  *  Q  S  W  I  Q   : G  I  C  C  A  K  R  G  A  R  *  S  G  Q  V  F  L  P  W  A  T  C  R  A  Q  T  W  Q  C  C  D  C  C  Y  H  K  L  H  K  Y  I  Q  S  Q  C  Y  A  R  S  S  S  G  C  Q  K  G  I  *  A  G  S  T   : C  *  A  M  G  *  N  *  P  C  P  R  L  W  C  C  Y  K  I  F  T  Q  E  :  W  S  T  E  V  F  K  S  A  R  F  Q  H  C  W  L  W  L  H  H  L  Y  R  E  L  W  G  L  G  *  I  C  C  F  C  H  I  R  E  R :   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  S  *  S  C  N  C  *  E  L  R  E  D  S  S  Q  *  L  G  R  N  G  Y  C  A  S  M  F  *  G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S  :  K  K  K </second_frame>
            <third_frame>   K  R  K  N  T  I  T  H  N  *  P  S  F  F  Y  F  S  S  I  *  C  A  A  A  S  A  L  S  F  T  I  S  V  I  N  N  S  N  R  H  I  F  F  V  T  I  F  I  F  F  L  I  S  N  F  P  F  F  V  W  A  H  N  P  R  R  L  P  L  N  V  I  *  E  K  K  K  L  Y  I  Y  I  L  G  V  M  Y  S  N  T  A  R  K  Y  S  S  S  A  A  S  S  L  L  R  A  S  S  S  V  T  R  P  L  A  S  T  S  T  A  A  H  A  P  C  R  A  G  A  A  S  G  N  Q  Q  R  Y  S  S  T  L  R  S  L  R  C  S  V  P  R  W  S  H  G  V  D  W  K  S  P  I  S  L  T  A  Q  I  R  T  A  A  P  A  L  N  G  F  H  R  K  L  A  T  M   : A  A  E  N  P  F  K  G  I  L  T  G  L  P  K  P  G  G  G  E  F  G  K  F  Y  S  L  P  A  L  N  D  P  R  I   : D  K  L  P  Y  S  I  R  I  L  L  E  S  A  I  R  N  C  D  N  F  Q  V  K  K  E  D  V  E  K  I  I  D  W  E  N  S  A  P  K  L  V  E  I  P  F  K  P  A  R  V  L  L  Q  :  D  F  T  G  V  P  A  V  V  D  L  A  C  M  R  D  A  M  N  N  L  G  S  D  S  D  K  I  N  P  L  :  V  P  V  D  L  V  I  D  H  S  V  Q  V  D  V  T  R  S  E  N  A  V  Q  A  N  M  E  L  E  F  Q  R  N  K  E  R  F  A  F  L  K  W  G  S  N  A  F  Q  N  M  L  V  V  P  P  G  S  G  I  V  H  Q  :  V  N  L  E  Y  L  G  R  V  V  F  N  R  E  G  L  L  Y  P  D  S  V  V  G  T  D  S  H  T  T  M  I  D  G  L  G  V  A  G  W  G  V  G  G  I  E  A  E  A  A  M  L  G  Q  :  P  M  S  M  V  L  P  G  V  V  G  F  K  L  S  G  N  L  R  N  G  V  T  A  T  D  L  V  L  T  V  T  Q  M  L  R  K  H  G  V  V  G  K  F  V  E  F  Y   : G  E  G  M  S  G  L  S  L  A  D  R  A  T  I  A  N  M  A  P  E  Y  G  A  T  M  G  F  F  P  V  D  H  V  T  L  Q  Y  L  K  L  T  G  R  S  D  E  T  :  V  G  M  V  E  S  Y  L  R  A  N  N  M  F  V  D  Y  K  E  :  P  Q  Q  E  K  V  Y  S  S  Y  L  N  L  D  L  A  D  V  E  P  C  L  S  G  P  K  R :   P  H  D  R  V  P  L  K  E  M  K  S  D  W  H  A  C  L  D  N  K  V  G  F  K  :  G  F  A  V  P  K  E  V  Q  D  K  V  A  K  F  S  F  H  G  Q  P  A  E  L  K  H  G  S  V  V  I  A  A  I  T  S  C  T  N  T  S  N  P  S  V  M  L  G  A  A  L  V  A  K  K  A  S  E  L  G  L  H  :  V  K  P  W  V  K  T  S  L  A  P  G  S  G  V  V  T  K  Y  L  L  K  S :   G  L  Q  K  Y  L  N  Q  Q  G  F  N  I  V  G  Y  G  C  T  T  C  I  G  N  S  G  D  L  D  E  S  V  A  S  A  I  S  E  N   : D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  G  V  K  A  V  I  A  K  S  F  E  R  I  H  R  S  N  L  V  G  M  G  I  V  P  L  C  F  K  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L  Q :   K  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23032" stop="22702"/>
                    <exon start="22286" stop="22182"/>
                    <exon start="22091" stop="21931"/>
                    <exon start="21840" stop="21748"/>
                    <exon start="21521" stop="21336"/>
                    <exon start="21117" stop="20956"/>
                    <exon start="20023" stop="19879"/>
                    <exon start="19778" stop="19636"/>
                    <exon start="19545" stop="19489"/>
                    <exon start="19397" stop="19318"/>
                    <exon start="19230" stop="19155"/>
                    <exon start="19011" stop="18826"/>
                    <exon start="18740" stop="18673"/>
                    <exon start="18577" stop="18459"/>
                    <exon start="18348" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16493" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>3021</number_coding_nucleotides>
                  <number_encoded_amino_acids>1007</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKKLYIYILGVMYSNTARKYSSSAASSLLRASSSVTRPLASTSTAAHAPCRAGAASGNQQRYSSTLRSLRCSVPRWSHGVDWKSPISLTAQIRTAAPALNGFHRKLATMAAENPFKGILTGLPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKLVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGSDSDKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNREGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGNLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSGLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVGMVESYLRANNMFVDYKEPQQEKVYSSYLNLDLADVEPCLSGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAVPKEVQDKVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
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            <exon e_start="15183" e_stop="14850"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
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          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="0.990"/>
          <exon-intron don_prob="0.008" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.812" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.392" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
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          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.991">
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          </intron>
          <exon e_serial="2" e_score="0.990">
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          <intron i_serial="2" don_prob="0.997" acc_prob="0.978">
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          </intron>
          <exon e_serial="3" e_score="1.000">
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          <intron i_serial="3" don_prob="0.008" acc_prob="0.999">
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          </intron>
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          <intron i_serial="7" don_prob="0.882" acc_prob="0.999">
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        </exon-intron_info>
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              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18926" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18852" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18678" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18540" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18518" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18516" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18310" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18256" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18244" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17466" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17449" stop="17369"/>
              <exon start="17290" stop="16815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17444" stop="17369"/>
              <exon start="17290" stop="16883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17441" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17425" stop="17369"/>
              <exon start="17290" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17422" stop="17369"/>
              <exon start="17290" stop="16928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17387" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485483" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16811"/>
              <exon start="16687" stop="16637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17192" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17144" stop="16811"/>
              <exon start="16687" stop="16636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17135" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17047" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16982" stop="16811"/>
              <exon start="16687" stop="16650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16951" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16942" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16927" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16917" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585628" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16905" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16839" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539494" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16592" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16428" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16416" stop="16251"/>
              <exon start="15183" stop="14852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16390" stop="16251"/>
              <exon start="15183" stop="15057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16356" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247229" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG : CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG : ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG : GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG : GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG : GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG : CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG : GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA : GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG : CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG : ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG : GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT : GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG : TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG : ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCAGCAAG</gDNA_template>
            <first_frame> K  N  E  K  T  P  *  R  I  I  S  Q  A  F  F  I  L  A  P  F  D  V  P  Q  L  R  H  C  P  L  P  Y  Q  *  S  I  I  Q  I  A  I  S  S  S  S  L  S  S  S  S  S  S  S  A  I  S  L  F  L  F  G  H  T  T  L  G  G  Y  H  *  M  *  F  E  K  K  K  N  Y  I  Y  T  Y  W  E  S  C  I  V  I  Q  L  A  S  T  L  L  L  L  L  L  H  Y  *  E  H  L  L  L  L  Q  G  R  L  L  Q  L  L  L  L  L  T  R  L  V  V  L  V  L  L  L  V  I  S  S  V  I  H  Q  R  F  G  L  C  V  A  L  C  R  G  G  V  T  V  L  I  G  S  L  R  S  V  L  L  L  R  S  G  L  L  P  L  L  S  T  G  F  I  G  N  *  L  P  W  :  L  Q  R  T  H  L  R  E  S  S  L  V  F  Q  S  P  E  V  V  N  S  E  S  S  I  A  Y  L  R  S  M  I  P  G  L  :  T  S  Y  H  T  L  S  E  F  F  S  N  Q  Q  S  V  I  V  T  T  F  K  *  K  R  K  M  L  R  R  L  L  T  G  K  I  L  H  L  S  L  W  R  Y  P  S  S  L  P  V  S  C  C  R :   I  L  L  V  Y  Q  L  W  W  T  L  L  A  C  V  M  P  *  T  T  L  A  V  I  L  T  R  L  I  H  W :   F  L  S  T  *  L  L  I  T  Q  F  K  L  M  *  Q  G  Q  K  M  Q  S  R  L  I  W  S  L  N  S  K  G  I  R  R  D  L  P  S  L  S  G  D  P  M  L  S  K  T  C  L  L  F  H  L  G  L  V  L  C  I  R :   *  I  L  N  I  L  E  G  L  C  S  I  G  K  A  C  S  T  Q  I  A  W  S  E  Q  I  P  T  P  L  *  L  M  G  *  E  L  L  A  G  V  S  E  V  L  R  Q  K  L  Q  C  L  A  S :   Q  *  A  W  C  C  L  E  L  S  G  S  S  Y  Q  G  I  C  E  M  V  *  L  P  L  T  W  F  *  L  S  L  K  C  *  G  S  M  V  L  L  E  S  L  L  N  S  M  :  V  R  E  *  V  V  F  H  W  L  T  G  P  P  L  Q  T  W  L  L  N  M  V  Q  Q  W  V  S  S  L  *  I  M  L  L  C  N  T  S  S  *  Q  G  E  V  M  K  Q :   L  E  W  *  S  H  I  S  V  Q  I  I  C  L  S  I  I  K  S :   L  N  K  K  R  C  T  L  L  I  *  T  *  T  L  P  M  L  N  H  V  C  Q  G  Q  R   : D  L  M  T  V  C  L  *  K  K  *  S  L  T  G  M  L  A  *  I  T  K  L  D  S  R :   D  L  L  C  Q  K  R  C  K  I  K  W  P  S  F  P  S  M  G  N  L  Q  S  S  N  M  A  V  L  *  L  L  L  S  Q  V  A  Q  I  H  P  I  P  V  L  C  *  E  Q  L  W  L  P  K  R  H  L  S  W  V  Y  M :   L  S  H  G  L  K  L  A  L  P  Q  A  L  V  L  L  Q  N  I  Y  S  R   : V  V  Y  R  S  I  *  I  S  K  V  S  T  L  L  A  M  A  A  P  L  V  *  G  T  L  G  T  W  M  N  L  L  L  L  P  Y  Q  R  T  :  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   E  L  K  L  *  L  L  R  A  S  R  G  F  I  A  V  T  W  *  E  W  V  L  C  L  Y  V  L  R  L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F  S  K </first_frame>
            <second_frame>  K  T  K  K  H  H  N  A  *  L  A  K  L  F  L  F  *  L  H  L  M  C  R  S  F  G  T  V  L  Y  H  I  S  N  Q  *  F  K  S  P  Y  L  L  R  H  Y  L  H  L  L  P  H  Q  Q  F  P  F  F  C  L  G  T  Q  P  *  E  V  T  I  E  C  D  L  R  K  K  K  T  I  Y  I  H  I  G  S  H  V  *  *  Y  S  S  Q  V  L  F  F  C  C  F  F  I  I  E  S  I  F  F  C  Y  K  A  A  C  F  N  F  Y  C  C  S  R  A  L  S  C  W  C  C  F  W  *  S  A  A  L  F  I  N  A  S  V  S  A  L  L  C  A  E  V  E  S  R  C  *  L  E  V  S  D  Q  S  Y  C  S  D  Q  D  C  C  P  C  S  Q  R  V  S  S  E  T  S  Y  H  G :   C  R  E  P  I  *  G  N  P  H  W  S  S  K  A  R  R  W  *  I  R  K  V  L  *  L  T  C  A  Q  *  S  Q  D  * :   Q  A  T  I  L  Y  Q  N  S  S  R  I  S  N  P  *  L  *  Q  L  S  S  E  K  G  R  C  *  E  D  Y  *  L  G  K  F  C  T  *  A  C  G  D  T  L  Q  A  C  P  C  L  A  A   : G  F  Y  W  C  T  S  C  G  G  P  C  L  H  A  *  C  H  E  Q  P  W  Q  *  F  *  Q  D  *  S  I   : G  S  C  R  P  S  Y  *  S  L  S  S  S  *  C  N  K  V  R  K  C  S  P  G  *  Y  G  A  *  I  P  K  E  *  G  E  I  C  L  P  *  V  G  I  Q  C  F  P  K  H  A  C  C  S  T  W  V  W  Y  C  A  S   : G  E  S  *  I  S  W  K  G  C  V  Q  *  G  R  L  A  L  P  R  *  R  G  R  N  R  F  P  H  H  Y  D  *  W  V  R  S  C  W  L  G  C  R  R  Y  *  G  R  S  C  N  A  W  P   : A  N  E  H  G  V  A  W  S  C  R  V  Q  A  I  R  E  F  A  K  W  C  N  C  H  *  L  G  S  D  C  H  S  N  A  E  E  A  W  C  C  W  K  V  C  *  I  L  W :   *  G  N  E  W  S  F  I  G  *  Q  G  H  H  C  K  H  G  S  *  I  W  C  N  N  G  F  L  P  C  R  S  C  Y  F  A  I  P  Q  V  N  R  E  K  *  *  N   : S  W  N  G  R  V  I  S  P  C  K  *  Y  V  C  R  L  *  R   : A  S  T  R  K  G  V  L  F  L  F  E  L  R  P  C  R  C  *  T  M  S  V  R  A  K  E  :  T  S  *  P  C  A  F  E  R  N  E  V  *  L  A  C  L  P  R  *  Q  S  W  I  Q   : G  I  C  C  A  K  R  G  A  R  *  S  G  Q  V  F  L  P  W  A  T  C  R  A  Q  T  W  Q  C  C  D  C  C  Y  H  K  L  H  K  Y  I  Q  S  Q  C  Y  A  R  S  S  S  G  C  Q  K  G  I  *  A  G  S  T   : C  *  A  M  G  *  N  *  P  C  P  R  L  W  C  C  Y  K  I  F  T  Q  E  :  W  S  T  E  V  F  K  S  A  R  F  Q  H  C  W  L  W  L  H  H  L  Y  R  E  L  W  G  L  G  *  I  C  C  F  C  H  I  R  E  R :   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  S  *  S  C  N  C  *  E  L  R  E  D  S  S  Q  *  L  G  R  N  G  Y  C  A  S  M  F  *  G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S  A   </second_frame>
            <third_frame>   K  R  K  N  T  I  T  H  N  *  P  S  F  F  Y  F  S  S  I  *  C  A  A  A  S  A  L  S  F  T  I  S  V  I  N  N  S  N  R  H  I  F  F  V  T  I  F  I  F  F  L  I  S  N  F  P  F  F  V  W  A  H  N  P  R  R  L  P  L  N  V  I  *  E  K  K  K  L  Y  I  Y  I  L  G  V  M  Y  S  N  T  A  R  K  Y  S  S  S  A  A  S  S  L  L  R  A  S  S  S  V  T  R  P  L  A  S  T  S  T  A  A  H  A  P  C  R  A  G  A  A  S  G  N  Q  Q  R  Y  S  S  T  L  R  S  L  R  C  S  V  P  R  W  S  H  G  V  D  W  K  S  P  I  S  L  T  A  Q  I  R  T  A  A  P  A  L  N  G  F  H  R  K  L  A  T  M   : A  A  E  N  P  F  K  G  I  L  T  G  L  P  K  P  G  G  G  E  F  G  K  F  Y  S  L  P  A  L  N  D  P  R  I   : D  K  L  P  Y  S  I  R  I  L  L  E  S  A  I  R  N  C  D  N  F  Q  V  K  K  E  D  V  E  K  I  I  D  W  E  N  S  A  P  K  L  V  E  I  P  F  K  P  A  R  V  L  L  Q  :  D  F  T  G  V  P  A  V  V  D  L  A  C  M  R  D  A  M  N  N  L  G  S  D  S  D  K  I  N  P  L  :  V  P  V  D  L  V  I  D  H  S  V  Q  V  D  V  T  R  S  E  N  A  V  Q  A  N  M  E  L  E  F  Q  R  N  K  E  R  F  A  F  L  K  W  G  S  N  A  F  Q  N  M  L  V  V  P  P  G  S  G  I  V  H  Q  :  V  N  L  E  Y  L  G  R  V  V  F  N  R  E  G  L  L  Y  P  D  S  V  V  G  T  D  S  H  T  T  M  I  D  G  L  G  V  A  G  W  G  V  G  G  I  E  A  E  A  A  M  L  G  Q  :  P  M  S  M  V  L  P  G  V  V  G  F  K  L  S  G  N  L  R  N  G  V  T  A  T  D  L  V  L  T  V  T  Q  M  L  R  K  H  G  V  V  G  K  F  V  E  F  Y   : G  E  G  M  S  G  L  S  L  A  D  R  A  T  I  A  N  M  A  P  E  Y  G  A  T  M  G  F  F  P  V  D  H  V  T  L  Q  Y  L  K  L  T  G  R  S  D  E  T  :  V  G  M  V  E  S  Y  L  R  A  N  N  M  F  V  D  Y  K  E  :  P  Q  Q  E  K  V  Y  S  S  Y  L  N  L  D  L  A  D  V  E  P  C  L  S  G  P  K  R :   P  H  D  R  V  P  L  K  E  M  K  S  D  W  H  A  C  L  D  N  K  V  G  F  K  :  G  F  A  V  P  K  E  V  Q  D  K  V  A  K  F  S  F  H  G  Q  P  A  E  L  K  H  G  S  V  V  I  A  A  I  T  S  C  T  N  T  S  N  P  S  V  M  L  G  A  A  L  V  A  K  K  A  S  E  L  G  L  H  :  V  K  P  W  V  K  T  S  L  A  P  G  S  G  V  V  T  K  Y  L  L  K  S :   G  L  Q  K  Y  L  N  Q  Q  G  F  N  I  V  G  Y  G  C  T  T  C  I  G  N  S  G  D  L  D  E  S  V  A  S  A  I  S  E  N   : D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  G  V  K  A  V  I  A  K  S  F  E  R  I  H  R  S  N  L  V  G  M  G  I  V  P  L  C  F  K  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L  Q  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23032" stop="22702"/>
                    <exon start="22286" stop="22182"/>
                    <exon start="22091" stop="21931"/>
                    <exon start="21840" stop="21748"/>
                    <exon start="21521" stop="21336"/>
                    <exon start="21117" stop="20956"/>
                    <exon start="20023" stop="19879"/>
                    <exon start="19778" stop="19636"/>
                    <exon start="19545" stop="19489"/>
                    <exon start="19397" stop="19318"/>
                    <exon start="19230" stop="19155"/>
                    <exon start="19011" stop="18826"/>
                    <exon start="18740" stop="18673"/>
                    <exon start="18577" stop="18459"/>
                    <exon start="18348" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16493" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>3021</number_coding_nucleotides>
                  <number_encoded_amino_acids>1007</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKKLYIYILGVMYSNTARKYSSSAASSLLRASSSVTRPLASTSTAAHAPCRAGAASGNQQRYSSTLRSLRCSVPRWSHGVDWKSPISLTAQIRTAAPALNGFHRKLATMAAENPFKGILTGLPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKLVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGSDSDKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNREGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGNLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSGLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVGMVESYLRANNMFVDYKEPQQEKVYSSYLNLDLADVEPCLSGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAVPKEVQDKVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
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        </AGS_line>
        <SCR_line>
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          <exon-intron don_prob="0.997" acc_prob="0.978" e_score="0.990"/>
          <exon-intron don_prob="0.008" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.812" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.980" e_score="1.000"/>
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          <exon-intron don_prob="0.392" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.914" e_score="0.949"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.611"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
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          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.991">
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          <intron i_serial="2" don_prob="0.997" acc_prob="0.978">
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            <gDNA_exon_coordinates>
              <exon start="18926" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18852" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18678" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18540" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18518" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18516" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18310" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18256" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18244" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17466" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17449" stop="17369"/>
              <exon start="17290" stop="16815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17444" stop="17369"/>
              <exon start="17290" stop="16883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17441" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17425" stop="17369"/>
              <exon start="17290" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17422" stop="17369"/>
              <exon start="17290" stop="16928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16811"/>
              <exon start="16687" stop="16637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17144" stop="16811"/>
              <exon start="16687" stop="16636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17068" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16406" stop="16290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289336" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16982" stop="16811"/>
              <exon start="16687" stop="16650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16390" stop="16251"/>
              <exon start="15183" stop="15057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14645" stop="14634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16356" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247229" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15151" stop="14855"/>
              <exon start="14645" stop="14628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG : CTGCAGAGAACCCATTTAAGGGAATCCTCACTGGTCTTCCAAAGCCCGGAGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCGCTCAATGATCCCAGGATTG : ACAAGCTACCATACTCTATCAGAATTCTTCTCGAATCAGCAATCCGTAATTGTGACAACTTTCAAGTGAAAAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAATTCTGCACCTAAGCTTGTGGAGATACCCTTCAAGCCTGCCCGTGTCTTGCTGCAG : GATTTTACTGGTGTACCAGCTGTGGTGGACCTTGCTTGCATGCGTGATGCCATGAACAACCTTGGCAGTGATTCTGACAAGATTAATCCATTG : GTTCCTGTCGACCTAGTTATTGATCACTCAGTTCAAGTTGATGTAACAAGGTCAGAAAATGCAGTCCAGGCTAATATGGAGCTTGAATTCCAAAGGAATAAGGAGAGATTTGCCTTCCTTAAGTGGGGATCCAATGCTTTCCAAAACATGCTTGTTGTTCCACCTGGGTCTGGTATTGTGCATCAG : GTGAATCTTGAATATCTTGGAAGGGTTGTGTTCAATAGGGAAGGCTTGCTCTACCCAGATAGCGTGGTCGGAACAGATTCCCACACCACTATGATTGATGGGTTAGGAGTTGCTGGCTGGGGTGTCGGAGGTATTGAGGCAGAAGCTGCAATGCTTGGCCAG : CCAATGAGCATGGTGTTGCCTGGAGTTGTCGGGTTCAAGCTATCAGGGAATTTGCGAAATGGTGTAACTGCCACTGACTTGGTTCTGACTGTCACTCAAATGCTGAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAATTCTATG : GTGAGGGAATGAGTGGTCTTTCATTGGCTGACAGGGCCACCATTGCAAACATGGCTCCTGAATATGGTGCAACAATGGGTTTCTTCCCTGTAGATCATGTTACTTTGCAATACCTCAAGTTAACAGGGAGAAGTGATGAAACA : GTTGGAATGGTAGAGTCATATCTCCGTGCAAATAATATGTTTGTCGATTATAAAGAG : CCTCAACAAGAAAAGGTGTACTCTTCTTATTTGAACTTAGACCTTGCCGATGTTGAACCATGTCTGTCAGGGCCAAAGAG : ACCTCATGACCGTGTGCCTTTGAAAGAAATGAAGTCTGACTGGCATGCTTGCCTAGATAACAAAGTTGGATTCAAG : GGATTTGCTGTGCCAAAAGAGGTGCAAGATAAAGTGGCCAAGTTTTCCTTCCATGGGCAACCTGCAGAGCTCAAACATGGCAGTGTTGTGATTGCTGCTATCACAAGTTGCACAAATACATCCAATCCCAGTGTTATGCTAGGAGCAGCTCTGGTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT : GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG : TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG : ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA : TCCTATAAGAAAAAGAAA</gDNA_template>
            <first_frame> K  N  E  K  T  P  *  R  I  I  S  Q  A  F  F  I  L  A  P  F  D  V  P  Q  L  R  H  C  P  L  P  Y  Q  *  S  I  I  Q  I  A  I  S  S  S  S  L  S  S  S  S  S  S  S  A  I  S  L  F  L  F  G  H  T  T  L  G  G  Y  H  *  M  *  F  E  K  K  K  N  Y  I  Y  T  Y  W  E  S  C  I  V  I  Q  L  A  S  T  L  L  L  L  L  L  H  Y  *  E  H  L  L  L  L  Q  G  R  L  L  Q  L  L  L  L  L  T  R  L  V  V  L  V  L  L  L  V  I  S  S  V  I  H  Q  R  F  G  L  C  V  A  L  C  R  G  G  V  T  V  L  I  G  S  L  R  S  V  L  L  L  R  S  G  L  L  P  L  L  S  T  G  F  I  G  N  *  L  P  W  :  L  Q  R  T  H  L  R  E  S  S  L  V  F  Q  S  P  E  V  V  N  S  E  S  S  I  A  Y  L  R  S  M  I  P  G  L  :  T  S  Y  H  T  L  S  E  F  F  S  N  Q  Q  S  V  I  V  T  T  F  K  *  K  R  K  M  L  R  R  L  L  T  G  K  I  L  H  L  S  L  W  R  Y  P  S  S  L  P  V  S  C  C  R :   I  L  L  V  Y  Q  L  W  W  T  L  L  A  C  V  M  P  *  T  T  L  A  V  I  L  T  R  L  I  H  W :   F  L  S  T  *  L  L  I  T  Q  F  K  L  M  *  Q  G  Q  K  M  Q  S  R  L  I  W  S  L  N  S  K  G  I  R  R  D  L  P  S  L  S  G  D  P  M  L  S  K  T  C  L  L  F  H  L  G  L  V  L  C  I  R :   *  I  L  N  I  L  E  G  L  C  S  I  G  K  A  C  S  T  Q  I  A  W  S  E  Q  I  P  T  P  L  *  L  M  G  *  E  L  L  A  G  V  S  E  V  L  R  Q  K  L  Q  C  L  A  S :   Q  *  A  W  C  C  L  E  L  S  G  S  S  Y  Q  G  I  C  E  M  V  *  L  P  L  T  W  F  *  L  S  L  K  C  *  G  S  M  V  L  L  E  S  L  L  N  S  M  :  V  R  E  *  V  V  F  H  W  L  T  G  P  P  L  Q  T  W  L  L  N  M  V  Q  Q  W  V  S  S  L  *  I  M  L  L  C  N  T  S  S  *  Q  G  E  V  M  K  Q :   L  E  W  *  S  H  I  S  V  Q  I  I  C  L  S  I  I  K  S :   L  N  K  K  R  C  T  L  L  I  *  T  *  T  L  P  M  L  N  H  V  C  Q  G  Q  R   : D  L  M  T  V  C  L  *  K  K  *  S  L  T  G  M  L  A  *  I  T  K  L  D  S  R :   D  L  L  C  Q  K  R  C  K  I  K  W  P  S  F  P  S  M  G  N  L  Q  S  S  N  M  A  V  L  *  L  L  L  S  Q  V  A  Q  I  H  P  I  P  V  L  C  *  E  Q  L  W  L  P  K  R  H  L  S  W  V  Y  M :   L  S  H  G  L  K  L  A  L  P  Q  A  L  V  L  L  Q  N  I  Y  S  R   : V  V  Y  R  S  I  *  I  S  K  V  S  T  L  L  A  M  A  A  P  L  V  *  G  T  L  G  T  W  M  N  L  L  L  L  P  Y  Q  R  T  :  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F   : I  L  *  E  K  E  </first_frame>
            <second_frame>  K  T  K  K  H  H  N  A  *  L  A  K  L  F  L  F  *  L  H  L  M  C  R  S  F  G  T  V  L  Y  H  I  S  N  Q  *  F  K  S  P  Y  L  L  R  H  Y  L  H  L  L  P  H  Q  Q  F  P  F  F  C  L  G  T  Q  P  *  E  V  T  I  E  C  D  L  R  K  K  K  T  I  Y  I  H  I  G  S  H  V  *  *  Y  S  S  Q  V  L  F  F  C  C  F  F  I  I  E  S  I  F  F  C  Y  K  A  A  C  F  N  F  Y  C  C  S  R  A  L  S  C  W  C  C  F  W  *  S  A  A  L  F  I  N  A  S  V  S  A  L  L  C  A  E  V  E  S  R  C  *  L  E  V  S  D  Q  S  Y  C  S  D  Q  D  C  C  P  C  S  Q  R  V  S  S  E  T  S  Y  H  G :   C  R  E  P  I  *  G  N  P  H  W  S  S  K  A  R  R  W  *  I  R  K  V  L  *  L  T  C  A  Q  *  S  Q  D  * :   Q  A  T  I  L  Y  Q  N  S  S  R  I  S  N  P  *  L  *  Q  L  S  S  E  K  G  R  C  *  E  D  Y  *  L  G  K  F  C  T  *  A  C  G  D  T  L  Q  A  C  P  C  L  A  A   : G  F  Y  W  C  T  S  C  G  G  P  C  L  H  A  *  C  H  E  Q  P  W  Q  *  F  *  Q  D  *  S  I   : G  S  C  R  P  S  Y  *  S  L  S  S  S  *  C  N  K  V  R  K  C  S  P  G  *  Y  G  A  *  I  P  K  E  *  G  E  I  C  L  P  *  V  G  I  Q  C  F  P  K  H  A  C  C  S  T  W  V  W  Y  C  A  S   : G  E  S  *  I  S  W  K  G  C  V  Q  *  G  R  L  A  L  P  R  *  R  G  R  N  R  F  P  H  H  Y  D  *  W  V  R  S  C  W  L  G  C  R  R  Y  *  G  R  S  C  N  A  W  P   : A  N  E  H  G  V  A  W  S  C  R  V  Q  A  I  R  E  F  A  K  W  C  N  C  H  *  L  G  S  D  C  H  S  N  A  E  E  A  W  C  C  W  K  V  C  *  I  L  W :   *  G  N  E  W  S  F  I  G  *  Q  G  H  H  C  K  H  G  S  *  I  W  C  N  N  G  F  L  P  C  R  S  C  Y  F  A  I  P  Q  V  N  R  E  K  *  *  N   : S  W  N  G  R  V  I  S  P  C  K  *  Y  V  C  R  L  *  R   : A  S  T  R  K  G  V  L  F  L  F  E  L  R  P  C  R  C  *  T  M  S  V  R  A  K  E  :  T  S  *  P  C  A  F  E  R  N  E  V  *  L  A  C  L  P  R  *  Q  S  W  I  Q   : G  I  C  C  A  K  R  G  A  R  *  S  G  Q  V  F  L  P  W  A  T  C  R  A  Q  T  W  Q  C  C  D  C  C  Y  H  K  L  H  K  Y  I  Q  S  Q  C  Y  A  R  S  S  S  G  C  Q  K  G  I  *  A  G  S  T   : C  *  A  M  G  *  N  *  P  C  P  R  L  W  C  C  Y  K  I  F  T  Q  E  :  W  S  T  E  V  F  K  S  A  R  F  Q  H  C  W  L  W  L  H  H  L  Y  R  E  L  W  G  L  G  *  I  C  C  F  C  H  I  R  E  R :   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S  :  S  Y  K  K  K  K </second_frame>
            <third_frame>   K  R  K  N  T  I  T  H  N  *  P  S  F  F  Y  F  S  S  I  *  C  A  A  A  S  A  L  S  F  T  I  S  V  I  N  N  S  N  R  H  I  F  F  V  T  I  F  I  F  F  L  I  S  N  F  P  F  F  V  W  A  H  N  P  R  R  L  P  L  N  V  I  *  E  K  K  K  L  Y  I  Y  I  L  G  V  M  Y  S  N  T  A  R  K  Y  S  S  S  A  A  S  S  L  L  R  A  S  S  S  V  T  R  P  L  A  S  T  S  T  A  A  H  A  P  C  R  A  G  A  A  S  G  N  Q  Q  R  Y  S  S  T  L  R  S  L  R  C  S  V  P  R  W  S  H  G  V  D  W  K  S  P  I  S  L  T  A  Q  I  R  T  A  A  P  A  L  N  G  F  H  R  K  L  A  T  M   : A  A  E  N  P  F  K  G  I  L  T  G  L  P  K  P  G  G  G  E  F  G  K  F  Y  S  L  P  A  L  N  D  P  R  I   : D  K  L  P  Y  S  I  R  I  L  L  E  S  A  I  R  N  C  D  N  F  Q  V  K  K  E  D  V  E  K  I  I  D  W  E  N  S  A  P  K  L  V  E  I  P  F  K  P  A  R  V  L  L  Q  :  D  F  T  G  V  P  A  V  V  D  L  A  C  M  R  D  A  M  N  N  L  G  S  D  S  D  K  I  N  P  L  :  V  P  V  D  L  V  I  D  H  S  V  Q  V  D  V  T  R  S  E  N  A  V  Q  A  N  M  E  L  E  F  Q  R  N  K  E  R  F  A  F  L  K  W  G  S  N  A  F  Q  N  M  L  V  V  P  P  G  S  G  I  V  H  Q  :  V  N  L  E  Y  L  G  R  V  V  F  N  R  E  G  L  L  Y  P  D  S  V  V  G  T  D  S  H  T  T  M  I  D  G  L  G  V  A  G  W  G  V  G  G  I  E  A  E  A  A  M  L  G  Q  :  P  M  S  M  V  L  P  G  V  V  G  F  K  L  S  G  N  L  R  N  G  V  T  A  T  D  L  V  L  T  V  T  Q  M  L  R  K  H  G  V  V  G  K  F  V  E  F  Y   : G  E  G  M  S  G  L  S  L  A  D  R  A  T  I  A  N  M  A  P  E  Y  G  A  T  M  G  F  F  P  V  D  H  V  T  L  Q  Y  L  K  L  T  G  R  S  D  E  T  :  V  G  M  V  E  S  Y  L  R  A  N  N  M  F  V  D  Y  K  E  :  P  Q  Q  E  K  V  Y  S  S  Y  L  N  L  D  L  A  D  V  E  P  C  L  S  G  P  K  R :   P  H  D  R  V  P  L  K  E  M  K  S  D  W  H  A  C  L  D  N  K  V  G  F  K  :  G  F  A  V  P  K  E  V  Q  D  K  V  A  K  F  S  F  H  G  Q  P  A  E  L  K  H  G  S  V  V  I  A  A  I  T  S  C  T  N  T  S  N  P  S  V  M  L  G  A  A  L  V  A  K  K  A  S  E  L  G  L  H  :  V  K  P  W  V  K  T  S  L  A  P  G  S  G  V  V  T  K  Y  L  L  K  S :   G  L  Q  K  Y  L  N  Q  Q  G  F  N  I  V  G  Y  G  C  T  T  C  I  G  N  S  G  D  L  D  E  S  V  A  S  A  I  S  E  N   : D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L  H :   P  I  R  K  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23032" stop="22702"/>
                    <exon start="22286" stop="22182"/>
                    <exon start="22091" stop="21931"/>
                    <exon start="21840" stop="21748"/>
                    <exon start="21521" stop="21336"/>
                    <exon start="21117" stop="20956"/>
                    <exon start="20023" stop="19879"/>
                    <exon start="19778" stop="19636"/>
                    <exon start="19545" stop="19489"/>
                    <exon start="19397" stop="19318"/>
                    <exon start="19230" stop="19155"/>
                    <exon start="19011" stop="18826"/>
                    <exon start="18740" stop="18673"/>
                    <exon start="18577" stop="18459"/>
                    <exon start="18348" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16406" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2934</number_coding_nucleotides>
                  <number_encoded_amino_acids>978</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKKLYIYILGVMYSNTARKYSSSAASSLLRASSSVTRPLASTSTAAHAPCRAGAASGNQQRYSSTLRSLRCSVPRWSHGVDWKSPISLTAQIRTAAPALNGFHRKLATMAAENPFKGILTGLPKPGGGEFGKFYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSAPKLVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGSDSDKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFQRNKERFAFLKWGSNAFQNMLVVPPGSGIVHQVNLEYLGRVVFNREGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGNLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSGLSLADRATIANMAPEYGATMGFFPVDHVTLQYLKLTGRSDETVGMVESYLRANNMFVDYKEPQQEKVYSSYLNLDLADVEPCLSGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAVPKEVQDKVAKFSFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="23252" e_stop="22702"/>
            <exon e_start="22286" e_stop="22254"/>
            <exon e_start="18858" e_stop="18826"/>
            <exon e_start="18740" e_stop="18673"/>
            <exon e_start="18577" e_stop="18459"/>
            <exon e_start="18348" e_stop="18227"/>
            <exon e_start="17467" e_stop="17369"/>
            <exon e_start="17290" e_stop="16811"/>
            <exon e_start="16687" e_stop="16589"/>
            <exon e_start="16493" e_stop="16251"/>
            <exon e_start="15183" e_stop="14855"/>
            <exon e_start="14645" e_stop="14613"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="0.994"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.392" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.611"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="23252" e_stop="22702" e_length="551"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22701" i_stop="22287" i_length="415"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22286" e_stop="22254" e_length="33"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22253" i_stop="18859" i_length="3395"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18858" e_stop="18826" e_length="33"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="18825" i_stop="18741" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18740" e_stop="18673" e_length="68"/>
          </exon>
          <intron i_serial="4" don_prob="0.392" acc_prob="0.931">
            <gDNA_intron_boundary i_start="18672" i_stop="18578" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18577" e_stop="18459" e_length="119"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18458" i_stop="18349" i_length="110"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="18348" e_stop="18227" e_length="122"/>
          </exon>
          <intron i_serial="6" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="17467" e_stop="17369" e_length="99"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.779">
            <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="17290" e_stop="16811" e_length="480"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="16687" e_stop="16589" e_length="99"/>
          </exon>
          <intron i_serial="9" don_prob="0.908" acc_prob="0.832">
            <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="16493" e_stop="16251" e_length="243"/>
          </exon>
          <intron i_serial="10" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="15183" e_stop="14855" e_length="329"/>
          </exon>
          <intron i_serial="11" don_prob="0.934" acc_prob="0.798">
            <gDNA_intron_boundary i_start="14854" i_stop="14646" i_length="209"/>
          </intron>
          <exon e_serial="12" e_score="0.611">
            <gDNA_exon_boundary e_start="14645" e_stop="14613" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23252" stop="22786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22839" stop="22702"/>
              <exon start="22286" stop="22254"/>
              <exon start="18858" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434759" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22839" stop="22702"/>
              <exon start="22286" stop="22254"/>
              <exon start="18858" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18852" stop="18826"/>
              <exon start="18740" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18678" stop="18673"/>
              <exon start="18577" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18540" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18518" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18516" stop="18459"/>
              <exon start="18348" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18310" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18256" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18244" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17466" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17449" stop="17369"/>
              <exon start="17290" stop="16815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17444" stop="17369"/>
              <exon start="17290" stop="16883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17441" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17425" stop="17369"/>
              <exon start="17290" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17422" stop="17369"/>
              <exon start="17290" stop="16928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17387" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485483" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16811"/>
              <exon start="16687" stop="16637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17192" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17144" stop="16811"/>
              <exon start="16687" stop="16636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17135" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17047" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16982" stop="16811"/>
              <exon start="16687" stop="16650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16951" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16927" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16917" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585628" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16905" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16839" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539494" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16619" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14645" stop="14613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434760" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16592" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16428" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16390" stop="16251"/>
              <exon start="15183" stop="15057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14645" stop="14634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16356" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247229" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15151" stop="14855"/>
              <exon start="14645" stop="14628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAACGAAAAAACACCATAACGCATAATTAGCCAAGCTTTTTTTATTTTAGCTCCATTTGATGTGCCGCAGCTTCGGCACTGTCCTTTACCATATCAGTAATCAATAATTCAAATCGCCATATCTTCTTCGTCACTATCTTCATCTTCTTCCTCATCAGCAATTTCCCTTTTTTTGTTTGGGCACACAACCCTAGGAGGTTACCATTGAATGTGATTTGAGAAAAAAAAAAACTATATATATACATATTGGGAGTCATGTATAGTAATACAGCTCGCAAGTACTCTTCTTCTGCTGCTTCTTCATTATTGAGAGCATCTTCTTCTGTTACAAGGCCGCTTGCTTCAACTTCTACTGCTGCTCACGCGCCTTGTCGTGCTGGTGCTGCTTCTGGTAATCAGCAGCGTTATTCATCAACGCTTCGGTCTCTGCGTTGCTCTGTGCCGAGGTGGAGTCACGGTGTTGATTGGAAGTCTCCGATCAGTCTTACTGCTCAGATCAGGACTGCTGCCCCTGCTCTCAACGGGTTTCATCGGAAACTAGCTACCATGG : CTGCAGAGAACCCATTTAAGGGAATCCTCACTG : GTTGCCAAAAAGGCATCTGAGCTGGGTCTACAT : GTTAAGCCATGGGTTAAAACTAGCCTTGCCCCAGGCTCTGGTGTTGTTACAAAATATTTACTCAAGAG : TGGTCTACAGAAGTATTTAAATCAGCAAGGTTTCAACATTGTTGGCTATGGCTGCACCACTTGTATAGGGAACTCTGGGGACTTGGATGAATCTGTTGCTTCTGCCATATCAGAGAACG : ACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA : TCCTATAAGAAAAAGAAAATCTGTCGAGGGTCA</gDNA_template>
            <first_frame> K  T  K  K  H  H  N  A  *  L  A  K  L  F  L  F  *  L  H  L  M  C  R  S  F  G  T  V  L  Y  H  I  S  N  Q  *  F  K  S  P  Y  L  L  R  H  Y  L  H  L  L  P  H  Q  Q  F  P  F  F  C  L  G  T  Q  P  *  E  V  T  I  E  C  D  L  R  K  K  K  T  I  Y  I  H  I  G  S  H  V  *  *  Y  S  S  Q  V  L  F  F  C  C  F  F  I  I  E  S  I  F  F  C  Y  K  A  A  C  F  N  F  Y  C  C  S  R  A  L  S  C  W  C  C  F  W  *  S  A  A  L  F  I  N  A  S  V  S  A  L  L  C  A  E  V  E  S  R  C  *  L  E  V  S  D  Q  S  Y  C  S  D  Q  D  C  C  P  C  S  Q  R  V  S  S  E  T  S  Y  H  G :   C  R  E  P  I  *  G  N  P  H  W :   L  P  K  R  H  L  S  W  V  Y  M :   L  S  H  G  L  K  L  A  L  P  Q  A  L  V  L  L  Q  N  I  Y  S  R   : V  V  Y  R  S  I  *  I  S  K  V  S  T  L  L  A  M  A  A  P  L  V  *  G  T  L  G  T  W  M  N  L  L  L  L  P  Y  Q  R  T  :  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   E  L  K  L  *  L  L  R  A  S  R  G  F  I  A  V  T  W  *  E  W  V  L  C  L  Y  V  L  R  L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F   : I  L  *  E  K  E  N  L  S  R  V  </first_frame>
            <second_frame>  K  R  K  N  T  I  T  H  N  *  P  S  F  F  Y  F  S  S  I  *  C  A  A  A  S  A  L  S  F  T  I  S  V  I  N  N  S  N  R  H  I  F  F  V  T  I  F  I  F  F  L  I  S  N  F  P  F  F  V  W  A  H  N  P  R  R  L  P  L  N  V  I  *  E  K  K  K  L  Y  I  Y  I  L  G  V  M  Y  S  N  T  A  R  K  Y  S  S  S  A  A  S  S  L  L  R  A  S  S  S  V  T  R  P  L  A  S  T  S  T  A  A  H  A  P  C  R  A  G  A  A  S  G  N  Q  Q  R  Y  S  S  T  L  R  S  L  R  C  S  V  P  R  W  S  H  G  V  D  W  K  S  P  I  S  L  T  A  Q  I  R  T  A  A  P  A  L  N  G  F  H  R  K  L  A  T  M   : A  A  E  N  P  F  K  G  I  L  T   : G  C  Q  K  G  I  *  A  G  S  T   : C  *  A  M  G  *  N  *  P  C  P  R  L  W  C  C  Y  K  I  F  T  Q  E  :  W  S  T  E  V  F  K  S  A  R  F  Q  H  C  W  L  W  L  H  H  L  Y  R  E  L  W  G  L  G  *  I  C  C  F  C  H  I  R  E  R :   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  S  *  S  C  N  C  *  E  L  R  E  D  S  S  Q  *  L  G  R  N  G  Y  C  A  S  M  F  *  G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S  :  S  Y  K  K  K  K  I  C  R  G  S </second_frame>
            <third_frame>   N  E  K  T  P  *  R  I  I  S  Q  A  F  F  I  L  A  P  F  D  V  P  Q  L  R  H  C  P  L  P  Y  Q  *  S  I  I  Q  I  A  I  S  S  S  S  L  S  S  S  S  S  S  S  A  I  S  L  F  L  F  G  H  T  T  L  G  G  Y  H  *  M  *  F  E  K  K  K  N  Y  I  Y  T  Y  W  E  S  C  I  V  I  Q  L  A  S  T  L  L  L  L  L  L  H  Y  *  E  H  L  L  L  L  Q  G  R  L  L  Q  L  L  L  L  L  T  R  L  V  V  L  V  L  L  L  V  I  S  S  V  I  H  Q  R  F  G  L  C  V  A  L  C  R  G  G  V  T  V  L  I  G  S  L  R  S  V  L  L  L  R  S  G  L  L  P  L  L  S  T  G  F  I  G  N  *  L  P  W  :  L  Q  R  T  H  L  R  E  S  S  L  :  V  A  K  K  A  S  E  L  G  L  H  :  V  K  P  W  V  K  T  S  L  A  P  G  S  G  V  V  T  K  Y  L  L  K  S :   G  L  Q  K  Y  L  N  Q  Q  G  F  N  I  V  G  Y  G  C  T  T  C  I  G  N  S  G  D  L  D  E  S  V  A  S  A  I  S  E  N   : D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  G  V  K  A  V  I  A  K  S  F  E  R  I  H  R  S  N  L  V  G  M  G  I  V  P  L  C  F  K  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L  H :   P  I  R  K  R  K  S  V  E  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22710" stop="22702"/>
                    <exon start="22286" stop="22254"/>
                    <exon start="18858" stop="18826"/>
                    <exon start="18740" stop="18673"/>
                    <exon start="18577" stop="18459"/>
                    <exon start="18348" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16493" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1371</number_coding_nucleotides>
                  <number_encoded_amino_acids>457</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPWLQRTHLRESSLVAKKASELGLHVKPWVKTSLAPGSGVVTKYLLKSGLQKYLNQQGFNIVGYGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22941" stop="22711"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EHLLLLQGRLLQLLLLLTRLVVLVLLLVISSVIHQRFGLCVALCRGGVTVLIGSLRSVLLLRSGLLPLLSTGFIGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="18349" e_stop="18227"/>
            <exon e_start="17467" e_stop="17369"/>
            <exon e_start="17290" e_stop="16811"/>
            <exon e_start="16687" e_stop="16589"/>
            <exon e_start="16493" e_stop="16251"/>
            <exon e_start="15183" e_stop="14855"/>
            <exon e_start="14645" e_stop="14613"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.779" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.611"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18349" e_stop="18227" e_length="123"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18226" i_stop="17468" i_length="759"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="17467" e_stop="17369" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.779">
            <gDNA_intron_boundary i_start="17368" i_stop="17291" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="17290" e_stop="16811" e_length="480"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="16810" i_stop="16688" i_length="123"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="16687" e_stop="16589" e_length="99"/>
          </exon>
          <intron i_serial="4" don_prob="0.908" acc_prob="0.832">
            <gDNA_intron_boundary i_start="16588" i_stop="16494" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="16493" e_stop="16251" e_length="243"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="16250" i_stop="15184" i_length="1067"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15183" e_stop="14855" e_length="329"/>
          </exon>
          <intron i_serial="6" don_prob="0.934" acc_prob="0.798">
            <gDNA_intron_boundary i_start="14854" i_stop="14646" i_length="209"/>
          </intron>
          <exon e_serial="7" e_score="0.611">
            <gDNA_exon_boundary e_start="14645" e_stop="14613" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18349" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18310" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="17047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287907" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18256" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18244" stop="18227"/>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17467" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17466" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17449" stop="17369"/>
              <exon start="17290" stop="16815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17444" stop="17369"/>
              <exon start="17290" stop="16883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17441" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17425" stop="17369"/>
              <exon start="17290" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17422" stop="17369"/>
              <exon start="17290" stop="16928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E307393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17387" stop="17369"/>
              <exon start="17290" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485483" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16811"/>
              <exon start="16687" stop="16637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245553" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17227" stop="16907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17192" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17144" stop="16811"/>
              <exon start="16687" stop="16636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17135" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17047" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16982" stop="16811"/>
              <exon start="16687" stop="16650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16951" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16927" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16917" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585628" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16905" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16839" stop="16811"/>
              <exon start="16687" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539494" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16619" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14645" stop="14613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434760" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16592" stop="16589"/>
              <exon start="16493" stop="16251"/>
              <exon start="15183" stop="15156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16428" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16390" stop="16251"/>
              <exon start="15183" stop="15057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
              <exon start="14645" stop="14634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231491" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16389" stop="16251"/>
              <exon start="15183" stop="14863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16356" stop="16251"/>
              <exon start="15183" stop="14855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247229" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15151" stop="14855"/>
              <exon start="14645" stop="14628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACATTGTTGCTGCTGCTGTACTCTCCGGAAATCGGAACTTTGAGGGGCGTGTTCATGCCCTGACAAGAGCAAACTATCTTGCTTCACCTCCCTTGGTGGTTGCCTATGCTCTTGCTGGCACT : GTTGATATAGACTTTGAGAAAGATCCAATTGGAGTGGGGAAGGATGGTAAGGATGTGTACTTCAGGGATATATGGCCATCAACTGAAGAAATTGCTGAG : GTTGTTCAATCAAGTGTATTGCCAGACATGTTCAAGAGTACATATGAAGCTATCACAAAGGGAAATACCATGTGGAATGAATTATCTGTGCCAACAACAAAGCTGTACCAATGGGATCCTAAATCTACATACATCCATGAGCCACCATATTTCAAGGGTATGACCATGGATCCTCCTGGACCTCATGGAGTGAAGGATGCTTACTGCTTGCTGAACTTTGGCGACAGTATTACTACTGATCACATTTCACCTGCTGGAAGCATTCATAAAGATAGCCCTGCTGCTAGGTACCTTATGGAGCGGGGTGTCGATCGCAGGGACTTCAACTCATATGGTAGCCGTCGTGGTAATGATGAGATTATGGCTAGGGGTACTTTCGCCAATATCCGCCTTGTAAACAAGCTGTTAAACGGGGAGGTTGGTCCAAAGACGGTCCACATTCCTTCTGGAGAAAAGCTATCTGTGTTTGATGCTGCTATG : AAATACAAATCCGCTGGACAAAGCACTATTATCTTGGCTGGAGCTGAATATGGAAGTGGAAGCTCCCGAGATTGGGCTGCCAAGGGACCAATGTTGTTG : GGAGTTAAAGCTGTAATTGCTAAGAGCTTCGAGAGGATTCATCGCAGTAACTTGGTAGGAATGGGTATTGTGCCTCTATGTTTTAAGGCTGGGGAGGATGCAGATACACTTGGATTGACAGGTCAAGAGCGCTATACCATTGATCTTCCTGAAAATATTAGTGAGATCCGCCCTGGGCAAGACGTTACTGTACAAACAGATACTGGAAAATCCTTCACCTGCGTAGTGCGGTTCGACACTGAG : GTGGAGTTGGCTTATTTCAACCATGGAGGTATTCTTCAATATGTCATTCGTCAATTGACAAAGCAATGAGGATCGCTATGATTATTTGGCCACGTTTACAAAGCTGCCCGCTTAATTGTGGGAAGATGACAGAGCGTAAAGAGAGAGATCTTCTTCTCAATAGAGCAACTTGAGAAGGGAATAAATGATTTTAAAACTTTTTTATGTCCCTTTTGTTGGACAAAGTGTTGTTTATTTACTTCTAAAGGCACTGTCAAGCTAGTCTTTTTCCTGCGGATAGCATTATACCATTTTTTTTGGTAATAAAATTTAAATTGAGATTCTCTTCA : TCCTATAAGAAAAAGAAAATCTGTCGAGGGTCA</gDNA_template>
            <first_frame> D  I  V  A  A  A  V  L  S  G  N  R  N  F  E  G  R  V  H  A  L  T  R  A  N  Y  L  A  S  P  P  L  V  V  A  Y  A  L  A  G  T  :  V  D  I  D  F  E  K  D  P  I  G  V  G  K  D  G  K  D  V  Y  F  R  D  I  W  P  S  T  E  E  I  A  E  :  V  V  Q  S  S  V  L  P  D  M  F  K  S  T  Y  E  A  I  T  K  G  N  T  M  W  N  E  L  S  V  P  T  T  K  L  Y  Q  W  D  P  K  S  T  Y  I  H  E  P  P  Y  F  K  G  M  T  M  D  P  P  G  P  H  G  V  K  D  A  Y  C  L  L  N  F  G  D  S  I  T  T  D  H  I  S  P  A  G  S  I  H  K  D  S  P  A  A  R  Y  L  M  E  R  G  V  D  R  R  D  F  N  S  Y  G  S  R  R  G  N  D  E  I  M  A  R  G  T  F  A  N  I  R  L  V  N  K  L  L  N  G  E  V  G  P  K  T  V  H  I  P  S  G  E  K  L  S  V  F  D  A  A  M  :  K  Y  K  S  A  G  Q  S  T  I  I  L  A  G  A  E  Y  G  S  G  S  S  R  D  W  A  A  K  G  P  M  L  L  :  G  V  K  A  V  I  A  K  S  F  E  R  I  H  R  S  N  L  V  G  M  G  I  V  P  L  C  F  K  A  G  E  D  A  D  T  L  G  L  T  G  Q  E  R  Y  T  I  D  L  P  E  N  I  S  E  I  R  P  G  Q  D  V  T  V  Q  T  D  T  G  K  S  F  T  C  V  V  R  F  D  T  E  :  V  E  L  A  Y  F  N  H  G  G  I  L  Q  Y  V  I  R  Q  L  T  K  Q  *  G  S  L  *  L  F  G  H  V  Y  K  A  A  R  L  I  V  G  R  *  Q  S  V  K  R  E  I  F  F  S  I  E  Q  L  E  K  G  I  N  D  F  K  T  F  L  C  P  F  C  W  T  K  C  C  L  F  T  S  K  G  T  V  K  L  V  F  F  L  R  I  A  L  Y  H  F  F  W  *  *  N  L  N  *  D  S  L  H :   P  I  R  K  R  K  S  V  E  G   </first_frame>
            <second_frame>  T  L  L  L  L  L  Y  S  P  E  I  G  T  L  R  G  V  F  M  P  *  Q  E  Q  T  I  L  L  H  L  P  W  W  L  P  M  L  L  L  A  L :   L  I  *  T  L  R  K  I  Q  L  E  W  G  R  M  V  R  M  C  T  S  G  I  Y  G  H  Q  L  K  K  L  L  R :   L  F  N  Q  V  Y  C  Q  T  C  S  R  V  H  M  K  L  S  Q  R  E  I  P  C  G  M  N  Y  L  C  Q  Q  Q  S  C  T  N  G  I  L  N  L  H  T  S  M  S  H  H  I  S  R  V  *  P  W  I  L  L  D  L  M  E  *  R  M  L  T  A  C  *  T  L  A  T  V  L  L  L  I  T  F  H  L  L  E  A  F  I  K  I  A  L  L  L  G  T  L  W  S  G  V  S  I  A  G  T  S  T  H  M  V  A  V  V  V  M  M  R  L  W  L  G  V  L  S  P  I  S  A  L  *  T  S  C  *  T  G  R  L  V  Q  R  R  S  T  F  L  L  E  K  S  Y  L  C  L  M  L  L  * :   N  T  N  P  L  D  K  A  L  L  S  W  L  E  L  N  M  E  V  E  A  P  E  I  G  L  P  R  D  Q  C  C  W :   E  L  K  L  *  L  L  R  A  S  R  G  F  I  A  V  T  W  *  E  W  V  L  C  L  Y  V  L  R  L  G  R  M  Q  I  H  L  D  *  Q  V  K  S  A  I  P  L  I  F  L  K  I  L  V  R  S  A  L  G  K  T  L  L  Y  K  Q  I  L  E  N  P  S  P  A  *  C  G  S  T  L  R :   W  S  W  L  I  S  T  M  E  V  F  F  N  M  S  F  V  N  *  Q  S  N  E  D  R  Y  D  Y  L  A  T  F  T  K  L  P  A  *  L  W  E  D  D  R  A  *  R  E  R  S  S  S  Q  *  S  N  L  R  R  E  *  M  I  L  K  L  F  Y  V  P  F  V  G  Q  S  V  V  Y  L  L  L  K  A  L  S  S  *  S  F  S  C  G  *  H  Y  T  I  F  F  G  N  K  I  *  I  E  I  L  F   : I  L  *  E  K  E  N  L  S  R  V  </second_frame>
            <third_frame>   H  C  C  C  C  C  T  L  R  K  S  E  L  *  G  A  C  S  C  P  D  K  S  K  L  S  C  F  T  S  L  G  G  C  L  C  S  C  W  H   : C  *  Y  R  L  *  E  R  S  N  W  S  G  E  G  W  *  G  C  V  L  Q  G  Y  M  A  I  N  *  R  N  C  *   : G  C  S  I  K  C  I  A  R  H  V  Q  E  Y  I  *  S  Y  H  K  G  K  Y  H  V  E  *  I  I  C  A  N  N  K  A  V  P  M  G  S  *  I  Y  I  H  P  *  A  T  I  F  Q  G  Y  D  H  G  S  S  W  T  S  W  S  E  G  C  L  L  L  A  E  L  W  R  Q  Y  Y  Y  *  S  H  F  T  C  W  K  H  S  *  R  *  P  C  C  *  V  P  Y  G  A  G  C  R  S  Q  G  L  Q  L  I  W  *  P  S  W  *  *  *  D  Y  G  *  G  Y  F  R  Q  Y  P  P  C  K  Q  A  V  K  R  G  G  W  S  K  D  G  P  H  S  F  W  R  K  A  I  C  V  *  C  C  Y   : E  I  Q  I  R  W  T  K  H  Y  Y  L  G  W  S  *  I  W  K  W  K  L  P  R  L  G  C  Q  G  T  N  V  V   : G  S  *  S  C  N  C  *  E  L  R  E  D  S  S  Q  *  L  G  R  N  G  Y  C  A  S  M  F  *  G  W  G  G  C  R  Y  T  W  I  D  R  S  R  A  L  Y  H  *  S  S  *  K  Y  *  *  D  P  P  W  A  R  R  Y  C  T  N  R  Y  W  K  I  L  H  L  R  S  A  V  R  H  *   : G  G  V  G  L  F  Q  P  W  R  Y  S  S  I  C  H  S  S  I  D  K  A  M  R  I  A  M  I  I  W  P  R  L  Q  S  C  P  L  N  C  G  K  M  T  E  R  K  E  R  D  L  L  L  N  R  A  T  *  E  G  N  K  *  F  *  N  F  F  M  S  L  L  L  D  K  V  L  F  I  Y  F  *  R  H  C  Q  A  S  L  F  P  A  D  S  I  I  P  F  F  L  V  I  K  F  K  L  R  F  S  S  :  S  Y  K  K  K  K  I  C  R  G  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C07HBa0073N22.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18349" stop="18227"/>
                    <exon start="17467" stop="17369"/>
                    <exon start="17290" stop="16811"/>
                    <exon start="16687" stop="16589"/>
                    <exon start="16493" stop="16251"/>
                    <exon start="15183" stop="15115"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1110</number_coding_nucleotides>
                  <number_encoded_amino_acids>370</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIVAAAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGTVDIDFEKDPIGVGKDGKDVYFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNTMWNELSVPTTKLYQWDPKSTYIHEPPYFKGMTMDPPGPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCVVRFDTEVELAYFNHGGILQYVIRQLTKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 160 chains have been computed
$ 
$ memory statistics:
$ 262456 bytes spliced alignments in total
$ 123 spliced alignments have been stored
$ 2133 bytes was the average size of a spliced alignment
$ 14240 bytes predicted gene locations in total
$ 2 predicted gene locations have been stored
$ 7120 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 181 backtrace matrices have been allocated
$ 
$ date finished: 2008-02-20 09:03:04
-->
